mRNA_16612 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|353644
Unique Name	mRNA_16612
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|353644 vs. uniprot
Match: A0A835Z4Y5_9STRA (C2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4Y5_9STRA)

HSP 1 Score: 817 bits (2111), Expect = 1.430e-290
Identity = 620/620 (100.00%), Postives = 620/620 (100.00%), Query Frame = 2

Query:   92 MRGQLQTDVQRAEGLLMTKVIDVNAALAPKSLTLGXXXXXXXXXXXXXXXXXXXGKHTVMTTHQGGPALETHEEAPSTFVRVTVKGEAHCTATIAATTAPRWHASFAFDVDAEESDKIVYEVVSKAGGAEEVVGMRLTGVXXXXXXXXXXXXXXXXXXXXXXXXVNGDIXXXXXXXXXXXXXXGGVVVSNAGGVLEVVGVEVXXXXXXXXXXXXXVTIPFGKIWDGAVPLGAPHALLPPGAAAADPLASVGTLYFDCAWAEAPTAPPLVAQPAAVAKXXXXXXXXXXXXXXXXLPPPEFGAGAGDLIDWGAAKLAGPRPSVLRVESYYAAAKMVYGTVAHLPLVKMVSPIWEGVLESILQRTPLKPERTPLKAKHGAPEEGAEGHGTRVVDSIDRQIEGALNDVDELVDRKKDEALSSICNAKNVIKLVDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALKAETLRKVALTSAVDTTHSAASDIRPVETIMTTAGATRGAVGDAVHGAVASVQGFIGGIVDKXXXXXXXXKVHGTAHSAADAVLHAASDATGAAAXXXXTVKRXXGAXXGSAVDTVRSTVAPFAXXXXXXXXXXXXXXXXXXGAGGAKPATASA 1951
            MRGQLQTDVQRAEGLLMTKVIDVNAALAPKSLTLGXXXXXXXXXXXXXXXXXXXGKHTVMTTHQGGPALETHEEAPSTFVRVTVKGEAHCTATIAATTAPRWHASFAFDVDAEESDKIVYEVVSKAGGAEEVVGMRLTGVXXXXXXXXXXXXXXXXXXXXXXXXVNGDIXXXXXXXXXXXXXXGGVVVSNAGGVLEVVGVEVXXXXXXXXXXXXXVTIPFGKIWDGAVPLGAPHALLPPGAAAADPLASVGTLYFDCAWAEAPTAPPLVAQPAAVAKXXXXXXXXXXXXXXXXLPPPEFGAGAGDLIDWGAAKLAGPRPSVLRVESYYAAAKMVYGTVAHLPLVKMVSPIWEGVLESILQRTPLKPERTPLKAKHGAPEEGAEGHGTRVVDSIDRQIEGALNDVDELVDRKKDEALSSICNAKNVIKLVDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALKAETLRKVALTSAVDTTHSAASDIRPVETIMTTAGATRGAVGDAVHGAVASVQGFIGGIVDKXXXXXXXXKVHGTAHSAADAVLHAASDATGAAAXXXXTVKRXXGAXXGSAVDTVRSTVAPFAXXXXXXXXXXXXXXXXXXGAGGAKPATASA
Sbjct:    1 MRGQLQTDVQRAEGLLMTKVIDVNAALAPKSLTLGXXXXXXXXXXXXXXXXXXXGKHTVMTTHQGGPALETHEEAPSTFVRVTVKGEAHCTATIAATTAPRWHASFAFDVDAEESDKIVYEVVSKAGGAEEVVGMRLTGVXXXXXXXXXXXXXXXXXXXXXXXXVNGDIXXXXXXXXXXXXXXGGVVVSNAGGVLEVVGVEVXXXXXXXXXXXXXVTIPFGKIWDGAVPLGAPHALLPPGAAAADPLASVGTLYFDCAWAEAPTAPPLVAQPAAVAKXXXXXXXXXXXXXXXXLPPPEFGAGAGDLIDWGAAKLAGPRPSVLRVESYYAAAKMVYGTVAHLPLVKMVSPIWEGVLESILQRTPLKPERTPLKAKHGAPEEGAEGHGTRVVDSIDRQIEGALNDVDELVDRKKDEALSSICNAKNVIKLVDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALKAETLRKVALTSAVDTTHSAASDIRPVETIMTTAGATRGAVGDAVHGAVASVQGFIGGIVDKXXXXXXXXKVHGTAHSAADAVLHAASDATGAAAXXXXTVKRXXGAXXGSAVDTVRSTVAPFAXXXXXXXXXXXXXXXXXXGAGGAKPATASA 620

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|353644 vs. uniprot

BLAST of jgi.p|Trimin1|353644 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835Z4Y5_9STRA	1.430e-290	100.00	C2 domain-containing protein n=1 Tax=Tribonema min...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_175	contig	Contig_175:237448..247086 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|353644\|estExt_Genemark1.C_Ctg_1750027
Hectar predicted targeting category	other localisation
TranscriptId	353966
Track	FilteredModels1
ProteinId	353644

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353644	gene_16612	Tribonema minus UTEX_B_3156	gene	Contig_175 237448..247086 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_16612_20	exon_16612_20	Tribonema minus UTEX_B_3156	exon	Contig_175 237448..237673 -
exon_16612_19	exon_16612_19	Tribonema minus UTEX_B_3156	exon	Contig_175 238462..238536 -
exon_16612_18	exon_16612_18	Tribonema minus UTEX_B_3156	exon	Contig_175 238625..238772 -
exon_16612_17	exon_16612_17	Tribonema minus UTEX_B_3156	exon	Contig_175 239132..239158 -
exon_16612_16	exon_16612_16	Tribonema minus UTEX_B_3156	exon	Contig_175 239320..239439 -
exon_16612_15	exon_16612_15	Tribonema minus UTEX_B_3156	exon	Contig_175 239589..239643 -
exon_16612_14	exon_16612_14	Tribonema minus UTEX_B_3156	exon	Contig_175 239894..239961 -
exon_16612_13	exon_16612_13	Tribonema minus UTEX_B_3156	exon	Contig_175 240265..240324 -
exon_16612_12	exon_16612_12	Tribonema minus UTEX_B_3156	exon	Contig_175 240658..240816 -
exon_16612_11	exon_16612_11	Tribonema minus UTEX_B_3156	exon	Contig_175 242312..242332 -
exon_16612_10	exon_16612_10	Tribonema minus UTEX_B_3156	exon	Contig_175 242491..242592 -
exon_16612_9	exon_16612_9	Tribonema minus UTEX_B_3156	exon	Contig_175 243509..243862 -
exon_16612_8	exon_16612_8	Tribonema minus UTEX_B_3156	exon	Contig_175 244572..244616 -
exon_16612_7	exon_16612_7	Tribonema minus UTEX_B_3156	exon	Contig_175 244693..244734 -
exon_16612_6	exon_16612_6	Tribonema minus UTEX_B_3156	exon	Contig_175 244844..244906 -
exon_16612_5	exon_16612_5	Tribonema minus UTEX_B_3156	exon	Contig_175 244970..245059 -
exon_16612_4	exon_16612_4	Tribonema minus UTEX_B_3156	exon	Contig_175 245174..245385 -
exon_16612_3	exon_16612_3	Tribonema minus UTEX_B_3156	exon	Contig_175 246114..246233 -
exon_16612_2	exon_16612_2	Tribonema minus UTEX_B_3156	exon	Contig_175 246832..246954 -
exon_16612_1	exon_16612_1	Tribonema minus UTEX_B_3156	exon	Contig_175 247046..247086 -

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_16612	UTR3_16612	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_175 237448..237644 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_16612	CDS_16612	Tribonema minus UTEX_B_3156	CDS	Contig_175 246832..246904 -

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_16612	UTR5_16612	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_175 247046..247086 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353644	Trimin1\|353644\|estExt_Genemark1.C_Ctg_1750027	Tribonema minus UTEX_B_3156	polypeptide	Contig_175 237645..246904 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_175:237448..247086-
coding sequence from alignment at Contig_175:237448..247086-

spliced messenger RNA

>mRNA_16612 ID=mRNA_16612|Name=jgi.p|Trimin1|353644|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2151bp|location=Sequence derived from alignment at Contig_175:237448..247086- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
AAAAAATCAAAAGAAAGAGAGAGCCCAGCTGTGCGAACCAGGTCAGCATC
ATCCACAAGCCGCAGAGGACAATCACAAAGGAGCGCTCAATATGCGTGGC
CAGCTGCAGACGGATGTGCAGAGAGCGGAGGGACTTCTGATGACCAAAGT
CATCGACGTGAATGCGGCGCTAGCCCCTAAGTCGCTGACATTGGGCCCCA
AGTCGCCGAAGCGCTCCGCCAAGGGGGGGAAGCACAAGAACAAGGGGAGC
AAGGGGAAGCACACCGTCATGACGACCCACCAGGGGGGCCCCGCGCTGGA
GACCCACGAGGAAGCGCCGAGCACGTTCGTGCGCGTGACGGTCAAGGGCG
AGGCGCACTGCACGGCGACTATTGCGGCGACGACGGCGCCGCGCTGGCAC
GCGAGCTTTGCCTTCGACGTCGACGCGGAGGAGAGCGATAAGATCGTGTA
CGAGGTCGTGAGCAAGGCCGGCGGCGCCGAGGAGGTCGTCGGGATGAGAC
TCACCGGCGTTGATGTGGAGGAGGGCCACGAGATTGTGTACAAGGTCGTG
AGCAAGGCCGGCGGCGCCGCGGAGGTCGTCGGGGTGAACGGCGACATAGT
GTGGGAGGTCATGAGCAAGGCCGGCGGCGCCGCGGAGGTCGGCGGCGTGG
TCGTGAGCAACGCCGGCGGCGTCTTGGAGGTCGTCGGCGTGGAGGTCGTG
AGCGAGGCCGGCGGCGCCACTGAGGTCATCGGAGTGGTCACCATCCCCTT
CGGCAAGATTTGGGACGGCGCCGTCCCCCTGGGCGCCCCCCACGCGCTCC
TCCCCCCCGGCGCCGCCGCCGCCGACCCCCTCGCCTCCGTGGGCACCCTC
TACTTTGACTGCGCGTGGGCCGAGGCGCCGACAGCGCCGCCGCTCGTCGC
GCAGCCCGCTGCCGTCGCGAAGAGCGCTGCTGCGGCGACGACGACGGCGG
CAGCGGCGGCAGCGGCGCACCTGCCGCCGCCGGAGTTCGGCGCCGGCGCG
GGCGACCTGATCGACTGGGGTGCCGCGAAACTGGCGGGGCCGCGGCCGTC
GGTGCTGCGCGTGGAGTCGTACTACGCCGCCGCGAAGATGGTATACGGCA
CCGTCGCGCACCTGCCGCTCGTCAAGATGGTCTCGCCCATCTGGGAGGGC
GTGCTGGAGAGCATTCTGCAGAGGACGCCGCTGAAGCCTGAGAGGACGCC
GCTCAAGGCAAAGCACGGCGCACCCGAAGAGGGCGCGGAAGGCCACGGCA
CGCGCGTCGTCGACAGCATTGACAGGCAGATCGAGGGGGCGCTCAACGAC
GTCGACGAGCTCGTGGACAGGAAGAAGGACGAGGCGCTGAGCAGCATATG
CAACGCAAAGAACGTCATTAAGCTCGTGGACAAGAAGGATGAGACGCCGA
CCTCGCTGTGCAACGCCAAGAACGTGATCAAGGAAGGCAGGAAGGTGGGT
GATGCTCAGAGCACCGTGTGCCATGCTAACGACGCGCTCAAGGCGGAAAC
GCTGCGCAAGGTGGCCCTCACCTCCGCCGTGGACACAACGCACAGCGCTG
CGAGCGACATCAGGCCGGTGGAGACCATCATGACCACCGCCGGCGCGACG
CGCGGCGCCGTGGGTGACGCGGTGCACGGCGCGGTGGCAAGCGTGCAGGG
CTTCATTGGAGGCATCGTCGACAAGGGCTTCATCGGGGGCATCGTCGACA
AGGTGCATGGCACGGCGCACTCCGCGGCCGACGCGGTGCTGCACGCGGCG
AGCGACGCCACCGGCGCCGCGGCGCACGCCGCCGACACTGTGAAGCGCGC
CGCCGGCGCCGCGGCGGGCTCCGCCGTGGACACCGTGAGGAGCACTGTTG
CCCCATTCGCACGCGCCGCCGGCGCCGCGGTGGGCTCCGCCGTCGACACC
GTGAGGAGCACCGTCGGCGCTGGCGGTGCCAAGCCTGCAACCGCCTCTGC
TTAAGGCGCGCAGCGCCAGAGGTGCCGCTCAGCCGCAGCTACGGCTTGCG
CGTGCACGATTCGACGCAGATGAGGAGTGCTGATGTTGCGCCGAGGCACG
TGATTTGGGCCGCATTGACGCAAGCATCGCGCTGGGCGGCGCTGCGGCTG
CTTTTTGCGCGCAGCGTGCGCTGTGAGGCGCAGCTCAAGTGCACCTGCGC
G

protein sequence of jgi.p|Trimin1|353644

>Trimin1|353644|estExt_Genemark1.C_Ctg_1750027 ID=Trimin1|353644|estExt_Genemark1.C_Ctg_1750027|Name=jgi.p|Trimin1|353644|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=621bp
MRGQLQTDVQRAEGLLMTKVIDVNAALAPKSLTLGPKSPKRSAKGGKHKN
KGSKGKHTVMTTHQGGPALETHEEAPSTFVRVTVKGEAHCTATIAATTAP
RWHASFAFDVDAEESDKIVYEVVSKAGGAEEVVGMRLTGVDVEEGHEIVY
KVVSKAGGAAEVVGVNGDIVWEVMSKAGGAAEVGGVVVSNAGGVLEVVGV
EVVSEAGGATEVIGVVTIPFGKIWDGAVPLGAPHALLPPGAAAADPLASV
GTLYFDCAWAEAPTAPPLVAQPAAVAKSAAAATTTAAAAAAAHLPPPEFG
AGAGDLIDWGAAKLAGPRPSVLRVESYYAAAKMVYGTVAHLPLVKMVSPI
WEGVLESILQRTPLKPERTPLKAKHGAPEEGAEGHGTRVVDSIDRQIEGA
LNDVDELVDRKKDEALSSICNAKNVIKLVDKKDETPTSLCNAKNVIKEGR
KVGDAQSTVCHANDALKAETLRKVALTSAVDTTHSAASDIRPVETIMTTA
GATRGAVGDAVHGAVASVQGFIGGIVDKGFIGGIVDKVHGTAHSAADAVL
HAASDATGAAAHAADTVKRAAGAAAGSAVDTVRSTVAPFARAAGAAVGSA
VDTVRSTVGAGGAKPATASA*

mRNA from alignment at Contig_175:237448..247086-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_16612 ID=mRNA_16612|Name=jgi.p|Trimin1|353644|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=9639bp|location=Sequence derived from alignment at Contig_175:237448..247086- (Tribonema minus UTEX_B_3156 )
AAAAAATCAAAAGAAAGAGAGAGCCCAGCTGTGCGAACCAGGTGAGGCCC
GAGCATCCGACTGCATGCGACGCGCAAGACTTGCATCGATCTGCATGATG
GTCACCTGCCCTACCCCATGAACCCGCAGCAGGTCAGCATCATCCACAAG
CCGCAGAGGACAATCACAAAGGAGCGCTCAATATGCGTGGCCAGCTGCAG
ACGGATGTGCAGAGAGCGGAGGGACTTCTGATGACCAAAGTCATCGACGT
GAATGGTGAGTTGTCAGGCACGGATCATGTTCATGCCAAAGGGTCACTGG
TCGCTCAGAGAGTGAGGCAGCAGACCTCATGAAGACTCTTCTGAAGGATG
AAAGAGGCTCGATAGCTGGTTATAGGATCCAAAGCCACCACTTGGTGTCA
TCAGCCACTCAGCCATTGTTGCAGGATCTTGCTCAGAGCTGGCGGGTACT
GCTTGGATTCCTTCAGAACTCCAGCACAAAGAACATGGTTGTTGAAGCAC
ACCAGATTCTACGCTGATTGTTGAGCTTGCTGCACCTCAAACGCCCCATC
ATCTATGCTGGCATTTTAAGCGGGTCTGGATGAACCCTGATGCTTGAAAG
CAGCGCAGCGAAGGTTCAGCCTCCTGCGATGACAGTGCTCTGCAGCGGCA
CTAGCTCCCGTCACCAGCCAGTGGCGCAGTGTGCGTCGCAGCAAGAGGTG
CACCGCAAGCGGACAGCTGCCGCTTGACCCAGCGCTGAGCGCTGAGCGTC
CTCGTTGCCCCTTCTATGGCTGCGCAATCTTCATGAGGCCTGGCGGAAAG
AAAAACATTATCGGAGTTCCTTGCTGCGTGTGCTTGCTGTGCCGCGTGCG
CAGCGGCGCTAGCCCCTAAGTCGCTGACATTGGGCCCCAAGTCGCCGAAG
CGCTCCGCCAAGGGGGGGAAGCACAAGAACAAGGGGAGCAAGGGGAAGCA
CACCGTCATGACGACCCACCAGGGTGAGTGCACCAAGAATCAGATGCAGT
GTCCACTTTCAGAGTAACTAATGAGTATGAATTTGACAGCGCGTGGACCA
GTTCGGCGACCCTGAATTAATTCACGATTAGGCATTTGGCAGCGCATGTC
GCAAGGCTGTGTAAAGCGGAGGAGGCAGGGAAGGCGCAACGGAGTGCGTT
TGCGCACGCAGCGTGCACAGCCTTGAGGTTGCATGATGCCACCGCAAGGC
ATGGCACGCAAGGTAACTGACGCGTGGCTGGGGTCACAAGCTTTGAAGTC
GACTGGCACTTTTGTTTTTGCTGCGCCGACAGCAGACGATTCCGGCAGCA
TCTCTGGGTGGCAACGCTGTGTGCGGCGCGGCGGCGCTAGCAGTCTGCCG
CGACAACTGTGCGGGTGCTGCATCAGACGCGCGTCGATGACTTCAGACAA
ACTGGAAACATTGGCGGCGGGCTTGTTGCCAGATCGTCGCAGCCAAAGGA
AGCCCATGGCACAGCGGCCGACGTGGCTGTCACCTGCTTCAATCCGCCGG
CATGCGCTGAGTGTTGCGGAATGAATTTCGTCCGCGCACGCTATACGCAC
CTCGTGCGGTTCGTCACAACTGATGTAGTACAGCACACGAGCTGAGCGCG
CCGCGCACGTCAGTATCTTGAGGAAATACGCATTTTCGAGGTATGCACTT
CAATAACATACTTCAAGAATTAACTCCAACCACGCATTCATGCGCGCGCA
GGGGGCCCCGCGCTGGAGACCCACGAGGAAGCGCCGAGCACGTTCGTGCG
CGTGACGGTCAAGGGCGAGGCGCACTGCACGGCGACTATTGCGGCGACGA
CGGCGCCGCGCTGGCACGCGAGCTTTGCCTTCGACGTCGACGCGGAGGAG
AGCGATAAGATCGTGTACGAGGTCGTGAGCAAGGCCGGCGGCGCCGAGGA
GGTCGTCGGGATGGTGAGTCACACTTCCAACTTGGTTTTCAAAGACACTC
GACGGCGCCGCCACACCGACGGCGGCGCCGCAGAGGTCAGTGGAGTGGTG
AGTTGTACTTCAACTTGATGTGCGCAGAGACTCACCGGCGTTGATGTGGA
GGAGGGCCACGAGATTGTGTACAAGGTCGTGAGCAAGGCCGGCGGCGCCG
CGGAGGTCGTCGGGGTGGTGAGTTTTGTACTTCAACTTCAACTTAATGTT
GTGCAGAGACGCACTGTTGATGCAGAGCAGAACGGCGACATAGTGTGGGA
GGTCATGAGCAAGGCCGGCGGCGCCGCGGAGGTCGGCGGCGTGGTGAGTC
GTACTTTAACTTAATGTGTGCGGAGACATTGGTGTTAATGCGGAGTGTTA
ATGCGGAGGAGAGCAAAGAGATGGTGTATGAGGTCGTGAGCAAGGCCATG
AGGTCGTGAGCAACGCCGGCGGCGTCTTGGAGGTCGTCGGCGTGGTGAGT
CACACTTGAACTTGATTTGTGCAGAGGCATTTTTGGTGTTGATGCGTAGG
AGAGCGGCGAGATCGTGTAGGAGGTCGTGAGCGAGGCCGGCGGCGCCACT
GAGGTCATCGGAGTGGTGAGCCGTATTCAACACTGTGGAATTTTTTTCCT
TATTAATGAAATTTTAGTTTCAGTATATTGTTTTATGTTGTGACTATCTT
CAAGTTCGAAATCTACAATCTGAGTTCATTGTTCCTGCAGAGTAGCACAT
CGTCGTGGCTGGGGGTATCCAGCTCACATCGTTTGCACGTGTGTGTCGCC
CGCTGGCCGCTGCGGCGCGTGCTAGTGCGTGCTGCTCTGAAGGCTGCCTT
TGGTTCACAAACATCATGTGGGGCAGGGTTGTAGGGTTGAAGTTAGGGAT
AGGGCTAACCCTAACCCTAATCTGAAGCGGGTGCTGGTACTCGACACTAC
CAGTGAGTGGCATTGAGGCAGTTGCTCACCTTTTCGCAAACGCTGTGGAT
CCAGTCACTGACCGGAGCCGCTGTGCGCCCAGTGCTCTGCGTTGCCCACG
GTGGGCTCTAGAGCTGGCGCTCCTCCCAACCGCAAGGGGGGGAAGGGCGT
GGGCACCAGGCCTAAGATCACACATTTTCCACAACCAATGTGTCTGCCGC
TGTGCCTTCGCCGCTCTGTCACATCAGAGATGCCTGCAGCTGCCACCAGC
GCCACGAGGCCCCCCCCCCCCCCCCCCCCCCCCCTAGTCGCAGCTGCTCC
CCTCTGATCCGATGCTCCACGCCATTCCCCTCCCCCCCCCCCCCACACCC
CCATCCCCCGCCGCTGCCCCCCAGGTCACCATCCCCTTCGGCAAGATTTG
GGACGGCGCCGTCCCCCTGGGCGCCCCCCACGCGCTCCTCCCCCCCGGCG
CCGCCGCCGCCGACCCCCTCGCCTCCGTGGGCACCCTCTACTTTGACTGC
GCGTGGGCCGAGGCGCCGACAGCGCCGCCGCTCGTCGCGCAGCCCGCTGC
CGTCGCGAAGAGCGCTGCTGCGGCGACGACGACGGCGGCAGCGGCGGCAG
CGGCGCACCTGCCGCCGCCGGAGTTCGGCGCCGGCGCGGGCGACCTGATC
GACTGGGGTGCCGCGAAACTGGCGGGGCCGCGGCCGTCGGTGCTGCGCGT
GGAGTCGTACTACGCCGCCGCGAAGATGGTAAGAACCGTCACGGCTGGGT
GCCGTGCGTCAAGTGATTGCTTTTTACTGCATTCAGCGTGTGGTACTCAT
CGCACGGGCTGCAGCGAGTTTGCGCTGCGCTGGCGTGGGAACGGGGCGGC
GGCCGTCGGTGCTGCGCGTGGAGTCGTACTACGCCGCCGCGAAAATGGCA
AGAACTACTAAGAAGTCACGGCAGGTTGCCGGGCGTGACCATTCAGGGCA
CGGACCAGTTTCTATCGCGATGGCCTGCCCGCGTGCCAGTATATACGATG
CGTTTTGCACATGGAGGTGCTTCGTCGCTGTGTCGGTGCTGCGCGTGGAG
TCGTACTACGCCGCCGCGACAATGGTGTGAACCGTCACGATGGTGGCTTG
CCTGACGTTAACTGTTTCACTGTTTACTGCATTGATTGTGTTGTGATTCA
TGGTGCTGTCCGTTGCGACAGGGTGCAGGGCGTTACCGAGGTTCACCGTT
CACTGCATTCATTGTGTTGTACTCAACGCGCGGGGGCGCGGCGAGTGTGC
GCGCTGCGCTGGCGTAGAAACGCGCGTGCGCGGCTTGCGCCGCAGTTTGA
TGCGCGCGCTACGCCCTGCGGAGGCGCGCTGCATGGCCAAGATGGACCAC
ACGATAGAGCACATCATGCTTTCAGAGACCGTTTTCTCGTGCGTCGCATG
ATAACCAACATGCAGGGGGCCAATGATTTTTCGCCTTTCACTCGAGCCAC
CAGAGGTTCTTTGTTCTTGTTCTGTCACTTGTCTTACACTCCCTGCGTGA
AGGCGTTTGTCATCATCCTTCCCATCGTTTCACTGCAAATTTCCAGCGTT
CATGTGCTTGTAAAGTGCAGGAAAGCGAGCAATCCCATCAGGCACTCTGC
AGTGTTCGCATACTAAAGTGATTGGATTCTGCCCCCGCTGGTAGGTATAC
GGCACCGTCGCGCACCTGCCGCTCGTCAAGATGGTCTCGCCCATCTGGGA
GGGCGTGCTGGAGAGCATTCTGCAGAGGACGCCGCTGAAGCCTGAGGTGA
GCGCTGCTGCCAGTAGACGTCGGTGACGCTCCTCAGTTGAAGTTGATCAG
ACGTCGCATTTGTGTGGACGGTGGTGTTGGCGTCCCAGCGTTGGGAGTGA
GCTCCTGGCTCTAGTTGAACTCTTGAAGACGCCAGAACCGTCTTCATCTT
GCAGAGGACGCCGCTCAAGGCAAAGGTGAGCGCTGCTGCCAGTAGACGTC
GGGTGCGCTCCTCAGTTGTAGTTGATCAGACGTGGCATTTGTGTGGACGG
TGGTGCTGGCATCCTGGAGTTGAAGTGTAGTCAAAGTTGAAGACGCCAGA
ACCGCCACTTCATCCTGCAGAGGACACCACTCAAGCTTGATTTGAGCGCT
GCTGCCAGTGGACGTCGCCAATGACGCTCCTCTGTTGCAGCTGATCAGGC
GTCGCATTGCTGTGGGCAGCGACGTTGCCATCCCTCAAATGGGGGGTTTG
CTGCTGACTTTGAAGTTGTGAGATCTCCTGACTTGAAGTTAAAGGCACGA
CGTCCCGCTCGCCGCCGGTACGCGCGCTGTACAGCAGACGGCGGCGGCGG
CCCGCGGCCGAAAAGACACTACTGTAGAGTGTCCTCCGCAGGCGCGCCAT
GCCATGCACTTCGCTTTTGCGGTCGCGAAACGCGATGGGGGTCACAATGT
CCGGCACTAGCACACTTAACGCTGATATTTGAGGCGTGGACTAGTCGTCT
GCGCGTGAGCAGGCGTCGGTAGATCACCAGCGTGGGAGAAGCAGCACATG
GAATCTGGCGGTGGCCGCTGCATAATCTGAGCGCTGCTGCAAGTACGCGC
TGAGTTAGAGCGTGCGTGCCGACAGTCGCTGCAGTGCCCCAGCCAGCCCC
CCGCTCTTTGGTTTGCCTTGATGAATCACGCTTCAATTCATGTGATGCTT
CACCCTCTCTCTTCCCCGTAACGCGGGCGCCCGCTGCGGGCTGCGCCGAT
AGTTCATCTCTTGTGCTTCTATCATGCCGCTTGCCATCCCTTCCGCTGCC
GCAGTCGACATTGGGACCGTTAAGTAGTTCATCGTTTGAATCACGACCTG
TTACCATCCGTCGCGCCGCTGACGACGGCGGCTGCAGCACCACAGCGACG
CCGCCTCTGCACTGCCCCAGTTTGCCTCATGATGCGTTTTCTCTTCTTGA
CCCCCGCCATAGCGGCCGCCGCAGCACGGCGCGTCTGAGGAACGGTACAC
GTGCCATGATGAAAGTGAAGTTTTGAGGATTGCACGAGTGAGAAAGTTGA
AGTTGTGAGACGCGCACGTCGAGCAGAGGCGCCGAGCGTCATGGCTGCAC
ACGCGTCGTCCACAGCATCGCGGCACCAAGATGCGCGCAGGAGGGGCATC
GAGGGCGCCTGATGTGTGTCAACGATCACAAACCCTAGATCCTAACCCTA
ACCTGTTTTTCCATGTTTTCTGCTCCTGCTGGTGCCGCAGCACGGCGCAC
CGGAGGAGGGCCCGGAAGGTCACTGCCCCTTGCCCTAACCCTATGTGCGT
CAATGGTTAATAACCCTCACTTTAACCCTTTTTTCTGTGTTTCCTGCTCC
CACCGCAGCACGGCGCATCGGAGGAGGGCGCGGAAGGCCACTAAATCCTG
ACCCTAACCCTATGTGCATCAATAATCAATAACCCTGACCCGAACCCTAA
CCCTTTTCTCTGTGTTTCAGCACGGCGCACCCGAAGAGGGCGCGGAAGGC
CACGGCACGCGCGTCGTCGACAGCATTGACAGGCAGATCGAGGGGGCGCT
CAACGACGTCGACGAGCTCGTGGACAGGAAGAAGGACGAGGCGCTGAGCA
GCATATGCAACGCAAAGAACGTCATTAAGGTGCGCTTTTGACTGTGTGCT
CTCCGCGCAGTGCGGTTGGCGCGCGCTTGAACCGTCGTGGGCAGGACGAA
GGTCAGGGCGTTGAGGACGATGTGCAACGCCAAGGATGTGATCACGGTGC
GCTCGCGCTGTGGTTGTGAGGGCTCTAGGGTTAGGGGTAGGGTTAGGCTT
TAACCTGCAACGCGCAGGCCGTGGTGTCGTCGAGGCCTGGGACAGGCAGT
AGGAGAGGCGCTCGGCGTCCCAGGCAACGCCAACTATGTGTTGTTGAGTT
GTGTGTCATTAGGGGTGTTCTTGATCTGAGTCTTACACGCCCTTGATCCG
AGGCGTGCTGAGCTCGTGGACAAGAAGGATGAGACGCCGACCTCGCTGTG
CAACGCCAAGAACGTGATCAAGGTGCGTCTCGACTGTGTGCTCTCCGCAC
GGCACGTACAGTGCGCGCCAGAGCTGTGATCGGAGTCATGGGAAGGACGC
AGGGTGCGGCTCTCAGCGCGCCGCGCAACATCAAGCTCGTGCTTGAGGCG
TGCTTCGCCTGCGCAGCGCTCTGCTAACCCTAACCTTAACCCTAACCCTA
AGACAACGCCGATGGTACACTCGAGGTGCGCTGGCCCTGTGCTAAAGAAG
GGCGCGGCGCTGAGCACTGTGATGACAACTGTGCGGCTGTCGCGGCCATC
GCGCTGCGCTCGGGGCAGTGAGCAGGAAGGCAGGAAGGTGGGTGATGCTC
AGAGCACCGTGTGCCATGCTAACGACGCGCTCAAGGCGGAAACGTGTGCG
CCCTTTGCTCAAGCTGTCGGAAGAGGGGCACTAATCCTGGCAGCATGTCA
ACGACAAGAATGAAATATTTGGAAGTAATGCATGTACTGAGGTGCGCGCT
GAATTGAATGCGCTGTCCTCTGCGGGATCGCTCCAGCGCGCGCGACGTCT
GTCGACAAGGCCGAAGAAGTCAACGGGGTTGGAATCGTACGGATCGCACC
CAGGACACGTCAAGCTGTGAGCTGCCCCGCTGGCGCTGTGCAGGCTGCGC
AAGGTGGCCCTCACCTCCGCCGTGGACACAACGCACAGCGCTGCGAGCGT
TCCATGCGCACGACCGTCTCAGGCACACACGCTGTTTCCCTGTACCGGCG
TCTGTGTGCCGCTGCGCTGCGCCGCTATCTCCTGCGATGCCAGCAGTTAA
CATTGCTGAAGTCCTCAATTTTCCTCGCACCGCCGCCTCGTGCGCAGGAC
ATCAGGCCGGTGGAGACCATCATGACCACCGCCGGCGCGACGCGCGGCGC
CGTGGGTGACGCGGTGCACGGCGCGGTGGCAAGCGTGCAGGGCTTCATTG
GAGGCATCGTCGACAAGGTGCGCGCACGAGCGCTGCTGCAGCCGCACTCC
GCACTGTGCACTGTGTACTCCAGTGTACTCCAGTGTACTGTGAAGTCCAA
CGCACTGTGTACCACAGCGCACTGTGCGACGGGCGCGCCGTGGGTGACGC
GGTTCATGGCACGGTGGCGAGCGTGCAGGGCTTCATCGGGGGCATCGTCG
ACAAGGTGCGCACACGAGCGCTGCTGCAGCCGCACTCCGCGCTGTGTACT
TCTCGTTCGCTGTCGCTTAAAGCATGAGGGAGCACAATCAATTGACGTCA
AGCTGGCGACCCGAGCCAATGCCTCATCACAGATGTTTTCAATGTTGATT
GCTGCCGAACGCGATAAGGTGCACGGCACGGCGCACTCTGCGGCCGACGC
GGTGCTGCACGCGGCGAGCGACGCCACTAGTGCCGCAGCGTTGCTGCCTC
TGTCTGGTACTCCAACCATGATTGCACAGCCATACTTTGCACGATGTCAA
GCCAGGAGGGACTGCACTGTGACAAGCTAACGACCGCCTGCCGATTGCTG
CCGAACGCGATTAGGTGCATGGCACGGCGCACTCCGCGGCCGACGCGGTG
CTGCACGCGGCGAGCGACGCCACCGGCGCCGCGGCGCACGCCGCCGACAC
TGTGAAGCGCGCCGCCGGCGCCGCGGCGGGCTCCGCCGTGGACACCGTGA
GGAGCACTGTTGGTGAGTGCAGTTGAAGTACGCAGCTGTATGTTGGAGGT
CATTGGGTGTAAAATATGTGTGGTATACTTGCAGTATACATTATGAGCAG
CCCCATTCGCACGCGCCGCCGGCGCCGCGGTGGGCTCCGCCGTCGACACC
GTGAGGAGCACCGTCGGCGCTGGCGGTGAGTGCAGTTGAAGTACACAGCT
GTACGTTGGCGGCCGCAGTCTGGTCGAGTGTACAAGATGCGGAGGTGCTC
AGCACAAGTTTTTGTTTGTGCTGTGAAAGCAATCATGACGGAACAACCGA
CCGCCCCCTTTACAAATACATGGAGGTACGTACCTCCATGTATAATCGAC
CCCATTCGTCATGTGCGCCGCCGGCGCCGTTGTGGGCGCCGCCGTCGACA
CCGTGAGGAGCACTGTTGGCGCTGGGGGTGAGTGCAGCTGCAGTTCCCAG
GTTCACGTGTGCGGGTGCGGTCTGGTAGAGTGTACAAGATGTCGAGGTGC
TCAGCACAAAATTATTTGTGCCGAGAAGCACTGGCCGCAAAGTGCTTGAT
ACTGGAGTGCGGTTCGGACGAGTGCACGTGATGGCCCAGCGCTCGGCGCA
TGCGTTGTGCTGCTTAAGCAATCATGATAAAACAAACGAACTGCCCCTGT
CAGCAGTCATGGTAAAAATAACCCAACTGCCCCTGTCCAAAGTATACTTG
AAGTATATACCATCGACCCGCGCGCCGCTGGCGCCGCCGTGGGCTCCGCC
GTTGATTCGGTGAGGAGCATTGTCGGTGCTGGCGGTGACCAATACCTTGT
CACGCGCGCTGCAGGGGAGGGGTCGACGTCTTGTCTCATCATGAAGGGAC
ACAAAGCTCGATGACTATGCCTGTACCTATACACCCGCGCTTGACGCCAA
CGCCGCGCGACGGCGCATTTGCAACACGGCTCAATACACGCCCCTGTGCC
ATCCTCGCCGCAGGTGCCAAGCCTGCAACCGCCTCTGCTTAAGGCGCGCA
GCGCCAGAGGTGCCGCTCAGCCGCAGCTACGGCTTGCGCGTGCACGATTC
GACGCAGATGAGGAGTGCTGATGTTGCGCCGAGGCACGTGATTTGGGCCG
CATTGACGCAAGCATCGCGCTGGGCGGCGCTGCGGCTGCTTTTTGCGCGC
AGCGTGCGCTGTGAGGCGCAGCTCAAGTGCACCTGCGCG

Coding sequence (CDS) from alignment at Contig_175:237448..247086-

>mRNA_16612 ID=mRNA_16612|Name=jgi.p|Trimin1|353644|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1863bp|location=Sequence derived from alignment at Contig_175:237448..247086- (Tribonema minus UTEX_B_3156 )
ATGCGTGGCCAGCTGCAGACGGATGTGCAGAGAGCGGAGGGACTTCTGAT
GACCAAAGTCATCGACGTGAATGCGGCGCTAGCCCCTAAGTCGCTGACAT
TGGGCCCCAAGTCGCCGAAGCGCTCCGCCAAGGGGGGGAAGCACAAGAAC
AAGGGGAGCAAGGGGAAGCACACCGTCATGACGACCCACCAGGGGGGCCC
CGCGCTGGAGACCCACGAGGAAGCGCCGAGCACGTTCGTGCGCGTGACGG
TCAAGGGCGAGGCGCACTGCACGGCGACTATTGCGGCGACGACGGCGCCG
CGCTGGCACGCGAGCTTTGCCTTCGACGTCGACGCGGAGGAGAGCGATAA
GATCGTGTACGAGGTCGTGAGCAAGGCCGGCGGCGCCGAGGAGGTCGTCG
GGATGAGACTCACCGGCGTTGATGTGGAGGAGGGCCACGAGATTGTGTAC
AAGGTCGTGAGCAAGGCCGGCGGCGCCGCGGAGGTCGTCGGGGTGAACGG
CGACATAGTGTGGGAGGTCATGAGCAAGGCCGGCGGCGCCGCGGAGGTCG
GCGGCGTGGTCGTGAGCAACGCCGGCGGCGTCTTGGAGGTCGTCGGCGTG
GAGGTCGTGAGCGAGGCCGGCGGCGCCACTGAGGTCATCGGAGTGGTCAC
CATCCCCTTCGGCAAGATTTGGGACGGCGCCGTCCCCCTGGGCGCCCCCC
ACGCGCTCCTCCCCCCCGGCGCCGCCGCCGCCGACCCCCTCGCCTCCGTG
GGCACCCTCTACTTTGACTGCGCGTGGGCCGAGGCGCCGACAGCGCCGCC
GCTCGTCGCGCAGCCCGCTGCCGTCGCGAAGAGCGCTGCTGCGGCGACGA
CGACGGCGGCAGCGGCGGCAGCGGCGCACCTGCCGCCGCCGGAGTTCGGC
GCCGGCGCGGGCGACCTGATCGACTGGGGTGCCGCGAAACTGGCGGGGCC
GCGGCCGTCGGTGCTGCGCGTGGAGTCGTACTACGCCGCCGCGAAGATGG
TATACGGCACCGTCGCGCACCTGCCGCTCGTCAAGATGGTCTCGCCCATC
TGGGAGGGCGTGCTGGAGAGCATTCTGCAGAGGACGCCGCTGAAGCCTGA
GAGGACGCCGCTCAAGGCAAAGCACGGCGCACCCGAAGAGGGCGCGGAAG
GCCACGGCACGCGCGTCGTCGACAGCATTGACAGGCAGATCGAGGGGGCG
CTCAACGACGTCGACGAGCTCGTGGACAGGAAGAAGGACGAGGCGCTGAG
CAGCATATGCAACGCAAAGAACGTCATTAAGCTCGTGGACAAGAAGGATG
AGACGCCGACCTCGCTGTGCAACGCCAAGAACGTGATCAAGGAAGGCAGG
AAGGTGGGTGATGCTCAGAGCACCGTGTGCCATGCTAACGACGCGCTCAA
GGCGGAAACGCTGCGCAAGGTGGCCCTCACCTCCGCCGTGGACACAACGC
ACAGCGCTGCGAGCGACATCAGGCCGGTGGAGACCATCATGACCACCGCC
GGCGCGACGCGCGGCGCCGTGGGTGACGCGGTGCACGGCGCGGTGGCAAG
CGTGCAGGGCTTCATTGGAGGCATCGTCGACAAGGGCTTCATCGGGGGCA
TCGTCGACAAGGTGCATGGCACGGCGCACTCCGCGGCCGACGCGGTGCTG
CACGCGGCGAGCGACGCCACCGGCGCCGCGGCGCACGCCGCCGACACTGT
GAAGCGCGCCGCCGGCGCCGCGGCGGGCTCCGCCGTGGACACCGTGAGGA
GCACTGTTGCCCCATTCGCACGCGCCGCCGGCGCCGCGGTGGGCTCCGCC
GTCGACACCGTGAGGAGCACCGTCGGCGCTGGCGGTGCCAAGCCTGCAAC
CGCCTCTGCTTAA