mRNA_16881 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|155908 vs. uniprot
Match: A0A836CHV3_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHV3_9STRA) HSP 1 Score: 565 bits (1455), Expect = 7.960e-204 Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 1
Query: 1 VQRGKWKLGPCIVRGAFGQVHMGLNQMTGELIAVKACLTSFGNHNTANQLTNEVLLMQRCRHPNIVGYLGAELHGSWVCILQEWVPGGSICSILQNFGPFTERVTRCYAHQILQGIMYLHSCGIVHHDLKGEKQIAGDNVLVSTSGVVKIADFGTSEQVFDLQDRHTKLMGTPYFMAPEVLQRQRHGMAVDVWAFACVILQMLTGDAPWRSLLGTNKVVLALLQTMQTHRTPPLPPDISPSMRALLVECFSWDPAGRPTAKDLLQSSYFSD 813
VQRGKWKLGPCIVRGAFGQVHMGLNQMTGELIAVKACLTSFGNHNTANQLTNEVLLMQRCRHPNIVGYLGAELHGSWVCILQEWVPGGSICSILQNFGPFTERVTRCYAHQILQGIMYLHSCGIVHHDLKGEKQIAGDNVLVSTSGVVKIADFGTSEQVFDLQDRHTKLMGTPYFMAPEVLQRQRHGMAVDVWAFACVILQMLTGDAPWRSLLGTNKVVLALLQTMQTHRTPPLPPDISPSMRALLVECFSWDPAGRPTAKDLLQSSYFSD
Sbjct: 1 VQRGKWKLGPCIVRGAFGQVHMGLNQMTGELIAVKACLTSFGNHNTANQLTNEVLLMQRCRHPNIVGYLGAELHGSWVCILQEWVPGGSICSILQNFGPFTERVTRCYAHQILQGIMYLHSCGIVHHDLKGEKQIAGDNVLVSTSGVVKIADFGTSEQVFDLQDRHTKLMGTPYFMAPEVLQRQRHGMAVDVWAFACVILQMLTGDAPWRSLLGTNKVVLALLQTMQTHRTPPLPPDISPSMRALLVECFSWDPAGRPTAKDLLQSSYFSD 271
BLAST of jgi.p|Trimin1|155908 vs. uniprot
Match: A0A835Z180_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z180_9STRA) HSP 1 Score: 384 bits (986), Expect = 1.840e-132 Identity = 190/271 (70.11%), Postives = 208/271 (76.75%), Query Frame = 1
Query: 1 VQRGKWKLGPCIVRGAFGQVHMGLNQMTGELIAVKA-CLTSFGNHNTANQLTNEVLLMQRCRHPNIVGYLGAELHGSWVCILQEWVPGGSICSILQNFGPFTERVTRCYAHQILQGIMYLHSCGIVHHDLKGEKQIAGDNVLVSTSGVVKIADFGTSEQVFDLQDRHTKLMGTPYFMAPEVLQRQRHGMAVDVWAFACVILQMLTGDAPWRSLLGTNKVVLALLQTMQTHRTPPLPPDISPSMRALLVECFSWDPAGRPTAKDLLQSSYFS 810
V RG W LG I RGAFGQVHMG NQ+TGELIAV+ CL S +QL NE+ LMQRC HPNIVGYLGAELH SWVCILQEWV GGSI S+L +FG F + VT CYA Q+LQG+MYLHSCGIVH DLKG DNVL+S SGVVKIADFGTS+Q+FDLQD +L GTPYFMAPEVLQRQ HGMAVD+WAFACV+LQMLTGD PW LGT K V LLQ MQ+ R PPLPPD+ S+R LV CFSWD GRPTAK LL S YFS
Sbjct: 1 VHRGNWVLGSQIGRGAFGQVHMGHNQVTGELIAVRRLCLVSDEKRAATSQLINEIQLMQRCHHPNIVGYLGAELHTSWVCILQEWVAGGSITSMLASFGAFPQPVTHCYARQLLQGVMYLHSCGIVHRDLKG------DNVLISASGVVKIADFGTSKQLFDLQDNSAQLQGTPYFMAPEVLQRQPHGMAVDIWAFACVVLQMLTGDMPWSLALGTQKTVTQLLQIMQSERIPPLPPDLDLSLRMALVACFSWDSVGRPTAKSLLHSGYFS 265
BLAST of jgi.p|Trimin1|155908 vs. uniprot
Match: A0A835YJU3_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJU3_9STRA) HSP 1 Score: 352 bits (904), Expect = 4.460e-120 Identity = 175/264 (66.29%), Postives = 203/264 (76.89%), Query Frame = 1
Query: 13 KWKLGPCIVRGAFGQVHMGLNQMTGELIAVKACLTSFGNHNTANQLTNEVLLMQRCRHPNIVGYLGAELHGSWVCILQEWVPGGSICSILQNFGPFTERVTRCYAHQILQGIMYLHSCGIVHHDLKGEKQIAGDNVLVSTSGVVKIADFGTSEQVFDLQDRHTKLMGTPYFMAPEVLQRQRHGMAVDVWAFACVILQMLTGDAPWRSLLGTNKVVLALLQTMQTHRTPPLPPDISPSMRALLVECFSWDPAGRPTAKDLLQSSY 804
KW LGP + RGAFGQVHMGL+Q+TGE IAVKACL S G +TA++L+NE+ LMQRCRH NIV YLG EL + V I+QEWVPGGSI SIL NFG FT+ VT+CYA QIL G++YLHSCG VH DLKG DNVLVS G+VKIADFGTSEQ++DLQD L GT +FMAPEVLQRQ GMAVDVWAFAC++LQM TG+ PW S LG K + LL+ MQ HR PPLP D++P+MRA L CFSW+PA RPTAK L+ Y
Sbjct: 2 KWALGPELGRGAFGQVHMGLDQVTGEFIAVKACLISGGRSSTASKLSNEIRLMQRCRHVNIVQYLGTELSPAGVYIVQEWVPGGSITSILSNFGAFTQPVTQCYARQILHGLVYLHSCGTVHRDLKG------DNVLVSAGGIVKIADFGTSEQLYDLQDDRGHLQGTLHFMAPEVLQRQPQGMAVDVWAFACLVLQMHTGNMPWASELGARKRLPRLLRLMQAHRMPPLPNDLNPTMRAALTACFSWNPAERPTAKHLVHHGY 259
BLAST of jgi.p|Trimin1|155908 vs. uniprot
Match: A0A835ZBQ2_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBQ2_9STRA) HSP 1 Score: 294 bits (753), Expect = 5.070e-95 Identity = 155/220 (70.45%), Postives = 158/220 (71.82%), Query Frame = 1
Query: 1 VQRGKWKLGPCIVRGAFGQVHMGLNQMTGELIAVKACLTSFGNHNTANQLTNEVLLMQRCRHPNIVGYLGAELHGSWVCILQEWVPGGSICSILQNFGPFTERVTRCYAHQILQGIMYLHSCGIVHHDLKGEKQIAGDNVLVSTSGVVKIADFGTSEQVFDLQDRHTKLMGTPYFMAPEVLQRQRHGMAVDVWAFACVILQMLTGDAPWRSLLGTNKVVL 660
VQ GKWKLGPCI RGAFGQVHMGL+QMTGELIA EWVPGGSICSILQNFGPFTER+TRCYAHQILQGIMYLHSCGIVHHDLKG DNVLVSTSGVVKIADFGTSEQ FDLQDR TKLMGTPYFMAPEVLQRQRH MAVDV AFACVILQMLTGDAPWRSLLGTNK +L
Sbjct: 185 VQPGKWKLGPCIGRGAFGQVHMGLDQMTGELIA-------------------------------------------------EWVPGGSICSILQNFGPFTERITRCYAHQILQGIMYLHSCGIVHHDLKG------DNVLVSTSGVVKIADFGTSEQAFDLQDRQTKLMGTPYFMAPEVLQRQRHNMAVDVLAFACVILQMLTGDAPWRSLLGTNKDLL 349
BLAST of jgi.p|Trimin1|155908 vs. uniprot
Match: A0A835YKW2_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKW2_9STRA) HSP 1 Score: 271 bits (694), Expect = 1.910e-86 Identity = 146/274 (53.28%), Postives = 180/274 (65.69%), Query Frame = 1
Query: 16 WKLGPCIVRGAFGQVHMGLNQMTGELIAVKAC---------LTSFGNHNTANQ--LTNEVLLMQRCRHPNIVGYLGAELHGSWVCILQEWVPGGSICSILQNFGPFTERVTRCYAHQILQGIMYLHSCGIVHHDLKGEKQIAGDNVLVSTSGVVKIADFGTSEQVFDLQDRHTKLMGTPYFMAPEVLQRQRHGMAVDVWAFACVILQMLTGDAPWRSLLGTNKVVLALLQTMQT--HRTPPLPPDISPSMRALLVECFSWDPAGRPTAKDLLQS 798
W LGP I RG+FG+VHMGLNQ+TGEL+A+K C L G H A Q L EV +M + +H N V YLGAE V I Q+W+PGGSI ++L FGP +E VTR YA Q L+G+ YLH+ GIVH DLKG DN+L+ G +KIADFGTS +V D +++GTPYFMAPE+L R HG+ VD+W FAC +LQMLT PW S T+ + ALL MQ R PPLPPD+SP MRA+LV CF WDPA RPT++ LL+S
Sbjct: 2 WCLGPTIGRGSFGEVHMGLNQITGELMAIKVCALPLCVAHSLRQPGAHACAKQHSLPREVFIMSQLQHRNTVRYLGAESDDDKVYIFQQWIPGGSISALLARFGPLSEHVTRLYARQALRGLAYLHANGIVHRDLKG------DNLLIDGEGTIKIADFGTSARVPD-GAAAAEMLGTPYFMAPEMLLRCDHGLPVDIWGFACTVLQMLTNRRPWHSCRVTS--LPALLSVMQAALQRMPPLPPDMSPVMRAVLVNCFRWDPAERPTSRQLLRS 266
BLAST of jgi.p|Trimin1|155908 vs. uniprot
Match: A0A835YLS7_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLS7_9STRA) HSP 1 Score: 262 bits (669), Expect = 3.110e-84 Identity = 144/277 (51.99%), Postives = 178/277 (64.26%), Query Frame = 1
Query: 1 VQRGKWKLGPCIVRGAFGQVHMGLNQMTGELIAVKACLTSFGNHNTANQLTNEVLLMQRCRHPNIVGYLGAELHGSW--VCILQEWVPGGSICSILQNFGPFTERVTRCYAHQILQGIMYLHSCGIVHHDLKGEKQIAGDNVLVSTSGVVKIADFGTSEQVFDLQDRHTK--LMGTPYFMAPEVLQRQRHGMAVDVWAFACVILQMLTGDAPWRSLLGTNKVVLALLQTMQTHR--TPPLPPDISPSMRALLVECFSWDPAGRPTAKDLLQSSYFSD 813
VQ GKWKLG I RG+FG V+MGLN+ TG L+AVK L+ G+ ++L E+ LM+ HPNIV YLGAE+ +CI QEWVPGGS+ S+LQ FGPF+E +TR Y Q LQG+ YLHS +VH D+ G N+LV GVVK+ADFG S Q+ D L GTPYFMAPEVLQR HGM VDVW+F +LQM++G+ PW S G + ALLQ + R TPPLP D+S +RA L CF WDPA RPTA +L + S+
Sbjct: 2 VQPGKWKLGNRIARGSFGVVYMGLNEATGALMAVKV-LSLRGSDRDLHELHREMALMRAFSHPNIVSYLGAEIREEHDQLCIFQEWVPGGSVSSLLQRFGPFSEDMTRGYTRQALQGLAYLHSHHVVHRDINGS------NILVDDHGVVKLADFGASLQLSDAAGSRADGALKGTPYFMAPEVLQRSAHGMPVDVWSFGGAVLQMVSGEPPWFS-YGVS-TPYALLQALLERRGQTPPLPADLSAGLRAFLERCFRWDPAERPTAAELALDPFLSE 269
BLAST of jgi.p|Trimin1|155908 vs. uniprot
Match: A0A835YTJ7_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTJ7_9STRA) HSP 1 Score: 256 bits (655), Expect = 7.090e-82 Identity = 135/268 (50.37%), Postives = 176/268 (65.67%), Query Frame = 1
Query: 13 KWKLGPCIVRGAFGQVHMGLNQMTGELIAVKACLTSFGNHNTANQLTNEVLLMQRCRHPNIVGYLGAELHGSWVCILQEWVPGGSICSILQNFGPFTERVTRCYAHQILQGIMYLHSCGIVHHDLKGEKQIAGDNVLVSTSGVVKIADFGTSEQVFDLQDRHTKLMGTPYFMAPEVLQRQRHGMAVDVWAFACVILQMLTGDAPWRSL-LGTNKVVLALLQTMQTHRTPPLPPDISPSMRALLVECFSWDPAGRPTAKDLLQSSYFSD 813
KW+LGP I G+FG VH GL+Q+TG+LIAV + + N Q+ EV +M+R RH NIV YLGAELHGS + I ++++ GGS+ ++L+ FG T V R Y QIL+GI YLHSCG+VH DLK NVL+ T G +I+DFGTS +L T + GTP FMAPEVLQR GM VD+W F C ++QM+TG +PW L L T +LA L + R PPLPP + P++ LLV CF W+PA RPT++ LL S++FSD
Sbjct: 1 KWRLGPRIGAGSFGVVHQGLDQVTGQLIAVSS------HFNGQRQVLQEVAMMKRLRHRNIVCYLGAELHGSQLFIHEQFIAGGSLEAVLRTFGAITVSVVRRYTLQILEGISYLHSCGVVHRDLKAA------NVLIDTCGTPRISDFGTS--CINLDQSSTSMAGTPQFMAPEVLQRLDCGMPVDIWGFGCTLIQMITGHSPWHGLKLRTLPALLAALNRAE-GRMPPLPPGLDPALHVLLVSCFQWEPAQRPTSQQLLLSNFFSD 253
BLAST of jgi.p|Trimin1|155908 vs. uniprot
Match: A0A835YLD7_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLD7_9STRA) HSP 1 Score: 257 bits (656), Expect = 3.810e-81 Identity = 141/276 (51.09%), Postives = 181/276 (65.58%), Query Frame = 1
Query: 1 VQRGKWKLGPCIVRGAFGQVHMGLNQMTGELIAVKACLTSFGNHNTANQLTNEVLLMQRCRHPNIVGYLGAELH--GSWVCILQEWVPGGSICSILQNFGPFTERVTRCYAHQILQGIMYLHSCGIVHHDLKGEKQIAGDNVLVSTSGVVKIADFGTSEQVFDLQDRHT-KLMGTPYFMAPEVLQRQRHGMAVDVWAFACVILQMLTGDAPWRSLLGTNKVVLALLQTMQTHR--TPPLPPDISPSMRALLVECFSWDPAGRPTAKDLLQSSYFSD 813
V+ GKWKLG I RG+FG V+MGLN++TGEL+AVK L+ G+ +L E+ LM++ HPNIV YLGAE+ +CI QEWVPGGS+ S+L+ FGPF+E +TR Y Q L+G+ YLH +VH D+KG N+LV G VK+ADFG S V D D L GTPYFMAPEVLQR+ HG VD+W+F ILQM+TG+ PW S G + ALLQTM + PPLP ++SPS+ A+L CFSWDPA RP+A L ++ +
Sbjct: 86 VRPGKWKLGNRIARGSFGVVYMGLNEVTGELMAVKV-LSLHGSERDMRELHREMALMRQFSHPNIVSYLGAEIREEDGQLCIFQEWVPGGSVSSLLRRFGPFSEDMTRRYTRQALRGLTYLHQHQVVHRDIKGS------NILVDDRGTVKLADFGASICVSDPADAGGGALKGTPYFMAPEVLQRKPHGPLVDIWSFGGAILQMVTGEPPWYS-AGVS-TPYALLQTMLERKGQPPPLPANLSPSLAAMLRRCFSWDPALRPSAAQLELDAFLQE 352
BLAST of jgi.p|Trimin1|155908 vs. uniprot
Match: A0A836C8F1_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8F1_9STRA) HSP 1 Score: 224 bits (572), Expect = 5.950e-69 Identity = 128/294 (43.54%), Postives = 164/294 (55.78%), Query Frame = 1
Query: 10 GKWKLGPCIVRGAFG-QVHMGLNQMTGELIAVKACLTSFGNHNTAN---------QLTNEVLLMQRCRHPNIVGYLGAELHGSWVCILQEWVPGGSICSILQNFGPFTERVTRCYAHQILQGIMYLHSCGIVHHDLKGEKQIAGDNVLVSTSGVVKIADFGTSEQVFDLQ--DRHTKLM--------------GTPYFMAPEVLQRQRHGMAVDVWAFACVILQMLTGDAPWRSLLGTNKVVLALLQTMQTH--RTPPLPPDISPSMRALLVECFSWDPAGRPTAKDLLQSSYF 807
G+WK+ CI RG+FG VH+ L+Q G+L AVK + + L +E LM++ HPNIVG+L E+ + +CI QE VPGGS+ ++LQ FG E + RCYA Q L GI YLH C I H DLK N+LV V+K+ADFGTS + D D H+ + GTPYFMAPE+LQRQ HG+AVD W F +LQM++G PW K ALL+ M+ PPLPP SP +RALL CF WD A RPTA+ L + +F
Sbjct: 17 GRWKISECIARGSFGGSVHIALDQRNGQLAAVKLVPLLLRQRSDRDGXXXXXXXRALFHEAALMRQLHHPNIVGFLSVEIRNAHMCIFQELVPGGSVAALLQRFGALPEAMARCYARQALAGIEYLHKCRIAHRDLKAS------NMLVDAHSVLKLADFGTSVLLPDSSSLDSHSVSLTARTCAIPASGAVHGTPYFMAPEMLQRQAHGLAVDTWGFGGALLQMVSGAPPWSG--AGVKSPAALLRHMRARDGAPPPLPPRASPPLRALLRACFRWDAAARPTAQQLRRHEFF 302
BLAST of jgi.p|Trimin1|155908 vs. uniprot
Match: A0A7S3UV54_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UV54_HETAK) HSP 1 Score: 226 bits (576), Expect = 1.980e-67 Identity = 123/281 (43.77%), Postives = 176/281 (62.63%), Query Frame = 1
Query: 1 VQRGKWKLGPCIVRGAFGQVHMGLNQMTGELIAVKACLTSFGNHNTANQLTNEVLLMQRCRHPNIVGYLGAELHGSW--VCILQEWVPGGSICSILQNFGPFTERVTRCYAHQILQGIMYLHSCGIVHHDLKGEKQIAGDNVLVSTSGVVKIADFGTSEQVFDLQDR-------HTKLMGTPYFMAPEVLQRQRHGMAVDVWAFACVILQMLTGDAPWRSLLGTNKVVLALLQTMQTHRTPP-LPPDISPSMRALLVECFSWDPAGRPTAKDLLQSSYFSD 813
VQ G+WK+G I +G FG+V++GL + TG+LIA+K ++ G + L EV LM+ RHPNIV Y GAE+ +CI Q+WVPGGS+ S+L+ FGPF E V R Y Q+L+G+ YLH+ I+H D+KG N+LV +GVVK+ADFGTS+++ ++ D H + GTPYFMAPEV+ RQ++G D+W+ +++M TGD PW+SL N + L + + TH PP + +S +R L CF +P RP+AK LL+ + SD
Sbjct: 87 VQPGQWKIGQRIGQGKFGEVYVGLCEDTGQLIAIKI-ISLPGQTSELATLYREVDLMRSLRHPNIVSYFGAEVSEEECSLCIFQQWVPGGSVASLLKKFGPFREHVVRKYTKQLLKGLRYLHNNKIIHRDIKGA------NILVDVTGVVKLADFGTSKRL-EISDELMQETMAHGTMKGTPYFMAPEVIMRQKYGRKADIWSLGGAVMEMATGDPPWKSLQMRNPI--ELFRFIHTHTHPPNIDFSLSLPLRLFLERCFIRNPKERPSAKALLKDRFVSD 357 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|155908 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_16881 ID=mRNA_16881|Name=jgi.p|Trimin1|155908|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=813bp|location=Sequence derived from alignment at Contig_182:88829..90843- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. GTTCAGCGAGGGAAGTGGAAACTAGGCCCATGCATAGTGCGGGGTGCCTTback to top protein sequence of jgi.p|Trimin1|155908 >Trimin1|155908|gw1.182.42.1 ID=Trimin1|155908|gw1.182.42.1|Name=jgi.p|Trimin1|155908|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=271bp VQRGKWKLGPCIVRGAFGQVHMGLNQMTGELIAVKACLTSFGNHNTANQLback to top mRNA from alignment at Contig_182:88829..90843- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_16881 ID=mRNA_16881|Name=jgi.p|Trimin1|155908|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2015bp|location=Sequence derived from alignment at Contig_182:88829..90843- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_182:88829..90843- >mRNA_16881 ID=mRNA_16881|Name=jgi.p|Trimin1|155908|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=813bp|location=Sequence derived from alignment at Contig_182:88829..90843- (Tribonema minus UTEX_B_3156 )back to top |