mRNA_16723 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|176593 vs. uniprot
Match: A0A835ZB34_9STRA (APH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB34_9STRA) HSP 1 Score: 699 bits (1803), Expect = 1.840e-254 Identity = 342/342 (100.00%), Postives = 342/342 (100.00%), Query Frame = 1 Query: 1 MSHGGLQGRKAVICGGRVREALLYEMATAGSKFQGMVLPHSYYSHGSKLLGEYVVLLEDLRHRGGVGVNMIMGNQMWGVPDALRNLADPVTVLKQAFTQAALLHAAYWNDAALLKKHWLKGAAWYAGRDRWSWESGIRRARLSWARTKAAVSNGALAIKLDEGLAAIMDASLEAASWQALQAHLRDPRTPYTLCHGDFHAANMIFLKDAPSSSTSTSSGGELFAVDWTEVGPWEGTTDLAQMVISDVKPAVFEAHASALVRAYWQTLVAEGVSKESYSFSDCWEGFCRGGMERWLWLFAIMSSFFNIPPAAIQYFHDQLLAFSNAFGNGRTCYALKPVVCLP 1026 MSHGGLQGRKAVICGGRVREALLYEMATAGSKFQGMVLPHSYYSHGSKLLGEYVVLLEDLRHRGGVGVNMIMGNQMWGVPDALRNLADPVTVLKQAFTQAALLHAAYWNDAALLKKHWLKGAAWYAGRDRWSWESGIRRARLSWARTKAAVSNGALAIKLDEGLAAIMDASLEAASWQALQAHLRDPRTPYTLCHGDFHAANMIFLKDAPSSSTSTSSGGELFAVDWTEVGPWEGTTDLAQMVISDVKPAVFEAHASALVRAYWQTLVAEGVSKESYSFSDCWEGFCRGGMERWLWLFAIMSSFFNIPPAAIQYFHDQLLAFSNAFGNGRTCYALKPVVCLP Sbjct: 1 MSHGGLQGRKAVICGGRVREALLYEMATAGSKFQGMVLPHSYYSHGSKLLGEYVVLLEDLRHRGGVGVNMIMGNQMWGVPDALRNLADPVTVLKQAFTQAALLHAAYWNDAALLKKHWLKGAAWYAGRDRWSWESGIRRARLSWARTKAAVSNGALAIKLDEGLAAIMDASLEAASWQALQAHLRDPRTPYTLCHGDFHAANMIFLKDAPSSSTSTSSGGELFAVDWTEVGPWEGTTDLAQMVISDVKPAVFEAHASALVRAYWQTLVAEGVSKESYSFSDCWEGFCRGGMERWLWLFAIMSSFFNIPPAAIQYFHDQLLAFSNAFGNGRTCYALKPVVCLP 342
BLAST of jgi.p|Trimin1|176593 vs. uniprot
Match: A0A835YMN7_9STRA (APH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMN7_9STRA) HSP 1 Score: 601 bits (1549), Expect = 6.130e-214 Identity = 287/346 (82.95%), Postives = 313/346 (90.46%), Query Frame = 1 Query: 1 MSHGGLQGRKAVICGGRVREALLYEMATAGSKFQGMVLPHSYYSHGSKLLGEYVVLLEDLRHRGGVGVNMIMGNQMWGVPDALRNLADPVTVLKQAFTQAALLHAAYWNDAALLKKHWLKGAAWYAGRDRWSWESGIRRARLSWARTKAAVSNGALAIKLDEGLAAIMDASLEAASWQALQAHLRDPRTPYTLCHGDFHAANMIFLKDAPSS----STSTSSGGELFAVDWTEVGPWEGTTDLAQMVISDVKPAVFEAHASALVRAYWQTLVAEGVSKESYSFSDCWEGFCRGGMERWLWLFAIMSSFFNIPPAAIQYFHDQLLAFSNAFGNGRTCYALKPVVCLP 1026 MSH G+QGRK V+CGGRVRE L Y M AG KF+GMVLP YYSHGS++LGEYV+L+EDLRH+GGVGVNMIMGNQ+WGVPD LRNL DPV VL QAFTQAALLHAAYWNDAA+LKK WLKGAAWYAGRDRWSWESGIRRA+ SWARTKAAVSNG+LA+K+D+GLAA+MDASLEA SWQALQ HLR PRTP+TLCHGDFHAANMIFLKD +S STSTSSGGELFAVDW+EVGPWEGTTDLAQMVISDVKP+VFE HASALVRAYWQ LVAEGVSKESYSF DCWE FCRGGMERWLWLFA++S+ NIP +A+QYFHDQLLAFS AFGNGRTCYALKPVVC+P Sbjct: 111 MSHRGMQGRKTVLCGGRVREGLFYGMVMAGGKFRGMVLPRIYYSHGSEMLGEYVILMEDLRHKGGVGVNMIMGNQIWGVPDMLRNLPDPVAVLNQAFTQAALLHAAYWNDAAILKKQWLKGAAWYAGRDRWSWESGIRRAKRSWARTKAAVSNGSLAVKMDQGLAAMMDASLEATSWQALQEHLRSPRTPFTLCHGDFHAANMIFLKDNGASTSPLSTSTSSGGELFAVDWSEVGPWEGTTDLAQMVISDVKPSVFEPHASALVRAYWQALVAEGVSKESYSFGDCWEAFCRGGMERWLWLFAVISALPNIPHSAVQYFHDQLLAFSRAFGNGRTCYALKPVVCIP 456
BLAST of jgi.p|Trimin1|176593 vs. uniprot
Match: A0A1Y1Z1Y4_9FUNG (APH domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Z1Y4_9FUNG) HSP 1 Score: 290 bits (742), Expect = 1.280e-91 Identity = 158/341 (46.33%), Postives = 214/341 (62.76%), Query Frame = 1 Query: 13 GLQGRKAVICGGRVREALLYE-MATAGSKFQGMVLPHSYYSHGSKLLGEYVVLLEDLRH-RGGVGVNMIMGNQMWGVPDALRNLADPVTVLKQAFTQAALLHAAYWNDAALLKKHWLKGAAWYAGRDRWSWESGIRRARLSWARTKAAVSNGALAIKLDEGLAAIMDASLEAASWQALQAHLRDPRTPYTLCHGDFHAANMIFLKDAPSSSTSTSSGGELFAVDWTEVGPWEGTTDLAQMVISDVKPAVFEAHAS--ALVRAYWQTLVAEGVSKESYSFSDCWEGFCRGGMERWLWLFAIMSSFFNIPPAAIQYFHDQLLAFSNAFGNGRTCYALKPVVCL 1023 G+ R++ I G+ REA+ YE + T +K+ LP Y+++GS L G ++L+EDL + +GVN + GNQ+WG + L N D V VL++ F AA LHA +WND +LL + W+KGA WY GRDR WE I RAR SW K +++G +L I+D S + SW LQ HLRDP P+TLCHGDFHA NMI+++ + S +L VDW+EVG WE T DL Q +ISDVKP ++ + + L+R YW+ LV+ GVS E Y F C E + R +ERW+W+F++MS F +P AAIQYFHDQ+L+F A G+ Y LKPVVCL Sbjct: 131 GVNNRRSAISAGQFREAVAYEKLDTHYAKY----LPKIYFTYGSSLTGTQIILMEDLMGIKEAIGVNHLFGNQIWGANNTLSNPPDQVEVLQKMFGFAAELHAKHWNDRSLLNQDWVKGAGWYQGRDRARWELAIDRARSSWTLYKQHMASGDSGAQLAPKFIDIVDKSFASTSWDNLQKHLRDPTIPFTLCHGDFHAGNMIWVQ--------SDSEQQLRVVDWSEVGVWEPTADLGQTIISDVKPEIWRDNQTDIKLLREYWEKLVSLGVSAEEYPFDLCLERYERAPVERWIWVFSVMSMF-GLPAAAIQYFHDQILSFIEAHGD-HEAYILKPVVCL 457
BLAST of jgi.p|Trimin1|176593 vs. uniprot
Match: A0A1Y1Z373_9FUNG (APH domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Z373_9FUNG) HSP 1 Score: 285 bits (730), Expect = 1.300e-90 Identity = 157/344 (45.64%), Postives = 209/344 (60.76%), Query Frame = 1 Query: 1 MSHGGLQGRKAVICGGRVREALLYE-MATAGSKFQGMVLPHSYYSHGSKLLGEYVVLLEDLRH-RGGVGVNMIMGNQMWGVPDALRNLADPVTVLKQAFTQAALLHAAYWNDAALLKKHWLKGAAWYAGRDRWSWESGIRRARLSWARTKAAVSNGALAIKLDEGLAAIMDASLEAASWQALQAHLRDPRTPYTLCHGDFHAANMIFLKDAPSSSTSTSSGGELFAVDWTEVGPWEGTTDLAQMVISDVKPAVFEAHAS--ALVRAYWQTLVAEGVSKESYSFSDCWEGFCRGGMERWLWLFAIMSSFFNIPPAAIQYFHDQLLAFSNAFGNGRTCYALKPVVC 1020 MS G+ R I G REA++Y+ + T +K+ LP Y+++ S L G +++L+EDL + +GVN + GNQ+WG + L N D V VL++ F AA LHA YWND +LL + W+KGA WY GRDR WE I RAR SW K +++G ++L I+D S +ASW LQ HLRD + P+TL HGD+HAANMI++ + S +L DW+EVG WE T DL Q +ISDVKP ++ L+R YW+ LV+ GVS E Y F C E + R +ERW+WLF +MS F +P AAIQYFHDQ+L F A G+ Y LKPVVC Sbjct: 65 MSIAGVDSRSCAISAGHFREAVVYKKLGTHYAKY----LPKVYFTYDSSLTGTFIILMEDLMEGKEAIGVNHLFGNQIWGANNTLSNPPDQVEVLQKMFGFAAELHAKYWNDRSLLNQDWVKGAGWYQGRDRARWELAIDRARTSWELCKQRIASGESELQLAPKFIKILDKSFASASWDNLQKHLRDQKVPFTLTHGDYHAANMIWVH--------SDSEQQLRVHDWSEVGVWEPTADLGQTIISDVKPEIWRDSQMDIKLLREYWEKLVSLGVSAEEYPFDLCLERYERAAVERWIWLFGLMSVF-ELPVAAIQYFHDQILTFIEAHGDHEV-YILKPVVC 394
BLAST of jgi.p|Trimin1|176593 vs. uniprot
Match: A0A7S2ZM55_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZM55_9RHOD) HSP 1 Score: 278 bits (712), Expect = 2.500e-87 Identity = 152/348 (43.68%), Postives = 213/348 (61.21%), Query Frame = 1 Query: 4 SHGGLQGRKAVICGGRVREALLYEMAT-AGSKFQGMVLPHSYYSHGSKLLGEYVVLLEDLRHRGGVGVNMIMGNQMWGVPD------ALRNLADPVTVLKQAFTQAALLHAAYWNDAALLKKHWLKGAAWYAGRDRWSWESGIRRARLSWARTKAAVSNGALAIKLDEGLAAIMDASLEAASWQALQAHLRDPRTPYTLCHGDFHAANMIFLKDAPSSSTSTSSGGELFAVDWTEVGPWEGTTDLAQMVISDVKPAVFEAHASALVRAYWQTLVAE-GVSKESYSFSDCWEGFCRGGMERWLWLFAIMSSFFNIPPAAIQYFHDQLLAFSNAFGNGRTCYALKPVVCL 1023 SH G +GR+ VI G RE L Y AG K + P YYS GS LGEYV+L+EDL + ++ GNQ+WGVP+ + R +PV VL + F Q A ++A ++ND LL++ WLKG+ W+ R SW S IR A+ S A K + + +K+ + L +I++ SL+ +SW+ L HL+DP+TP+TLCHGD HA N++ K +G ++ VDW EV WE DLAQM+ISDVKP+VF H+ ALV YW+ L+++ G++++ Y F CWE FC GG+ +WLW+FAIM+ +P +QYFHDQLLAF AF + R + L+ VV L Sbjct: 106 SHNGWKGRRNVIASGAYREPLFYSSPLLAGLKDTQLSCPTVYYSFGSATLGEYVILMEDLTEQTQ-NAGLVFGNQIWGVPENFTEEFSKRPEFEPVRVLYRVFEQQADMNAMFFNDPTLLEQKWLKGSEWHVDSGRMSWVSSIRSAKRSLAAAKQRLLSDP-ELKISKKLISILERSLDVSSWELLIRHLKDPKTPFTLCHGDLHAKNLLLTK----------AGDQVLHVDWAEVCVWEPGVDLAQMLISDVKPSVFREHSEALVTHYWERLISKAGLTEKDYPFEGCWESFCSGGVGKWLWVFAIMAGIPKLPAPLLQYFHDQLLAFIEAFCD-RPFFELRSVVLL 440
BLAST of jgi.p|Trimin1|176593 vs. uniprot
Match: A0A1Y2GL19_9FUNG (APH domain-containing protein n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GL19_9FUNG) HSP 1 Score: 275 bits (704), Expect = 8.550e-86 Identity = 144/328 (43.90%), Postives = 192/328 (58.54%), Query Frame = 1 Query: 4 SHGGLQGRKAVICGGRVREALLYEMATAGSKFQGMVLPHSYYSHGSKLLGEYVVLLEDLRHRGG----VGVNMIMGNQMWGVPDAL--RNLADPVTVLKQAFTQAALLHAAYWNDAALLKKHWLKGAAWYAGRDRWSWESGIRRARLSWARTKAAVSNGALAIKLDEGLAAIMDASLEAASWQALQAHLRDPRTPYTLCHGDFHAANMIFLKDAPSSSTSTSSGGELFAVDWTEVGPWEGTTDLAQMVISDVKPAVFEAHASALVRAYWQTLVAEGVSKES-YSFSDCWEGFCRGGMERWLWLFAIMSSFFNIPPAAIQYFHDQLLAF 966 S G + R I G+ REA+ Y A +LP YY++GS+ LGEYV+L+ED++ R G V VN + GNQ+WG+P + +L +L+ F AA HA +WND LL+ WLK A WY G +R WE ++ +W KA + G +K E I+D + E ASW LQ L+D P+TL HGDFHAANMI + PSSS+ T DW+EVG WE TTDL Q VISD+ +F+ HA ++ YW+ LV GV K + Y+F CW F RGG+E+WLW+F I+SS+ +P +QYFHDQLLAF Sbjct: 123 SRDGYKDRLGNILSGQTREAIFYSSDLAKELVPKTLLPKIYYAYGSQWLGEYVILMEDVKQRHGSPGPVDVNFVFGNQIWGIPPTIDRSSLPSAPAMLEHMFLTAAETHAQHWNDRRLLELTWLKTAGWYHGLNRIQWEWSVQAGAQAWEMGKAKATKGDFPVKYSEKFVKILDEAFERASWDKLQQRLQDKSVPFTLAHGDFHAANMILDRSVPSSSSIT-------LYDWSEVGVWEPTTDLGQTVISDMAIPIFQEHARPALKKYWERLVQLGVVKPTEYTFETCWRSFLRGGIEKWLWMFGILSSYPGLPAPGVQYFHDQLLAF 443
BLAST of jgi.p|Trimin1|176593 vs. uniprot
Match: A0A197JBD4_9FUNG (APH domain-containing protein n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JBD4_9FUNG) HSP 1 Score: 271 bits (694), Expect = 4.790e-84 Identity = 147/351 (41.88%), Postives = 200/351 (56.98%), Query Frame = 1 Query: 25 RKAVICGGRVREALLYEMATAGSKFQGMVLPHSYYSHGSKLLGEYVVLLEDLRHRGG---------------VGVNMIMGNQMWGVPDALRNLADPVT--VLKQAFTQAALLHAAYWNDAALLKKHWLKGAAWYAGRDRWSWESGIRRARLSWARTKAAVSNGALAIKLDEGLAAIMDASLEAASWQALQAHLRDPRTPYTLCHGDFHAANMIFLKDAPSSSTSTSSGGELFAVDWTEVGPWEGTTDLAQMVISDVKPAVFEAHASALVRAYWQTLVAEGVSK-ESYSFSDCWEGFCRGGMERWLWLFAIMSSFFNIPPAAIQYFHDQLLAFSNAFGNGRT-CYALKPVVC 1020 R A I G RE + Y A S +LP YY+HGS LGEYVV++ED++ R V VN + GNQ+WGVPD++ + P + +L Q F AA +HA +WND +L K WLK WY G +R WE ++ A ++W + KA ++G +K E IMD++ + ASW+ LQ L+D P+TL HGDFHAANMI + +P+ + S + DW+EV WE TTDL Q +ISDV VF+ HA +R YW L+ G K E+Y F CW+ F RGG+E+WLW F I+ S+ +P A+QYFHDQ+LAF G+ Y + VVC Sbjct: 138 RLANIISGSSREVIFYGSDIAKSLLPSTLLPKIYYTHGSIWLGEYVVVMEDIKKRRAEELTQEASNSCRKPPVDVNFVFGNQIWGVPDSVDRASLPPSADMLDQMFLTAAEMHAQHWNDQSLFKLDWLKSTGWYKGSNRAVWEWSLQAADVAWEKGKAMSASGKFDVKYSEKFVKIMDSAFKRASWERLQKRLQDKTLPFTLTHGDFHAANMILDRSSPTEAPS------ICMYDWSEVCIWEPTTDLGQTIISDVPVVVFKTHARTALRKYWDRLIELGAFKPEAYPFETCWKSFVRGGVEKWLWTFGILCSYPGMPANAVQYFHDQMLAFIELAGDVEDDFYDITTVVC 482
BLAST of jgi.p|Trimin1|176593 vs. uniprot
Match: D2V2C6_NAEGR (Aminoglycoside phosphotransferase n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2V2C6_NAEGR) HSP 1 Score: 241 bits (615), Expect = 4.100e-73 Identity = 132/333 (39.64%), Postives = 189/333 (56.76%), Query Frame = 1 Query: 19 QGRKAVICGGRVREALLYEMATAGSKFQGMVLPHSYYSHGSKLLGEYVVLLEDLRHRGGVGVNMIMGNQMWGVPDALRNLADPVTVLKQAFTQAALLHAAYWNDAALLKKHWLKGAAWYAGRDRWSWESGIRRARLSWARTKAAVSNGALAIKLDEGLAAIMDASLEAASWQALQAHLRDPRTPYTLCHGDFHAANMIFLKDAPSSSTSTSSGGELFAVDWTEVGPWEGTTDLAQMVISDVKPAVFEAHASALVRAYWQTLVAEGVSKESYSFSDCWEGFCRGGMERWLWLFAIMSSFFNIPPAAIQYFHDQLLAFSNAFGNGRTCYALKPVV 1017 QGR+ V+ REAL Y G PH Y++G+ +GEYV+L++DL+ VG+N++ GNQ+WGV L P+ +LK+ + A +HA+ WN+ +LL+ +LK A +Y +DR WE G+ + R W K S + KL E L +++ S+E ASW++ Q + P+ LCHGDFH +N FL D + ++ A+DWTEVG TTDL Q +ISD+KP +F H+ LVR YW+ LV GVS+ Y F CW FC+ G+ERW+WL I +P + YF+DQ+LAF A G+ Y +K VV Sbjct: 98 QGRQTVLSWKPHREALFYASDLLEKVVAGPA-PHVLYAYGNGQVGEYVILMKDLKKPQTVGLNIVFGNQIWGVGKYDFELPQPLDMLKEMYLNIAKIHASNWNNRSLLQYEFLKAAKFYNQQDRELWEEGMAKTRKGWETAKKRSSESTV-FKLSEKLLNVIEKSMEKASWESFQESIN--AEPFALCHGDFHGSN--FLIDVATK--------KIDALDWTEVGLCTPTTDLVQTLISDIKPELFVQHSKELVRLYWEELVKNGVSETEYPFEKCWTSFCKDGVERWIWLLTICCEMTQVPDVLLNYFNDQILAFIEAHGD-LEYYVMKTVV 415
BLAST of jgi.p|Trimin1|176593 vs. uniprot
Match: UPI001CFC7FBA (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFC7FBA) HSP 1 Score: 215 bits (548), Expect = 3.260e-63 Identity = 124/333 (37.24%), Postives = 178/333 (53.45%), Query Frame = 1 Query: 19 QGRKAVICGGRVREALLYEMATAGSKFQGMVLPHSYYSHGSKLLGEYVVLLEDLRHRGGV-GVNMIMGNQMWGVPDALRNLADPVTVLKQAFTQAALLHAAYWNDAALLKKHWLKGAAWYAGRDRWSWESGIRRARLSWARTKAAVSNGALAIKLDEGLAAIMDASLEAASWQALQAHLRDPRTPYTLCHGDFHAANMIFLKDAPSSSTSTSSGGELFAVDWTEVGPWEGTTDLAQMVISDVKPAVFEAHASALVRAYWQTLVAEGVSKESYSFSDCWEGFCRGGMERWLWLFAIMSSFFNIPPAAIQYFHDQLLAFSNAFGNGRTCYALKPV 1014 Q R G+ RE L Y+ Q V + Y G + GEYV+L++DL+ V G N + GNQ+WG+P+ L +PV+VL+Q + A L+A +W D +LL +LK +Y G R WE G+ R +W K + L K E L I+D S E ASW+ +Q + + P+ LCHGDFHA+NM + EL DW+EVG W TDLAQ +ISDVKP + ++ L++ Y+ L G +SF CW FC+ G ERW+WLF++++S IP A++Y+HD LL+F + G+ Y LK + Sbjct: 91 QARAQSSARGQYREGLFYDSDLVE---QLEVSKNVLYGFGCEKTGEYVLLMKDLKTSDHVVGANFVFGNQVWGMPEMNVKLPEPVSVLEQMYLTCARLNAKFWKDPSLLSHGFLKACGFYKGEHRDVWEFGMANGRKAWEAAKERNAQSEL-FKFSEKLIGIIDRSYELASWENMQKAIHEE--PFALCHGDFHASNMFVNVE----------NLELSLFDWSEVGIWNPVTDLAQTLISDVKPEIVAQNSKHLLKTYYDELERCGADLSDFSFEACWNCFCKNGPERWIWLFSVLASLSFIPEIAVKYWHDNLLSFIESHGD-YPVYNLKSI 406
BLAST of jgi.p|Trimin1|176593 vs. uniprot
Match: L8HBF7_ACACA (Uncharacterized protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HBF7_ACACA) HSP 1 Score: 198 bits (504), Expect = 1.060e-55 Identity = 117/328 (35.67%), Postives = 172/328 (52.44%), Query Frame = 1 Query: 46 GRVREALLYE-----MATAGSKFQGM----VLPHSYYSHGSKLLGEYVVLLEDLRHRGGVGVNMIMGNQMWG-----VPDALRNLADPVTVLKQAFTQAALLHAAYWNDAALLKKHWLKGAAWYAGRDRWSWESGIRRARLSWARTKAAVSNGALAIKLDEGLAAIMDASLEAASWQALQAH--LRDPRTPYTLCHGDFHAANMIFLKDAPSSSTSTSS-----GGELFAVDWTEVGPWEGTTDLAQMVISDVKPAVFEAHASALVRAYWQTLVAEGVSKESYSFSDCWEGFCRGGMERWLWLFAIMSSFFNIPPAAIQYFHDQLLAF 966 G REA Y +AT GS + V+P Y++ GS G++VV++EDL G + ++GNQ WG P L+ + + +++Q F A +HAA+W D +LL WLK A W GR+R WE + R W K + G +K + + MD SL A SW+ Q + P TP+TLCHGDFHAAN++++ ++ G +++ VDW EVG T+LAQ +IS+ P + H L Y LVA+GV ++ CWE + RGG+ERWL + +M+ F +P A + +FHDQ+ AF Sbjct: 152 GNAREAYFYRNFASNLATLGSATERQEVRSVVPRVYHADGSWATGDFVVVMEDLSTTGARLGSHVLGNQCWGPVKGGFPAELQTESVGLQMIEQVFAAMADVHAAFWRDESLLGHSWLKAAEWLQGRERARWELAMDGMRSKWLGIKRTIEQGKTGVKWSDEVVRAMDDSLAATSWETYQRSFDVTKPTTPFTLCHGDFHAANILWVPGRERTADDGEGDGARIGSKVYMVDWPEVGIACPFTELAQFMISNASPELRRKHERRLFADYHARLVAKGVCGRTFPLEACWERYQRGGIERWLQMLTLMT-LFGLPDACVGWFHDQVAAF 478 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|176593 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_16723 ID=mRNA_16723|Name=jgi.p|Trimin1|176593|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1029bp|location=Sequence derived from alignment at Contig_139:94787..99251+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGTCGCATGGAGGTCTGCAGGGCAGAAAAGCTGTCATCTGCGGGGGGCGback to top protein sequence of jgi.p|Trimin1|176593 >Trimin1|176593|e_gw1.139.21.1 ID=Trimin1|176593|e_gw1.139.21.1|Name=jgi.p|Trimin1|176593|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=343bp MSHGGLQGRKAVICGGRVREALLYEMATAGSKFQGMVLPHSYYSHGSKLLback to top mRNA from alignment at Contig_139:94787..99251+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_16723 ID=mRNA_16723|Name=jgi.p|Trimin1|176593|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4465bp|location=Sequence derived from alignment at Contig_139:94787..99251+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_139:94787..99251+ >mRNA_16723 ID=mRNA_16723|Name=jgi.p|Trimin1|176593|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1029bp|location=Sequence derived from alignment at Contig_139:94787..99251+ (Tribonema minus UTEX_B_3156 )back to top |