mRNA_16770 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|176353
Unique NamemRNA_16770
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|176353 vs. uniprot
Match: A0A835ZG89_9STRA (RTW, ras superfamily GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG89_9STRA)

HSP 1 Score: 396 bits (1018), Expect = 1.180e-139
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 1 
Query:    1 MAEVSRGSSADTDDLGDPDLKVILLGDSAVGKSKLVERYLMDEYSPRQLSTFALTLFRKNAVLEDGTRTTVDFWDTAGQERFTSMHPSYYYRAHACIMVFDVTRKATYKNLVQWYGELRQFCESIPCILVANKIDVDYNVTKKCFKFATQHNLPFFFVSAADGANVVQVFEEAIRLAIEHKRSGGDFVEDALTLLDS 591
            MAEVSRGSSADTDDLGDPDLKVILLGDSAVGKSKLVERYLMDEYSPRQLSTFALTLFRKNAVLEDGTRTTVDFWDTAGQERFTSMHPSYYYRAHACIMVFDVTRKATYKNLVQWYGELRQFCESIPCILVANKIDVDYNVTKKCFKFATQHNLPFFFVSAADGANVVQVFEEAIRLAIEHKRSGGDFVEDALTLLDS
Sbjct:    1 MAEVSRGSSADTDDLGDPDLKVILLGDSAVGKSKLVERYLMDEYSPRQLSTFALTLFRKNAVLEDGTRTTVDFWDTAGQERFTSMHPSYYYRAHACIMVFDVTRKATYKNLVQWYGELRQFCESIPCILVANKIDVDYNVTKKCFKFATQHNLPFFFVSAADGANVVQVFEEAIRLAIEHKRSGGDFVEDALTLLDS 197
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BLAST of jgi.p|Trimin1|176353 vs. uniprot
Match: D7G647_ECTSI (RTW, Ras superfamily GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G647_ECTSI)

HSP 1 Score: 310 bits (793), Expect = 2.770e-105
Identity = 148/184 (80.43%), Postives = 167/184 (90.76%), Query Frame = 1 
Query:   37 DDLGDPDLKVILLGDSAVGKSKLVERYLMDEYSPRQLSTFALTLFRKNAVLEDGTRTTVDFWDTAGQERFTSMHPSYYYRAHACIMVFDVTRKATYKNLVQWYGELRQFCESIPCILVANKIDVDYNVTKKCFKFATQHNLPFFFVSAADGANVVQVFEEAIRLAIEHKRSGGDFVEDALTLLD 588
            +DL DPDLKVILLGDSAVGKSKLVERYLMDEY+PRQLSTFALTLFRKNA L+DG    VDFWDTAGQERF+SMHPSYYYRAHACIMVFDVTRKATYKNL  WYGELRQ+ ESIPC+L+ANKIDVDY VTKK FKFA QH+LPFFFVSAADG NVV+ F+EA++  +E K++GGDFV++AL+LL+
Sbjct:   17 EDLEDPDLKVILLGDSAVGKSKLVERYLMDEYNPRQLSTFALTLFRKNAKLDDGVEVKVDFWDTAGQERFSSMHPSYYYRAHACIMVFDVTRKATYKNLSDWYGELRQYSESIPCLLIANKIDVDYQVTKKSFKFAQQHDLPFFFVSAADGTNVVKAFDEAVKAGMEFKKNGGDFVDEALSLLE 200
[Close]
BLAST of jgi.p|Trimin1|176353 vs. uniprot
Match: A0A125SEA6_9STRA (RABL2 n=1 Tax=Trachydiscus minutus TaxID=1032745 RepID=A0A125SEA6_9STRA)

HSP 1 Score: 283 bits (724), Expect = 1.170e-94
Identity = 134/182 (73.63%), Postives = 154/182 (84.62%), Query Frame = 1 
Query:   40 DLGDPDLKVILLGDSAVGKSKLVERYLMDEYSPRQLSTFALTLFRKNAVLEDGTRTTVDFWDTAGQERFTSMHPSYYYRAHACIMVFDVTRKATYKNLVQWYGELRQFCESIPCILVANKIDVDYNVTKKCFKFATQHNLPFFFVSAADGANVVQVFEEAIRLAIEHKRSGGDFVEDALTLL 585
            DLGDPD K+ILLGDSAVGKSKLVERYLMDEY+PRQLST+ALTL+RK  VLE+G    +D WDTAGQERF S+HPSYYY AH CI+VFDVTRK TY++L  WYGELRQ+CESIPCILVANKIDVDY VTKK FKFA+Q+ LPFFFVSAADG NVV+VF EA+RL I  K++  DF+ + +  L
Sbjct:   28 DLGDPDCKIILLGDSAVGKSKLVERYLMDEYNPRQLSTYALTLYRKTVVLEEGNTYDIDLWDTAGQERFNSLHPSYYYGAHCCILVFDVTRKVTYQHLSDWYGELRQYCESIPCILVANKIDVDYKVTKKSFKFASQYELPFFFVSAADGTNVVKVFHEAVRLGINFKKNNPDFMTEVIEFL 209
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BLAST of jgi.p|Trimin1|176353 vs. uniprot
Match: A0A6G0WRD6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WRD6_9STRA)

HSP 1 Score: 274 bits (701), Expect = 8.330e-91
Identity = 131/184 (71.20%), Postives = 151/184 (82.07%), Query Frame = 1 
Query:   37 DDLGDPDLKVILLGDSAVGKSKLVERYLMDEYSPRQLSTFALTLFRKNAVLEDGTRTTVDFWDTAGQERFTSMHPSYYYRAHACIMVFDVTRKATYKNLVQWYGELRQFCESIPCILVANKIDVDYNVTKKCFKFATQHNLPFFFVSAADGANVVQVFEEAIRLAIEHKRSGGDFVEDALTLLD 588
            D LGDPD+K+ILLGDSAVGKSKLVERY+M+EY PRQLSTFALTLFRK+  LEDGT   +DFWDTAGQERF SMH SYY+ A ACI+VFDVTRK TY++L  WY ELR++CESIPC L ANK+DVD  VT K FKFA  HNL F FVSAADG NVV++FE+ I  A++HK+ GGDF+ D L LLD
Sbjct:   12 DGLGDPDVKIILLGDSAVGKSKLVERYMMNEYQPRQLSTFALTLFRKDFQLEDGTTAKIDFWDTAGQERFNSMHASYYFGASACILVFDVTRKTTYQHLADWYKELREYCESIPCFLAANKVDVDLEVTNKKFKFAETHNLSFSFVSAADGTNVVKLFEDTIHAALKHKKEGGDFMSDVLDLLD 195
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BLAST of jgi.p|Trimin1|176353 vs. uniprot
Match: A0A7S2XUJ5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUJ5_9STRA)

HSP 1 Score: 271 bits (693), Expect = 6.990e-90
Identity = 132/198 (66.67%), Postives = 158/198 (79.80%), Query Frame = 1 
Query:   37 DDLGDPDLKVILLGDSAVGKSKLVERYLMDEYSPRQLSTFALTLFRKNAVL---------EDGTR------TTVDFWDTAGQERFTSMHPSYYYRAHACIMVFDVTRKATYKNLVQWYGELRQFCESIPCILVANKIDVDYNVTKKCFKFATQHNLPFFFVSAADGANVVQVFEEAIRLAIEHKRSGGDFVEDALTLL 585
            DDL DPD KVILLGDSAVGKSKLVERYLM++++PRQLSTFALTL+RK   L         +DG +       ++D WDTAGQERFTSMHPSYYYRAHACI+VFDVTRK TY+NL  WY ELR +CE+IP IL ANKID++Y VTKK FKFA+QH LPFFF SAADG NVVQ+FE A+++ + +K + GDF+EDAL++L
Sbjct:   10 DDLPDPDCKVILLGDSAVGKSKLVERYLMNDFNPRQLSTFALTLYRKEVQLPEDDGDGGKDDGAKGQGGRTVSIDIWDTAGQERFTSMHPSYYYRAHACILVFDVTRKVTYQNLSTWYSELRNYCENIPVILCANKIDINYEVTKKSFKFASQHQLPFFFASAADGTNVVQIFESAVKMGVHYKETEGDFIEDALSVL 207
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BLAST of jgi.p|Trimin1|176353 vs. uniprot
Match: H3GJM6_PHYRM (Uncharacterized protein n=14 Tax=Phytophthora TaxID=4783 RepID=H3GJM6_PHYRM)

HSP 1 Score: 270 bits (689), Expect = 1.830e-89
Identity = 136/186 (73.12%), Postives = 153/186 (82.26%), Query Frame = 1 
Query:   37 DDLGDPDLKVILLGDSAVGKSKLVERYLMDEYSPRQLSTFALTLFRKNAVL--EDGTRTT-VDFWDTAGQERFTSMHPSYYYRAHACIMVFDVTRKATYKNLVQWYGELRQFCESIPCILVANKIDVDYNVTKKCFKFATQHNLPFFFVSAADGANVVQVFEEAIRLAIEHKRSGGDFVEDALTLL 585
            D LG+PD+KVILLGDSAVGKSKLVER++M+EY PRQLSTFALTLFRK   L  E+G RT  VDFWDTAGQERF+SMHPSYYY A ACI+VFDVTRK TY+NL  WY ELR++CESIPC LVANKIDVD NVT K FKFA  HNL F FVSAADG NVV+VF++A+  A + KR GGDF+ D L LL
Sbjct:   11 DSLGEPDVKVILLGDSAVGKSKLVERFMMNEYQPRQLSTFALTLFRKEVELDGENGKRTVKVDFWDTAGQERFSSMHPSYYYGATACILVFDVTRKVTYQNLANWYKELREYCESIPCFLVANKIDVDMNVTNKKFKFAETHNLEFSFVSAADGTNVVKVFKDAVEAAFKFKREGGDFMSDVLDLL 196
[Close]
BLAST of jgi.p|Trimin1|176353 vs. uniprot
Match: A0A8K1CGD5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CGD5_PYTOL)

HSP 1 Score: 266 bits (679), Expect = 6.070e-88
Identity = 131/187 (70.05%), Postives = 153/187 (81.82%), Query Frame = 1 
Query:   37 DDLGDPDLKVILLGDSAVGKSKLVERYLMDEYSPRQLSTFALTLFRKNAVLEDGTRTT----VDFWDTAGQERFTSMHPSYYYRAHACIMVFDVTRKATYKNLVQWYGELRQFCESIPCILVANKIDVDYNVTKKCFKFATQHNLPFFFVSAADGANVVQVFEEAIRLAIEHKRSGGDFVEDALTLL 585
            DDLG+PD+KVILLGDSAVGKSKLVER++M+E+ PRQLSTFALTLFRK   + D    +    VDFWDTAGQERF+SMHPSYYY A ACIMVFDVTRK TY+NL  WY ELR++CE+IPC LVANKIDVD NVT K FKF+  HNLPF FVSAADG NVV+VF++A++ A + K+ GGDF+ D L LL
Sbjct:   10 DDLGEPDVKVILLGDSAVGKSKLVERFMMNEFQPRQLSTFALTLFRKEVEIPDEKGKSQVIKVDFWDTAGQERFSSMHPSYYYGATACIMVFDVTRKVTYQNLTGWYKELREYCENIPCFLVANKIDVDLNVTSKKFKFSETHNLPFEFVSAADGTNVVKVFQDAVKAAYQFKKDGGDFMADVLDLL 196
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BLAST of jgi.p|Trimin1|176353 vs. uniprot
Match: T0R548_SAPDV (Rab family, other n=2 Tax=Saprolegniaceae TaxID=4764 RepID=T0R548_SAPDV)

HSP 1 Score: 264 bits (675), Expect = 2.470e-87
Identity = 125/184 (67.93%), Postives = 150/184 (81.52%), Query Frame = 1 
Query:   37 DDLGDPDLKVILLGDSAVGKSKLVERYLMDEYSPRQLSTFALTLFRKNAVLEDGTRTTVDFWDTAGQERFTSMHPSYYYRAHACIMVFDVTRKATYKNLVQWYGELRQFCESIPCILVANKIDVDYNVTKKCFKFATQHNLPFFFVSAADGANVVQVFEEAIRLAIEHKRSGGDFVEDALTLLD 588
            D LGD DLK+ILLGDSAVGKSKLVER++M+EY PRQLSTFALTLFRK   ++DG+   +D WDTAGQERF+SMHPSYY+ A ACI+VFDVTRK TY++L  WY ELR++CE++PC L ANKIDVD  VT K FKFA  HNL F FVSAADG NVV++FEEAI   +++K+ GGDF+ D L LL+
Sbjct:   13 DGLGDADLKIILLGDSAVGKSKLVERFMMNEYQPRQLSTFALTLFRKEFPMDDGSTAKIDIWDTAGQERFSSMHPSYYFGASACILVFDVTRKTTYQHLADWYKELREYCENVPCFLAANKIDVDLEVTNKKFKFAETHNLGFHFVSAADGTNVVKIFEEAIHAGLKYKKEGGDFMADVLDLLN 196
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BLAST of jgi.p|Trimin1|176353 vs. uniprot
Match: A0A024TW89_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A024TW89_9STRA)

HSP 1 Score: 264 bits (674), Expect = 3.870e-87
Identity = 130/196 (66.33%), Postives = 152/196 (77.55%), Query Frame = 1 
Query:    1 MAEVSRGSSADTDDLGDPDLKVILLGDSAVGKSKLVERYLMDEYSPRQLSTFALTLFRKNAVLEDGTRTTVDFWDTAGQERFTSMHPSYYYRAHACIMVFDVTRKATYKNLVQWYGELRQFCESIPCILVANKIDVDYNVTKKCFKFATQHNLPFFFVSAADGANVVQVFEEAIRLAIEHKRSGGDFVEDALTLLD 588
            MAE  R      D LGDPD+K+ILLGDSAVGKSKLVERY+M+EY PRQLSTFALTLFRK+  + DG    +DFWDTAGQERF SMH SYY+ A ACI+VFDVTRK TY++L  WY ELR++CE++PC L ANK+DVD  VT K FKFA  HNL F FVSAADG NVV++FEEAI+ A++ K  GGDFV D L  L+
Sbjct:    1 MAEECRVEG--DDGLGDPDVKIILLGDSAVGKSKLVERYMMNEYQPRQLSTFALTLFRKDFTMPDGKTVKIDFWDTAGQERFNSMHSSYYFGAAACILVFDVTRKTTYQHLADWYKELREYCETVPCFLAANKVDVDVEVTNKKFKFAETHNLGFSFVSAADGTNVVKLFEEAIQAALKFKSEGGDFVSDVLDFLN 194
[Close]
BLAST of jgi.p|Trimin1|176353 vs. uniprot
Match: A0A2D4BD48_PYTIN (Rab family, other n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BD48_PYTIN)

HSP 1 Score: 262 bits (670), Expect = 1.470e-86
Identity = 133/199 (66.83%), Postives = 156/199 (78.39%), Query Frame = 1 
Query:    1 MAEVSRGSSADTDDLGDPDLKVILLGDSAVGKSKLVERYLMDEYSPRQLSTFALTLFRKNAVLEDGTR----TTVDFWDTAGQERFTSMHPSYYYRAHACIMVFDVTRKATYKNLVQWYGELRQFCESIPCILVANKIDVDYNVTKKCFKFATQHNLPFFFVSAADGANVVQVFEEAIRLAIEHKRSGGDFVEDALTLL 585
            M++ ++  + D DDLG+PD+KVILLGDSAVGKSKLVER++MDE+ PRQLSTFALTLFRK   LED         VDFWDTAGQERF+SMHPSYYY AHACI+VFDVTRK TY+NL  WY ELR++CE+IPC LVANKIDVD  VT K FKFA  HNL F FVSAADG NVV++F++A+  A + K  GGDF+   L LL
Sbjct:    1 MSDDAKRETPD-DDLGEPDVKVILLGDSAVGKSKLVERFMMDEFQPRQLSTFALTLFRKEVELEDERGKPQIVKVDFWDTAGQERFSSMHPSYYYGAHACILVFDVTRKTTYQNLANWYKELREYCENIPCFLVANKIDVDLAVTNKKFKFAETHNLEFEFVSAADGTNVVKLFKQAVAAACKFKADGGDFMATVLDLL 198
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|176353 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZG89_9STRA1.180e-139100.00RTW, ras superfamily GTPase n=1 Tax=Tribonema minu... [more]
D7G647_ECTSI2.770e-10580.43RTW, Ras superfamily GTPase n=2 Tax=Ectocarpus Tax... [more]
A0A125SEA6_9STRA1.170e-9473.63RABL2 n=1 Tax=Trachydiscus minutus TaxID=1032745 R... [more]
A0A6G0WRD6_9STRA8.330e-9171.20Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A7S2XUJ5_9STRA6.990e-9066.67Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
H3GJM6_PHYRM1.830e-8973.12Uncharacterized protein n=14 Tax=Phytophthora TaxI... [more]
A0A8K1CGD5_PYTOL6.070e-8870.05Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
T0R548_SAPDV2.470e-8767.93Rab family, other n=2 Tax=Saprolegniaceae TaxID=47... [more]
A0A024TW89_9STRA3.870e-8766.33Uncharacterized protein n=2 Tax=Aphanomyces TaxID=... [more]
A0A2D4BD48_PYTIN1.470e-8666.83Rab family, other n=1 Tax=Pythium insidiosum TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_136contigContig_136:339785..347288 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|176353|e_gw1.136.46.1
BRITEko00000,ko03029,ko04031,ko04131
KEGG koko:K07883,ko:K07931,ko:K07976,ko:K17977
GOsGO:0000001,GO:0000003,GO:0000131,GO:0000166,GO:0000242,GO:0000902,GO:0000904,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005783,GO:0005813,GO:0005814,GO:0005815,GO:0005856,GO:0005929,GO:0005933,GO:0005934,GO:0005935,GO:0006810,GO:0006928,GO:0006996,GO:0007005,GO:0007017,GO:0007018,GO:0007029,GO:0007030,GO:0007275,GO:0007338,GO:0007399,GO:0008150,GO:0008594,GO:0009566,GO:0009653,GO:0009987,GO:0010256,GO:0010970,GO:0012505,GO:0015630,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019953,GO:0022008,GO:0022414,GO:0022607,GO:0030030,GO:0030031,GO:0030154,GO:0030182,GO:0030317,GO:0030427,GO:0030705,GO:0030990,GO:0030992,GO:0031503,GO:0031514,GO:0032501,GO:0032502,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032989,GO:0032991,GO:0035639,GO:0036064,GO:0036094,GO:0036126,GO:0040011,GO:0042073,GO:0042461,GO:0042995,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044450,GO:0044463,GO:0044464,GO:0044703,GO:0044782,GO:0046530,GO:0046907,GO:0048308,GO:0048309,GO:0048311,GO:0048313,GO:0048468,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0048870,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051645,GO:0051646,GO:0051649,GO:0051674,GO:0051704,GO:0060271,GO:0070925,GO:0071840,GO:0097159,GO:0097223,GO:0097225,GO:0097367,GO:0097722,GO:0097729,GO:0099111,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:1901265,GO:1901363
Preferred nameRABL2B
DescriptionGTPase activity
COG categoryJ
Max annot lvl2759|Eukaryota
EggNOG OGsCOG1100@1|root,KOG0087@2759|Eukaryota
Evalue4.55e-106
Seed ortholog2880.D7G647
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionRTW, Ras superfamily GTPase
Ec32 orthologEc-11_005150.1
TranscriptId176675
TrackFilteredModels1
ProteinId176353
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|176353gene_16770Tribonema minus UTEX_B_3156 geneContig_136 339785..347288 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|176353Trimin1|176353|e_gw1.136.46.1Tribonema minus UTEX_B_3156 polypeptideContig_136 339785..347288 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_16770_7exon_16770_7Tribonema minus UTEX_B_3156 exonContig_136 339785..339874 -
exon_16770_6exon_16770_6Tribonema minus UTEX_B_3156 exonContig_136 340665..340751 -
exon_16770_5exon_16770_5Tribonema minus UTEX_B_3156 exonContig_136 341450..341591 -
exon_16770_4exon_16770_4Tribonema minus UTEX_B_3156 exonContig_136 342346..342427 -
exon_16770_3exon_16770_3Tribonema minus UTEX_B_3156 exonContig_136 343444..343523 -
exon_16770_2exon_16770_2Tribonema minus UTEX_B_3156 exonContig_136 344499..344548 -
exon_16770_1exon_16770_1Tribonema minus UTEX_B_3156 exonContig_136 347226..347288 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_16770CDS_16770Tribonema minus UTEX_B_3156 CDSContig_136 347226..347288 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_16770 ID=mRNA_16770|Name=jgi.p|Trimin1|176353|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=594bp|location=Sequence derived from alignment at Contig_136:339785..347288- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGGAGGTCAGCCGGGGATCGAGCGCTGACACAGATGACTTGGGCGA
CCCTGATCTGAAGGTCATACTGCTGGGGGACTCCGCGGTGGGCAAGTCGA
AGCTCGTGGAGAGGTATCTCATGGACGAGTACAGCCCGCGGCAGCTCTCG
ACGTTCGCCCTCACGCTCTTCCGCAAGAACGCCGTGCTGGAAGATGGCAC
GCGCACGACGGTGGACTTCTGGGATACGGCGGGGCAGGAGCGCTTCACCA
GCATGCACCCGTCGTACTACTACAGGGCTCACGCGTGCATCATGGTCTTC
GACGTCACGCGCAAGGCCACGTACAAAAACCTCGTGCAGTGGTACGGCGA
GCTGCGGCAGTTCTGCGAGAGCATCCCGTGCATACTCGTGGCCAACAAGA
TCGACGTGGACTACAATGTCACAAAAAAGTGCTTCAAGTTTGCGACTCAG
CACAACCTGCCATTCTTCTTTGTGTCCGCGGCGGATGGCGCCAATGTGGT
GCAGGTCTTCGAGGAGGCAATACGCCTGGCGATAGAGCACAAACGGAGCG
GCGGCGACTTTGTGGAAGATGCGCTGACGCTGCTAGACAGCTGA
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protein sequence of jgi.p|Trimin1|176353

>Trimin1|176353|e_gw1.136.46.1 ID=Trimin1|176353|e_gw1.136.46.1|Name=jgi.p|Trimin1|176353|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=198bp
MAEVSRGSSADTDDLGDPDLKVILLGDSAVGKSKLVERYLMDEYSPRQLS
TFALTLFRKNAVLEDGTRTTVDFWDTAGQERFTSMHPSYYYRAHACIMVF
DVTRKATYKNLVQWYGELRQFCESIPCILVANKIDVDYNVTKKCFKFATQ
HNLPFFFVSAADGANVVQVFEEAIRLAIEHKRSGGDFVEDALTLLDS*
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mRNA from alignment at Contig_136:339785..347288-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_16770 ID=mRNA_16770|Name=jgi.p|Trimin1|176353|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=7504bp|location=Sequence derived from alignment at Contig_136:339785..347288- (Tribonema minus UTEX_B_3156 )
ATGGCGGAGGTCAGCCGGGGATCGAGCGCTGACACAGATGACTTGGGCGA
CCCTGATCTGAAGGTGTGCATCGAAGCAGGCAGAAGTAGCAAGACTACGC
ACCAGTACTTCGCAACATACATCCAGAAAACGATATTCTGTACGAGTTCC
TCTGGCGTACATGCGGCCTCGCCAGCTGCCATCGCTGAAGCATTGAAGGG
AAACATGTGAAAAGTAACACAGTTTATTATGCAGGTTAAGCCCGCAAAAG
GAGACTCCGGAGTTGCCAGAGATCCAATCAACATCTCAGACTAGAGTGCG
CAGGGGGGGGGGGGAGTCAATTATCGACGTCATGTAGAAGTGATCGTCGT
TGCGCATTGAGACACTTGCAAGTTTCACAGGACACATGCAGATTCTGGTA
GCAAGCTGAACTTTTACCCTCTGGGCTTTTTCGCGCCCTAAGGAAGAATA
ATCAAGAAGTACACTACAGTACAGCCAGCCGGCATCGTGGTGTGACAACT
GCACTACTCTTCACCACGGTTGCTCAACCAGACCTGCAGGGGCGTGCATG
CCATTTATGCCACCGGCCTGGAAGTTGTCTGTCGCCAATCTATGCGTGCA
CAACGTGAAGGTGCGGGAAGGCTCTGTGGTGCACAACAACACGATGCAAG
TGCTGCAGCGCACGCGACACAACACAATACGAGGATGCTTCTTCAGCTGC
ACCGCATACCCACATACCAGGCGCATACATACATACCAGGCGCCTCAAGG
ATGTCACGTCCAGAAGGGTAGCGAGCCCAGGTAGCATTGCTCGTGTGTCC
CGGACTGACAACGCGCTGAGACAAGCGGAATGCGCGTAGCTGGCATACCT
ACCCACCGGCTTGAGCGGCATCAATGGGAGGCATCAAAGAAGTGAAGATT
TTTGCGCCAACCGTGCTGGTTTTTTTTCACATGATAGGGGACAAACTGCA
GCGAAGGCGCTGCGGGGGTCCCTAACCCTAACCCTCATTGTGACCTGCAG
GCCGTCGCGCTCAGCCTTGTCAGAGAGTGACAGCGCCGGCGCAGTGGTCA
GTGACTCCTGCACTGCGCAGAAACTTGCGTCACGTAGGCATTGCAAGTAA
CGCCAGGCTTAGACCCAAGGTCTACTGAGCAATGTTTTGCGCGTTAGGGT
GAGCGTCAGAAGGTCAGAAGGTGAAAGCGCCGGCGCAGTGGTCATTGACT
CCTGCCGTGGCCACGAACCTGCATCACGTAGGCATCGAAAGTAATGCCGG
GCTCAGAATCAACCAGGGTCTACTGAGCAGTGTGGCATGATGTCTCTAGC
GCCGAGATCAGCAGAGCGATTCTGAAATCTAACATCGCCCTTGCGGCCTG
GGCTGCGCAGGGGGTGCTTTAGGTGCCCAAAACGCTCAAGTGCACGACGC
GTTGACCTGCGGGAGTGCTGCCCCATTGCTCAGCAGCAGCGCTCATCTCC
GCAGCGTGCGGCGAACACTTTCGTATAAGTCAAATCGATTCTGTGGGTAG
GGAGGTTCTCGGCAGCAACAGCGCAATTCAGGCACGCGTTGCGATTGCCA
TTGGCGTCACACGCAGCAAATGTGGAGTTTGGCACTGTGTCACTGCGTGT
GTGCGGCTGCAGCGGCGGCTGCTGCTGCTGCCATGCGCAGCAGCGGCTGA
TGCCGCCGCGCCATATGATCCCGTACCTGAGCGCTGCTGCCAGCACCGCA
CGGCAGCAGCAAAATCACGTCTGTGCGCCCAGGTGTCATCGACGCAGCGC
AGTACCTGTACTATCTGCACGGCACCACGTGCACCGTAGTATACTACATG
TACTGCGCTGTACTGTACAACACTACATGTACGATACCAGGTCCCGAGCG
TCGTTGTAATGACGCCACCTGGGCCCAAACGTTCGAGCAGTTGTCGGAAC
ATCCCATGCGCGGCACACAAACACAAACACCCACCGGCGTCGGTTGTAGA
TGAATTATATGAACACCATGTCCGCACACACGCAGGATTCAAATAAACTG
AGCACCAGCACCTAGGAGCCCCAATGTGCTGCATGCGAACGCGACGCAAG
CGTCAGCACCGGTTGTAGATTGACTCCGCACAACATCCGCACGGGCGCGA
GTTAGAGAATGCTGAGCATCAGCATCGCAGAGGGTTGAGCGGTGCTGCGG
ACATGGTTGCGTGTGATGCGGAGCGCTGCTTCGGAGCTGTGAGCGGCAGC
CGTCGTGCCGCGGTGTGGGGTTGCCATACCTTGAACCTCAGGTTGAAGTC
GTGGTACAGCAGCTGTGCGTGTGCAGGCGCAGTCCTCCATGGCGTGTGTT
GACATCCGCGCACGAAGCCCTTCGGCTAGGGGTAAAGAACATGTCACGCA
CTTCCATCGTGGCAACGATGTTGCGGCAACGATTCTGATGATGGCAAGGT
CCATCATATTGACATCATGTTAGCGTCGTGATGCGATGGCCACATCCAAG
GCGCATTACGCAGCTGCCGCCGTACTGGACCGTTCATCATACAACTCATA
TTGCATTATGACATATCATCGTGATGCAATGGCCGCGGCTGTCCACATCT
AAGACGCGCGACGCATCTGCCGTCGTGATGGACCAGGAATCGTACCTTCA
CTGCATCATGATATCATCATGTATCATCATGTTGTGATGGCAGCACTTGA
CGACCTTCAAAGGCGCATTGCACATCTGCCGTTGTGATGGACCATTCGCT
GTACACTCACTGCGATGCATGGGTGACCCCCGTCCCACAGGTCATACTGC
TGGGGGACTCCGCGGTGGGCAAGTCGAAGCTCGTGGAGAGGTGAGTCACG
CGGAGCAGTGCCGCACTAACTTCAATTTGCTGCTGAAGCGCGACGCTTCA
TCTCAACGGCAACTGTAGGAGGGTGACGGCGCTCATGCCCAAATCAGAAT
TAGGGATGGGGTAAGGTTTACAGGTATCGCGCTCATGGTGCCAGAGTATA
CCTGCATATCCTCGACGGGCTGCTCGCCGCGGAGCACAAGATAGGCGTAC
AGTCAGGTTATCTAACCCTAACCGCGGACGTCTGAGACGCGCGAGCCCCG
TGAGTCACAATGAGCACTGCCATGCTAATATCAACTTGCTGTTGAAGCGC
GACGCTTTATCTCAACGGCAGCTGCAGGAAGGTGACCGCGCTCATGCTCG
AATCAGGATTAGCGGTAGCGTTGGGTTTTAGAGGTAGCGCGCTCATACTG
CCCGAGTGTACCTGCATACCCTCAACGTGCCGCGCCCCGCTGAGCGCGCA
ATAGGATTAGGTGTTGGGGTTAGGGTTAGGGTTAGGGCCAGCGTTGGGGT
TAGATTACCCGACCCCAAGCCGTCGTCGACACTGCGAGTGCTCCAGAGGC
GCGAGCGACTTAGGGTTAGCGTTAGGGTTATGGCGGCGGCGGCCAGTGCG
AGCGCTGCACCGGCGCCTGCGCTTGCCCCTCGGCGACGATGGCGAAGCGC
CGTGAGCGCGTGTGCTGAGCGCTGCGGCATGGAGCGAGCGCCAATCCGGC
GCGCCTGCGCGGCGACGGCGCTCGCAAGCGGCAGCTGTGTGCGGGCGCCG
CAGAGCCGAGGACCGCTCGGCCTTCCTTCACTGGCATCCATGCTGAGCGC
TGCTTCGCTTATCGCTTCGCGTTTTGGCTCCCAGCGACTGCGGTGCGAGA
TGCCCACGAAATCTTCTCACGGCACTGTGAGCGGCGCCTGCCGCTGCGCC
GTAACTGCCACCGCTGTAACTGTCGTGTAACCATAAATGTTGATTGCTCT
GCGCGGCGCGCGCAGGTATCTCATGGACGAGTACAGCCCGCGGCAGCTCT
CGACGTTCGCCCTCACGCTCTTCCGCAAGAACGCCGTGCTGGAAGGTGAG
TCGCAGGCGGCCTCAGTTCGCGTGCAATGACGCATGTTGGTGTTAGGTCT
TCAACGAGCATTGAAGAGGCACCGCAGGCGAGCGACTCTGACGCGCCCAC
GCCCAACCTGCACAGTGACCGTGTGCGTCACCATTGAAGTTGAAGTCATG
ATACACGATGACGCTCCGCACTGATCGTGCCGATCGTGAACGCAGCGGAG
CCGTGCTCAGTCAACAGAGGGGTATTACTCAGGCGTGCTGCTGTTGCTTT
TGCCTCTTGCACGCAAAGCCGTTTCACGTCACGAGAATCATTTGCATGCG
CGCACCGCTGCCGGCTGAGGGCACGTATGTATTCAGCGCCTAGATCAACG
CATACAGCATCCACTCCAGCCCGCCTGCCTGCCGCCGTGTAGACGGAAGC
TGAGCGCTGCCACGATTGAGCGCTGCCGCTGTGCTTTGCCGATGGCCTGC
GCGTGACGAGCGCTTTCCAGACGCTTTTCTCACAGTACCGGTCGACGCAC
ATGCGTGCCGTGTCGAGAGAACTAAACCAGGCACTGCGCGCTGTCGCTCT
GCTCTGCTCTGCTCCACTCTGCTCTGCCGATGCCCACGCACGACAGCTGG
GCTAGGTTTAGTTGCTAACCCTAGCCCTAACACTCTGGCCGCACGCCCGA
TCTGCAGAACAGCGGTGGCCGCCGCCCGCTGCGCAGACGGCACACATGCG
ATGTTGTGTTTATTTGGCTGTTTGGGGTAGATATCCAATCATACGACTTA
GCATGGGAGCATGCCTCGTCGAGAACGCTGCACGCACGCGTGCTGCTGCC
GCGCCATACGTGCAAGTGCAGCGCGCTGCCGCGGCCGGGATCTGCTGCCG
CGCCGTGCATGCAAACGCTGCGCTTCGAACGCTCAACTCCACATGTTGCT
GCGCTACCGGCGCTGCGCTGATGGTCAAAATTGCCAAACATCAAAATATT
CTGCTCGAACTAAGCTCAGGTCAGGTGAACATCACACGCTGCCTGCCGCT
GTGCCGCGCAGATGGCACGCGCACGACGGTGGACTTCTGGGATACGGCGG
GGCAGGAGCGCTTCACCAGCATGCACCCGTCGTACTACTACAGGTGCGCA
GGCAGCGCATCGCGAGTAGTTGAAAAACACACATTAGTGTAGCTCGTGTA
GTACTGTGTCGTACGCGAGGGCGGGGGCACTGCGCCTGAGCGGCACTGAA
CATGGGGCACTAAACATGCAGCTCTTGTTGTACTTTGTCATACGTGAGCA
GTCTCTCAGCCGTTGTCGCACTGCCGCAGCGCTGACTCGCGAGAGCATGC
GTCCTATAGCGCCGGTCTAATAGCGACGGTCTCTCTTCCAGTTCACCTGC
GGAGCGCTGGCGCGCGTCCCCCCCCCCCCCCCCCCCCTCTTATGCGAGCA
GAGCCGCCATCAGCACGCAACAGCGTGCGCCCCCTGTGCTGCGCGGTACA
CACGAGCGTGGAGCGCTGACGCCGGACCCCGGCACAGTACACTGAGCAGT
GGCTCAGATGCGGTACATGCAATCACATTGACACGCTGCGGCACCTGGCG
CCTCAGAATGCGCGGCGCGCTCAGCGGTGGCGTGCTTCGCGCGGAGGCTG
AACAGGGGGCTAGGGGAGGGGGCAGGGCATCATGGTCTGTGACGTGACGC
GCAGGGCTGGTATGCCGTATGATACCGAATATATACTACCCATGCATTCC
TCACTGCGTGCGCTGCCTGAGGCTCACACGCGCGACATGCTGCTCGATGT
GACGTGCAACGCTGGCAAGGCAGGCACCAGTTCGTATGCTCTGTATCTGC
ATACCTTTACATACCTAACCCCTGTGCCCCTCACCTCCCCCCCCCAGGGC
TCACGCGTGCATCATGGTCTTCGACGTCACGCGCAAGGCCACGTACAAAA
ACCTCGTGCAGTGGTACGGCGAGCTGCGGCAGTTCTGCGAGAGCATCCCG
TGCATACTCGTGGCCAACAAGATCGACGTGGACTACAATGTGAGTCTGAG
TCGCTGCGGAGCGTCATCTTGCGCTGCCGCTGTTCGCGAAAGCATGCAGT
GCACACAGCTCGTGTGAACTACAATGTGAATCGGCCATTGCGCTGGTATG
GGGGGGAAGGGAGTCGAAGCCGCTGACAGCAGCACCACCTGGGGGAACCC
CAGCATCTCCACTGCTGGTGGCGCTGTCGCTGCTGCGCCCCCTTCTCAAA
CCTCTTCTGCCTCGCCCTGCCGCCTGCCTCGCTCGAGGTTGAGCCCCATT
GCGGAGCGCTGTCGTGCAGGGCGCGCTTCGCGAAAGCATGCAATGCACAC
AGCTCTGCGCCTCATGTCGGTTCTGGTTGAGAGTACGTGGCCAAAAGCAA
CGCCATTTGTATCAGCAGATGCACGCGGTCCCCCAGCATTGGGTATTCGG
CGCTGCTTTTGAGTTTGTGACCCCAGTTACCGTCTGGTGCCTGGTGCTCA
GCAGCTTCAAGCAACTTGAATGTCGGCGGCGCGCGTTTTGCAGATTTGGT
GCCAAGCACTTCGACGGCATGTTGCACTCATACTGCGCTTGTAGTGTAAT
ACTACTAGTATGTGGAAGTACATACACATATGGAAGTATACCAGAAGTAT
ACTGTATGTTTATTCATAGACACGCACACTCTCAGGCTCTCACTGCCCGT
CCTCTGCGCTCCGTACCGCTGGCCGCCCCCTCGTCAGGTCACAAAAAAGT
GCTTCAAGTTTGCGACTCAGCACAACCTGCCATTCTTCTTTGTGTCCGCG
GCGGATGGCGCCAATGTGGTGCAGGTGAGGCCACCGATTGTTTCGCAGCG
ATTACGTCATGTAACTGACAGGCGTCGCCACATCGCGCTCAGAGTGCTCT
CAGCTCCAATGCAGTGCCCTTGATCATGGTCGGCCGCACCTCGTTTCTGT
ACGCTGCGCAGGCAGACGTACAACTGTACTGTATCTGCAGGCAAAGCGCA
TGCACGTCGTCAGACAATGGTATGAATGTCGAGTGATCGTGCGGCGCCTG
CACAGGCAAAGTCACGGGCAGACGCCGCGCGCATGCACTGCTGAGCGCTT
GTCCCCTGGCACCCCCCTCTACGTACCCCCCATAGCGCCTGCACGCGGCA
GCATCGAAGCGAAGTGACTGCGCGGCGCCGCTCACCGACGGCGTGCTGTG
CAGTGCGCGTGGCATATGCCTACTAGTACTGTCTCGATCATCATGATGGC
AGCCCGGGGGCCGCGCATCAAAGCGCTGCGAGCCTTCAATCTGAGTTCAG
CAGCGCTCTGCGTCGGCCTCACCTTGCCATCACCAATCTGGAATGCCAGA
CAGTGGGCCCGGGGGCGGGGGGATCTCATGACAGTGCTATGTACGGCATG
TGCTCACCGAATCGAGCCATGCGTCTGATATCCTGTCTAGTGTATGAACC
CTCTTCTTGTTCTTGTGGCTGAAACAAATTGGATGCACGTGCCTCAAAGC
CTCGCACATGTGCATTGATGGCGGAGGAAACATGCGCTGGGACCATTATG
GCGCCGCACATTGGCGGGCCAACCTGAAAGCTGCTTCTCTCCTCCGCGCC
ACGCGGTCTCGCAGGTCTTCGAGGAGGCAATACGCCTGGCGATAGAGCAC
AAACGGAGCGGCGGCGACTTTGTGGAAGATGCGCTGACGCTGCTAGACAG
CTGA
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Coding sequence (CDS) from alignment at Contig_136:339785..347288-

>mRNA_16770 ID=mRNA_16770|Name=jgi.p|Trimin1|176353|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=594bp|location=Sequence derived from alignment at Contig_136:339785..347288- (Tribonema minus UTEX_B_3156 )
ATGGCGGAGGTCAGCCGGGGATCGAGCGCTGACACAGATGACTTGGGCGA
CCCTGATCTGAAGGTCATACTGCTGGGGGACTCCGCGGTGGGCAAGTCGA
AGCTCGTGGAGAGGTATCTCATGGACGAGTACAGCCCGCGGCAGCTCTCG
ACGTTCGCCCTCACGCTCTTCCGCAAGAACGCCGTGCTGGAAGATGGCAC
GCGCACGACGGTGGACTTCTGGGATACGGCGGGGCAGGAGCGCTTCACCA
GCATGCACCCGTCGTACTACTACAGGGCTCACGCGTGCATCATGGTCTTC
GACGTCACGCGCAAGGCCACGTACAAAAACCTCGTGCAGTGGTACGGCGA
GCTGCGGCAGTTCTGCGAGAGCATCCCGTGCATACTCGTGGCCAACAAGA
TCGACGTGGACTACAATGTCACAAAAAAGTGCTTCAAGTTTGCGACTCAG
CACAACCTGCCATTCTTCTTTGTGTCCGCGGCGGATGGCGCCAATGTGGT
GCAGGTCTTCGAGGAGGCAATACGCCTGGCGATAGAGCACAAACGGAGCG
GCGGCGACTTTGTGGAAGATGCGCTGACGCTGCTAGACAGCTGA
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