mRNA_16848 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|136939 vs. uniprot
Match: A0A835Z4L7_9STRA (Protein-tyrosine phosphatase-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4L7_9STRA) HSP 1 Score: 432 bits (1112), Expect = 1.540e-153 Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 1 Query: 1 TLKRRKLQGVILVSDSSPQHQTWRQAFARLLEDEKVAVVLLAEWEPFLHAYPFICHPEQIADAPYYPSEIITPAKGHGGLYLSGYQVPTNPDVLRHLNIKRIIDASTLDDIREQWAYSGIRYMTIDIEDDPDDNVAQYFPAAIAFISEGLEAGEGVLVHCMAGASRSASIVMAFIMQREGWPIERGYDYVYGNRNQVYVNLGFRRQLADWE 633 TLKRRKLQGVILVSDSSPQHQTWRQAFARLLEDEKVAVVLLAEWEPFLHAYPFICHPEQIADAPYYPSEIITPAKGHGGLYLSGYQVPTNPDVLRHLNIKRIIDASTLDDIREQWAYSGIRYMTIDIEDDPDDNVAQYFPAAIAFISEGLEAGEGVLVHCMAGASRSASIVMAFIMQREGWPIERGYDYVYGNRNQVYVNLGFRRQLADWE Sbjct: 1 TLKRRKLQGVILVSDSSPQHQTWRQAFARLLEDEKVAVVLLAEWEPFLHAYPFICHPEQIADAPYYPSEIITPAKGHGGLYLSGYQVPTNPDVLRHLNIKRIIDASTLDDIREQWAYSGIRYMTIDIEDDPDDNVAQYFPAAIAFISEGLEAGEGVLVHCMAGASRSASIVMAFIMQREGWPIERGYDYVYGNRNQVYVNLGFRRQLADWE 211
BLAST of jgi.p|Trimin1|136939 vs. uniprot
Match: K1RRP4_CRAGI (Dual specificity protein phosphatase 19 n=1 Tax=Crassostrea gigas TaxID=29159 RepID=K1RRP4_CRAGI) HSP 1 Score: 100 bits (249), Expect = 9.930e-23 Identity = 50/133 (37.59%), Postives = 80/133 (60.15%), Query Frame = 1 Query: 235 GLYLSGYQVPTNPDVLRHLNIKRIIDASTLDDIREQWAYSGIRYMTIDIEDDPDDNVAQYFPAAIAFISEGLEAGEGVLVHCMAGASRSASIVMAFIMQREGWPIERGYDYVYGNRNQVYVNLGFRRQLADWE 633 GL L V D+L+ + I++ +TL ++ ++ YM ID+ D P ++AQ+F A FI EG++ G VLVHC AG SRS++IV+A++M ++ WP+ + Y YV R+++ N GF+ QL +E Sbjct: 68 GLILGSQDVAAEFDLLKKYKVTHILNVATL--VKNSFS-ENFTYMNIDLLDIPQTDIAQHFETAFQFIDEGMDKGGCVLVHCNAGISRSSTIVIAYLMMKKHWPLNKAYQYVKEKRSKIRPNAGFQEQLQTFE 197
BLAST of jgi.p|Trimin1|136939 vs. uniprot
Match: A0A7S3Z7A2_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z7A2_9EUKA) HSP 1 Score: 99.4 bits (246), Expect = 4.000e-21 Identity = 68/216 (31.48%), Postives = 113/216 (52.31%), Query Frame = 1 Query: 1 TLKRRKLQG---VILVSDSSPQHQTWRQAFARLLEDEKVAVVLLAEWEPFLHAYPFICHPEQIADAPYYPSEIITPAKGHGGLYLSGYQVPTNPDVLRHLNIKRIIDASTLDDIREQWAYSGIRYMTIDIEDDPDDNVAQYFPAAIAFI--SEGLEAGEGVLVHCMAGASRSASIVMAFIMQREGWPIERGYDYVYGNRNQVYVNLGFRRQLADWE 633 TLK R +G VI+ +D + A++L D +L ++ FL YP+ + P++P+ ++ LYL N D L L I I++ S+ D++ + +Y I++ D+PD + +YF A AF+ +EG E+ + LVHC G SRS+++ +A++MQ+E W ++ YD+V NR ++ N GF RQLA +E Sbjct: 99 TLKSRARRGKRTVIVSTDGNTSPTESAGCMAKILADSSDLYILEGGFDSFLRKYPYATG---VVKLPWFPTVLL-----EDFLYLGSEDQAKNLDQLNALGITHILNVSS--DVKNYFP-EKFKYHKINLPDEPDAKLDEYFTDAFAFLRQAEG-ESSKKCLVHCYQGVSRSSTVTLAYMMQKEQWTLKDSYDFVKANRPEINPNPGFWRQLARFE 302
BLAST of jgi.p|Trimin1|136939 vs. uniprot
Match: A0A7J7CSG5_TRIWF (Dual specificity protein phosphatase 1 isoform 2 n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7CSG5_TRIWF) HSP 1 Score: 95.5 bits (236), Expect = 4.350e-21 Identity = 54/142 (38.03%), Postives = 76/142 (53.52%), Query Frame = 1 Query: 211 ITPAKGHGGLYLSGYQVPTNPDVLRHLNIKRIID-ASTLDDIREQWAYSGIRYMTIDIEDDPDDNVAQYFPAAIAFISEGLEAGEGVLVHCMAGASRSASIVMAFIMQREGWPIERGYDYVYGNRNQVYVNLGFRRQLADWE 633 + P K GL+L N L+ LN+ I+ AS+L Y I + D PD ++ QYF +FI E E G GVLVHC G SRSA+IV+A++M++ G + + D+V R QV N+GF +QL D+E Sbjct: 29 VIPCKIEEGLFLGSLGAANNKSELKRLNVTHILTVASSLPPAHPD----DFVYKVIPVMDRPDTDLRQYFDECFSFIDEAKEKGGGVLVHCFVGRSRSATIVIAYLMKKHGMSLSQAQDHVKSRRPQVCPNVGFMKQLQDFE 166
BLAST of jgi.p|Trimin1|136939 vs. uniprot
Match: A0A077ZYC4_STYLE (Leucine rich repeat and phosphatase domain containing protein n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A077ZYC4_STYLE) HSP 1 Score: 93.6 bits (231), Expect = 1.910e-20 Identity = 46/133 (34.59%), Postives = 79/133 (59.40%), Query Frame = 1 Query: 235 GLYLSGYQVPTNPDVLRHLNIKRIIDASTLDDIREQWAYSGIRYMTIDIEDDPDDNVAQYFPAAIAFISEGLEAGEGVLVHCMAGASRSASIVMAFIMQREGWPIERGYDYVYGNRNQVYVNLGFRRQLADWE 633 GLY+S N ++L+ I I+ T+ I ++ +YM ++I+D D ++ ++F A FI+ +E G VLVHC AG SRS ++V A++M + W ++ ++Y RN++Y NLGF++QL D++ Sbjct: 17 GLYMSDITTAENTEILKKYQITHIV---TVTKISPKFP-DRFQYMQVEIDDQSDQDIKKHFKATNKFINNAIENGGVVLVHCAAGISRSGAVVCAYLMYKNRWSFDQAWEYGQTKRNKMYPNLGFQKQLRDFQ 145
BLAST of jgi.p|Trimin1|136939 vs. uniprot
Match: A0A7D5B7V8_OSTFU (Dual-specificity protein phosphatase n=1 Tax=Ostrinia furnacalis TaxID=93504 RepID=A0A7D5B7V8_OSTFU) HSP 1 Score: 94.4 bits (233), Expect = 4.010e-20 Identity = 53/133 (39.85%), Postives = 75/133 (56.39%), Query Frame = 1 Query: 235 GLYLSGYQVPTNPDVLRHLNIKRIIDASTLDDIREQWAYSGIRYMTIDIEDDPDDNVAQYFPAAIAFISEGLEAGEGVLVHCMAGASRSASIVMAFIMQREGWPIERGYDYVYGNRNQVYVNLGFRRQLADWE 633 GLYLS + + VLRHLNI ++ + +A + I + I +D P N+ YFP A AFI EGL+ G VLVHC G SRSA+IV+A++M++ E+ Y YV R + N GF QL +++ Sbjct: 59 GLYLSNARAAADQSVLRHLNITHVLTVEAHRLPKSTFANTNISTLFIRADDTPSTNLMSYFPMANAFIDEGLQKGN-VLVHCHFGVSRSATIVIAYLMEKYSLTFEQAYFYVRQRRRFINPNPGFVSQLKEYQ 190
BLAST of jgi.p|Trimin1|136939 vs. uniprot
Match: A0A8J9YI34_9NEOP ((lesser marbled fritillary) hypothetical protein (Fragment) n=1 Tax=Brenthis ino TaxID=405034 RepID=A0A8J9YI34_9NEOP) HSP 1 Score: 93.2 bits (230), Expect = 8.960e-20 Identity = 54/132 (40.91%), Postives = 75/132 (56.82%), Query Frame = 1 Query: 235 GLYLSGYQVPTNPDVLRHLNIKRIIDASTLDDIREQWAYSGIRYMTIDIEDDPDDNVAQYFPAAIAFISEGLEAGEGVLVHCMAGASRSASIVMAFIMQREGWPIERGYDYVYGNRNQVYVNLGFRRQLADW 630 GLYLS + + +VLRHLNI ++ T + + S I + I D P N+ YFP A AFI EGL+ G VLVHC G SRSA++V+AFIM++ E+ Y++V R+ + N GF QL + Sbjct: 49 GLYLSNAKAACDRNVLRHLNITHVLTIETRRLPKSTFIDSNISTLYIRANDTPQTNLLPYFPMANAFIEEGLQKGN-VLVHCHFGVSRSATLVIAFIMEKYKLTFEQAYNFVRQRRSFINPNPGFVNQLKQY 179
BLAST of jgi.p|Trimin1|136939 vs. uniprot
Match: A0A6A6JY15_9PLEO (Phosphatases II (Fragment) n=1 Tax=Westerdykella ornata TaxID=318751 RepID=A0A6A6JY15_9PLEO) HSP 1 Score: 90.9 bits (224), Expect = 2.230e-19 Identity = 47/136 (34.56%), Postives = 76/136 (55.88%), Query Frame = 1 Query: 226 GHGGLYLSGYQVPTNPDVLRHLNIKRIIDASTLDDIREQWAYSGIRYMTIDIEDDPDDNVAQYFPAAIAFISEGLEAGEGVLVHCMAGASRSASIVMAFIMQREGWPIERGYDYVYGNRNQVYVNLGFRRQLADWE 633 G G LY+ G D++ I ++ A D + +Q +S +++ + ++DDP+ ++ QYF A +I EG+ +G GV VHC G SRSA+ V+A++M + G ERG D + R N+GF+ QL W+ Sbjct: 9 GAGKLYIGGLYGLYQTDLISAAGITHVLSAIDYDPLLQQH-FSHLKHFHVRVDDDPNQDLLQYFDAGSRYIDEGISSGGGVFVHCAMGKSRSATFVVAYLMWKCGVTWERGLDMLCKGRPVCDPNVGFKEQLGVWQ 143
BLAST of jgi.p|Trimin1|136939 vs. uniprot
Match: A0A821V9V2_9NEOP (Hypothetical protein n=3 Tax=Pieris TaxID=7115 RepID=A0A821V9V2_9NEOP) HSP 1 Score: 92.0 bits (227), Expect = 2.410e-19 Identity = 52/133 (39.10%), Postives = 74/133 (55.64%), Query Frame = 1 Query: 235 GLYLSGYQVPTNPDVLRHLNIKRIIDASTLDDIREQWAYSGIRYMTIDIEDDPDDNVAQYFPAAIAFISEGLEAGEGVLVHCMAGASRSASIVMAFIMQREGWPIERGYDYVYGNRNQVYVNLGFRRQLADWE 633 GLYLS + + DVLRHL I ++ + + S I + I D P N+ YFP A AFI EG++ G VLVHC G SRSA++V+A+IMQ+ G E+ +++V R + N GF QL ++ Sbjct: 48 GLYLSNARAAADRDVLRHLKITHVLTVEARRLPKSAFVDSDISTLYIRANDTPQTNLLPYFPMANAFIEEGIQKGN-VLVHCHFGVSRSATLVIAYIMQKYGLRYEQAFNFVRQRRRFINPNPGFVNQLKQYQ 179
BLAST of jgi.p|Trimin1|136939 vs. uniprot
Match: A0A8J1UHK6_OWEFU (Ofus.G141101 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1UHK6_OWEFU) HSP 1 Score: 91.7 bits (226), Expect = 2.460e-19 Identity = 49/133 (36.84%), Postives = 77/133 (57.89%), Query Frame = 1 Query: 235 GLYLSGYQVPTNPDVLRHLNIKRIIDASTLDDIREQWAYSGIRYMTIDIEDDPDDNVAQYFPAAIAFISEGLEAGEGVLVHCMAGASRSASIVMAFIMQREGWPIERGYDYVYGNRNQVYVNLGFRRQLADWE 633 GLYLS V + D+L +I I++ +++ E W +Y+ I+I D P+ +++++FP FI E L + VLVHC AG SRSA+IV+A+IM+ E ++ + V G R + N GF+ QL +E Sbjct: 68 GLYLSSQDVAADVDILEQHDITHILNVASMI---ENWFPDDFKYLKIEILDIPESDISKHFPECFKFIDEALGSKGRVLVHCNAGVSRSATIVIAYIMRTERMTLQEAHSKVAGVRPCIRPNAGFQHQLKTYE 197 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|136939 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_16848 ID=mRNA_16848|Name=jgi.p|Trimin1|136939|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=633bp|location=Sequence derived from alignment at Contig_193:77015..77647+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ACACTCAAACGGCGCAAACTACAAGGCGTAATCCTGGTCTCCGACAGCAGback to top protein sequence of jgi.p|Trimin1|136939 >Trimin1|136939|gw1.193.35.1 ID=Trimin1|136939|gw1.193.35.1|Name=jgi.p|Trimin1|136939|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=211bp TLKRRKLQGVILVSDSSPQHQTWRQAFARLLEDEKVAVVLLAEWEPFLHAback to top mRNA from alignment at Contig_193:77015..77647+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_16848 ID=mRNA_16848|Name=jgi.p|Trimin1|136939|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=633bp|location=Sequence derived from alignment at Contig_193:77015..77647+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_193:77015..77647+ >mRNA_16848 ID=mRNA_16848|Name=jgi.p|Trimin1|136939|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=633bp|location=Sequence derived from alignment at Contig_193:77015..77647+ (Tribonema minus UTEX_B_3156 )back to top |