mRNA_16881 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|155908
Unique NamemRNA_16881
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|155908 vs. uniprot
Match: A0A836CHV3_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHV3_9STRA)

HSP 1 Score: 565 bits (1455), Expect = 7.960e-204
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 1
Query:    1 VQRGKWKLGPCIVRGAFGQVHMGLNQMTGELIAVKACLTSFGNHNTANQLTNEVLLMQRCRHPNIVGYLGAELHGSWVCILQEWVPGGSICSILQNFGPFTERVTRCYAHQILQGIMYLHSCGIVHHDLKGEKQIAGDNVLVSTSGVVKIADFGTSEQVFDLQDRHTKLMGTPYFMAPEVLQRQRHGMAVDVWAFACVILQMLTGDAPWRSLLGTNKVVLALLQTMQTHRTPPLPPDISPSMRALLVECFSWDPAGRPTAKDLLQSSYFSD 813
            VQRGKWKLGPCIVRGAFGQVHMGLNQMTGELIAVKACLTSFGNHNTANQLTNEVLLMQRCRHPNIVGYLGAELHGSWVCILQEWVPGGSICSILQNFGPFTERVTRCYAHQILQGIMYLHSCGIVHHDLKGEKQIAGDNVLVSTSGVVKIADFGTSEQVFDLQDRHTKLMGTPYFMAPEVLQRQRHGMAVDVWAFACVILQMLTGDAPWRSLLGTNKVVLALLQTMQTHRTPPLPPDISPSMRALLVECFSWDPAGRPTAKDLLQSSYFSD
Sbjct:    1 VQRGKWKLGPCIVRGAFGQVHMGLNQMTGELIAVKACLTSFGNHNTANQLTNEVLLMQRCRHPNIVGYLGAELHGSWVCILQEWVPGGSICSILQNFGPFTERVTRCYAHQILQGIMYLHSCGIVHHDLKGEKQIAGDNVLVSTSGVVKIADFGTSEQVFDLQDRHTKLMGTPYFMAPEVLQRQRHGMAVDVWAFACVILQMLTGDAPWRSLLGTNKVVLALLQTMQTHRTPPLPPDISPSMRALLVECFSWDPAGRPTAKDLLQSSYFSD 271          
BLAST of jgi.p|Trimin1|155908 vs. uniprot
Match: A0A835Z180_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z180_9STRA)

HSP 1 Score: 384 bits (986), Expect = 1.840e-132
Identity = 190/271 (70.11%), Postives = 208/271 (76.75%), Query Frame = 1
Query:    1 VQRGKWKLGPCIVRGAFGQVHMGLNQMTGELIAVKA-CLTSFGNHNTANQLTNEVLLMQRCRHPNIVGYLGAELHGSWVCILQEWVPGGSICSILQNFGPFTERVTRCYAHQILQGIMYLHSCGIVHHDLKGEKQIAGDNVLVSTSGVVKIADFGTSEQVFDLQDRHTKLMGTPYFMAPEVLQRQRHGMAVDVWAFACVILQMLTGDAPWRSLLGTNKVVLALLQTMQTHRTPPLPPDISPSMRALLVECFSWDPAGRPTAKDLLQSSYFS 810
            V RG W LG  I RGAFGQVHMG NQ+TGELIAV+  CL S       +QL NE+ LMQRC HPNIVGYLGAELH SWVCILQEWV GGSI S+L +FG F + VT CYA Q+LQG+MYLHSCGIVH DLKG      DNVL+S SGVVKIADFGTS+Q+FDLQD   +L GTPYFMAPEVLQRQ HGMAVD+WAFACV+LQMLTGD PW   LGT K V  LLQ MQ+ R PPLPPD+  S+R  LV CFSWD  GRPTAK LL S YFS
Sbjct:    1 VHRGNWVLGSQIGRGAFGQVHMGHNQVTGELIAVRRLCLVSDEKRAATSQLINEIQLMQRCHHPNIVGYLGAELHTSWVCILQEWVAGGSITSMLASFGAFPQPVTHCYARQLLQGVMYLHSCGIVHRDLKG------DNVLISASGVVKIADFGTSKQLFDLQDNSAQLQGTPYFMAPEVLQRQPHGMAVDIWAFACVVLQMLTGDMPWSLALGTQKTVTQLLQIMQSERIPPLPPDLDLSLRMALVACFSWDSVGRPTAKSLLHSGYFS 265          
BLAST of jgi.p|Trimin1|155908 vs. uniprot
Match: A0A835YJU3_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJU3_9STRA)

HSP 1 Score: 352 bits (904), Expect = 4.460e-120
Identity = 175/264 (66.29%), Postives = 203/264 (76.89%), Query Frame = 1
Query:   13 KWKLGPCIVRGAFGQVHMGLNQMTGELIAVKACLTSFGNHNTANQLTNEVLLMQRCRHPNIVGYLGAELHGSWVCILQEWVPGGSICSILQNFGPFTERVTRCYAHQILQGIMYLHSCGIVHHDLKGEKQIAGDNVLVSTSGVVKIADFGTSEQVFDLQDRHTKLMGTPYFMAPEVLQRQRHGMAVDVWAFACVILQMLTGDAPWRSLLGTNKVVLALLQTMQTHRTPPLPPDISPSMRALLVECFSWDPAGRPTAKDLLQSSY 804
            KW LGP + RGAFGQVHMGL+Q+TGE IAVKACL S G  +TA++L+NE+ LMQRCRH NIV YLG EL  + V I+QEWVPGGSI SIL NFG FT+ VT+CYA QIL G++YLHSCG VH DLKG      DNVLVS  G+VKIADFGTSEQ++DLQD    L GT +FMAPEVLQRQ  GMAVDVWAFAC++LQM TG+ PW S LG  K +  LL+ MQ HR PPLP D++P+MRA L  CFSW+PA RPTAK L+   Y
Sbjct:    2 KWALGPELGRGAFGQVHMGLDQVTGEFIAVKACLISGGRSSTASKLSNEIRLMQRCRHVNIVQYLGTELSPAGVYIVQEWVPGGSITSILSNFGAFTQPVTQCYARQILHGLVYLHSCGTVHRDLKG------DNVLVSAGGIVKIADFGTSEQLYDLQDDRGHLQGTLHFMAPEVLQRQPQGMAVDVWAFACLVLQMHTGNMPWASELGARKRLPRLLRLMQAHRMPPLPNDLNPTMRAALTACFSWNPAERPTAKHLVHHGY 259          
BLAST of jgi.p|Trimin1|155908 vs. uniprot
Match: A0A835ZBQ2_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBQ2_9STRA)

HSP 1 Score: 294 bits (753), Expect = 5.070e-95
Identity = 155/220 (70.45%), Postives = 158/220 (71.82%), Query Frame = 1
Query:    1 VQRGKWKLGPCIVRGAFGQVHMGLNQMTGELIAVKACLTSFGNHNTANQLTNEVLLMQRCRHPNIVGYLGAELHGSWVCILQEWVPGGSICSILQNFGPFTERVTRCYAHQILQGIMYLHSCGIVHHDLKGEKQIAGDNVLVSTSGVVKIADFGTSEQVFDLQDRHTKLMGTPYFMAPEVLQRQRHGMAVDVWAFACVILQMLTGDAPWRSLLGTNKVVL 660
            VQ GKWKLGPCI RGAFGQVHMGL+QMTGELIA                                                 EWVPGGSICSILQNFGPFTER+TRCYAHQILQGIMYLHSCGIVHHDLKG      DNVLVSTSGVVKIADFGTSEQ FDLQDR TKLMGTPYFMAPEVLQRQRH MAVDV AFACVILQMLTGDAPWRSLLGTNK +L
Sbjct:  185 VQPGKWKLGPCIGRGAFGQVHMGLDQMTGELIA-------------------------------------------------EWVPGGSICSILQNFGPFTERITRCYAHQILQGIMYLHSCGIVHHDLKG------DNVLVSTSGVVKIADFGTSEQAFDLQDRQTKLMGTPYFMAPEVLQRQRHNMAVDVLAFACVILQMLTGDAPWRSLLGTNKDLL 349          
BLAST of jgi.p|Trimin1|155908 vs. uniprot
Match: A0A835YKW2_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKW2_9STRA)

HSP 1 Score: 271 bits (694), Expect = 1.910e-86
Identity = 146/274 (53.28%), Postives = 180/274 (65.69%), Query Frame = 1
Query:   16 WKLGPCIVRGAFGQVHMGLNQMTGELIAVKAC---------LTSFGNHNTANQ--LTNEVLLMQRCRHPNIVGYLGAELHGSWVCILQEWVPGGSICSILQNFGPFTERVTRCYAHQILQGIMYLHSCGIVHHDLKGEKQIAGDNVLVSTSGVVKIADFGTSEQVFDLQDRHTKLMGTPYFMAPEVLQRQRHGMAVDVWAFACVILQMLTGDAPWRSLLGTNKVVLALLQTMQT--HRTPPLPPDISPSMRALLVECFSWDPAGRPTAKDLLQS 798
            W LGP I RG+FG+VHMGLNQ+TGEL+A+K C         L   G H  A Q  L  EV +M + +H N V YLGAE     V I Q+W+PGGSI ++L  FGP +E VTR YA Q L+G+ YLH+ GIVH DLKG      DN+L+   G +KIADFGTS +V D      +++GTPYFMAPE+L R  HG+ VD+W FAC +LQMLT   PW S   T+  + ALL  MQ    R PPLPPD+SP MRA+LV CF WDPA RPT++ LL+S
Sbjct:    2 WCLGPTIGRGSFGEVHMGLNQITGELMAIKVCALPLCVAHSLRQPGAHACAKQHSLPREVFIMSQLQHRNTVRYLGAESDDDKVYIFQQWIPGGSISALLARFGPLSEHVTRLYARQALRGLAYLHANGIVHRDLKG------DNLLIDGEGTIKIADFGTSARVPD-GAAAAEMLGTPYFMAPEMLLRCDHGLPVDIWGFACTVLQMLTNRRPWHSCRVTS--LPALLSVMQAALQRMPPLPPDMSPVMRAVLVNCFRWDPAERPTSRQLLRS 266          
BLAST of jgi.p|Trimin1|155908 vs. uniprot
Match: A0A835YLS7_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLS7_9STRA)

HSP 1 Score: 262 bits (669), Expect = 3.110e-84
Identity = 144/277 (51.99%), Postives = 178/277 (64.26%), Query Frame = 1
Query:    1 VQRGKWKLGPCIVRGAFGQVHMGLNQMTGELIAVKACLTSFGNHNTANQLTNEVLLMQRCRHPNIVGYLGAELHGSW--VCILQEWVPGGSICSILQNFGPFTERVTRCYAHQILQGIMYLHSCGIVHHDLKGEKQIAGDNVLVSTSGVVKIADFGTSEQVFDLQDRHTK--LMGTPYFMAPEVLQRQRHGMAVDVWAFACVILQMLTGDAPWRSLLGTNKVVLALLQTMQTHR--TPPLPPDISPSMRALLVECFSWDPAGRPTAKDLLQSSYFSD 813
            VQ GKWKLG  I RG+FG V+MGLN+ TG L+AVK  L+  G+    ++L  E+ LM+   HPNIV YLGAE+      +CI QEWVPGGS+ S+LQ FGPF+E +TR Y  Q LQG+ YLHS  +VH D+ G       N+LV   GVVK+ADFG S Q+ D         L GTPYFMAPEVLQR  HGM VDVW+F   +LQM++G+ PW S  G +    ALLQ +   R  TPPLP D+S  +RA L  CF WDPA RPTA +L    + S+
Sbjct:    2 VQPGKWKLGNRIARGSFGVVYMGLNEATGALMAVKV-LSLRGSDRDLHELHREMALMRAFSHPNIVSYLGAEIREEHDQLCIFQEWVPGGSVSSLLQRFGPFSEDMTRGYTRQALQGLAYLHSHHVVHRDINGS------NILVDDHGVVKLADFGASLQLSDAAGSRADGALKGTPYFMAPEVLQRSAHGMPVDVWSFGGAVLQMVSGEPPWFS-YGVS-TPYALLQALLERRGQTPPLPADLSAGLRAFLERCFRWDPAERPTAAELALDPFLSE 269          
BLAST of jgi.p|Trimin1|155908 vs. uniprot
Match: A0A835YTJ7_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTJ7_9STRA)

HSP 1 Score: 256 bits (655), Expect = 7.090e-82
Identity = 135/268 (50.37%), Postives = 176/268 (65.67%), Query Frame = 1
Query:   13 KWKLGPCIVRGAFGQVHMGLNQMTGELIAVKACLTSFGNHNTANQLTNEVLLMQRCRHPNIVGYLGAELHGSWVCILQEWVPGGSICSILQNFGPFTERVTRCYAHQILQGIMYLHSCGIVHHDLKGEKQIAGDNVLVSTSGVVKIADFGTSEQVFDLQDRHTKLMGTPYFMAPEVLQRQRHGMAVDVWAFACVILQMLTGDAPWRSL-LGTNKVVLALLQTMQTHRTPPLPPDISPSMRALLVECFSWDPAGRPTAKDLLQSSYFSD 813
            KW+LGP I  G+FG VH GL+Q+TG+LIAV +      + N   Q+  EV +M+R RH NIV YLGAELHGS + I ++++ GGS+ ++L+ FG  T  V R Y  QIL+GI YLHSCG+VH DLK        NVL+ T G  +I+DFGTS    +L    T + GTP FMAPEVLQR   GM VD+W F C ++QM+TG +PW  L L T   +LA L   +  R PPLPP + P++  LLV CF W+PA RPT++ LL S++FSD
Sbjct:    1 KWRLGPRIGAGSFGVVHQGLDQVTGQLIAVSS------HFNGQRQVLQEVAMMKRLRHRNIVCYLGAELHGSQLFIHEQFIAGGSLEAVLRTFGAITVSVVRRYTLQILEGISYLHSCGVVHRDLKAA------NVLIDTCGTPRISDFGTS--CINLDQSSTSMAGTPQFMAPEVLQRLDCGMPVDIWGFGCTLIQMITGHSPWHGLKLRTLPALLAALNRAE-GRMPPLPPGLDPALHVLLVSCFQWEPAQRPTSQQLLLSNFFSD 253          
BLAST of jgi.p|Trimin1|155908 vs. uniprot
Match: A0A835YLD7_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLD7_9STRA)

HSP 1 Score: 257 bits (656), Expect = 3.810e-81
Identity = 141/276 (51.09%), Postives = 181/276 (65.58%), Query Frame = 1
Query:    1 VQRGKWKLGPCIVRGAFGQVHMGLNQMTGELIAVKACLTSFGNHNTANQLTNEVLLMQRCRHPNIVGYLGAELH--GSWVCILQEWVPGGSICSILQNFGPFTERVTRCYAHQILQGIMYLHSCGIVHHDLKGEKQIAGDNVLVSTSGVVKIADFGTSEQVFDLQDRHT-KLMGTPYFMAPEVLQRQRHGMAVDVWAFACVILQMLTGDAPWRSLLGTNKVVLALLQTMQTHR--TPPLPPDISPSMRALLVECFSWDPAGRPTAKDLLQSSYFSD 813
            V+ GKWKLG  I RG+FG V+MGLN++TGEL+AVK  L+  G+     +L  E+ LM++  HPNIV YLGAE+      +CI QEWVPGGS+ S+L+ FGPF+E +TR Y  Q L+G+ YLH   +VH D+KG       N+LV   G VK+ADFG S  V D  D     L GTPYFMAPEVLQR+ HG  VD+W+F   ILQM+TG+ PW S  G +    ALLQTM   +   PPLP ++SPS+ A+L  CFSWDPA RP+A  L   ++  +
Sbjct:   86 VRPGKWKLGNRIARGSFGVVYMGLNEVTGELMAVKV-LSLHGSERDMRELHREMALMRQFSHPNIVSYLGAEIREEDGQLCIFQEWVPGGSVSSLLRRFGPFSEDMTRRYTRQALRGLTYLHQHQVVHRDIKGS------NILVDDRGTVKLADFGASICVSDPADAGGGALKGTPYFMAPEVLQRKPHGPLVDIWSFGGAILQMVTGEPPWYS-AGVS-TPYALLQTMLERKGQPPPLPANLSPSLAAMLRRCFSWDPALRPSAAQLELDAFLQE 352          
BLAST of jgi.p|Trimin1|155908 vs. uniprot
Match: A0A836C8F1_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8F1_9STRA)

HSP 1 Score: 224 bits (572), Expect = 5.950e-69
Identity = 128/294 (43.54%), Postives = 164/294 (55.78%), Query Frame = 1
Query:   10 GKWKLGPCIVRGAFG-QVHMGLNQMTGELIAVKACLTSFGNHNTAN---------QLTNEVLLMQRCRHPNIVGYLGAELHGSWVCILQEWVPGGSICSILQNFGPFTERVTRCYAHQILQGIMYLHSCGIVHHDLKGEKQIAGDNVLVSTSGVVKIADFGTSEQVFDLQ--DRHTKLM--------------GTPYFMAPEVLQRQRHGMAVDVWAFACVILQMLTGDAPWRSLLGTNKVVLALLQTMQTH--RTPPLPPDISPSMRALLVECFSWDPAGRPTAKDLLQSSYF 807
            G+WK+  CI RG+FG  VH+ L+Q  G+L AVK         +  +          L +E  LM++  HPNIVG+L  E+  + +CI QE VPGGS+ ++LQ FG   E + RCYA Q L GI YLH C I H DLK        N+LV    V+K+ADFGTS  + D    D H+  +              GTPYFMAPE+LQRQ HG+AVD W F   +LQM++G  PW       K   ALL+ M+      PPLPP  SP +RALL  CF WD A RPTA+ L +  +F
Sbjct:   17 GRWKISECIARGSFGGSVHIALDQRNGQLAAVKLVPLLLRQRSDRDGXXXXXXXRALFHEAALMRQLHHPNIVGFLSVEIRNAHMCIFQELVPGGSVAALLQRFGALPEAMARCYARQALAGIEYLHKCRIAHRDLKAS------NMLVDAHSVLKLADFGTSVLLPDSSSLDSHSVSLTARTCAIPASGAVHGTPYFMAPEMLQRQAHGLAVDTWGFGGALLQMVSGAPPWSG--AGVKSPAALLRHMRARDGAPPPLPPRASPPLRALLRACFRWDAAARPTAQQLRRHEFF 302          
BLAST of jgi.p|Trimin1|155908 vs. uniprot
Match: A0A7S3UV54_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UV54_HETAK)

HSP 1 Score: 226 bits (576), Expect = 1.980e-67
Identity = 123/281 (43.77%), Postives = 176/281 (62.63%), Query Frame = 1
Query:    1 VQRGKWKLGPCIVRGAFGQVHMGLNQMTGELIAVKACLTSFGNHNTANQLTNEVLLMQRCRHPNIVGYLGAELHGSW--VCILQEWVPGGSICSILQNFGPFTERVTRCYAHQILQGIMYLHSCGIVHHDLKGEKQIAGDNVLVSTSGVVKIADFGTSEQVFDLQDR-------HTKLMGTPYFMAPEVLQRQRHGMAVDVWAFACVILQMLTGDAPWRSLLGTNKVVLALLQTMQTHRTPP-LPPDISPSMRALLVECFSWDPAGRPTAKDLLQSSYFSD 813
            VQ G+WK+G  I +G FG+V++GL + TG+LIA+K  ++  G  +    L  EV LM+  RHPNIV Y GAE+      +CI Q+WVPGGS+ S+L+ FGPF E V R Y  Q+L+G+ YLH+  I+H D+KG       N+LV  +GVVK+ADFGTS+++ ++ D        H  + GTPYFMAPEV+ RQ++G   D+W+    +++M TGD PW+SL   N +   L + + TH  PP +   +S  +R  L  CF  +P  RP+AK LL+  + SD
Sbjct:   87 VQPGQWKIGQRIGQGKFGEVYVGLCEDTGQLIAIKI-ISLPGQTSELATLYREVDLMRSLRHPNIVSYFGAEVSEEECSLCIFQQWVPGGSVASLLKKFGPFREHVVRKYTKQLLKGLRYLHNNKIIHRDIKGA------NILVDVTGVVKLADFGTSKRL-EISDELMQETMAHGTMKGTPYFMAPEVIMRQKYGRKADIWSLGGAVMEMATGDPPWKSLQMRNPI--ELFRFIHTHTHPPNIDFSLSLPLRLFLERCFIRNPKERPSAKALLKDRFVSD 357          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|155908 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CHV3_9STRA7.960e-204100.00Kinase-like domain-containing protein (Fragment) n... [more]
A0A835Z180_9STRA1.840e-13270.11Kinase-like domain-containing protein (Fragment) n... [more]
A0A835YJU3_9STRA4.460e-12066.29Kinase-like domain-containing protein (Fragment) n... [more]
A0A835ZBQ2_9STRA5.070e-9570.45Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A835YKW2_9STRA1.910e-8653.28Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A835YLS7_9STRA3.110e-8451.99Kinase-like domain-containing protein (Fragment) n... [more]
A0A835YTJ7_9STRA7.090e-8250.37Kinase-like domain-containing protein (Fragment) n... [more]
A0A835YLD7_9STRA3.810e-8151.09Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A836C8F1_9STRA5.950e-6943.54Kinase-like domain-containing protein (Fragment) n... [more]
A0A7S3UV54_HETAK1.980e-6743.77Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_182contigContig_182:88829..90843 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|155908|gw1.182.42.1
BRITEko00000,ko00001,ko01000,ko01001
KEGG Pathwayko04016,map04016
KEGG koko:K20606
EC2.7.11.25
GOsGO:0000165,GO:0000186,GO:0000226,GO:0001932,GO:0001934,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004709,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0006996,GO:0007010,GO:0007017,GO:0007154,GO:0007165,GO:0007346,GO:0008150,GO:0008152,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0010562,GO:0010604,GO:0010646,GO:0010647,GO:0016043,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019220,GO:0019222,GO:0019538,GO:0023014,GO:0023051,GO:0023052,GO:0023056,GO:0030865,GO:0031098,GO:0031122,GO:0031323,GO:0031325,GO:0031399,GO:0031401,GO:0032147,GO:0032268,GO:0032270,GO:0033554,GO:0033674,GO:0035556,GO:0036211,GO:0042325,GO:0042327,GO:0043085,GO:0043170,GO:0043405,GO:0043406,GO:0043408,GO:0043410,GO:0043412,GO:0043549,GO:0043622,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0045859,GO:0045860,GO:0045937,GO:0046777,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051174,GO:0051246,GO:0051247,GO:0051338,GO:0051347,GO:0051716,GO:0051726,GO:0060255,GO:0065007,GO:0065009,GO:0071704,GO:0071840,GO:0071900,GO:0071902,GO:0080090,GO:0097435,GO:0140096,GO:1901564,GO:1902531,GO:1902533
Descriptionkinase kinase kinase
COG categoryT
Max annot lvl35493|Streptophyta
EggNOG OGsKOG0198@1|root,KOG0198@2759|Eukaryota,37MNP@33090|Viridiplantae,3GDP7@35493|Streptophyta,3HWGV@3699|Brassicales
Evalue4.52e-61
Seed ortholog28532.XP_010528878.1
Hectar predicted targeting categoryother localisation
TranscriptId156230
TrackFilteredModels1
ProteinId155908
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|155908gene_16881Tribonema minus UTEX_B_3156 geneContig_182 88829..90843 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|155908Trimin1|155908|gw1.182.42.1Tribonema minus UTEX_B_3156 polypeptideContig_182 88829..90843 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_16881_3exon_16881_3Tribonema minus UTEX_B_3156 exonContig_182 88829..89232 -
exon_16881_2exon_16881_2Tribonema minus UTEX_B_3156 exonContig_182 90027..90336 -
exon_16881_1exon_16881_1Tribonema minus UTEX_B_3156 exonContig_182 90745..90843 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_16881CDS_16881Tribonema minus UTEX_B_3156 CDSContig_182 90745..90843 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_16881 ID=mRNA_16881|Name=jgi.p|Trimin1|155908|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=813bp|location=Sequence derived from alignment at Contig_182:88829..90843- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GTTCAGCGAGGGAAGTGGAAACTAGGCCCATGCATAGTGCGGGGTGCCTT
CGGTCAGGTGCACATGGGCCTCAATCAGATGACAGGGGAGCTCATTGCGG
TCAAAGCTTGTTTAACGTCGTTTGGAAATCACAACACGGCCAACCAGCTC
ACCAACGAGGTCCTTCTCATGCAACGCTGCCGTCACCCAAACATCGTAGG
CTACCTGGGTGCAGAGCTGCACGGATCCTGGGTCTGCATCTTGCAGGAGT
GGGTCCCTGGTGGCAGCATTTGCAGCATCCTTCAGAACTTTGGCCCGTTC
ACGGAGCGCGTCACCCGCTGCTACGCACACCAGATACTACAAGGCATCAT
GTACCTTCACAGCTGCGGCATCGTCCACCATGACCTGAAAGGCGAGAAGC
AGATTGCTGGCGACAATGTGCTTGTCAGCACCAGCGGCGTAGTGAAGATT
GCCGACTTTGGCACCAGCGAGCAGGTCTTTGACTTGCAGGACCGCCACAC
CAAGCTGATGGGAACGCCGTACTTCATGGCGCCAGAGGTGCTGCAGCGCC
AGCGCCACGGCATGGCTGTCGACGTGTGGGCCTTTGCCTGCGTCATCCTT
CAGATGCTCACTGGCGACGCGCCTTGGAGGTCGTTGCTGGGCACGAACAA
GGTGGTGTTGGCACTGCTGCAGACAATGCAGACCCACCGCACACCTCCGC
TGCCGCCGGACATCAGCCCCTCCATGCGCGCCCTCCTTGTCGAATGCTTC
AGCTGGGATCCTGCTGGCCGCCCCACCGCCAAGGACCTCCTTCAGTCCAG
CTACTTCAGCGAT
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protein sequence of jgi.p|Trimin1|155908

>Trimin1|155908|gw1.182.42.1 ID=Trimin1|155908|gw1.182.42.1|Name=jgi.p|Trimin1|155908|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=271bp
VQRGKWKLGPCIVRGAFGQVHMGLNQMTGELIAVKACLTSFGNHNTANQL
TNEVLLMQRCRHPNIVGYLGAELHGSWVCILQEWVPGGSICSILQNFGPF
TERVTRCYAHQILQGIMYLHSCGIVHHDLKGEKQIAGDNVLVSTSGVVKI
ADFGTSEQVFDLQDRHTKLMGTPYFMAPEVLQRQRHGMAVDVWAFACVIL
QMLTGDAPWRSLLGTNKVVLALLQTMQTHRTPPLPPDISPSMRALLVECF
SWDPAGRPTAKDLLQSSYFSD
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mRNA from alignment at Contig_182:88829..90843-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_16881 ID=mRNA_16881|Name=jgi.p|Trimin1|155908|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2015bp|location=Sequence derived from alignment at Contig_182:88829..90843- (Tribonema minus UTEX_B_3156 )
GTTCAGCGAGGGAAGTGGAAACTAGGCCCATGCATAGTGCGGGGTGCCTT CGGTCAGGTGCACATGGGCCTCAATCAGATGACAGGGGAGCTCATTGCGG TAAGCACGGCCCTCGATCTTCAAGCACTGCGCCCCGTATATCCCCCTTCA TCGCGCTTGGGTTTGAGTGCCTCGAGATATGACATCGTGTCATATGCCCT TTGCACCTGAGCCACCTGACAGCTAGCTACTGCATAATGCAGTGCCATCT GCGTGTACATATGTCTACGTCAGTCTTGTGAAACGAATTGCTACTGCTGG CAATTTGCTGCGGCCACAGTGGGCAACGCTGCCACTGCTGCTGCAGTAGA GAGTGCTACTGCTGTACAGCGCTTCCGTTGCACGTCTCGTTCAGCCTTGG AAGCTTGGTGCATGCTCGACCGTCAGTGACCGTACTACTAGTAGGCTGCT GCTGCAACACAGCCAACCAGCTCATTGCTGCTGCTGCACCGCTACCGCAC ACCTCAGGTCAAAGCTTGTTTAACGTCGTTTGGAAATCACAACACGGCCA ACCAGCTCACCAACGAGGTCCTTCTCATGCAACGCTGCCGTCACCCAAAC ATCGTAGGCTACCTGGGTGCAGAGCTGCACGGATCCTGGGTCTGCATCTT GCAGGAGTGGGTCCCTGGTGGCAGCATTTGCAGCATCCTTCAGAACTTTG GCCCGTTCACGGAGCGCGTCACCCGCTGCTACGCACACCAGATACTACAA GGCATCATGTACCTTCACAGCTGCGGCATCGTCCACCATGACCTGAAAGG CGAGAAGCAGATTGCTGGTCCAATCGTGATATCATTGTAGTCATATGATA TGGACTATGTACATGAATGGTCGACTCTAATAGCTCGATTTGGTGTTGGC CCTGCTGCAGATGTGCGCCCAGGTGGTCAATGCAACGCATTGTGACCTGT ACGACAATCACAGATGCACTGACACACACTTAAGCCAAGGTGAAAGTCAA GGTGGCCTAGCACATCTCAGACATCTGCGGCTAGTAGTGCGTGCGTGAGC GGGTGGGTGAAGGCGAGGCTTGTGGCACACGGAGGCCTGTGAATTGCAGT TATGGGGTGGAGTGCATGCCAGCATCACTCTTACAGGACCCAGTAGTACT TGTGCACTTAAAAAGCCAACTGCACCTGGGCAAGCTTGCGAGCAGGCTCG CATTATAGCCACTGTTGCGCATACATGGTGGCAGGCAATGCTTTCCCCTG TTGTAGTCGCACCATTGGCAGATGTGCAATCTCACAGCAGTATGCTGAAA TGTGTAAACTGTCACAATAGTGCATGCATCACAACTTCGCTCTGTCACTG CGGCGCCGGTATGTTCTTTGCCCTTGGCACACACAACAACACTACATGAG CTTTTTTGGAAAACATACAGTCGATGATGTTGTTACTCGTGCTTGTGATA AATTGAATGATCGAATTTGCGATCCTATTAGTCATTGCCAACTCACAATG TAGAATCACGTCTCTCAGCAGCAAACTCATTTATAGAATTCAATTGCATT TGCACAAGTCTACCAAAATTGCTGCACACTTACTCTCTATTTTCGTGTGG ATCCCACACAGGCGACAATGTGCTTGTCAGCACCAGCGGCGTAGTGAAGA TTGCCGACTTTGGCACCAGCGAGCAGGTCTTTGACTTGCAGGACCGCCAC ACCAAGCTGATGGGAACGCCGTACTTCATGGCGCCAGAGGTGCTGCAGCG CCAGCGCCACGGCATGGCTGTCGACGTGTGGGCCTTTGCCTGCGTCATCC TTCAGATGCTCACTGGCGACGCGCCTTGGAGGTCGTTGCTGGGCACGAAC AAGGTGGTGTTGGCACTGCTGCAGACAATGCAGACCCACCGCACACCTCC GCTGCCGCCGGACATCAGCCCCTCCATGCGCGCCCTCCTTGTCGAATGCT TCAGCTGGGATCCTGCTGGCCGCCCCACCGCCAAGGACCTCCTTCAGTCC AGCTACTTCAGCGAT
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Coding sequence (CDS) from alignment at Contig_182:88829..90843-

>mRNA_16881 ID=mRNA_16881|Name=jgi.p|Trimin1|155908|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=813bp|location=Sequence derived from alignment at Contig_182:88829..90843- (Tribonema minus UTEX_B_3156 )
GTTCAGCGAGGGAAGTGGAAACTAGGCCCATGCATAGTGCGGGGTGCCTT
CGGTCAGGTGCACATGGGCCTCAATCAGATGACAGGGGAGCTCATTGCGG
TCAAAGCTTGTTTAACGTCGTTTGGAAATCACAACACGGCCAACCAGCTC
ACCAACGAGGTCCTTCTCATGCAACGCTGCCGTCACCCAAACATCGTAGG
CTACCTGGGTGCAGAGCTGCACGGATCCTGGGTCTGCATCTTGCAGGAGT
GGGTCCCTGGTGGCAGCATTTGCAGCATCCTTCAGAACTTTGGCCCGTTC
ACGGAGCGCGTCACCCGCTGCTACGCACACCAGATACTACAAGGCATCAT
GTACCTTCACAGCTGCGGCATCGTCCACCATGACCTGAAAGGCGAGAAGC
AGATTGCTGGCGACAATGTGCTTGTCAGCACCAGCGGCGTAGTGAAGATT
GCCGACTTTGGCACCAGCGAGCAGGTCTTTGACTTGCAGGACCGCCACAC
CAAGCTGATGGGAACGCCGTACTTCATGGCGCCAGAGGTGCTGCAGCGCC
AGCGCCACGGCATGGCTGTCGACGTGTGGGCCTTTGCCTGCGTCATCCTT
CAGATGCTCACTGGCGACGCGCCTTGGAGGTCGTTGCTGGGCACGAACAA
GGTGGTGTTGGCACTGCTGCAGACAATGCAGACCCACCGCACACCTCCGC
TGCCGCCGGACATCAGCCCCTCCATGCGCGCCCTCCTTGTCGAATGCTTC
AGCTGGGATCCTGCTGGCCGCCCCACCGCCAAGGACCTCCTTCAGTCCAG
CTACTTCAGCGAT
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