mRNA_1681 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|157837 vs. uniprot
Match: A0A835Z319_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z319_9STRA) HSP 1 Score: 946 bits (2445), Expect = 0.000e+0 Identity = 472/472 (100.00%), Postives = 472/472 (100.00%), Query Frame = 1 Query: 1 MGLDHRFALQSIINGNGFLEDGKRFLEDTSTLERCYSEKRIPWESKVRLRLSAVRADIELHISLAQHGGTEGAASAAAVLPHAAVDAITLVVHPWERISGVVQRASRAFFPAGVPQAELHTLTKGSADVGRTTSLDSAVYDFSSKLHHGAQLSFERYVSHDSGAVYVKTLTGKTVALAAVVADTTVDKLKQMFQDAQSIPPDQQRLRWRGKMLEDSRTVSDYGMKFCPQLREPTLQLELRLRGGGCVTGGRFADVADLNAISHMAFSHNAPAWRVACPGLNVEGVCGTTGCRARGKMVIRGVGMGAFTLGDACACPLCRRPFAPVTCAFHACAWMFEGVKAGGGAALGGVWREAGDAYERFNTGADGESGGSMVEWERLVLVAKYRGRKRIPAADAAAAGGVAGEPAAALASGSGAQVDDCAVCLEPLHSWHVSLQAAVTPCGHVYHEACLKAWRRSSSASNGTCPSCRANL 1416 MGLDHRFALQSIINGNGFLEDGKRFLEDTSTLERCYSEKRIPWESKVRLRLSAVRADIELHISLAQHGGTEGAASAAAVLPHAAVDAITLVVHPWERISGVVQRASRAFFPAGVPQAELHTLTKGSADVGRTTSLDSAVYDFSSKLHHGAQLSFERYVSHDSGAVYVKTLTGKTVALAAVVADTTVDKLKQMFQDAQSIPPDQQRLRWRGKMLEDSRTVSDYGMKFCPQLREPTLQLELRLRGGGCVTGGRFADVADLNAISHMAFSHNAPAWRVACPGLNVEGVCGTTGCRARGKMVIRGVGMGAFTLGDACACPLCRRPFAPVTCAFHACAWMFEGVKAGGGAALGGVWREAGDAYERFNTGADGESGGSMVEWERLVLVAKYRGRKRIPAADAAAAGGVAGEPAAALASGSGAQVDDCAVCLEPLHSWHVSLQAAVTPCGHVYHEACLKAWRRSSSASNGTCPSCRANL Sbjct: 1 MGLDHRFALQSIINGNGFLEDGKRFLEDTSTLERCYSEKRIPWESKVRLRLSAVRADIELHISLAQHGGTEGAASAAAVLPHAAVDAITLVVHPWERISGVVQRASRAFFPAGVPQAELHTLTKGSADVGRTTSLDSAVYDFSSKLHHGAQLSFERYVSHDSGAVYVKTLTGKTVALAAVVADTTVDKLKQMFQDAQSIPPDQQRLRWRGKMLEDSRTVSDYGMKFCPQLREPTLQLELRLRGGGCVTGGRFADVADLNAISHMAFSHNAPAWRVACPGLNVEGVCGTTGCRARGKMVIRGVGMGAFTLGDACACPLCRRPFAPVTCAFHACAWMFEGVKAGGGAALGGVWREAGDAYERFNTGADGESGGSMVEWERLVLVAKYRGRKRIPAADAAAAGGVAGEPAAALASGSGAQVDDCAVCLEPLHSWHVSLQAAVTPCGHVYHEACLKAWRRSSSASNGTCPSCRANL 472
BLAST of jgi.p|Trimin1|157837 vs. uniprot
Match: A0A835YTW7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTW7_9STRA) HSP 1 Score: 751 bits (1938), Expect = 1.170e-270 Identity = 383/448 (85.49%), Postives = 398/448 (88.84%), Query Frame = 1 Query: 73 FLEDTSTLERCYSEKRIPWESKVRLRLSAVRADIELHISLAQHGGTEGAASAAAVLPHAAVDAITLVVHPWERISGVVQRASRAFFPAGVPQAELHTLTKGSADVGRTTSLDSAVYDFSSKLHHGAQLSFERYVSHDSGAVYVKTLTGKTVALAAVVADTTVDKLKQMFQDAQSIPPDQQRLRWRGKMLEDSRTVSDYGMKFCPQLREPTLQLELRLRGGGCVTGGRFADVADLNAISHMAFSHNAPAWRVACPGLNVEGVCGTTGCRARGKMVIRGVGMGAFTLGDACACPLCRRPFAPVTCAFHACAWMFEGVKAGGGAALGGVWREAGDAYERFNTGADGESGGSMVEWERLVLVAKYRGRKRIPAADAAAAGGVAGEPAAALASGSGAQVDDCAVCLEPLHSWHVSLQAAVTPCGHVYHEACLKAWRRSSSASNGTCPSCRANL 1416 FLEDT+TLE CYS K IPWESKVRL SA+RADIELHISLAQH GTEGAASAAAVLPHAAVD I LVVHPWERISGVVQRASRAFF AGV +AELHTLTKGSADVGRTTSL+S V+DFSSKLHHGAQLSF+RYVSHDSGAVYVKTLTGK +ALAAVVADTTVDKLKQM D + IPPDQQRL WRGK LEDSRTVSDYGMKFCP+LREP++Q+ LRLRGGG VT GRFADVAD NAIS MAFSHNAPAWRVACPGLNVEGVCGTTGCRARG+MVI GVGMGAFTLGDACACPLCRRPFAPVTCAF ACAWMFEGVKAGGG ALGGVWR AGDAYERFNTGADGESGGSMVEWERLVLVAK RGR R PAAALASGS AQVDDCAVCLEPL SW+VSLQAAVTPCGHVYHEACLKAWRRSSS S GTC SC A+L Sbjct: 2 FLEDTNTLEHCYSRKLIPWESKVRL--SALRADIELHISLAQHRGTEGAASAAAVLPHAAVDVINLVVHPWERISGVVQRASRAFFRAGVLRAELHTLTKGSADVGRTTSLESTVHDFSSKLHHGAQLSFQRYVSHDSGAVYVKTLTGKVIALAAVVADTTVDKLKQMIHDTEGIPPDQQRLIWRGKALEDSRTVSDYGMKFCPELREPSVQILLRLRGGGSVTSGRFADVADANAISRMAFSHNAPAWRVACPGLNVEGVCGTTGCRARGEMVIHGVGMGAFTLGDACACPLCRRPFAPVTCAFLACAWMFEGVKAGGGVALGGVWRAAGDAYERFNTGADGESGGSMVEWERLVLVAKCRGRVR---------------PAAALASGSSAQVDDCAVCLEPLCSWNVSLQAAVTPCGHVYHEACLKAWRRSSSTSRGTCASCCADL 432
BLAST of jgi.p|Trimin1|157837 vs. uniprot
Match: A0A835ZBV8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBV8_9STRA) HSP 1 Score: 444 bits (1143), Expect = 7.370e-153 Identity = 224/283 (79.15%), Postives = 237/283 (83.75%), Query Frame = 1 Query: 574 MFQDAQSIPPDQQRLRWRGKMLEDSRTVSDYGMKFCPQLREPTLQLELRLRGGGCVTGGRFADVADLNAISHMAFSHNAPAWRVACPGLNVEGVCGTTGCRARGKMVIRGVGMGAFTLGDACACPLCRRPFAPVTCAFHACAWMFEGVKAGGGAALGGVWREAGDAYERFNTGADGESGGSMVEWERLVLVAKYRGRKRIPAADAAAAGGVAGEPAAALASGSGAQVDDCAVCLEPLHS--WHVSLQAAVTPCGHVYHEACLKAWRRSSSASNGTCPSCRANL 1416 M QDA+ IP DQQRL W G LE RTVSDY MKFCP+L EPTLQL L LRGGGCVTGGRFADVAD ++IS MAF +AP WRVACPGLN EGVC TT CRARG+MVI VGMGAFTLGDACACPLCRRPF PVTCAFH C WMFEGVKAGGGAALG VWREAGDAYERFNTGA+GESGGSMVEWERLVLVAKYRG R+P A AAA VAGEPAA A GSGAQVDDCAVCLEPLHS W + A TPCGHVYHEACLKAWRRSSSA++ TCP+CRA+L Sbjct: 1 MIQDAEGIPLDQQRLCWHGTALEGCRTVSDYNMKFCPELCEPTLQLVLMLRGGGCVTGGRFADVADASSISRMAFDDDAPKWRVACPGLNAEGVCSTTWCRARGEMVIHEVGMGAFTLGDACACPLCRRPFTPVTCAFHDCVWMFEGVKAGGGAALGSVWREAGDAYERFNTGAEGESGGSMVEWERLVLVAKYRGHVRVPDAGTAAARSVAGEPAAP-AGGSGAQVDDCAVCLEPLHSRIW----EPAETPCGHVYHEACLKAWRRSSSAASATCPTCRADL 278
BLAST of jgi.p|Trimin1|157837 vs. uniprot
Match: A0A836CBY2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBY2_9STRA) HSP 1 Score: 323 bits (828), Expect = 6.870e-105 Identity = 172/299 (57.53%), Postives = 200/299 (66.89%), Query Frame = 1 Query: 523 VALAAVVADTTVDKLKQMFQDAQSIPPDQQRLRWRGKMLEDSRTVSDYGMKFCPQLRE-PTLQLELRLRGGGCVTGGRFADVADLNAISHMAFSHNAPAWRVACPGLNVEGVCGTTGCRARGKMVIRGVGMGAFTLGDACACPLCRRPFAPVTCAFHACAWMFEGVKAGGGAALGGVWREAGDAYERFNTGADGESGGSMVEWERLVLVAKYRGRKRIPAADAAAAGGVAGEPAAALASGSGAQVDDCAVCLEPLHSWHVSLQAAVTPCGHVYHEACLKAWRRSSSASNGTCPSCRANL 1416 V L AV A T V +LKQ+ D + IPP+QQRL W GK LED R++S+Y + P + + P L L LR+RGGG FADVAD N IS +AFS P WR+AC GLN+EG+C C A GKMVI +GMGAFTLG ACACPLC P P+TCAFH C WMFEGVKA AAL WREAGD YERFNTG +G G+MVEWERLVL+AK R AA A +GE L S SG Q+DDCAVCLEPL + S TPCGH+YH+ACL AW+R SSA +G CP CRA+L Sbjct: 2 VLLGAVTARTLVCELKQIITDLEGIPPEQQRLIWCGKQLEDRRSLSEYHID--PDINDLPALHLVLRMRGGGPT----FADVADANGISRIAFSDTGPKWRIACEGLNIEGLCTNAECAAHGKMVIHKIGMGAFTLGGACACPLCDAPIVPLTCAFHRCVWMFEGVKADSCAALSTAWREAGDTYERFNTGTEGSGSGAMVEWERLVLIAKGRDSIHAAAAYTAVVCSKSGE----LTSSSGTQLDDCAVCLEPLRTLFASF--VKTPCGHLYHKACLTAWQRCSSAGSGRCPMCRADL 288
BLAST of jgi.p|Trimin1|157837 vs. uniprot
Match: A0A835YSA3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSA3_9STRA) HSP 1 Score: 319 bits (818), Expect = 1.630e-103 Identity = 164/293 (55.97%), Postives = 197/293 (67.24%), Query Frame = 1 Query: 541 VADTTVDKLKQMFQDAQSIPPDQQRLRWRGKMLEDSRTVSDYGMKFCPQ-LREPTLQLELRLRGGGCVTGGRFADVADLNAISHMAFSHNAPAWRVACPGLNVEGVCGTTGCRARGKMVIRGVGMGAFTLGDACACPLCRRPFAPVTCAFHACAWMFEGVKAGGGAALGGVWREAGDAYERFNTGADGESGGSMVEWERLVLVAKYRGRKRIPAADAAAAGGVAGEPAAALASGSGAQVDDCAVCLEPLHSWHVSLQAAVTPCGHVYHEACLKAWRRSSSASNGTCPSCRANL 1416 +A T V ++KQ Q + PP+QQRL W GK L+DSR++ + M P + PTLQL RLRGGG ++GG FADVAD N IS +AFS AP WR+AC GLN+EG+C C A G+MVI +GMGAF LG ACACPLC P P+TCAFH C WMFEGVKA GGA+L WREAGD+YERFNTG +G S G+MVEWER +L+AK R AAD A S +G Q+DDCAVCLEPL + TPCGH+YH+ACL AW+R SSA +G CP CRA+L Sbjct: 1 MARTLVHEVKQTIQRTEGFPPEQQRLIWSGKELKDSRSLRQHFMFPGPDNIHPPTLQLIPRLRGGGSLSGGMFADVADANGISRIAFSETAPEWRIACEGLNIEGLCSNAECAAHGQMVIHKIGMGAFALGGACACPLCVAPIVPLTCAFHRCVWMFEGVKADGGASLSTAWREAGDSYERFNTGTEGTSSGAMVEWERFMLIAKGRKFTCARAADTEDA------------SSNGTQLDDCAVCLEPLRTRRAPF--VKTPCGHLYHKACLTAWQRCSSAGSGRCPMCRADL 279
BLAST of jgi.p|Trimin1|157837 vs. uniprot
Match: A0A835ZBQ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBQ4_9STRA) HSP 1 Score: 235 bits (599), Expect = 3.270e-69 Identity = 139/314 (44.27%), Postives = 179/314 (57.01%), Query Frame = 1 Query: 493 VYVKTLTGKTVALAAVVADTTVDKLKQMFQDAQSIPPDQQRLRWRGKMLEDSRTVSDYGMKFCPQLREPTLQLELRLRGGGCVTGG-RFADVADLNAISHMAFSHNAPAWRVACPGLNVEGVCGTTGCRARGKMVIRGVGMGAFTLGDACACPLCRRPFAPVTCAFHACAWMFEGVKAGGGAALGGVWREAGD-AYERFNTGADGESGGSMVEWERLVLVAK----YRGRKRIPAADAAAAGGVAGEPAAALASGSGAQVDDCAVCLEPLHSWHVSLQAAVTPCGHVYHEACLKAWRRSSSASNGTCPSCRANL 1416 ++VKTLTG L V++ T+D LK+M QD + I PDQQR+ + G+ LED R+V+DY ++ +E TL L LRLRGGGC G +FADV + A+ + S +AP WR G+N+EG C C AR +VI VGM AF LG C CP+C PVTC F+ACAW ++G K GG + G WR AGD Y+RF +M W RLVLVAK + + R AA+++ A AG Q D+CAVCL S S +A TPCG+ YH CL +WR S AS CP+CRA L Sbjct: 109 LFVKTLTGACFELDDVLSGDTIDALKEMIQDLEGILPDQQRIIFAGRQLEDGRSVADYSIQ-----KEHTLHLVLRLRGGGCGPSGLQFADVTNDGAMERRSVSDDAPVWRTVRRGINMEGYCRNLRCEARVTLVIAPVGMAAFPLGSLCPCPVCYSAITPVTCGFYACAWTYDGAKEGG-ELVRGAWRTAGDDKYDRFR------ESDNMTTWSRLVLVAKPAVKVKPKPRATAAESSGADKAAGR----------LQPDECAVCLRGFGSGDGSSKATSTPCGYRYHALCLASWRECSHASCSKCPTCRAVL 400
BLAST of jgi.p|Trimin1|157837 vs. uniprot
Match: A0A836C8N2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8N2_9STRA) HSP 1 Score: 184 bits (466), Expect = 1.370e-50 Identity = 117/313 (37.38%), Postives = 162/313 (51.76%), Query Frame = 1 Query: 493 VYVKTLTGKTVALAAVVADTTVDKLKQMFQDAQSIPPDQQRLRWRGKMLEDSRTVSDYGMKFCPQLREPTLQLELRLRGGGCVTGGR--FADVADLNAISHMAFSHNAPAWRVACPGLNVEGVCGTTGCRARGKMVIRGVGMGAFTLGDACACPLCRRPFAPVTCAFHACAWMFEGVKAGGGAALGGVWREAGD-AYERFNTGADGESGGSMVEWERLVLVAKYRGRKRIPAADAAAAGGVAGEPAAALASGSG--AQVDDCAVCLEPLHSWHVSLQAAVTPCGHVYHEACLKAWRRSSSASNGTCPSCRANL 1416 ++VKTL+G T+ + + TV L++ + + +P DQQ+L + GK L+ S T+ D+G+ T+ + L L GG + + FADV+ +A+ ++F +AP WR AC GLN+EG C C+AR K+VI +GM AFTLG CACP C PVTC F+AC WM+EG K G + W A D Y R N G+M W RLVLVAK P A+ A A +CAVCL PL + ++ A CGH Y+ CL+ W+ SS + TC +CR L Sbjct: 37 IFVKTLSGSTITVHGLSHSDTVASLEEAIEGKEGVPVDQQKLSFAGKRLQPSHTLGDFGIGS-----GSTVHMVLSLCGGRSMPLLKIPFADVSRSDAMQRLSFDPDAPDWRTACEGLNMEGYCRNRACKARNKLVISMIGMNAFTLGSQCACPECGADVTPVTCGFYACTWMYEGAKTDG-MLMRSPWHTASDDLYHRVN------EHGNMASWSRLVLVAK---------------------PIASDAQDKDKDALPSECAVCLMPLAAAEHTVTRA---CGHRYYATCLQRWQESSIGA--TCTACRTEL 311
BLAST of jgi.p|Trimin1|157837 vs. uniprot
Match: A0A225VQY5_9STRA (Ubiquitin family protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VQY5_9STRA) HSP 1 Score: 179 bits (455), Expect = 2.270e-48 Identity = 115/319 (36.05%), Postives = 168/319 (52.66%), Query Frame = 1 Query: 493 VYVKTLTGKTVALAAVVADTTVDKLKQMFQDAQSIPPDQQRLRWRGKMLEDSRTVSDYGMKFCPQLREPTLQLELRLRGGGC-VTGGRFADVADLNAISHMAFSHNAPAWRVACPGLNVEGVCGTTGCRARGKMVIRGVGMGAFTL--GDACACPLCRRPFAPVTCAFHACAWMFEGVKAGGGAALGGVWREA-GDAYERFNTGADGESGGSMVEWERLVLVAKYRGRKRIPAADAAAAGGVAGEPAAALASGSGAQVDD-----CAVCLEPLHSWHVSLQAAVTPCGHVYHEACLKAWRRSSSASNG--TCPSCRANL 1416 +Y+KTLTGKT+ + D+ +D +KQ QD PPDQQRL + GK LED RT+ DYG+ ++ LRLRGGG +T FADV+D + + FS NAP WR GLN+EG C GC A GKM+I F L GD CP+C P+TC F+ C W F+G+++ G ++ W++A G+ Y RF+ AD + G VEW+ L+++ K RG AA+ + PA + S + + C +C + V+ + T C H +H +C++ W + S + +CP CR + Sbjct: 75 IYIKTLTGKTLKIHCTSTDS-IDNVKQKIQDQDGTPPDQQRLIFAGKHLEDGRTLGDYGI-----FHGSSVCQVLRLRGGGGPLTSMYFADVSDNSILREHTFSTNAPQWRSCGKGLNIEGRCENRGCPAFGKMIIYPNRFNPFNLMRGDRAHCPMCGDDVKPLTCGFYDCVWKFDGIRSSDGFSISSPWKDASGEKYHRFD--ADEKHG--SVEWDSLLIMVKPRGE--------AASAKIIASPAIHQVNASTSDSEQESETICPICWSIAET--VAGETITTHCEHTFHTSCIQEWAQWCSRHDSLPSCPVCRRGI 373
BLAST of jgi.p|Trimin1|157837 vs. uniprot
Match: A0A6H5KZP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZP2_9PHAE) HSP 1 Score: 184 bits (467), Expect = 3.050e-48 Identity = 127/330 (38.48%), Postives = 167/330 (50.61%), Query Frame = 1 Query: 493 VYVKTLTGKTVALAAVVADTTVDKLKQMFQDAQSIPPDQQRLRWRGKMLEDSRTVSDYGMKFCPQLREPTLQLELRLRGGG-----CVTGGRFADVADLNAISHMAFSHNAPAWRVACPGLNVEGVCGTTGCRARGKMVIRGVGMGAFTL----GDACACPLCRRPFAPVTCAFHACAWMFEGVKAGGGAALGGVWREAGDAYERFNTGADGESGGSMVEWERLVLVAK--YRGRKRIPAADAAAAGGVAGEPAAALASGSGAQVDDCAVCLEPLHSWH--------------VSLQAAVTPCGHVYHEACLKAWRRSSSASNGTCPSCR 1407 ++VKTLTGKTV L +T D +KQM QD + IPPDQQRL + G LED T+S Y ++ TL L LRLRGGG G +F DV+D + ++ AFS +AP WRVA PGL +EG C + C A G+MVI G+ F L D CP+C P TCAF C W ++G KAG L G+W+EAGD+Y RF+ G VEW+RL++ A+ + +R+P+A A A A+ + A V D H+W + V CGH +H CL W + S CP CR Sbjct: 272 IFVKTLTGKTVKLVVGSYNTIAD-IKQMMQDMEGIPPDQQRLIFAGVQLEDGLTISFYNIQG-----NSTLHLVLRLRGGGFAAPPIAVGAKFVDVSDSSGLTEHAFSDHAPRWRVAEPGLCLEGRCTNSDCDAHGRMVILNHGLRDFDLIRPGRDPKRCPMCNFEVVPSTCAFTDCTWRYKGRKAGETNVLVGMWKEAGDSYHRFD-------GRGEVEWDRLLIQARPLLKLEQRVPSAPPADERVERPNTTAISATSTVADVID--------HTWGRCXXXXXXSAFGATSASDETVLDCGHRFHTRCLTGWEQGSMI---VCPICR 577
BLAST of jgi.p|Trimin1|157837 vs. uniprot
Match: A0A6A3IE52_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3IE52_9STRA) HSP 1 Score: 173 bits (439), Expect = 6.920e-46 Identity = 128/331 (38.67%), Postives = 170/331 (51.36%), Query Frame = 1 Query: 436 LHHGAQ--LSFERYVSHDSGAVYVKTLTGKTVALAAVVADTTVDKLKQMFQDAQSIPPDQQRLRWRGKMLEDSRTVSDYGMKFCPQLREPTLQLELRLRGGGCVTGGRFADVADLNAISHMAFSHNAPAWRVACPGLNVEGVCGTTGCRARGKMVIRGVGMGAFTL---GDACACPLCRRPFAPVTCAFHACAWMFEGVKAGGGAALGGVWR-EAGDAYERFNTGADGESGGSMVEWERLVLVAKYRGRKRIPAADAAAAGGVAGEPAAALASGSGAQVDDCAVCLEPLHSWHVSLQAAVTPCGHVYHEACLKAWRRSSSASNGT--CPSC 1404 L HG L+ V S +Y+KTLTGKT + A+T ++++K Q+ + IPPDQQR+ + GK LED R +SDY +++ TL L LRLRGG V FADV+D + FS AP WR+ GLN+EG C C A ++VI G F L GD CP CR PVTC F+ CAW FEGVKA GG W+ +G+ Y+RF+ AD SG +EWE L+++ K P +A AA V A L S CAVC + +S A + CGH++H C++ W + S CP C Sbjct: 83 LLHGCPRLLASTSLVGSSSAMIYIKTLTGKTTHVNCHAANT-IEEIKYDIQEQEGIPPDQQRIIFAGKQLEDGRKLSDYNIQY-----GSTLHLVLRLRGG-YVEPRCFADVSDGSISVEHEFSRTAPEWRICRKGLNIEGRCMNRTCIAYHELVIHPAGFEMFNLRKDGDV-TCPKCRSKVKPVTCGFYDCAWKFEGVKARGGFFTSSPWQIVSGEKYQRFD--ADETSG--SIEWESLLILVK-------PLKEAVAAELVESAQEARLHSDL-----VCAVCWTEI----LSGSGAGSECGHLFHCGCIENWSKWSEGQKTLTKCPVC 385 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|157837 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_1681 ID=mRNA_1681|Name=jgi.p|Trimin1|157837|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1419bp|location=Sequence derived from alignment at Contig_4:1320090..1321508+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGGGCTCGACCACAGGTTTGCCCTGCAGTCCATCATCAACGGCAACGGback to top protein sequence of jgi.p|Trimin1|157837 >Trimin1|157837|e_gw1.4.131.1 ID=Trimin1|157837|e_gw1.4.131.1|Name=jgi.p|Trimin1|157837|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=473bp MGLDHRFALQSIINGNGFLEDGKRFLEDTSTLERCYSEKRIPWESKVRLRback to top mRNA from alignment at Contig_4:1320090..1321508+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_1681 ID=mRNA_1681|Name=jgi.p|Trimin1|157837|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1419bp|location=Sequence derived from alignment at Contig_4:1320090..1321508+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_4:1320090..1321508+ >mRNA_1681 ID=mRNA_1681|Name=jgi.p|Trimin1|157837|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1419bp|location=Sequence derived from alignment at Contig_4:1320090..1321508+ (Tribonema minus UTEX_B_3156 )back to top |