mRNA_16884 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|154417
Unique Name	mRNA_16884
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|154417 vs. uniprot
Match: A0A835Z647_9STRA (RRM domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z647_9STRA)

HSP 1 Score: 332 bits (851), Expect = 1.840e-115
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 1

Query:    1 CAKGADCTWFHRTPVRSDEACVDTVKDVFGRERHKDHREDMGGVGSINSPSRTLYVGGLRMNAYQDADELERRIWQQFGEWGEVENVNIIPRLSIAFVRYRTRSSCEFAREAMFNQSLGAGEVLNLRWAYDDPNPVAQATAARGDFDATMAALHAQGAV 477
            CAKGADCTWFHRTPVRSDEACVDTVKDVFGRERHKDHREDMGGVGSINSPSRTLYVGGLRMNAYQDADELERRIWQQFGEWGEVENVNIIPRLSIAFVRYRTRSSCEFAREAMFNQSLGAGEVLNLRWAYDDPNPVAQATAARGDFDATMAALHAQGAV
Sbjct:    1 CAKGADCTWFHRTPVRSDEACVDTVKDVFGRERHKDHREDMGGVGSINSPSRTLYVGGLRMNAYQDADELERRIWQQFGEWGEVENVNIIPRLSIAFVRYRTRSSCEFAREAMFNQSLGAGEVLNLRWAYDDPNPVAQATAARGDFDATMAALHAQGAV 159

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BLAST of jgi.p|Trimin1|154417 vs. uniprot
Match: A0A7S3Y3E7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3E7_HETAK)

HSP 1 Score: 195 bits (495), Expect = 2.730e-59
Identity = 92/157 (58.60%), Postives = 108/157 (68.79%), Query Frame = 1

Query:    1 CAKGADCTWFHRTPVRSDEACVDTVKDVFGRERHKDHREDMGGVGSINSPSRTLYVGGLRMNAYQDADELERRIWQQFGEWGEVENVNIIPRLSIAFVRYRTRSSCEFAREAMFNQSLGAGEVLNLRWAYDDPNPVAQATAARGDFDATMAALHAQG 471
            C +G DC ++HR P   D+  +D   D FGRERH++HR+D GGVGS   PSRTLYVGGL    Y D D L  R+   FGEWGEVE++N IPRL IAFVRYR RS+CEFAREAM  Q+L A E+LN+RWA +DPNP AQA  A  D  A  A L  QG
Sbjct:   31 CVRGQDCVYYHRIPTPEDDRSLDRAHDCFGRERHREHRDDRGGVGSFRDPSRTLYVGGLTKAKYTDDDTLTERLHHHFGEWGEVESINFIPRLLIAFVRYRLRSACEFAREAMAGQALDARELLNVRWACEDPNPRAQAANAASDLAAVRATLRQQG 187

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BLAST of jgi.p|Trimin1|154417 vs. uniprot
Match: A0A4D9D4X5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4X5_9STRA)

HSP 1 Score: 199 bits (505), Expect = 2.610e-58
Identity = 92/157 (58.60%), Postives = 112/157 (71.34%), Query Frame = 1

Query:    1 CAKGADCTWFHRTPVRSDEACVDTVKDVFGRERHKDHREDMGGVGSINSPSRTLYVGGLRMNAYQDADELERRIWQQFGEWGEVENVNIIPRLSIAFVRYRTRSSCEFAREAMFNQSLGAGEVLNLRWAYDDPNPVAQATAARGDFDATMAALHAQG 471
            CA+GADC +FHR P   ++A    + D FGRERH  HR+DM GVGS   PSRTLYVGG+   AY D  E+E  + +QFGEWGEVE+VN +PR+S AFVR+R RS+CEFA+EAM NQ+L   E LN++WA DDPNP AQ   AR + DA M  L AQG
Sbjct:  229 CARGADCLYFHRIPTVKEDAAAGELHDCFGRERHAGHRDDMDGVGSFTRPSRTLYVGGILKAAYADQREVEAVVREQFGEWGEVEHVNFVPRISAAFVRFRLRSNCEFAKEAMANQALAGKETLNVKWAMDDPNPAAQEAVARSNLDAAMVLLQAQG 385

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BLAST of jgi.p|Trimin1|154417 vs. uniprot
Match: A0A7S2V2X8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2X8_9STRA)

HSP 1 Score: 184 bits (466), Expect = 4.060e-56
Identity = 86/140 (61.43%), Postives = 105/140 (75.00%), Query Frame = 1

Query:   52 DEACVDTVKDVFGRERHKDHREDMGGVGSINSPSRTLYVGGLRMNAYQDADELERRIWQQFGEWGEVENVNIIPRLSIAFVRYRTRSSCEFAREAMFNQSLGAGEVLNLRWAYDDPNPVAQATAARGDFDATMAALHAQG 471
            ++  +D V+D FGRERH+DHR+DMGGVGS  SPSRTLY+GGL  N Y     LE+ +   F +WGEVEN+NIIPRLSIAFVRYR R+S EFA+E+M NQ L  GE+LN+RWAYDDPNPVAQ    R + DA +  L A+G
Sbjct:    2 EDGVLDEVRDCFGRERHRDHRDDMGGVGSFLSPSRTLYIGGLVKNRYSPLKVLEKALHAHFDQWGEVENINIIPRLSIAFVRYRMRASAEFAKESMANQELDHGEILNIRWAYDDPNPVAQQAEERANADAVVVMLQARG 141

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BLAST of jgi.p|Trimin1|154417 vs. uniprot
Match: W2GE67_PHYPR (Uncharacterized protein n=13 Tax=Phytophthora TaxID=4783 RepID=W2GE67_PHYPR)

HSP 1 Score: 191 bits (484), Expect = 4.920e-56
Identity = 91/159 (57.23%), Postives = 118/159 (74.21%), Query Frame = 1

Query:    1 CAKGADCTWFHRTPVRSDEACVDTVKDVFGRERHKDHREDMGGVGSINSPSRTLYVGGLRMNAYQDA-DELERRIWQQFGEWGEVENVNIIPRLSIAFVRYRTRSSCEFAREAMFNQSLGAGEVLNLRWAYDDPNPVAQATAARGDFDATMAALHAQGA 474
            CA+GA+C+++HR P  +DE  +  + D FGRERH   R+DM GVG+    SRTLYVGGL+  + Q+A  + E  +W+QFGEWGEVEN+N+I R SI FVRYR R+S EFA+EAM NQSL + EVLN+RWA+DDPNPVA+  A R D DA +A + A+GA
Sbjct:  214 CARGAECSYYHRLPSAADETRIGMMHDCFGRERHATDRDDMAGVGNFTRNSRTLYVGGLKTTSGQEALKQQEEALWKQFGEWGEVENINVINRKSICFVRYRHRTSAEFAKEAMANQSLQSDEVLNVRWAFDDPNPVAKQAAERSDRDAIVAMMKAKGA 372

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BLAST of jgi.p|Trimin1|154417 vs. uniprot
Match: A0A484E9S1_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E9S1_BRELC)

HSP 1 Score: 188 bits (477), Expect = 5.170e-55
Identity = 90/160 (56.25%), Postives = 116/160 (72.50%), Query Frame = 1

Query:    1 CAKGADCTWFHRTPVRSDEACVDTVKDVFGRERHKDHREDMGGVGSINSPSRTLYVGGLRMNAYQDADELER-RIWQQFGEWGEVENVNIIPRLSIAFVRYRTRSSCEFAREAMFNQSLGAGEVLNLRWAYDDPNPVAQATAARGDFDATMAALHAQGAV 477
            CA+GA+C+++HR P  +DE  +  + D FGRERH   R+DM GVG+    SRTLYVGG++  +  +A EL++  +W QFGEWGEVEN+N+I R SI F+RYR R S EFA+EAM NQSL   EVLN+RWA+DDPNPVAQ    R D DA +A + A+GAV
Sbjct:  211 CARGAECSYYHRLPSAADEMRIGMMHDCFGRERHATDRDDMAGVGNFTRNSRTLYVGGIKSCSGHEAMELQKDALWTQFGEWGEVENINVIQRKSICFIRYRHRISAEFAKEAMSNQSLQCDEVLNVRWAFDDPNPVAQEAGDRSDRDAIIAMMQAKGAV 370

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BLAST of jgi.p|Trimin1|154417 vs. uniprot
Match: F0W3Z1_9STRA (PremRNAsplicing factor cwc2 putative n=2 Tax=Albugo TaxID=65356 RepID=F0W3Z1_9STRA)

HSP 1 Score: 187 bits (475), Expect = 8.010e-55
Identity = 90/157 (57.32%), Postives = 115/157 (73.25%), Query Frame = 1

Query:    1 CAKGADCTWFHRTPVRSDEACVDTVKDVFGRERHKDHREDMGGVGSINSPSRTLYVGGLRMNAYQDADELERRIWQQFGEWGEVENVNIIPRLSIAFVRYRTRSSCEFAREAMFNQSLGAGEVLNLRWAYDDPNPVAQATAARGDFDATMAALHAQG 471
            CA+G++C ++HR P  +DE  +  + D FGR RH   R+DM GVG+ N  SRTLYVGGLR N   D+  LE  ++++F +WGEVEN+N+I RLSI FVRYR R+S EFA+EAM NQSLG  EVLN+RWAYDDPNPVA+   AR D DA +A + A+G
Sbjct:  214 CARGSECNYYHRIPTIADETRIGMMYDCFGRARHATDRDDMTGVGNFNRNSRTLYVGGLR-NVNDDSKRLEEVLFERFTDWGEVENINVIHRLSICFVRYRYRTSAEFAKEAMGNQSLGNSEVLNIRWAYDDPNPVAKQAGARADRDAIIAMVEAKG 369

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BLAST of jgi.p|Trimin1|154417 vs. uniprot
Match: H3GD55_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GD55_PHYRM)

HSP 1 Score: 186 bits (473), Expect = 1.900e-54
Identity = 88/159 (55.35%), Postives = 116/159 (72.96%), Query Frame = 1

Query:    1 CAKGADCTWFHRTPVRSDEACVDTVKDVFGRERHKDHREDMGGVGSINSPSRTLYVGGLRMNAYQDADEL-ERRIWQQFGEWGEVENVNIIPRLSIAFVRYRTRSSCEFAREAMFNQSLGAGEVLNLRWAYDDPNPVAQATAARGDFDATMAALHAQGA 474
            CA+GA+C+++HR P  +DE  +  + D FGRERH   R+DM GVG+    SRTLYVGGL+  + ++  +  E  +W+QFGEWGEVEN+N+I R SI FVRYR R+S EFA+EAM NQS+ + EVLN+RWA+DDPNPVAQ    R D DA +A + A+GA
Sbjct:  209 CARGAECSYYHRLPAAADETRMGMMHDCFGRERHATDRDDMAGVGNFTRNSRTLYVGGLKSTSGREQVKTQEEALWKQFGEWGEVENINVIHRKSICFVRYRHRTSAEFAKEAMANQSVQSDEVLNVRWAFDDPNPVAQQAGERADHDAVVAMVQAKGA 367

[Close]

BLAST of jgi.p|Trimin1|154417 vs. uniprot
Match: A0A7S2H0G1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H0G1_9STRA)

HSP 1 Score: 189 bits (479), Expect = 2.280e-54
Identity = 89/159 (55.97%), Postives = 110/159 (69.18%), Query Frame = 1

Query:    1 CAKGADCTWFHRTPVRSD--EACVDTVKDVFGRERHKDHREDMGGVGSINSPSRTLYVGGLRMNAYQDADELERRIWQQFGEWGEVENVNIIPRLSIAFVRYRTRSSCEFAREAMFNQSLGAGEVLNLRWAYDDPNPVAQATAARGDFDATMAALHAQG 471
            CA G DC + HR PV+ D     +D + DVFGR+RHKDHR+DM GVG +  P RTLYVG L  + Y+D   LE  +W QFGEWGEVE++N+I RLSI FVRYR R   E+ +EAM NQ L  GEVLN+RWA+DDPNPVA     R D DA ++ L ++G
Sbjct:  207 CAYGKDCQYAHRIPVKDDVERMLLDELHDVFGRQRHKDHRDDMDGVGCVMKPCRTLYVGNLIKSKYKDPKALETALWTQFGEWGEVEHINLIARLSIGFVRYRYRCGAEYGKEAMSNQELEHGEVLNVRWAFDDPNPVAVEAGKRADMDAVVSMLESKG 365

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BLAST of jgi.p|Trimin1|154417 vs. uniprot
Match: A0A7R9U6K8_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6K8_9STRA)

HSP 1 Score: 187 bits (474), Expect = 2.470e-54
Identity = 83/157 (52.87%), Postives = 115/157 (73.25%), Query Frame = 1

Query:    1 CAKGADCTWFHRTPVRSDEACVDTVKDVFGRERHKDHREDMGGVGSINSPSRTLYVGGLRMNAYQDADELERRIWQQFGEWGEVENVNIIPRLSIAFVRYRTRSSCEFAREAMFNQSLGAGEVLNLRWAYDDPNPVAQATAARGDFDATMAALHAQG 471
            C KG++C++ HR P   DE  +  + D+FGRERH+DHREDM GVGS ++P RTLYV G+   +Y+  +E+E+ + + F  WGEVE++N++ R+S AFVRYR R++ EFA+EAM NQ+L A EVLN+RWA DDPNPVAQ    R + DA ++ L A+G
Sbjct:  222 CGKGSNCSYLHRLPELEDEVRIGDMHDIFGRERHRDHREDMDGVGSFDNPCRTLYVAGINKMSYKSPEEIEKSVRKHFEVWGEVEHINVVARISTAFVRYRVRAAAEFAKEAMRNQALEANEVLNVRWARDDPNPVAQEAIRRANMDAAVSMLEARG 378

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|154417 vs. uniprot

BLAST of jgi.p|Trimin1|154417 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835Z647_9STRA	1.840e-115	100.00	RRM domain-containing protein (Fragment) n=1 Tax=T...	[more]
A0A7S3Y3E7_HETAK	2.730e-59	58.60	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A4D9D4X5_9STRA	2.610e-58	58.60	Uncharacterized protein n=1 Tax=Nannochloropsis sa...	[more]
A0A7S2V2X8_9STRA	4.060e-56	61.43	Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa...	[more]
W2GE67_PHYPR	4.920e-56	57.23	Uncharacterized protein n=13 Tax=Phytophthora TaxI...	[more]
A0A484E9S1_BRELC	5.170e-55	56.25	Uncharacterized protein n=1 Tax=Bremia lactucae Ta...	[more]
F0W3Z1_9STRA	8.010e-55	57.32	PremRNAsplicing factor cwc2 putative n=2 Tax=Albug...	[more]
H3GD55_PHYRM	1.900e-54	55.35	Uncharacterized protein n=1 Tax=Phytophthora ramor...	[more]
A0A7S2H0G1_9STRA	2.280e-54	55.97	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
A0A7R9U6K8_9STRA	2.470e-54	52.87	Hypothetical protein (Fragment) n=2 Tax=Pinguiococ...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_182	contig	Contig_182:112011..115144 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|154417\|gw1.182.37.1
Description	Pre-mRNA-splicing factor cwc2. Source PGD
COG category	S
Max annot lvl	121069\|Pythiales
EggNOG OGs	COG3752@1\|root,KOG0118@1\|root,KOG0118@2759\|Eukaryota,KOG4650@2759\|Eukaryota,1MBJY@121069\|Pythiales
Evalue	6.98e-55
Seed ortholog	42099.EPrPV00000022375
Hectar predicted targeting category	other localisation
TranscriptId	154739
Track	FilteredModels1
ProteinId	154417

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|154417	gene_16884	Tribonema minus UTEX_B_3156	gene	Contig_182 112011..115144 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_16884_1	exon_16884_1	Tribonema minus UTEX_B_3156	exon	Contig_182 112011..112088 +
exon_16884_2	exon_16884_2	Tribonema minus UTEX_B_3156	exon	Contig_182 112921..113039 +
exon_16884_3	exon_16884_3	Tribonema minus UTEX_B_3156	exon	Contig_182 113667..113718 +
exon_16884_4	exon_16884_4	Tribonema minus UTEX_B_3156	exon	Contig_182 114917..115144 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_16884	CDS_16884	Tribonema minus UTEX_B_3156	CDS	Contig_182 112011..112088 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|154417	Trimin1\|154417\|gw1.182.37.1	Tribonema minus UTEX_B_3156	polypeptide	Contig_182 112011..115144 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_182:112011..115144+
coding sequence from alignment at Contig_182:112011..115144+

spliced messenger RNA

>mRNA_16884 ID=mRNA_16884|Name=jgi.p|Trimin1|154417|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=477bp|location=Sequence derived from alignment at Contig_182:112011..115144+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
TGTGCCAAGGGAGCAGACTGCACATGGTTCCACAGGACGCCCGTGCGCAG
CGACGAGGCTTGCGTGGATACAGTCAAGGATGTATTTGGGCGCGAAAGGC
ATAAAGACCACAGGGAAGACATGGGCGGCGTTGGCAGCATCAACTCCCCC
TCACGCACCCTATACGTCGGAGGCCTGCGCATGAATGCGTATCAAGACGC
TGATGAGCTGGAGAGGCGCATCTGGCAACAATTTGGGGAATGGGGAGAGG
TTGAGAACGTCAACATCATACCCCGCCTGTCGATAGCATTCGTGCGCTAC
CGCACACGCAGCAGCTGCGAATTTGCACGCGAAGCTATGTTCAACCAGAG
CCTAGGGGCGGGTGAGGTGTTGAACTTGAGATGGGCTTACGATGACCCCA
ATCCTGTGGCTCAAGCGACAGCTGCACGTGGCGATTTCGATGCCACCATG
GCTGCGCTGCATGCCCAGGGGGCAGTG

protein sequence of jgi.p|Trimin1|154417

>Trimin1|154417|gw1.182.37.1 ID=Trimin1|154417|gw1.182.37.1|Name=jgi.p|Trimin1|154417|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=159bp
CAKGADCTWFHRTPVRSDEACVDTVKDVFGRERHKDHREDMGGVGSINSP
SRTLYVGGLRMNAYQDADELERRIWQQFGEWGEVENVNIIPRLSIAFVRY
RTRSSCEFAREAMFNQSLGAGEVLNLRWAYDDPNPVAQATAARGDFDATM
AALHAQGAV

mRNA from alignment at Contig_182:112011..115144+

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_16884 ID=mRNA_16884|Name=jgi.p|Trimin1|154417|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3134bp|location=Sequence derived from alignment at Contig_182:112011..115144+ (Tribonema minus UTEX_B_3156 )
TGTGCCAAGGGAGCAGACTGCACATGGTTCCACAGGACGCCCGTGCGCAG
CGACGAGGCTTGCGTGGATACAGTCAAGGTGAGTGGTATGTATGTATGTT
GACAAGCCTAGCCTACCTACCCACCTCACAATGATCAGCACAGAAACTCA
CTGATTCTCCACAAAATCCCTGCGTTGAAGTCTGCGTATAGATTTAGGCG
TGTTGAGACGGCACTTCTTTTGTGTCTGCTTCTGCCGTTGCAGGTGCTCG
CTGCTGTGTGGTGAGAGTGCACCCACTGCACGTGCGGTGTTGCGCATGCG
ATCACTCGTGCTGAGCGTTGACGCCTGAAGCACCTTGCCCAAGTAAGCGT
GACATCACGTGTAGAGCATCACAGTTCGTGAGGTTTTCTGTTCACTGGAT
TCTCATGAAGTTGTATTGCAGTACAGGTGGCGGGACTATCCGCCTTCGGT
TATCCCACCTTGCACATCAATGAGCACGTTTCTTCTTTGAAGTGTCCTTC
TCCCTTGACATGGTACTTGAGATGTTGGAAGGTGTGATGGCACACCCTCT
GAAAAAAAAAACATTGCAAGTACATCAGCGCGTATGATGCATAGCAACGA
ATGCTGGAAGTTGGTGCTGTTGATTTTTGATGAGGGACCAAGGTTTTGTG
GCATGGAGGTGCAGAGGCTTGGCTGTTTCTAAGAGCTGTTTTTCCTGGGG
GCAGGGGGAGGGGGGGCGGTCAAGACACAAGTGCACACGCCTCTACCAGG
CATTAGCTTGTATGAAATTCACGCGCAAGCGGGAAAAATTGATCTCGAAG
GAGTGGCACAATATTGTATTGCAGATGAAGGCGAACCCTACTGTACTTGT
GGTCTGCAGCATGAGTTGTTGAGCCCATGTTTCCTATGCGCTGTGCTGGT
GATGACACAGGATGTATTTGGGCGCGAAAGGCATAAAGACCACAGGGAAG
ACATGGGCGGCGTTGGCAGCATCAACTCCCCCTCACGCACCCTATACGTC
GGAGGCCTGCGCATGAATGCGTATCAAGAGTGAGTGCGCACTGACATAAT
TCAATGTTCCTGTGAAGGGCACTCACTGTGTGCAAGCAGTGATATCATTG
TGGATCATCAGAAATGGAAGGGTCATGCTCTGCGTCAAGCCACAGCATGC
ATGCGCCAGCTCATTGCCGCGCTTTTGATGATGGCAGCTCAAGCAGTTTA
GCGATGCTTATATGTGTCCAAAGGGACCATTTGTTGACTTTTTCGACAGT
GCTGGTACTGCCTGGAACAATTTTGTTGTGTTTGCTGGGCCACTTTAGCC
ACACCTGGTGCGCTTGTGTTGCCATATCACTCTGTCAAGACATTGGCTCG
CACGCGTTTTGTGTGTGTGCAGGGGGTGATCTGCGCAGCACCGATTGCTG
CTGAGGGACACCTGGCCTGTAGGCATGCACATGGTGATTTAAATGTGATG
TTGATGCAGCAACAACATGTTGTACTTTATATATTGATGCTCTGAATAGT
TTTTGCAGCGTTGCCATACCGAACCAACTCTGTTGTGGCGTCACCGCACC
GCCCAAAATTGTCTCTCTCAATATTGCTGTACCTGCTTGGACTTCCCTGC
TGAGATTCATGCCACTTCAATTCATCACTCGCGTATTGTTTCGTCAATGC
CTGCAGCGCTGATGAGCTGGAGAGGCGCATCTGGCAACAATTTGGGGAAT
GGGGAGAGGTAAGAAAGGTGGTGTGGGTGAGGCGAGTCAACCTCAACTTG
AAGCTCAGATTGAGTCAGTCGAAGCTGAAAGCAATCCGAGGGCAAATCAA
CAACTACATTGGTCGGGCGCCTCATATTTGGTCTTTGAATGACAGGCTAA
GCAAGCATGCCACCGGTCCTGAAAGTTTGCCATGCAGGGGCATGCGTAGC
ACACAGGCATCGTGCCCCATAGCACCTTGGCTTCAGAAGTATGCTGCACT
TTGTGTGGCGGTGCGGACGATAATGCCTCTATCGACTGAGCAAATCTTGC
CTGTTGTTGATGGAGTGTCAATGGAGCATGGGCAATACATACCCAATCGC
TCTGCAAACCATGGGGCGCGACAAAAACCCATATTGAGGAACAAATACAT
CAAGTATTTGAATTTTGTCAGTCTTCTGCGGGTGCTGAGCAGATGTACTT
CTTACCAATCCTTAGTTGGGGGGGGCAATAGACAGCATGATACAGAATGA
GAGGCAGATTGTCATGCAGTGAAGCAGATGCATCACCGTTGACATCGTCG
TGAACACTGGTGCTAGCTAGCATGGTGTCAAAACATGCGCCTCATTATAC
CACAACAGAGCGATTTCCTTGATTGAAATTGCTGACATTATGTGGCTGCT
TCACCTACTTTTTTCTGCATGACGTGCACAGCCTAAGAGTCAACACTGCT
TTATGTCATCCCTGTAAAATGCCTCACTTCTATTGATTTTAGTCAATTGT
ATCAAAACATATCACCTGGTGCACTGTTGCCATGCCCTTCAAAGCCAGAA
CCCTGACTGAGAACATTGCCCGACTTGCAGGAACTGTTGCCACCGCATTC
AGCTGCTACTGCCCTTGCCCCGCAATTGCGCCTGTACCCAGTTGCGAAAA
AAAGATTCAAGTTCAAACTTGAGTTTGCAGCAATGCTCATCATAACGCCC
CAGGTTGCTGAATCTGATTTGACACCTCTGGCTCTCACCAGCAGAAGATG
TACTGCTTGCGGCTTTGAGCATTGAGAACAACTGCATCTGCCTCAGGTGG
TTTTGCAGTTCAGAGGTTGCTGCCAATACTGAAGCATGCTTTGAGCACAA
TGGCACTACTACAACAGCAACTTGAAGTTGCATTAAGGTTGCGTAGTGGT
TTTGCCGCAAACTGACGCTGCTTTGCACCTGCTCTGTGCCGCTGCCCCTG
TTGCAGGTTGAGAACGTCAACATCATACCCCGCCTGTCGATAGCATTCGT
GCGCTACCGCACACGCAGCAGCTGCGAATTTGCACGCGAAGCTATGTTCA
ACCAGAGCCTAGGGGCGGGTGAGGTGTTGAACTTGAGATGGGCTTACGAT
GACCCCAATCCTGTGGCTCAAGCGACAGCTGCACGTGGCGATTTCGATGC
CACCATGGCTGCGCTGCATGCCCAGGGGGCAGTG

Coding sequence (CDS) from alignment at Contig_182:112011..115144+

>mRNA_16884 ID=mRNA_16884|Name=jgi.p|Trimin1|154417|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=477bp|location=Sequence derived from alignment at Contig_182:112011..115144+ (Tribonema minus UTEX_B_3156 )
TGTGCCAAGGGAGCAGACTGCACATGGTTCCACAGGACGCCCGTGCGCAG
CGACGAGGCTTGCGTGGATACAGTCAAGGATGTATTTGGGCGCGAAAGGC
ATAAAGACCACAGGGAAGACATGGGCGGCGTTGGCAGCATCAACTCCCCC
TCACGCACCCTATACGTCGGAGGCCTGCGCATGAATGCGTATCAAGACGC
TGATGAGCTGGAGAGGCGCATCTGGCAACAATTTGGGGAATGGGGAGAGG
TTGAGAACGTCAACATCATACCCCGCCTGTCGATAGCATTCGTGCGCTAC
CGCACACGCAGCAGCTGCGAATTTGCACGCGAAGCTATGTTCAACCAGAG
CCTAGGGGCGGGTGAGGTGTTGAACTTGAGATGGGCTTACGATGACCCCA
ATCCTGTGGCTCAAGCGACAGCTGCACGTGGCGATTTCGATGCCACCATG
GCTGCGCTGCATGCCCAGGGGGCAGTG