mRNA_1681 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|157837
Unique NamemRNA_1681
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|157837 vs. uniprot
Match: A0A835Z319_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z319_9STRA)

HSP 1 Score: 946 bits (2445), Expect = 0.000e+0
Identity = 472/472 (100.00%), Postives = 472/472 (100.00%), Query Frame = 1
Query:    1 MGLDHRFALQSIINGNGFLEDGKRFLEDTSTLERCYSEKRIPWESKVRLRLSAVRADIELHISLAQHGGTEGAASAAAVLPHAAVDAITLVVHPWERISGVVQRASRAFFPAGVPQAELHTLTKGSADVGRTTSLDSAVYDFSSKLHHGAQLSFERYVSHDSGAVYVKTLTGKTVALAAVVADTTVDKLKQMFQDAQSIPPDQQRLRWRGKMLEDSRTVSDYGMKFCPQLREPTLQLELRLRGGGCVTGGRFADVADLNAISHMAFSHNAPAWRVACPGLNVEGVCGTTGCRARGKMVIRGVGMGAFTLGDACACPLCRRPFAPVTCAFHACAWMFEGVKAGGGAALGGVWREAGDAYERFNTGADGESGGSMVEWERLVLVAKYRGRKRIPAADAAAAGGVAGEPAAALASGSGAQVDDCAVCLEPLHSWHVSLQAAVTPCGHVYHEACLKAWRRSSSASNGTCPSCRANL 1416
            MGLDHRFALQSIINGNGFLEDGKRFLEDTSTLERCYSEKRIPWESKVRLRLSAVRADIELHISLAQHGGTEGAASAAAVLPHAAVDAITLVVHPWERISGVVQRASRAFFPAGVPQAELHTLTKGSADVGRTTSLDSAVYDFSSKLHHGAQLSFERYVSHDSGAVYVKTLTGKTVALAAVVADTTVDKLKQMFQDAQSIPPDQQRLRWRGKMLEDSRTVSDYGMKFCPQLREPTLQLELRLRGGGCVTGGRFADVADLNAISHMAFSHNAPAWRVACPGLNVEGVCGTTGCRARGKMVIRGVGMGAFTLGDACACPLCRRPFAPVTCAFHACAWMFEGVKAGGGAALGGVWREAGDAYERFNTGADGESGGSMVEWERLVLVAKYRGRKRIPAADAAAAGGVAGEPAAALASGSGAQVDDCAVCLEPLHSWHVSLQAAVTPCGHVYHEACLKAWRRSSSASNGTCPSCRANL
Sbjct:    1 MGLDHRFALQSIINGNGFLEDGKRFLEDTSTLERCYSEKRIPWESKVRLRLSAVRADIELHISLAQHGGTEGAASAAAVLPHAAVDAITLVVHPWERISGVVQRASRAFFPAGVPQAELHTLTKGSADVGRTTSLDSAVYDFSSKLHHGAQLSFERYVSHDSGAVYVKTLTGKTVALAAVVADTTVDKLKQMFQDAQSIPPDQQRLRWRGKMLEDSRTVSDYGMKFCPQLREPTLQLELRLRGGGCVTGGRFADVADLNAISHMAFSHNAPAWRVACPGLNVEGVCGTTGCRARGKMVIRGVGMGAFTLGDACACPLCRRPFAPVTCAFHACAWMFEGVKAGGGAALGGVWREAGDAYERFNTGADGESGGSMVEWERLVLVAKYRGRKRIPAADAAAAGGVAGEPAAALASGSGAQVDDCAVCLEPLHSWHVSLQAAVTPCGHVYHEACLKAWRRSSSASNGTCPSCRANL 472          
BLAST of jgi.p|Trimin1|157837 vs. uniprot
Match: A0A835YTW7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTW7_9STRA)

HSP 1 Score: 751 bits (1938), Expect = 1.170e-270
Identity = 383/448 (85.49%), Postives = 398/448 (88.84%), Query Frame = 1
Query:   73 FLEDTSTLERCYSEKRIPWESKVRLRLSAVRADIELHISLAQHGGTEGAASAAAVLPHAAVDAITLVVHPWERISGVVQRASRAFFPAGVPQAELHTLTKGSADVGRTTSLDSAVYDFSSKLHHGAQLSFERYVSHDSGAVYVKTLTGKTVALAAVVADTTVDKLKQMFQDAQSIPPDQQRLRWRGKMLEDSRTVSDYGMKFCPQLREPTLQLELRLRGGGCVTGGRFADVADLNAISHMAFSHNAPAWRVACPGLNVEGVCGTTGCRARGKMVIRGVGMGAFTLGDACACPLCRRPFAPVTCAFHACAWMFEGVKAGGGAALGGVWREAGDAYERFNTGADGESGGSMVEWERLVLVAKYRGRKRIPAADAAAAGGVAGEPAAALASGSGAQVDDCAVCLEPLHSWHVSLQAAVTPCGHVYHEACLKAWRRSSSASNGTCPSCRANL 1416
            FLEDT+TLE CYS K IPWESKVRL  SA+RADIELHISLAQH GTEGAASAAAVLPHAAVD I LVVHPWERISGVVQRASRAFF AGV +AELHTLTKGSADVGRTTSL+S V+DFSSKLHHGAQLSF+RYVSHDSGAVYVKTLTGK +ALAAVVADTTVDKLKQM  D + IPPDQQRL WRGK LEDSRTVSDYGMKFCP+LREP++Q+ LRLRGGG VT GRFADVAD NAIS MAFSHNAPAWRVACPGLNVEGVCGTTGCRARG+MVI GVGMGAFTLGDACACPLCRRPFAPVTCAF ACAWMFEGVKAGGG ALGGVWR AGDAYERFNTGADGESGGSMVEWERLVLVAK RGR R               PAAALASGS AQVDDCAVCLEPL SW+VSLQAAVTPCGHVYHEACLKAWRRSSS S GTC SC A+L
Sbjct:    2 FLEDTNTLEHCYSRKLIPWESKVRL--SALRADIELHISLAQHRGTEGAASAAAVLPHAAVDVINLVVHPWERISGVVQRASRAFFRAGVLRAELHTLTKGSADVGRTTSLESTVHDFSSKLHHGAQLSFQRYVSHDSGAVYVKTLTGKVIALAAVVADTTVDKLKQMIHDTEGIPPDQQRLIWRGKALEDSRTVSDYGMKFCPELREPSVQILLRLRGGGSVTSGRFADVADANAISRMAFSHNAPAWRVACPGLNVEGVCGTTGCRARGEMVIHGVGMGAFTLGDACACPLCRRPFAPVTCAFLACAWMFEGVKAGGGVALGGVWRAAGDAYERFNTGADGESGGSMVEWERLVLVAKCRGRVR---------------PAAALASGSSAQVDDCAVCLEPLCSWNVSLQAAVTPCGHVYHEACLKAWRRSSSTSRGTCASCCADL 432          
BLAST of jgi.p|Trimin1|157837 vs. uniprot
Match: A0A835ZBV8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBV8_9STRA)

HSP 1 Score: 444 bits (1143), Expect = 7.370e-153
Identity = 224/283 (79.15%), Postives = 237/283 (83.75%), Query Frame = 1
Query:  574 MFQDAQSIPPDQQRLRWRGKMLEDSRTVSDYGMKFCPQLREPTLQLELRLRGGGCVTGGRFADVADLNAISHMAFSHNAPAWRVACPGLNVEGVCGTTGCRARGKMVIRGVGMGAFTLGDACACPLCRRPFAPVTCAFHACAWMFEGVKAGGGAALGGVWREAGDAYERFNTGADGESGGSMVEWERLVLVAKYRGRKRIPAADAAAAGGVAGEPAAALASGSGAQVDDCAVCLEPLHS--WHVSLQAAVTPCGHVYHEACLKAWRRSSSASNGTCPSCRANL 1416
            M QDA+ IP DQQRL W G  LE  RTVSDY MKFCP+L EPTLQL L LRGGGCVTGGRFADVAD ++IS MAF  +AP WRVACPGLN EGVC TT CRARG+MVI  VGMGAFTLGDACACPLCRRPF PVTCAFH C WMFEGVKAGGGAALG VWREAGDAYERFNTGA+GESGGSMVEWERLVLVAKYRG  R+P A  AAA  VAGEPAA  A GSGAQVDDCAVCLEPLHS  W    + A TPCGHVYHEACLKAWRRSSSA++ TCP+CRA+L
Sbjct:    1 MIQDAEGIPLDQQRLCWHGTALEGCRTVSDYNMKFCPELCEPTLQLVLMLRGGGCVTGGRFADVADASSISRMAFDDDAPKWRVACPGLNAEGVCSTTWCRARGEMVIHEVGMGAFTLGDACACPLCRRPFTPVTCAFHDCVWMFEGVKAGGGAALGSVWREAGDAYERFNTGAEGESGGSMVEWERLVLVAKYRGHVRVPDAGTAAARSVAGEPAAP-AGGSGAQVDDCAVCLEPLHSRIW----EPAETPCGHVYHEACLKAWRRSSSAASATCPTCRADL 278          
BLAST of jgi.p|Trimin1|157837 vs. uniprot
Match: A0A836CBY2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBY2_9STRA)

HSP 1 Score: 323 bits (828), Expect = 6.870e-105
Identity = 172/299 (57.53%), Postives = 200/299 (66.89%), Query Frame = 1
Query:  523 VALAAVVADTTVDKLKQMFQDAQSIPPDQQRLRWRGKMLEDSRTVSDYGMKFCPQLRE-PTLQLELRLRGGGCVTGGRFADVADLNAISHMAFSHNAPAWRVACPGLNVEGVCGTTGCRARGKMVIRGVGMGAFTLGDACACPLCRRPFAPVTCAFHACAWMFEGVKAGGGAALGGVWREAGDAYERFNTGADGESGGSMVEWERLVLVAKYRGRKRIPAADAAAAGGVAGEPAAALASGSGAQVDDCAVCLEPLHSWHVSLQAAVTPCGHVYHEACLKAWRRSSSASNGTCPSCRANL 1416
            V L AV A T V +LKQ+  D + IPP+QQRL W GK LED R++S+Y +   P + + P L L LR+RGGG      FADVAD N IS +AFS   P WR+AC GLN+EG+C    C A GKMVI  +GMGAFTLG ACACPLC  P  P+TCAFH C WMFEGVKA   AAL   WREAGD YERFNTG +G   G+MVEWERLVL+AK R      AA  A     +GE    L S SG Q+DDCAVCLEPL +   S     TPCGH+YH+ACL AW+R SSA +G CP CRA+L
Sbjct:    2 VLLGAVTARTLVCELKQIITDLEGIPPEQQRLIWCGKQLEDRRSLSEYHID--PDINDLPALHLVLRMRGGGPT----FADVADANGISRIAFSDTGPKWRIACEGLNIEGLCTNAECAAHGKMVIHKIGMGAFTLGGACACPLCDAPIVPLTCAFHRCVWMFEGVKADSCAALSTAWREAGDTYERFNTGTEGSGSGAMVEWERLVLIAKGRDSIHAAAAYTAVVCSKSGE----LTSSSGTQLDDCAVCLEPLRTLFASF--VKTPCGHLYHKACLTAWQRCSSAGSGRCPMCRADL 288          
BLAST of jgi.p|Trimin1|157837 vs. uniprot
Match: A0A835YSA3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSA3_9STRA)

HSP 1 Score: 319 bits (818), Expect = 1.630e-103
Identity = 164/293 (55.97%), Postives = 197/293 (67.24%), Query Frame = 1
Query:  541 VADTTVDKLKQMFQDAQSIPPDQQRLRWRGKMLEDSRTVSDYGMKFCPQ-LREPTLQLELRLRGGGCVTGGRFADVADLNAISHMAFSHNAPAWRVACPGLNVEGVCGTTGCRARGKMVIRGVGMGAFTLGDACACPLCRRPFAPVTCAFHACAWMFEGVKAGGGAALGGVWREAGDAYERFNTGADGESGGSMVEWERLVLVAKYRGRKRIPAADAAAAGGVAGEPAAALASGSGAQVDDCAVCLEPLHSWHVSLQAAVTPCGHVYHEACLKAWRRSSSASNGTCPSCRANL 1416
            +A T V ++KQ  Q  +  PP+QQRL W GK L+DSR++  + M   P  +  PTLQL  RLRGGG ++GG FADVAD N IS +AFS  AP WR+AC GLN+EG+C    C A G+MVI  +GMGAF LG ACACPLC  P  P+TCAFH C WMFEGVKA GGA+L   WREAGD+YERFNTG +G S G+MVEWER +L+AK R      AAD   A            S +G Q+DDCAVCLEPL +         TPCGH+YH+ACL AW+R SSA +G CP CRA+L
Sbjct:    1 MARTLVHEVKQTIQRTEGFPPEQQRLIWSGKELKDSRSLRQHFMFPGPDNIHPPTLQLIPRLRGGGSLSGGMFADVADANGISRIAFSETAPEWRIACEGLNIEGLCSNAECAAHGQMVIHKIGMGAFALGGACACPLCVAPIVPLTCAFHRCVWMFEGVKADGGASLSTAWREAGDSYERFNTGTEGTSSGAMVEWERFMLIAKGRKFTCARAADTEDA------------SSNGTQLDDCAVCLEPLRTRRAPF--VKTPCGHLYHKACLTAWQRCSSAGSGRCPMCRADL 279          
BLAST of jgi.p|Trimin1|157837 vs. uniprot
Match: A0A835ZBQ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBQ4_9STRA)

HSP 1 Score: 235 bits (599), Expect = 3.270e-69
Identity = 139/314 (44.27%), Postives = 179/314 (57.01%), Query Frame = 1
Query:  493 VYVKTLTGKTVALAAVVADTTVDKLKQMFQDAQSIPPDQQRLRWRGKMLEDSRTVSDYGMKFCPQLREPTLQLELRLRGGGCVTGG-RFADVADLNAISHMAFSHNAPAWRVACPGLNVEGVCGTTGCRARGKMVIRGVGMGAFTLGDACACPLCRRPFAPVTCAFHACAWMFEGVKAGGGAALGGVWREAGD-AYERFNTGADGESGGSMVEWERLVLVAK----YRGRKRIPAADAAAAGGVAGEPAAALASGSGAQVDDCAVCLEPLHSWHVSLQAAVTPCGHVYHEACLKAWRRSSSASNGTCPSCRANL 1416
            ++VKTLTG    L  V++  T+D LK+M QD + I PDQQR+ + G+ LED R+V+DY ++     +E TL L LRLRGGGC   G +FADV +  A+   + S +AP WR    G+N+EG C    C AR  +VI  VGM AF LG  C CP+C     PVTC F+ACAW ++G K GG   + G WR AGD  Y+RF          +M  W RLVLVAK     + + R  AA+++ A   AG            Q D+CAVCL    S   S +A  TPCG+ YH  CL +WR  S AS   CP+CRA L
Sbjct:  109 LFVKTLTGACFELDDVLSGDTIDALKEMIQDLEGILPDQQRIIFAGRQLEDGRSVADYSIQ-----KEHTLHLVLRLRGGGCGPSGLQFADVTNDGAMERRSVSDDAPVWRTVRRGINMEGYCRNLRCEARVTLVIAPVGMAAFPLGSLCPCPVCYSAITPVTCGFYACAWTYDGAKEGG-ELVRGAWRTAGDDKYDRFR------ESDNMTTWSRLVLVAKPAVKVKPKPRATAAESSGADKAAGR----------LQPDECAVCLRGFGSGDGSSKATSTPCGYRYHALCLASWRECSHASCSKCPTCRAVL 400          
BLAST of jgi.p|Trimin1|157837 vs. uniprot
Match: A0A836C8N2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8N2_9STRA)

HSP 1 Score: 184 bits (466), Expect = 1.370e-50
Identity = 117/313 (37.38%), Postives = 162/313 (51.76%), Query Frame = 1
Query:  493 VYVKTLTGKTVALAAVVADTTVDKLKQMFQDAQSIPPDQQRLRWRGKMLEDSRTVSDYGMKFCPQLREPTLQLELRLRGGGCVTGGR--FADVADLNAISHMAFSHNAPAWRVACPGLNVEGVCGTTGCRARGKMVIRGVGMGAFTLGDACACPLCRRPFAPVTCAFHACAWMFEGVKAGGGAALGGVWREAGD-AYERFNTGADGESGGSMVEWERLVLVAKYRGRKRIPAADAAAAGGVAGEPAAALASGSG--AQVDDCAVCLEPLHSWHVSLQAAVTPCGHVYHEACLKAWRRSSSASNGTCPSCRANL 1416
            ++VKTL+G T+ +  +    TV  L++  +  + +P DQQ+L + GK L+ S T+ D+G+         T+ + L L GG  +   +  FADV+  +A+  ++F  +AP WR AC GLN+EG C    C+AR K+VI  +GM AFTLG  CACP C     PVTC F+AC WM+EG K  G   +   W  A D  Y R N        G+M  W RLVLVAK                     P A+ A      A   +CAVCL PL +   ++  A   CGH Y+  CL+ W+ SS  +  TC +CR  L
Sbjct:   37 IFVKTLSGSTITVHGLSHSDTVASLEEAIEGKEGVPVDQQKLSFAGKRLQPSHTLGDFGIGS-----GSTVHMVLSLCGGRSMPLLKIPFADVSRSDAMQRLSFDPDAPDWRTACEGLNMEGYCRNRACKARNKLVISMIGMNAFTLGSQCACPECGADVTPVTCGFYACTWMYEGAKTDG-MLMRSPWHTASDDLYHRVN------EHGNMASWSRLVLVAK---------------------PIASDAQDKDKDALPSECAVCLMPLAAAEHTVTRA---CGHRYYATCLQRWQESSIGA--TCTACRTEL 311          
BLAST of jgi.p|Trimin1|157837 vs. uniprot
Match: A0A225VQY5_9STRA (Ubiquitin family protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VQY5_9STRA)

HSP 1 Score: 179 bits (455), Expect = 2.270e-48
Identity = 115/319 (36.05%), Postives = 168/319 (52.66%), Query Frame = 1
Query:  493 VYVKTLTGKTVALAAVVADTTVDKLKQMFQDAQSIPPDQQRLRWRGKMLEDSRTVSDYGMKFCPQLREPTLQLELRLRGGGC-VTGGRFADVADLNAISHMAFSHNAPAWRVACPGLNVEGVCGTTGCRARGKMVIRGVGMGAFTL--GDACACPLCRRPFAPVTCAFHACAWMFEGVKAGGGAALGGVWREA-GDAYERFNTGADGESGGSMVEWERLVLVAKYRGRKRIPAADAAAAGGVAGEPAAALASGSGAQVDD-----CAVCLEPLHSWHVSLQAAVTPCGHVYHEACLKAWRRSSSASNG--TCPSCRANL 1416
            +Y+KTLTGKT+ +     D+ +D +KQ  QD    PPDQQRL + GK LED RT+ DYG+         ++   LRLRGGG  +T   FADV+D + +    FS NAP WR    GLN+EG C   GC A GKM+I       F L  GD   CP+C     P+TC F+ C W F+G+++  G ++   W++A G+ Y RF+  AD + G   VEW+ L+++ K RG         AA+  +   PA    + S +  +      C +C     +  V+ +   T C H +H +C++ W +  S  +   +CP CR  +
Sbjct:   75 IYIKTLTGKTLKIHCTSTDS-IDNVKQKIQDQDGTPPDQQRLIFAGKHLEDGRTLGDYGI-----FHGSSVCQVLRLRGGGGPLTSMYFADVSDNSILREHTFSTNAPQWRSCGKGLNIEGRCENRGCPAFGKMIIYPNRFNPFNLMRGDRAHCPMCGDDVKPLTCGFYDCVWKFDGIRSSDGFSISSPWKDASGEKYHRFD--ADEKHG--SVEWDSLLIMVKPRGE--------AASAKIIASPAIHQVNASTSDSEQESETICPICWSIAET--VAGETITTHCEHTFHTSCIQEWAQWCSRHDSLPSCPVCRRGI 373          
BLAST of jgi.p|Trimin1|157837 vs. uniprot
Match: A0A6H5KZP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZP2_9PHAE)

HSP 1 Score: 184 bits (467), Expect = 3.050e-48
Identity = 127/330 (38.48%), Postives = 167/330 (50.61%), Query Frame = 1
Query:  493 VYVKTLTGKTVALAAVVADTTVDKLKQMFQDAQSIPPDQQRLRWRGKMLEDSRTVSDYGMKFCPQLREPTLQLELRLRGGG-----CVTGGRFADVADLNAISHMAFSHNAPAWRVACPGLNVEGVCGTTGCRARGKMVIRGVGMGAFTL----GDACACPLCRRPFAPVTCAFHACAWMFEGVKAGGGAALGGVWREAGDAYERFNTGADGESGGSMVEWERLVLVAK--YRGRKRIPAADAAAAGGVAGEPAAALASGSGAQVDDCAVCLEPLHSWH--------------VSLQAAVTPCGHVYHEACLKAWRRSSSASNGTCPSCR 1407
            ++VKTLTGKTV L     +T  D +KQM QD + IPPDQQRL + G  LED  T+S Y ++        TL L LRLRGGG        G +F DV+D + ++  AFS +AP WRVA PGL +EG C  + C A G+MVI   G+  F L     D   CP+C     P TCAF  C W ++G KAG    L G+W+EAGD+Y RF+       G   VEW+RL++ A+   +  +R+P+A  A          A  A+ + A V D        H+W                +    V  CGH +H  CL  W + S      CP CR
Sbjct:  272 IFVKTLTGKTVKLVVGSYNTIAD-IKQMMQDMEGIPPDQQRLIFAGVQLEDGLTISFYNIQG-----NSTLHLVLRLRGGGFAAPPIAVGAKFVDVSDSSGLTEHAFSDHAPRWRVAEPGLCLEGRCTNSDCDAHGRMVILNHGLRDFDLIRPGRDPKRCPMCNFEVVPSTCAFTDCTWRYKGRKAGETNVLVGMWKEAGDSYHRFD-------GRGEVEWDRLLIQARPLLKLEQRVPSAPPADERVERPNTTAISATSTVADVID--------HTWGRCXXXXXXSAFGATSASDETVLDCGHRFHTRCLTGWEQGSMI---VCPICR 577          
BLAST of jgi.p|Trimin1|157837 vs. uniprot
Match: A0A6A3IE52_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3IE52_9STRA)

HSP 1 Score: 173 bits (439), Expect = 6.920e-46
Identity = 128/331 (38.67%), Postives = 170/331 (51.36%), Query Frame = 1
Query:  436 LHHGAQ--LSFERYVSHDSGAVYVKTLTGKTVALAAVVADTTVDKLKQMFQDAQSIPPDQQRLRWRGKMLEDSRTVSDYGMKFCPQLREPTLQLELRLRGGGCVTGGRFADVADLNAISHMAFSHNAPAWRVACPGLNVEGVCGTTGCRARGKMVIRGVGMGAFTL---GDACACPLCRRPFAPVTCAFHACAWMFEGVKAGGGAALGGVWR-EAGDAYERFNTGADGESGGSMVEWERLVLVAKYRGRKRIPAADAAAAGGVAGEPAAALASGSGAQVDDCAVCLEPLHSWHVSLQAAVTPCGHVYHEACLKAWRRSSSASNGT--CPSC 1404
            L HG    L+    V   S  +Y+KTLTGKT  +    A+T ++++K   Q+ + IPPDQQR+ + GK LED R +SDY +++       TL L LRLRGG  V    FADV+D +      FS  AP WR+   GLN+EG C    C A  ++VI   G   F L   GD   CP CR    PVTC F+ CAW FEGVKA GG      W+  +G+ Y+RF+  AD  SG   +EWE L+++ K       P  +A AA  V     A L S        CAVC   +    +S   A + CGH++H  C++ W + S        CP C
Sbjct:   83 LLHGCPRLLASTSLVGSSSAMIYIKTLTGKTTHVNCHAANT-IEEIKYDIQEQEGIPPDQQRIIFAGKQLEDGRKLSDYNIQY-----GSTLHLVLRLRGG-YVEPRCFADVSDGSISVEHEFSRTAPEWRICRKGLNIEGRCMNRTCIAYHELVIHPAGFEMFNLRKDGDV-TCPKCRSKVKPVTCGFYDCAWKFEGVKARGGFFTSSPWQIVSGEKYQRFD--ADETSG--SIEWESLLILVK-------PLKEAVAAELVESAQEARLHSDL-----VCAVCWTEI----LSGSGAGSECGHLFHCGCIENWSKWSEGQKTLTKCPVC 385          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|157837 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z319_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YTW7_9STRA1.170e-27085.49Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZBV8_9STRA7.370e-15379.15Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CBY2_9STRA6.870e-10557.53Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YSA3_9STRA1.630e-10355.97Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZBQ4_9STRA3.270e-6944.27Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836C8N2_9STRA1.370e-5037.38Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A225VQY5_9STRA2.270e-4836.05Ubiquitin family protein n=1 Tax=Phytophthora mega... [more]
A0A6H5KZP2_9PHAE3.050e-4838.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6A3IE52_9STRA6.920e-4638.67Uncharacterized protein n=5 Tax=Phytophthora TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_4contigContig_4:1320090..1321508 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|157837|e_gw1.4.131.1
BRITEbr01610,ko00000,ko00001,ko00002,ko01000,ko03011,ko03029,ko04121,ko04131,ko04147
KEGG ModuleM00177,M00179
KEGG Pathwayko03010,ko03320,ko04139,ko04214,ko04217,ko04621,ko04668,map03010,map03320,map04139,map04214,map04217,map04621,map04668
KEGG koko:K02927,ko:K02977,ko:K08770,ko:K17065
EC3.6.5.5
DescriptionUbiquitin homologues
COG categoryJ
Max annot lvl2759|Eukaryota
EggNOG OGsCOG1552@1|root,KOG0003@2759|Eukaryota,3QJ68@4776|Peronosporales
Evalue1.27e-45
Seed ortholog67593.Physo140234
Hectar predicted targeting categoryother localisation
TranscriptId158159
TrackFilteredModels1
ProteinId157837
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|157837gene_1681Tribonema minus UTEX_B_3156 geneContig_4 1320090..1321508 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_1681_1exon_1681_1Tribonema minus UTEX_B_3156 exonContig_4 1320090..1321508 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_1681CDS_1681Tribonema minus UTEX_B_3156 CDSContig_4 1320090..1321508 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|157837Trimin1|157837|e_gw1.4.131.1Tribonema minus UTEX_B_3156 polypeptideContig_4 1320090..1321508 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_1681 ID=mRNA_1681|Name=jgi.p|Trimin1|157837|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1419bp|location=Sequence derived from alignment at Contig_4:1320090..1321508+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGGGCTCGACCACAGGTTTGCCCTGCAGTCCATCATCAACGGCAACGG
GTTCCTTGAGGACGGCAAACGGTTCCTTGAGGACACGAGCACACTGGAGC
GCTGCTACAGCGAAAAGCGGATCCCCTGGGAGAGCAAGGTGCGCCTGCGC
CTGTCGGCGGTGCGCGCAGACATCGAGCTGCACATCAGCCTTGCGCAGCA
CGGAGGCACAGAGGGAGCGGCCAGTGCTGCTGCTGTGCTGCCCCACGCTG
CCGTGGACGCTATCACACTGGTAGTGCATCCGTGGGAGCGCATCAGCGGC
GTCGTGCAGCGCGCATCACGCGCCTTCTTCCCTGCCGGCGTGCCTCAAGC
CGAACTTCACACGCTCACCAAGGGCAGCGCAGACGTTGGCAGGACCACCA
GCCTAGACAGCGCTGTTTACGATTTCAGCAGCAAGCTGCACCATGGAGCC
CAGCTCTCGTTTGAACGCTATGTCAGCCATGACAGCGGCGCTGTGTACGT
GAAGACGCTGACGGGAAAGACTGTAGCGCTGGCAGCGGTGGTGGCGGACA
CTACCGTAGACAAACTCAAGCAAATGTTTCAGGACGCGCAGAGCATCCCT
CCCGACCAGCAGCGCCTACGCTGGCGCGGCAAGATGCTCGAGGACAGCCG
CACCGTCAGCGACTATGGCATGAAGTTTTGCCCCCAGCTGCGTGAGCCCA
CGCTCCAGCTCGAACTGAGGCTGCGCGGCGGCGGCTGCGTCACTGGCGGC
CGATTTGCCGATGTAGCCGACTTGAACGCCATCTCGCACATGGCATTCTC
CCACAACGCCCCCGCGTGGCGCGTGGCGTGCCCGGGGCTCAACGTCGAGG
GCGTGTGCGGCACCACTGGGTGCAGGGCGCGCGGCAAGATGGTCATCCGC
GGTGTCGGCATGGGCGCATTCACGCTCGGCGACGCGTGCGCGTGCCCGCT
GTGCCGCAGGCCGTTCGCGCCCGTCACGTGCGCCTTCCATGCCTGCGCGT
GGATGTTCGAGGGCGTCAAGGCGGGCGGCGGGGCAGCGCTCGGCGGCGTG
TGGCGCGAGGCGGGCGACGCCTACGAGCGCTTCAACACGGGCGCGGACGG
CGAAAGCGGCGGCAGCATGGTGGAGTGGGAGCGGCTGGTGCTCGTGGCCA
AGTATCGTGGGCGCAAGCGCATCCCTGCCGCCGACGCGGCCGCTGCCGGC
GGCGTCGCAGGCGAGCCCGCTGCTGCGTTGGCCAGTGGCAGCGGTGCTCA
GGTGGACGACTGCGCCGTGTGCCTGGAGCCGCTGCACTCGTGGCACGTTA
GCCTTCAGGCAGCGGTGACGCCATGCGGGCACGTGTACCACGAGGCGTGC
CTGAAGGCGTGGCGGCGCAGCAGCAGCGCCAGCAACGGCACCTGCCCGTC
TTGCCGTGCCAACCTTTGA
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protein sequence of jgi.p|Trimin1|157837

>Trimin1|157837|e_gw1.4.131.1 ID=Trimin1|157837|e_gw1.4.131.1|Name=jgi.p|Trimin1|157837|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=473bp
MGLDHRFALQSIINGNGFLEDGKRFLEDTSTLERCYSEKRIPWESKVRLR
LSAVRADIELHISLAQHGGTEGAASAAAVLPHAAVDAITLVVHPWERISG
VVQRASRAFFPAGVPQAELHTLTKGSADVGRTTSLDSAVYDFSSKLHHGA
QLSFERYVSHDSGAVYVKTLTGKTVALAAVVADTTVDKLKQMFQDAQSIP
PDQQRLRWRGKMLEDSRTVSDYGMKFCPQLREPTLQLELRLRGGGCVTGG
RFADVADLNAISHMAFSHNAPAWRVACPGLNVEGVCGTTGCRARGKMVIR
GVGMGAFTLGDACACPLCRRPFAPVTCAFHACAWMFEGVKAGGGAALGGV
WREAGDAYERFNTGADGESGGSMVEWERLVLVAKYRGRKRIPAADAAAAG
GVAGEPAAALASGSGAQVDDCAVCLEPLHSWHVSLQAAVTPCGHVYHEAC
LKAWRRSSSASNGTCPSCRANL*
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mRNA from alignment at Contig_4:1320090..1321508+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_1681 ID=mRNA_1681|Name=jgi.p|Trimin1|157837|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1419bp|location=Sequence derived from alignment at Contig_4:1320090..1321508+ (Tribonema minus UTEX_B_3156 )
ATGGGGCTCGACCACAGGTTTGCCCTGCAGTCCATCATCAACGGCAACGG GTTCCTTGAGGACGGCAAACGGTTCCTTGAGGACACGAGCACACTGGAGC GCTGCTACAGCGAAAAGCGGATCCCCTGGGAGAGCAAGGTGCGCCTGCGC CTGTCGGCGGTGCGCGCAGACATCGAGCTGCACATCAGCCTTGCGCAGCA CGGAGGCACAGAGGGAGCGGCCAGTGCTGCTGCTGTGCTGCCCCACGCTG CCGTGGACGCTATCACACTGGTAGTGCATCCGTGGGAGCGCATCAGCGGC GTCGTGCAGCGCGCATCACGCGCCTTCTTCCCTGCCGGCGTGCCTCAAGC CGAACTTCACACGCTCACCAAGGGCAGCGCAGACGTTGGCAGGACCACCA GCCTAGACAGCGCTGTTTACGATTTCAGCAGCAAGCTGCACCATGGAGCC CAGCTCTCGTTTGAACGCTATGTCAGCCATGACAGCGGCGCTGTGTACGT GAAGACGCTGACGGGAAAGACTGTAGCGCTGGCAGCGGTGGTGGCGGACA CTACCGTAGACAAACTCAAGCAAATGTTTCAGGACGCGCAGAGCATCCCT CCCGACCAGCAGCGCCTACGCTGGCGCGGCAAGATGCTCGAGGACAGCCG CACCGTCAGCGACTATGGCATGAAGTTTTGCCCCCAGCTGCGTGAGCCCA CGCTCCAGCTCGAACTGAGGCTGCGCGGCGGCGGCTGCGTCACTGGCGGC CGATTTGCCGATGTAGCCGACTTGAACGCCATCTCGCACATGGCATTCTC CCACAACGCCCCCGCGTGGCGCGTGGCGTGCCCGGGGCTCAACGTCGAGG GCGTGTGCGGCACCACTGGGTGCAGGGCGCGCGGCAAGATGGTCATCCGC GGTGTCGGCATGGGCGCATTCACGCTCGGCGACGCGTGCGCGTGCCCGCT GTGCCGCAGGCCGTTCGCGCCCGTCACGTGCGCCTTCCATGCCTGCGCGT GGATGTTCGAGGGCGTCAAGGCGGGCGGCGGGGCAGCGCTCGGCGGCGTG TGGCGCGAGGCGGGCGACGCCTACGAGCGCTTCAACACGGGCGCGGACGG CGAAAGCGGCGGCAGCATGGTGGAGTGGGAGCGGCTGGTGCTCGTGGCCA AGTATCGTGGGCGCAAGCGCATCCCTGCCGCCGACGCGGCCGCTGCCGGC GGCGTCGCAGGCGAGCCCGCTGCTGCGTTGGCCAGTGGCAGCGGTGCTCA GGTGGACGACTGCGCCGTGTGCCTGGAGCCGCTGCACTCGTGGCACGTTA GCCTTCAGGCAGCGGTGACGCCATGCGGGCACGTGTACCACGAGGCGTGC CTGAAGGCGTGGCGGCGCAGCAGCAGCGCCAGCAACGGCACCTGCCCGTC TTGCCGTGCCAACCTTTGA
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Coding sequence (CDS) from alignment at Contig_4:1320090..1321508+

>mRNA_1681 ID=mRNA_1681|Name=jgi.p|Trimin1|157837|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1419bp|location=Sequence derived from alignment at Contig_4:1320090..1321508+ (Tribonema minus UTEX_B_3156 )
ATGGGGCTCGACCACAGGTTTGCCCTGCAGTCCATCATCAACGGCAACGG
GTTCCTTGAGGACGGCAAACGGTTCCTTGAGGACACGAGCACACTGGAGC
GCTGCTACAGCGAAAAGCGGATCCCCTGGGAGAGCAAGGTGCGCCTGCGC
CTGTCGGCGGTGCGCGCAGACATCGAGCTGCACATCAGCCTTGCGCAGCA
CGGAGGCACAGAGGGAGCGGCCAGTGCTGCTGCTGTGCTGCCCCACGCTG
CCGTGGACGCTATCACACTGGTAGTGCATCCGTGGGAGCGCATCAGCGGC
GTCGTGCAGCGCGCATCACGCGCCTTCTTCCCTGCCGGCGTGCCTCAAGC
CGAACTTCACACGCTCACCAAGGGCAGCGCAGACGTTGGCAGGACCACCA
GCCTAGACAGCGCTGTTTACGATTTCAGCAGCAAGCTGCACCATGGAGCC
CAGCTCTCGTTTGAACGCTATGTCAGCCATGACAGCGGCGCTGTGTACGT
GAAGACGCTGACGGGAAAGACTGTAGCGCTGGCAGCGGTGGTGGCGGACA
CTACCGTAGACAAACTCAAGCAAATGTTTCAGGACGCGCAGAGCATCCCT
CCCGACCAGCAGCGCCTACGCTGGCGCGGCAAGATGCTCGAGGACAGCCG
CACCGTCAGCGACTATGGCATGAAGTTTTGCCCCCAGCTGCGTGAGCCCA
CGCTCCAGCTCGAACTGAGGCTGCGCGGCGGCGGCTGCGTCACTGGCGGC
CGATTTGCCGATGTAGCCGACTTGAACGCCATCTCGCACATGGCATTCTC
CCACAACGCCCCCGCGTGGCGCGTGGCGTGCCCGGGGCTCAACGTCGAGG
GCGTGTGCGGCACCACTGGGTGCAGGGCGCGCGGCAAGATGGTCATCCGC
GGTGTCGGCATGGGCGCATTCACGCTCGGCGACGCGTGCGCGTGCCCGCT
GTGCCGCAGGCCGTTCGCGCCCGTCACGTGCGCCTTCCATGCCTGCGCGT
GGATGTTCGAGGGCGTCAAGGCGGGCGGCGGGGCAGCGCTCGGCGGCGTG
TGGCGCGAGGCGGGCGACGCCTACGAGCGCTTCAACACGGGCGCGGACGG
CGAAAGCGGCGGCAGCATGGTGGAGTGGGAGCGGCTGGTGCTCGTGGCCA
AGTATCGTGGGCGCAAGCGCATCCCTGCCGCCGACGCGGCCGCTGCCGGC
GGCGTCGCAGGCGAGCCCGCTGCTGCGTTGGCCAGTGGCAGCGGTGCTCA
GGTGGACGACTGCGCCGTGTGCCTGGAGCCGCTGCACTCGTGGCACGTTA
GCCTTCAGGCAGCGGTGACGCCATGCGGGCACGTGTACCACGAGGCGTGC
CTGAAGGCGTGGCGGCGCAGCAGCAGCGCCAGCAACGGCACCTGCCCGTC
TTGCCGTGCCAACCTTTGA
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