mRNA_1640 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|136739
Unique Name	mRNA_1640
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|136739 vs. uniprot
Match: A0A835YWD1_9STRA (Putative death-associated protein kinase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWD1_9STRA)

HSP 1 Score: 342 bits (877), Expect = 5.780e-119
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 1

Query:    1 GKGASSTVWRCARRADGDALAAKVMDLRPLKFRERFSMERLRREVDIMRQLRHPNIVRLEDVFETDDQLVLVLEYARGVELFDAILTRGRYTEDDARPIFLQVARALYYLHSLQIVHRDVKPENIMVSETADGLYPEAKLLDFGLSKMVGEDMGSAARTFVGTPCYLAPEVSS 519
            GKGASSTVWRCARRADGDALAAKVMDLRPLKFRERFSMERLRREVDIMRQLRHPNIVRLEDVFETDDQLVLVLEYARGVELFDAILTRGRYTEDDARPIFLQVARALYYLHSLQIVHRDVKPENIMVSETADGLYPEAKLLDFGLSKMVGEDMGSAARTFVGTPCYLAPEVSS
Sbjct:    1 GKGASSTVWRCARRADGDALAAKVMDLRPLKFRERFSMERLRREVDIMRQLRHPNIVRLEDVFETDDQLVLVLEYARGVELFDAILTRGRYTEDDARPIFLQVARALYYLHSLQIVHRDVKPENIMVSETADGLYPEAKLLDFGLSKMVGEDMGSAARTFVGTPCYLAPEVSS 173

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BLAST of jgi.p|Trimin1|136739 vs. uniprot
Match: A0A835YLX8_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLX8_9STRA)

HSP 1 Score: 280 bits (716), Expect = 6.590e-93
Identity = 138/173 (79.77%), Postives = 158/173 (91.33%), Query Frame = 1

Query:    1 GKGASSTVWRCARRADGDALAAKVMDLRPLKFRERFSMERLRREVDIMRQLRHPNIVRLEDVFETDDQLVLVLEYARGVELFDAILTRGRYTEDDARPIFLQVARALYYLHSLQIVHRDVKPENIMVSE--TADGLYPEAKLLDFGLSKMVGEDMGSAARTFVGTPCYLAPEV 513
            GKGASSTVWRC  R  G A AAKV+DLRPLKFRERF++ERLRREV+IMR+L HP+IV +E+ FET+DQL+LVLE+A+GVELFDAIL R RY+EDDARP+FLQVARALYYLHS+ ++HRDVKPENIMV +  +ADGL+PEAKLLDFGLSKMVGEDMGSAARTFVGTPCYLAPEV
Sbjct:    1 GKGASSTVWRCVDRRSGVAYAAKVIDLRPLKFRERFNVERLRREVNIMRKLHHPSIVNMENAFETEDQLILVLEFAQGVELFDAILARKRYSEDDARPVFLQVARALYYLHSMNVLHRDVKPENIMVRDVVSADGLFPEAKLLDFGLSKMVGEDMGSAARTFVGTPCYLAPEV 173

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BLAST of jgi.p|Trimin1|136739 vs. uniprot
Match: W7TL39_9STRA (Protein serine threonine kinase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TL39_9STRA)

HSP 1 Score: 231 bits (589), Expect = 1.830e-73
Identity = 116/175 (66.29%), Postives = 139/175 (79.43%), Query Frame = 1

Query:    1 GKGASSTVWRCARRADGDALAAKVMDLRPLKFRERFSMERLRREVDIMRQLRHPNIVRLEDVFETDDQLVLVLEYARGVELFDAILTRGRYTEDDARPIFLQVARALYYLHSLQIVHRDVKPENIMVSE--TADGLYPEAKLLDFGLSKMVGEDMGSAARTFVGTPCYLAPEVSS 519
            G+GA S V RC  R  G+  A K+MDLRPL+ RE F   RLRREV+IM++L HP+I+RLE VFE    LVLVLEYARG ELFD+IL + RYTE++ARPIF+QVA AL YLH L IVHRDVKPEN+++ +  + +G YP AKLLDFGLSKM+G+D GSAARTFVGTPCYLAPEV +
Sbjct:   77 GRGAFSVVHRCTNRITGEDFAVKLMDLRPLQLRENFDQARLRREVEIMQRLEHPHIIRLEGVFEDASTLVLVLEYARGTELFDSILQKKRYTEEEARPIFVQVAHALAYLHRLHIVHRDVKPENVILLDALSPEGFYPFAKLLDFGLSKMIGQDDGSAARTFVGTPCYLAPEVEA 251

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BLAST of jgi.p|Trimin1|136739 vs. uniprot
Match: A0A4D9CU84_9STRA (Protein kinase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CU84_9STRA)

HSP 1 Score: 230 bits (587), Expect = 1.220e-69
Identity = 116/175 (66.29%), Postives = 138/175 (78.86%), Query Frame = 1

Query:    1 GKGASSTVWRCARRADGDALAAKVMDLRPLKFRERFSMERLRREVDIMRQLRHPNIVRLEDVFETDDQLVLVLEYARGVELFDAILTRGRYTEDDARPIFLQVARALYYLHSLQIVHRDVKPENIMVSE--TADGLYPEAKLLDFGLSKMVGEDMGSAARTFVGTPCYLAPEVSS 519
            G+GA S V RC  R  G+  A K+MDLRPL+ RE F   RLRREV+IM++L HP+I+RLE VFE    LVLVLEYARG ELFD+IL + RYTE+ ARPIF+QVA AL YLH L IVHRDVKPEN+++ +  + +G YP AKLLDFGLSKM+G+D GSAARTFVGTPCYLAPEV +
Sbjct:   77 GRGAFSVVHRCTNRVTGEDFAVKLMDLRPLQLRENFDQARLRREVEIMQRLEHPHIIRLEGVFEDASTLVLVLEYARGTELFDSILQKKRYTEETARPIFVQVAHALAYLHRLHIVHRDVKPENVILLDALSPEGFYPFAKLLDFGLSKMIGQDDGSAARTFVGTPCYLAPEVEA 251

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BLAST of jgi.p|Trimin1|136739 vs. uniprot
Match: D7G8N3_ECTSI (Calcium/ calmodulin-dependent protein kinase 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8N3_ECTSI)

HSP 1 Score: 220 bits (561), Expect = 1.730e-63
Identity = 117/192 (60.94%), Postives = 140/192 (72.92%), Query Frame = 1

Query:    1 GKGASSTVWRCA--------RRADGDAL----------AAKVMDLRPLKFRERFSMERLRREVDIMRQLRHPNIVRLEDVFETDDQLVLVLEYARGVELFDAILTRGRYTEDDARPIFLQVARALYYLHSLQIVHRDVKPENIMVSETA--DGLYPEAKLLDFGLSKMVGEDMG-SAARTFVGTPCYLAPEV 513
            G GAS TVW+C         +RA G             AAK++DLRP K RERFSM+RL REVDIMR+LRHPNI+ L +  +T +QLVL+LEYA GVELFDAIL++  ++E +ARP+F+QVARAL Y+HS  IVHRDVKPEN+M+ +    DGLYPEAKLLDFGLSK +  D G S ARTFVGTP YLAPEV
Sbjct:   47 GSGASGTVWKCRLAPGNGPPKRAGGPVAGEDPVPGRIYAAKIIDLRPFKLRERFSMQRLMREVDIMRRLRHPNIIHLVEALDTPEQLVLILEYAPGVELFDAILSKASFSESEARPVFVQVARALQYMHSKSIVHRDVKPENVMIIDRTAPDGLYPEAKLLDFGLSKAIDADTGGSVARTFVGTPSYLAPEV 238

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BLAST of jgi.p|Trimin1|136739 vs. uniprot
Match: A0A7S2WFE1_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WFE1_9STRA)

HSP 1 Score: 213 bits (541), Expect = 1.110e-61
Identity = 109/176 (61.93%), Postives = 131/176 (74.43%), Query Frame = 1

Query:    1 GKGASSTVWRCARRADGDALAAKVMDLRPLKFRERFSMERLRREVDIMRQLRHPNIVRLEDVFETDDQLVLVLEYARGVELFDAILTRGRYTEDDARPIFLQVARALYYLHSLQIVHRDVKPENIMVSETADGLYPEA---KLLDFGLSKMVGEDMGSAARTFVGTPCYLAPEVSS 519
            GKGA STV RC R   G+A A KV+DLRPL+ R+ F   RL REV IMR+L HPNIV+L DVFE  D L+LV+E   GVELFD+IL++ RYTED+ARP+F+Q+A AL YLH   IVHRD+KPENI++ E + G        KLLDFGLSK +  + GSAA+TFVGTPCYLAPEV S
Sbjct:   62 GKGAFSTVHRCVRHDTGEACAVKVIDLRPLRLRQHFDAHRLLREVTIMRRLDHPNIVKLYDVFEEPDSLLLVMELVPGVELFDSILSKSRYTEDEARPVFIQIASALKYLHDQNIVHRDIKPENIVLVEYSKGERKNGCTVKLLDFGLSKSLDSEFGSAAKTFVGTPCYLAPEVES 237

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BLAST of jgi.p|Trimin1|136739 vs. uniprot
Match: A0A7S3HNC2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HNC2_9STRA)

HSP 1 Score: 205 bits (521), Expect = 3.430e-58
Identity = 107/172 (62.21%), Postives = 130/172 (75.58%), Query Frame = 1

Query:    1 GKGASSTVWRCARRADGDALAAKVMDLRPLKFRERFSMERLRREVDIMRQLRHPNIVRLEDVFETDDQLVLVLEYARGVELFDAILTRGRYTEDDARPIFLQVARALYYLHSLQIVHRDVKPENIMVSETADGLYP-EAKLLDFGLSKMVGEDMGSAARTFVGTPCYLAPEV 513
            GKG  STV++   R  G   A K++DLRPL+ RERF+  RLRREVDIM++L HPNI++  DVFE +D L++V+EY  G ELFD IL R  + E+DARPIF+Q+ARALYYLHSL I+HRDVKPEN++VS   D      AKLLDFGLSK  G   GSAA+TFVGTPCY+APEV
Sbjct:   75 GKGGFSTVYQTKDRRTGKDYAVKIVDLRPLRLRERFNPLRLRREVDIMKRLHHPNIIQFVDVFEDNDNLMMVMEYCPGQELFDVILDRKFFHEEDARPIFVQIARALYYLHSLNILHRDVKPENVLVSSIPDAQGNIVAKLLDFGLSKNAGN--GSAAKTFVGTPCYVAPEV 244

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BLAST of jgi.p|Trimin1|136739 vs. uniprot
Match: A0A7S2XZA1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZA1_9STRA)

HSP 1 Score: 188 bits (478), Expect = 1.380e-57
Identity = 94/153 (61.44%), Postives = 119/153 (77.78%), Query Frame = 1

Query:   61 AAKVMDLRPLKFRERFSMERLRREVDIMRQLRHPNIVRLEDVFETDDQLVLVLEYARGVELFDAILTRGRYTEDDARPIFLQVARALYYLHSLQIVHRDVKPENIMVSETADGLYPEAKLLDFGLSKMVGEDMGSAARTFVGTPCYLAPEVSS 519
            A KVMD RP++F E F   R+ REVDIMRQL HP+I+RL +VF+TD +L+LVLEY  G+ELFDAIL RG + E +ARP+F+Q+ +A+ YLH  QI HRDVKPENI++ +  D +   AKLLDFGLSK +G +MGS  +TFVGTPCYLAPEV +
Sbjct:   13 AVKVMDTRPMRFNEGFDPSRMLREVDIMRQLDHPHIIRLHEVFQTDQELLLVLEYCPGLELFDAILQRGHFQEAEARPLFVQILQAIQYLHHKQIAHRDVKPENIILMQ-GDKV---AKLLDFGLSKRMGSEMGSLGKTFVGTPCYLAPEVEA 161

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BLAST of jgi.p|Trimin1|136739 vs. uniprot
Match: A0A7S2HPJ7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HPJ7_9STRA)

HSP 1 Score: 185 bits (470), Expect = 1.930e-56
Identity = 98/180 (54.44%), Postives = 129/180 (71.67%), Query Frame = 1

Query:    1 GKGASSTVWRCARRADGDALAAKVMDLRPLKFRERFSMERLRREVDIMRQLRHPNIVRLEDVFETDDQLVLVLEYARGVELFDAILTRGRYTEDDARPIFLQVARALYYLHSLQIVHRDVKPENIMVSET-----ADGLYPE----AKLLDFGLSKMVGEDMGSAARTFVGTPCYLAPEV 513
            G+GA S V RC+RR DG   A K++++RPL+ R++F M RL REVDIM ++ HP I++L +VFE  + ++LV+EYA GV+LFD+IL    Y+E  ARPIF Q+  AL YLHS  IVHRDVKPEN+++ ++     A    PE     KLLDFGLSK++ E  GS A++FVGTPCYLAPEV
Sbjct:   27 GQGAFSVVHRCSRRKDGLIFAVKLINIRPLRLRQQFDMSRLHREVDIMSRISHPGIIKLYEVFEDSETMMLVMEYADGVDLFDSILQEKSYSEITARPIFHQLTTALAYLHSNSIVHRDVKPENVLIVKSPHPPLAGSPVPEHTPVVKLLDFGLSKVIDEH-GSTAKSFVGTPCYLAPEV 205

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BLAST of jgi.p|Trimin1|136739 vs. uniprot
Match: A0A7S3XLU5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XLU5_HETAK)

HSP 1 Score: 185 bits (469), Expect = 7.080e-55
Identity = 100/176 (56.82%), Postives = 124/176 (70.45%), Query Frame = 1

Query:    1 GKGASSTVWRCARRADGDALAAKVMDLRPLKFRERFSMERLRREVDIMRQLRHPNIVRLEDVFETDDQLVLVLEYARGVELFDAILTR--GRYTEDDARPIFLQVARALYYLHSLQIVHRDVKPENIMVSETAD-GLYPEAKLLDFGLSKMVGEDMGSAARTFVGTPCYLAPEVSS 519
            G GASS V+ C    +G   A KVMD+RPLKFR  FS  ++  EV I+++ +HPNIV+L D     D+L L++EYA G ELFD IL +  G YTE+ ARPIF QVA+AL YLHS+ I+HRD+KPENI++ +  D    P AK+LDFGLSK V   M S A+TFVGTPCYLAPEV S
Sbjct:   45 GSGASSIVYTCTNMKNGVEYAVKVMDIRPLKFRADFSKSKMINEVHILQKAKHPNIVQLVDTILEGDRLYLIMEYAPGEELFDGILNQPEGHYTEEKARPIFHQVAQALVYLHSVGIIHRDIKPENILLLDNPDPNSTPVAKILDFGLSKNVESGM-SMAKTFVGTPCYLAPEVES 219

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|136739 vs. uniprot

BLAST of jgi.p|Trimin1|136739 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835YWD1_9STRA	5.780e-119	100.00	Putative death-associated protein kinase (Fragment...	[more]
A0A835YLX8_9STRA	6.590e-93	79.77	Kinase-like domain-containing protein (Fragment) n...	[more]
W7TL39_9STRA	1.830e-73	66.29	Protein serine threonine kinase n=1 Tax=Nannochlor...	[more]
A0A4D9CU84_9STRA	1.220e-69	66.29	Protein kinase domain-containing protein n=1 Tax=N...	[more]
D7G8N3_ECTSI	1.730e-63	60.94	Calcium/ calmodulin-dependent protein kinase 1 n=1...	[more]
A0A7S2WFE1_9STRA	1.110e-61	61.93	Hypothetical protein n=2 Tax=Rhizochromulina marin...	[more]
A0A7S3HNC2_9STRA	3.430e-58	62.21	Hypothetical protein n=1 Tax=Spumella elongata Tax...	[more]
A0A7S2XZA1_9STRA	1.380e-57	61.44	Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa...	[more]
A0A7S2HPJ7_9STRA	1.930e-56	54.44	Hypothetical protein (Fragment) n=1 Tax=Dictyocha ...	[more]
A0A7S3XLU5_HETAK	7.080e-55	56.82	Hypothetical protein (Fragment) n=1 Tax=Heterosigm...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_4	contig	Contig_4:987878..991833 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|136739\|gw1.4.156.1
BRITE	ko00000,ko00001,ko01000,ko01001
KEGG Pathway	ko04020,ko04024,ko04211,ko04371,ko04380,ko04720,ko04722,ko04725,ko04921,ko04925,ko05031,ko05034,map04020,map04024,map04211,map04371,map04380,map04720,map04722,map04725,map04921,map04925,map05031,map05034
KEGG ko	ko:K05869
EC	2.7.11.17
Description	protein serine/threonine kinase activity
COG category	T
Max annot lvl	2759\|Eukaryota
EggNOG OGs	KOG0032@1\|root,KOG0032@2759\|Eukaryota
Evalue	2.84e-64
Seed ortholog	2880.D7G8N3
Hectar predicted targeting category	other localisation
TranscriptId	137061
Track	FilteredModels1
ProteinId	136739

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|136739	gene_1640	Tribonema minus UTEX_B_3156	gene	Contig_4 987878..991833 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_1640_1	exon_1640_1	Tribonema minus UTEX_B_3156	exon	Contig_4 987878..988183 +
exon_1640_2	exon_1640_2	Tribonema minus UTEX_B_3156	exon	Contig_4 989821..989901 +
exon_1640_3	exon_1640_3	Tribonema minus UTEX_B_3156	exon	Contig_4 991702..991833 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_1640	CDS_1640	Tribonema minus UTEX_B_3156	CDS	Contig_4 987878..988183 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|136739	Trimin1\|136739\|gw1.4.156.1	Tribonema minus UTEX_B_3156	polypeptide	Contig_4 987878..991833 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_4:987878..991833+
coding sequence from alignment at Contig_4:987878..991833+

spliced messenger RNA

>mRNA_1640 ID=mRNA_1640|Name=jgi.p|Trimin1|136739|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=519bp|location=Sequence derived from alignment at Contig_4:987878..991833+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GGCAAGGGCGCGAGCTCCACCGTGTGGCGCTGCGCGCGGCGCGCGGACGG
CGACGCCCTCGCCGCCAAGGTCATGGACCTGCGCCCCCTCAAGTTCCGCG
AGCGCTTCAGCATGGAGCGCCTGCGGCGCGAGGTGGACATCATGCGCCAG
TTGCGCCACCCAAACATCGTGCGGCTCGAGGATGTCTTCGAGACGGACGA
CCAGCTTGTACTCGTGCTCGAGTACGCGCGCGGCGTCGAGCTGTTTGACG
CGATCCTCACGCGCGGGCGCTACACGGAGGACGATGCGCGGCCGATATTC
TTACAGGTGGCGCGTGCACTCTACTACCTCCACTCCCTGCAAATTGTACA
TCGAGACGTGAAGCCCGAGAACATAATGGTGAGTGAGACGGCTGACGGCC
TGTACCCAGAGGCGAAACTGCTGGACTTTGGCCTGAGCAAAATGGTCGGC
GAAGACATGGGCTCTGCGGCACGGACGTTTGTCGGCACGCCGTGTTATTT
GGCGCCCGAGGTCAGCAGC

protein sequence of jgi.p|Trimin1|136739

>Trimin1|136739|gw1.4.156.1 ID=Trimin1|136739|gw1.4.156.1|Name=jgi.p|Trimin1|136739|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=173bp
GKGASSTVWRCARRADGDALAAKVMDLRPLKFRERFSMERLRREVDIMRQ
LRHPNIVRLEDVFETDDQLVLVLEYARGVELFDAILTRGRYTEDDARPIF
LQVARALYYLHSLQIVHRDVKPENIMVSETADGLYPEAKLLDFGLSKMVG
EDMGSAARTFVGTPCYLAPEVSS

mRNA from alignment at Contig_4:987878..991833+

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_1640 ID=mRNA_1640|Name=jgi.p|Trimin1|136739|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3956bp|location=Sequence derived from alignment at Contig_4:987878..991833+ (Tribonema minus UTEX_B_3156 )
GGCAAGGGCGCGAGCTCCACCGTGTGGCGCTGCGCGCGGCGCGCGGACGG
CGACGCCCTCGCCGCCAAGGTCATGGACCTGCGCCCCCTCAAGTTCCGCG
AGCGCTTCAGCATGGAGCGCCTGCGGCGCGAGGTGGACATCATGCGCCAG
TTGCGCCACCCAAACATCGTGCGGCTCGAGGATGTCTTCGAGACGGACGA
CCAGCTTGTACTCGTGCTCGAGTACGCGCGCGGCGTCGAGCTGTTTGACG
CGATCCTCACGCGCGGGCGCTACACGGAGGACGATGCGCGGCCGATATTC
TTACAGGTACTTCAAAAGTGTGTGATAGGTATAGTGTATGGCTGTGAAAG
CGGGTGCGCGCTTGGCGTGCCTCGATATTCCTGCAGGTAGGGGCGTGCGC
GCAGTCGGCGCGTGTATTGGGGGCGTGCTGCGCCCCGCCGGCCGAGCGAT
TCCTACAGTTAAAAGTGACGCCTTAGTTGCGTGCGCCACGGCGCAGTGCA
GCATCTGGAAATTGTGTCGCGCTCGTCAGGAGACACTTGTGGCACGTGCG
CTGCACGTCGTGGTGCATCGGGGAGTGGCGACGCGCCTGTCTTGCAGCGC
GCTATAGCTGTTCTCAGCGCCTTCCGCGGTGCCCAGCACAGCAAGGCAAA
GTGACGCGCATCGTCGCGTAGGGCTTACAAATGATGAGAGGCACGCGCTG
GCACGGCTCATGCGGCGGCGGCCTCCCACGCGTCGTCATCACGCAGTCAG
CATGCGTGGCCTCAAGCGCCCCCCTGGACCTGTGCTGCACCCCCGGCATC
CGCAGCCGTGGGCTGCAGTTGATGTTGTCAGCAAAGGCCTCTTATGAGCC
AGATGCGGTGTGCAATTCCAAAGGCCAATGGCATAGGATTGGGAAACATT
TAGCTGTTTTAGAGGCAGTGCATGGTACAGAATTGCAGGAGGTTGGTATC
ATTTTTCAGGCTTCCGCCACAAATAAGCATTGTAACCACTTGAGCGTCAG
GCAGATTGTTGATCTCCACAGATATTCTGAAGGTGATGTTCTGCAGTGGC
AAAGAGATTACGGCACTAGCAGCGAACTGCTTTTTTGGCTCGTGGGCCAA
GGCTGATGTGACTTCGCGGCTTCATCGGATTGTGCGAGCGCTTCACTGAA
ACAGGGTTGCTTGAGTAGCGTCTGCACTGCAATGGCAAGTTCAAGTGCTA
AGGCGGCCGGTCAGCACTGGTACCACAAATCAAATTGAAAATGTAAACAG
TAGCAGCACCTGCTCCATATTCCTCAAGTCTGCCAGAGGCATGAATCAAC
CTTTCAGTATGCATGAACGTGCTGAGTCAGGCAGTACCTTCAGCAACTTT
TCAGAAATTGTTGAGCAGTCATAGCGTCCTGGATGTTTGGCGGTCTTACT
CATGATGCATGCAAAGGTCATGGTCCAAGCAAGGTCGTATAGTACATGGC
AAGAATCAGCAGGTGTTGTCCAGCCTTGCATGCTGTGTGCAGGCTCAAAG
CGTCCTCCGACCGTCAGTGCACTCTTGCCAAGCGATTGGTGCAATGGGAA
GGTTACTGAGTTGACACCAGTTTCAGCTGAATACCTTGCAAACTGAAATT
CAGTAAGCCTGACACCACTTTCATGTGAGGTGTGTGTGCTTCGACAGGCT
CTCATACTTGTCAATTTGCACAAGTACCACCGTCTCGCCAGAGCATTCAT
TGTGTTACGCTAGCTTGCTCCACCAGCCTATGCCCTCACAGAGCGGTTAA
GGTCTTGAAAGGAGTGCGTCACGGCAGCACAATCATCGTGTTCACTACAT
TCACCAGCTTGAATACTTTGCTTGCTAAGTAGGTACATTTGGATGCCAAC
TCATGTGCTGGACTGTGCCATGCTATAGGTGGTGCATGCGCTCTACTAGC
TCCACTCCCTTCACAAGATTCACTGCGACGTGCCATGCTGCAGGTGGCGC
GTGCACTCTACTACCTCCACTCCCTGCAAATTGTACATCGAGACGTGAAG
CCCGAGAACATAATGGTGAGTGAGGTTGCTGACACACCATATGATAAGAT
TTCCTATGGCATGGCAGAGATGGCGCGTACGCAGCGGTACAAGTACATGC
GTGAACTCGTGCGCGTAACCTGCCATGTAAGGCAGATAGCAAAAACCATA
CTGGTCCACAGCTCATAACTTGAGGCAACAAGTAAAACCTAGTGCCTACA
GAGGGCTGCTGCTGTGATGCGCTGTTGAAAATAAACAATAAGTTCAACTT
TTGTGCTTTTTCTGAAAATTTAGCCGAGGGACATACCTTGTTTAAACCAT
CGGACAGTCATATTGCAGTTAGACACGCTCTGCATGATTGTGGAAACCTG
TTGAAAACAGTGAGCAACTTTTCGGCTAGTAAAACTCAGCAATGACCAGT
TCCACAAACAATACGCATACCTGTTGGCACAGAGCACATACTCTTCCTGG
CAGCCGCTCTCACCAGTTCTCGCTGTTCTTGTACGCGAGCTTGCTAAAAA
ATCCATTCCTGCTATGTGGCGGTTATTGTATCATAATAGTGTATATACTT
CGAAGTATATAATTTGTGCTGCATGGCAATATATATCACCTAATTAGCAA
GAAAAAAAACCCATCTTTACCAGTGTCTACCTTCAAGAGTCCAGAACACC
CGTCACATTCTACTTATGCAAGCATGCCTGGCAATTAGCAGTGTCGCCAT
TGCTTCAGCTCTGGCGTCAAATGACGAAACATGCACTCATGTATGTATGC
ACCCACGTGTCCAGTGCGTGCGCTATGTGTTTCAGTTTTCGACAGCATGC
TAGGCTTGTATAAATACCAGACGCACGAACAGTGACACAGCACTTATCAT
GGCATAGCAGTTGCCAATGCAAAAGGCAACACTCAGGTGCATCACAGCCA
GTCACCAGCAGCAGTTCAAACACCAAGAGAATGCCAGCTCCATGCAATGC
AGTGCATGCGCAACATACTTCCTCTGTCTCAACAAGAATCTTCTTCAAGC
ACCAAGCGCAACCTCAAAACTAATGTGTGCAAATCGGCCAAGTAATATAC
CAAGTGGGGACCCATGATGATCGTTTTCAGTCGTTACGCTCATTATTTTC
CCAGAGCATCTGTGTCGCGTAAACACCGGATGTTCCGGTATTTTTTCCTC
ATTTGTCAAGTTTACCTTTGGAAGTTCTCTTTGGTCACCTGACCACCATA
TGCCCCACACCACCATAGCTGCAGAGGTCTCACACAGCTGATGATGATGG
TAGGTGTATATTCGCTACGCACACCATGTGTCGTGGAGGCATTGTCAAAC
GGCAAGCCAGGCTTGTGCTGGGAGATCACGATTAGAGCTGGTCGACGGGC
AAGTGCGCACAACTCACTGACCAGAACGTGCAGCTGTTGAGGTCTCAGGT
TGAACTTACCCTTCATAAGCACCGTTGTTCAGCGCAGGAACGTGCGGCAG
CAATTCCGCACTGCTTCACACACGGCGGAACTCGCCAAACAGCGGCGAAG
CAGGCATAGAATTCTGAGCGTACAACGGAATCACTACACCGGTATGTAGT
TATAACGTGATGAAACCTGCAACGTATAATATTACATTGCACGCGGTCGG
CAACCCTGGTGACTGTCCCATGGCTACACTCTGCTGGCACGGCTGTTGCA
TCCGCTGTCCGTGTGCGCATGACTCAGCTGCGCTTGCACCGCCGTGCACG
CGGTCACCGCTCGTGCGACAGTCGCGCCTCTGATGTCAGGGCACCTACCC
GCATCCACTAGTCTCATGTTGAGCACCTTGCGTTCATGCGCTTTTGATGA
CTGCTGCAGATCCGCGAGCGCAAGACGGCTGACGGCCTGTACCCAGAGGC
GAAACTGCTGGACTTTGGCCTGAGCAAAATGGTCGGCGAAGACATGGGCT
CTGCGGCACGGACGTTTGTCGGCACGCCGTGTTATTTGGCGCCCGAGGTC
AGCAGC

Coding sequence (CDS) from alignment at Contig_4:987878..991833+

>mRNA_1640 ID=mRNA_1640|Name=jgi.p|Trimin1|136739|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=519bp|location=Sequence derived from alignment at Contig_4:987878..991833+ (Tribonema minus UTEX_B_3156 )
GGCAAGGGCGCGAGCTCCACCGTGTGGCGCTGCGCGCGGCGCGCGGACGG
CGACGCCCTCGCCGCCAAGGTCATGGACCTGCGCCCCCTCAAGTTCCGCG
AGCGCTTCAGCATGGAGCGCCTGCGGCGCGAGGTGGACATCATGCGCCAG
TTGCGCCACCCAAACATCGTGCGGCTCGAGGATGTCTTCGAGACGGACGA
CCAGCTTGTACTCGTGCTCGAGTACGCGCGCGGCGTCGAGCTGTTTGACG
CGATCCTCACGCGCGGGCGCTACACGGAGGACGATGCGCGGCCGATATTC
TTACAGGTGGCGCGTGCACTCTACTACCTCCACTCCCTGCAAATTGTACA
TCGAGACGTGAAGCCCGAGAACATAATGGTGAGTGAGACGGCTGACGGCC
TGTACCCAGAGGCGAAACTGCTGGACTTTGGCCTGAGCAAAATGGTCGGC
GAAGACATGGGCTCTGCGGCACGGACGTTTGTCGGCACGCCGTGTTATTT
GGCGCCCGAGGTCAGCAGC