mRNA_16344 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|177677
Unique NamemRNA_16344
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|177677 vs. uniprot
Match: A0A835Z6R6_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6R6_9STRA)

HSP 1 Score: 756 bits (1953), Expect = 2.160e-275
Identity = 399/399 (100.00%), Postives = 399/399 (100.00%), Query Frame = 1
Query:    1 MDSSDIILEPWPSAAPQQCDSAAPQVVTGAAGPRCTLDQRYLIGRRLGKGAFSHVFECTSLSTHVKYAVKCVDTRRLRASDLASLKREICISSSLHHPGVCAVIELFEDGTGTSIVQELAAGGDLFDRIQQRTCYMEAPAAAVMARLLETVAHLHTAGIVHRDIKPENILCVSDSDDADVKLTDFGFAKRLSDLNTRDEACGTPQYVAPEIILGGAYGTKVDVWSLGVVAYALLGGYAPFYAKSAQCLFRAIVQADYHFHSKFWGHVSLEAKNFIRCMLQADPDQRWTAQQLLSHPWILSHVTRCAAAAAAAAPDGIAPLAEMPAAPLLDAXXXXXXXXXXXXXXXXXXXAQHSPLAPPRTLGVRGSQRRVANGLRWLQTVLHARAPRPPHGHHHAALR 1197
            MDSSDIILEPWPSAAPQQCDSAAPQVVTGAAGPRCTLDQRYLIGRRLGKGAFSHVFECTSLSTHVKYAVKCVDTRRLRASDLASLKREICISSSLHHPGVCAVIELFEDGTGTSIVQELAAGGDLFDRIQQRTCYMEAPAAAVMARLLETVAHLHTAGIVHRDIKPENILCVSDSDDADVKLTDFGFAKRLSDLNTRDEACGTPQYVAPEIILGGAYGTKVDVWSLGVVAYALLGGYAPFYAKSAQCLFRAIVQADYHFHSKFWGHVSLEAKNFIRCMLQADPDQRWTAQQLLSHPWILSHVTRCAAAAAAAAPDGIAPLAEMPAAPLLDAXXXXXXXXXXXXXXXXXXXAQHSPLAPPRTLGVRGSQRRVANGLRWLQTVLHARAPRPPHGHHHAALR
Sbjct:    1 MDSSDIILEPWPSAAPQQCDSAAPQVVTGAAGPRCTLDQRYLIGRRLGKGAFSHVFECTSLSTHVKYAVKCVDTRRLRASDLASLKREICISSSLHHPGVCAVIELFEDGTGTSIVQELAAGGDLFDRIQQRTCYMEAPAAAVMARLLETVAHLHTAGIVHRDIKPENILCVSDSDDADVKLTDFGFAKRLSDLNTRDEACGTPQYVAPEIILGGAYGTKVDVWSLGVVAYALLGGYAPFYAKSAQCLFRAIVQADYHFHSKFWGHVSLEAKNFIRCMLQADPDQRWTAQQLLSHPWILSHVTRCAAAAAAAAPDGIAPLAEMPAAPLLDAXXXXXXXXXXXXXXXXXXXAQHSPLAPPRTLGVRGSQRRVANGLRWLQTVLHARAPRPPHGHHHAALR 399          
BLAST of jgi.p|Trimin1|177677 vs. uniprot
Match: A0A835YJJ7_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJJ7_9STRA)

HSP 1 Score: 419 bits (1077), Expect = 2.810e-142
Identity = 202/268 (75.37%), Postives = 231/268 (86.19%), Query Frame = 1
Query:  103 CTLDQRYLIGRRLGKGAFSHVFECTSLSTHVKYAVKCVDTRRLRASDLASLKREICISSSLHHPGVCAVIELFEDGTG-TSIVQELAAGGDLFDRIQQRTCYMEAPAAAVMARLLETVAHLHTAGIVHRDIKPENILCVSDSDDADVKLTDFGFAKRLSDLNTRDEACGTPQYVAPEIILGGAYGTKVDVWSLGVVAYALLGGYAPFYAKSAQCLFRAIVQADYHFHSKFWGHVSLEAKNFIRCMLQADPDQRWTAQQLLSHPWILSH 903
            C+LD  Y +GRRLGKGAFS V+ECT   T  K+AVK VDTRRLR +D+ SL+RE+ ++S + HPGVCAV +LF D +G T++VQELA+ GDLFDRIQ+RTC+MEAPAAAVMARLLETVAH+HTAGIVHRDIKPENILCVSDSDD D+KLTDFGFAKR++DL T DEACGTPQYVAPEIILG  YGT+VDVWSLGVVAYALLGGYAPF+A S Q LFR+IV+ADY FH+KFW HVS+EAK+FIRCMLQ DP QRWTA  LL HPWI  H
Sbjct:   48 CSLDTHYALGRRLGKGAFSQVYECTCRDTGRKFAVKMVDTRRLRTADIVSLRREVALTSCIEHPGVCAVFDLFHDASGCTALVQELASAGDLFDRIQKRTCFMEAPAAAVMARLLETVAHVHTAGIVHRDIKPENILCVSDSDDTDLKLTDFGFAKRVADLTTCDEACGTPQYVAPEIILGQPYGTQVDVWSLGVVAYALLGGYAPFHAASVQTLFRSIVRADYCFHAKFWAHVSVEAKHFIRCMLQPDPAQRWTAAALLHHPWIAVH 315          
BLAST of jgi.p|Trimin1|177677 vs. uniprot
Match: A0A835ZHC9_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHC9_9STRA)

HSP 1 Score: 252 bits (643), Expect = 7.280e-78
Identity = 123/266 (46.24%), Postives = 173/266 (65.04%), Query Frame = 1
Query:   97 PRCTLDQRYLIGRRLGKGAFSHVFECTSLSTHVKYAVKCVDTRRLRASDLASLKREICISSSLHHPGVCAVIELFEDGTGTSIVQELAAGGDLFDRIQQRTCYMEAPAAAVMARLLETVAHLHTAGIVHRDIKPENILCVSDSDDADVKLTDFGFAKRLSDLNTRDEACGTPQYVAPEIILGGAYGTKVDVWSLGVVAYALLGGYAPFYAKSAQCLFRAIVQADYHFHSKFWGHVSLEAKNFIRCMLQADPDQRWTAQQLLSHPWI 894
            P     Q Y +G RLG GAFS V +C +     +YAVK VD   L   D  +L  EI I + + HP +  + E++ +     +V ELA GG+LF+RI +RTCY E  A  ++  L+ TV +LH + IVHRD+KPEN+L VS+ DD  +K+ DFGFA+ +S+L+  + ACGTPQYV+PEI+ G  Y   VD+WS+GV+A+ L+GGY PFY +    LFR I++ ++ F S FW H+S +AK+FI CML  +P++R  A QLL H W+
Sbjct:    3 PDDLFGQVYTLGPRLGAGAFSVVHKCLNKRDGREYAVKIVDKNALVREDRDALDNEIMIMNEISHPNIVQLAEVYRESNIYYLVMELARGGELFERIVERTCYTEDCARELLRLLIVTVQYLHRSSIVHRDLKPENLLLVSEGDDCFIKIADFGFAEHISELDCCNAACGTPQYVSPEILQGRHYTATVDIWSIGVIAFVLMGGYPPFYDREKTELFRKIIRGEFEFLSPFWDHISDDAKDFICCMLVVNPERRHNAAQLLEHRWV 268          
BLAST of jgi.p|Trimin1|177677 vs. uniprot
Match: A0A7S3XZF5_HETAK (Phosphorylase kinase n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZF5_HETAK)

HSP 1 Score: 244 bits (622), Expect = 9.970e-74
Identity = 127/281 (45.20%), Postives = 172/281 (61.21%), Query Frame = 1
Query:   58 DSAAPQVVTGAAGPRCTLDQRYLIGRRLGKGAFSHVFECTSLSTHVKYAVKCVDTRRLRASDLASLKREICISSSLHHPGVCAVIELFEDGTGTSIVQELAAGGDLFDRIQQRTCYMEAPAAAVMARLLETVAHLHTAGIVHRDIKPENILCVSDSDDADVKLTDFGFAKRLSDLNTRDEACGTPQYVAPEIILGGAYGTKVDVWSLGVVAYALLGGYAPFYAKSAQCLFRAIVQADYHFHSKFWGHVSLEAKNFIRCMLQADPDQRWTAQQLLSHPWILS 900
            DS     V    G   T    Y +G  LG GA+S V +CT  S   ++A K V+  +L+  D  +L+ EI I   L H  V  + ++F +G  T +V EL  GG+LFDRI Q+  Y E  A  ++A LL T+ +LHT  IVHRD+KPEN+L  S  DDA++K+ DFGFA+ +S++   +EACGTP YVAPEI+ G  Y  K D+WS GV+ Y LLGGY PFY +    LFR I +  Y FH+ +W HVS EA++ I  ML  +  QR +A +LL HPWI++
Sbjct:   13 DSKRSGKVKNHEGQERTFASCYQLGDELGTGAYSKVKKCTDKSNGKEWAAKIVNRAQLQPEDAQALEDEIKIMKELDHEHVIKLADVFNEGAQTILVLELVVGGELFDRIVQKEKYTEKEARDLVALLLRTLDYLHTHDIVHRDLKPENLLLTSREDDANIKIADFGFARHISEVREMEEACGTPGYVAPEILRGLKYSGKADLWSAGVITYILLGGYPPFYDEDQDQLFRKIRRGQYQFHAPYWDHVSEEARDLISQMLVVNHKQRQSAAELLRHPWIVA 293          
BLAST of jgi.p|Trimin1|177677 vs. uniprot
Match: W4FK15_9STRA (CAMK protein kinase n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FK15_9STRA)

HSP 1 Score: 243 bits (620), Expect = 2.160e-73
Identity = 125/285 (43.86%), Postives = 174/285 (61.05%), Query Frame = 1
Query:   46 PQQCDSAAPQVVTGAAGPRCTLDQRYLIGRRLGKGAFSHVFECTSLSTHVKYAVKCVDTRRLRASDLASLKREICISSSLHHPGVCAVIELFEDGTGTSIVQELAAGGDLFDRIQQRTCYMEAPAAAVMARLLETVAHLHTAGIVHRDIKPENILCVSDSDDADVKLTDFGFAKRLSDLNTRDEACGTPQYVAPEIILGGAYGTKVDVWSLGVVAYALLGGYAPFYAKSAQCLFRAIVQADYHFHSKFWGHVSLEAKNFIRCMLQADPDQRWTAQQLLSHPWILS 900
            P +   ++P+VVT    P  +  + Y +G+RLG GAF+ V E  +  T  K+AVKC+ T  L  +D+  L++EI I   L HP + ++ ++ E+   T +V E  AGG+LFDRI ++T Y E  A  ++  LL  + + H   +VHRD+KPEN+L  S  DDA +KL DFGFAK+ S ++    ACGTP YVAPEII G  YG  VD+WS+GV+ Y LL GY PF+  +   LF AI    Y F S +W  VS +AK FI CML+     R TA +LL H W+++
Sbjct:   55 PTEAAPSSPKVVTATTAPPLSFKETYTLGKRLGAGAFAVVREGVNKVTGTKFAVKCIKTSSLSPADVRGLRQEISILKQLSHPNIMSLHDVIEEPNVTYLVTEYIAGGELFDRIVEKTFYSENEARELVRILLGAIKYCHDHNVVHRDLKPENLLLTSADDDASIKLADFGFAKQQS-IDGLTTACGTPGYVAPEIIKGEPYGKSVDIWSVGVITYILLCGYPPFHDDNPTRLFAAIKTGSYKFESPYWDDVSADAKAFIGCMLKVHASSRATADELLKHAWMVN 338          
BLAST of jgi.p|Trimin1|177677 vs. uniprot
Match: A0A4D9CNB5_9STRA (Protein kinase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CNB5_9STRA)

HSP 1 Score: 242 bits (618), Expect = 2.410e-73
Identity = 119/265 (44.91%), Postives = 170/265 (64.15%), Query Frame = 1
Query:  106 TLDQRYLIGRRLGKGAFSHVFECTSLSTHVKYAVKCVDTRRLRASDLASLKREICISSSLHHPGVCAVIELFEDGTGTSIVQELAAGGDLFDRIQQRTCYMEAPAAAVMARLLETVAHLHTAGIVHRDIKPENILCVSDSDDADVKLTDFGFAKRLSDLNTRDEACGTPQYVAPEIILGGAYGTKVDVWSLGVVAYALLGGYAPFYAKSAQCLFRAIVQADYHFHSKFWGHVSLEAKNFIRCMLQADPDQRWTAQQLLSHPWILS 900
            + D+ Y +G+ LG GA++ V+ECT+++T  K AVK VD  +L   D  +LK+E+ I   + H  V  + + ++D     +V E+  GG+LFDRI ++  Y E  A  ++  L +T+ + H+  +VHRD+KPEN+L   + DDA++KL DFGFA+R+   N+    CGTP YVAPEI+ G  YG KVDVWS GV+ Y LLGGY PFY ++   +FR I + D+ FHS  W HVS EAK+ I+ +L  DPD+R  A   L H WIL+
Sbjct:   22 SFDKDYTLGKELGSGAYAVVYECTNMATGRKAAVKIVDRSKLSGEDDEALKQEVAILRDMKHGHVVQLFDFYKDRQKYYLVLEICLGGELFDRIVEKKSYNEKEARDLVRILFDTLRYCHSTKVVHRDLKPENLLLEDERDDANIKLADFGFAQRMLTPNSLTTQCGTPGYVAPEILKGIPYGEKVDVWSAGVITYILLGGYPPFYDENQGRMFRKIKRGDFKFHSPMWDHVSPEAKDLIKRLLVVDPDKRLDAAGALKHAWILT 286          
BLAST of jgi.p|Trimin1|177677 vs. uniprot
Match: A0A6G0WA61_9STRA (Phosphorylase kinase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WA61_9STRA)

HSP 1 Score: 241 bits (615), Expect = 6.400e-73
Identity = 123/260 (47.31%), Postives = 171/260 (65.77%), Query Frame = 1
Query:  118 RYLIGRRLGKGAFSHVFECTSLSTHVKYAVKCVDTRRLRASDLASLKREICISSSLHHPGVCAVIELFEDGTGTSIVQELAAGGDLFDRIQQRTCYMEAPAAAVMARLLETVAHLHTAGIVHRDIKPENILCVSDSDDADVKLTDFGFAKRLSDLNTR-DEACGTPQYVAPEIILGGAYGTKVDVWSLGVVAYALLGGYAPFYAKSAQCLFRAIVQADYHFHSKFWGHVSLEAKNFIRCMLQADPDQRWTAQQLLSHPWI 894
            +Y +G+RLG G+F+ V +   L+T   +AVKC+DT  L ++D A+LK+EI I   LHHP + A+ E++ +   T +V EL  GG+LFDRI ++T Y E  A  V+  +L+ + + H  G+VHRD+KPEN+L  S SDDA +K+ DFGFAK   DL+T    ACG+P YVAPEI+    YG  VD+WSLGV+ + LL GY PF+  +   LF AI    + F S +W  +S +AK+FI  ML  +P QRWTA+QLL H W+
Sbjct:   63 KYALGKRLGSGSFAIVRQGVELTTGKTFAVKCIDTSSLSSADAAALKQEISILKQLHHPNIMALHEVYTEANYTYLVTELLDGGELFDRIVEKTFYSEKEARDVVRVVLDAIKYCHGRGVVHRDLKPENLLLTSKSDDASIKVADFGFAKH-DDLSTGLGTACGSPGYVAPEILQRQKYGKAVDIWSLGVITFILLCGYPPFHNDNQAKLFAAIKLGTFKFKSPYWDDISDDAKDFISKMLCLEPAQRWTAEQLLKHCWL 321          
BLAST of jgi.p|Trimin1|177677 vs. uniprot
Match: A0A812N3V3_SYMMI (CaMKI protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812N3V3_SYMMI)

HSP 1 Score: 236 bits (602), Expect = 2.120e-71
Identity = 123/274 (44.89%), Postives = 169/274 (61.68%), Query Frame = 1
Query:   82 TGAAGPRCTLDQRYLIGRRLGKGAFSHVFECTSLSTHVKYAVKCVDTRRLRASDLASLKREICISSSLHHPGVCAVIELFEDGTGTSIVQELAAGGDLFDRIQQRTCYMEAPAAAVMARLLETVAHLHTAGIVHRDIKPENILCVSDSDDADVKLTDFGFAKRLSDLNTRDEACGTPQYVAPEIILGGAYGTKVDVWSLGVVAYALLGGYAPFYAKSAQCLFRAIVQADYHFHSKFWGHVSLEAKNFIRCMLQADPDQRWTAQQLLSHPWILSH 903
            +G++  +      Y I   LG+GAFS V      +T  K AVK +  + L  +DL  L+ EI I   L HP +  + E+FE+     IV EL  GG+LFDRI +R+ Y E  A  ++   LETVA++H A +VHRD+KPEN+L  S  +D  +K+ DFGFAKR+ DL+  + ACGT  YVAPE+I   +YG +VD+WS+GV+ Y LL GY PFY++S   L   I    Y FH   W  VS +AK+FI  ML  D +QRWTA++L+ HPW+ +H
Sbjct:    3 SGSSAAKKKFSDCYTIFSDLGEGAFSVVKLAVDKNTGNKVAVKVIQKKALPKADLLCLQSEIDILRELDHPHIIKLYEVFEEKGVCFIVTELVQGGELFDRIVERSGYTEKNARDLIKIFLETVAYMHDAQVVHRDLKPENLLLSSAVEDTSIKVADFGFAKRVQDLSRTEIACGTIDYVAPEVIEEKSYGVEVDIWSMGVICYVLLAGYPPFYSESESELLALIKSGSYTFHDNGWSDVSDDAKDFISRMLVIDQEQRWTARELMEHPWMTAH 276          
BLAST of jgi.p|Trimin1|177677 vs. uniprot
Match: B8C8L4_THAPS (Myosin light chain kinase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C8L4_THAPS)

HSP 1 Score: 233 bits (595), Expect = 3.180e-70
Identity = 120/285 (42.11%), Postives = 172/285 (60.35%), Query Frame = 1
Query:   67 APQVVTGAAGPRCTLDQRYLIGRRLGKGAFSHVFECTSLSTHVKYAVKCVDTRRLRASDLASLKREICISSSLHHPGVCAVIELFEDGTGTSIVQELAAGGDLFDRIQQRTCYMEAPAAAVMARLLETVAHLHTAGIVHRDIKPENILCVSDSDDADVKLTDFGFAKRLSDLNTRDEACGTPQYVAPEIILGGAYGTKVDVWSLGVVAYALLGGYAPFYAKSAQCLFRAIVQADYHFHSKFWGHVSLEAKNFIRCMLQADPDQRWTAQQLLSHPWILSHVTRCAA 921
            AP+    +A  + T D  Y  G+ LG+GAFS V E T   T   YAVK V   +L   D  +LK EI + + L H  +  + E+FE+ +   +V E   GG+LFDRI  ++ Y E  A  V   L E++   H+  + HRD+KPEN+L  ++ +D+D+K+ DFGFAK++   N+    CGTP YVAPEI+ G  Y TK D+WSLGV+ Y LLGGY PF  ++ + LFR I +  Y FH ++WG VS +AKN I  +L  DP +R +A + L+H W+++   + AA
Sbjct:   17 APKAAAKSATKKATFDGSYKRGKTLGEGAFSVVIEATKKDTDESYAVKVVTKSKLTKEDEVALKDEIAVLNELKHQHIIRLYEVFEEPSYYYLVTEQMRGGELFDRIVSKSYYNEKEARDVCKILFESIGFCHSKSVAHRDLKPENLLLRAEDNDSDIKIADFGFAKKVLTPNSLTTQCGTPGYVAPEILEGVPYDTKSDMWSLGVIIYILLGGYPPFIEQNQRELFRKIRKGQYEFHEEYWGSVSDDAKNLISSLLTVDPAKRLSASEALNHKWMVADGDKLAA 301          
BLAST of jgi.p|Trimin1|177677 vs. uniprot
Match: A0A507EW49_9FUNG (Protein kinase domain-containing protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A507EW49_9FUNG)

HSP 1 Score: 234 bits (598), Expect = 4.140e-70
Identity = 116/264 (43.94%), Postives = 171/264 (64.77%), Query Frame = 1
Query:  109 LDQRYLIGRRLGKGAFSHVFECTSLSTHVKYAVKCVDTRRLRASDLASLKREICISSSLHHPGVCAVIELFEDGTGTSIVQELAAGGDLFDRIQQRTCYMEAPAAAVMARLLETVAHLHTAGIVHRDIKPENILCVSDSDDADVKLTDFGFAKRLSDLNTRDEACGTPQYVAPEIILGGAYGTKVDVWSLGVVAYALLGGYAPFYAK--SAQCLFRAIVQADYHFHSKFWGHVSLEAKNFIRCMLQADPDQRWTAQQLLSHPWI 894
             D+ Y IG++LG G+F+ V ECT  S   K+A K +D  +LR   L  LK E+ +   ++HP +  + ++ E G    +V +LA GG+LFDRI  +  Y E  A+A++ +LL  +A+LH   IVHRD+KPEN+L    S+D+D+ +TDFG +K + + N    ACGTP YVAPEI+    +G  VD+W++GV+ Y LL GY PF+A+  S   LFRAI++ DY F  ++W  +S  AK+FIR +L +DP +R TA+  L+HPW+
Sbjct:   52 FDEHYFIGKQLGIGSFAVVKECTRKSDSAKFAAKIIDKAQLRGK-LEMLKMEVDVLKRINHPNIIGLCDIHETGKHVYLVTQLATGGELFDRIFTKGSYTEKDASALVRQLLTAIAYLHDMDIVHRDLKPENLLFKDPSEDSDLMITDFGLSKMVEEGNFLQTACGTPHYVAPEILQQKGHGKPVDMWAIGVITYVLLCGYTPFWAEDNSNTSLFRAILECDYQFDEEYWADISDAAKDFIRRLLVSDPTRRATAKDALTHPWL 314          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|177677 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z6R6_9STRA2.160e-275100.00Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A835YJJ7_9STRA2.810e-14275.37Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A835ZHC9_9STRA7.280e-7846.24Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A7S3XZF5_HETAK9.970e-7445.20Phosphorylase kinase n=2 Tax=Heterosigma akashiwo ... [more]
W4FK15_9STRA2.160e-7343.86CAMK protein kinase n=2 Tax=Aphanomyces astaci Tax... [more]
A0A4D9CNB5_9STRA2.410e-7344.91Protein kinase domain-containing protein n=2 Tax=M... [more]
A0A6G0WA61_9STRA6.400e-7347.31Phosphorylase kinase n=1 Tax=Aphanomyces euteiches... [more]
A0A812N3V3_SYMMI2.120e-7144.89CaMKI protein n=1 Tax=Symbiodinium microadriaticum... [more]
B8C8L4_THAPS3.180e-7042.11Myosin light chain kinase n=1 Tax=Thalassiosira ps... [more]
A0A507EW49_9FUNG4.140e-7043.94Protein kinase domain-containing protein n=2 Tax=S... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_157contigContig_157:13790..15236 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|177677|e_gw1.157.49.1
BRITEko00000,ko00001,ko01000,ko01001
KEGG Pathwayko04921,ko04925,map04921,map04925
KEGG koko:K08794
EC2.7.11.17
Descriptionprotein serine/threonine kinase activity
COG categoryT
Max annot lvl2759|Eukaryota
EggNOG OGsKOG0032@1|root,KOG0032@2759|Eukaryota
Evalue2.65e-71
Seed ortholog42099.EPrPV00000013946
Hectar predicted targeting categoryother localisation
TranscriptId177999
TrackFilteredModels1
ProteinId177677
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|177677gene_16344Tribonema minus UTEX_B_3156 geneContig_157 13790..15236 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_16344_1exon_16344_1Tribonema minus UTEX_B_3156 exonContig_157 13790..14274 +
exon_16344_2exon_16344_2Tribonema minus UTEX_B_3156 exonContig_157 14522..15236 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_16344CDS_16344Tribonema minus UTEX_B_3156 CDSContig_157 13790..14274 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|177677Trimin1|177677|e_gw1.157.49.1Tribonema minus UTEX_B_3156 polypeptideContig_157 13790..15236 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_16344 ID=mRNA_16344|Name=jgi.p|Trimin1|177677|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1200bp|location=Sequence derived from alignment at Contig_157:13790..15236+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGACAGCTCGGACATTATCTTGGAGCCCTGGCCTAGTGCTGCTCCCCA
GCAATGCGACAGCGCTGCGCCACAAGTGGTCACTGGAGCTGCGGGCCCTA
GATGTACGCTGGATCAGCGCTATCTCATAGGCAGACGCCTGGGTAAGGGC
GCCTTTTCCCACGTCTTCGAGTGCACCAGCCTCTCAACGCACGTCAAGTA
TGCCGTCAAATGCGTTGACACCAGGCGGCTTCGGGCCAGCGATCTCGCGT
CGCTTAAGAGGGAGATCTGCATCAGCTCCAGCTTGCATCACCCGGGAGTG
TGCGCTGTCATAGAGCTCTTCGAGGACGGCACGGGGACCAGCATCGTGCA
GGAGTTGGCGGCGGGGGGTGACTTGTTCGACAGGATACAGCAGAGGACCT
GCTACATGGAGGCGCCGGCGGCGGCGGTCATGGCGAGGCTGCTCGAGACG
GTCGCCCACCTCCACACCGCGGGCATCGTTCACAGGGACATCAAGCCCGA
GAACATCCTGTGCGTGAGCGACAGCGACGACGCCGACGTCAAGCTCACCG
ACTTTGGCTTCGCCAAGCGCCTGTCGGACCTGAACACGCGCGACGAGGCA
TGCGGCACCCCGCAGTACGTCGCGCCGGAGATCATCCTAGGCGGTGCCTA
CGGCACCAAGGTCGACGTCTGGTCCCTAGGCGTCGTCGCGTACGCCCTCC
TCGGCGGCTACGCGCCCTTCTACGCCAAGTCCGCGCAGTGCCTCTTCCGC
GCCATCGTCCAGGCGGACTACCACTTCCACAGCAAGTTCTGGGGGCACGT
CAGCCTCGAGGCCAAGAACTTCATCCGCTGCATGCTGCAGGCGGACCCGG
ACCAGCGCTGGACCGCGCAGCAGCTGCTCTCCCACCCCTGGATCCTGAGC
CACGTTACGCGCTGCGCTGCGGCGGCGGCGGCAGCAGCTCCAGACGGCAT
TGCGCCGCTGGCGGAGATGCCCGCGGCGCCCCTGCTGGACGCCGCCGCGG
CAGCAGCGGCAGCAGCGGCGGCGGCGGCGGCAGCGGCGCCGCCGCCGCCG
GCGCAGCACTCGCCGCTCGCGCCGCCGCGCACGCTCGGCGTCCGCGGCAG
CCAGCGGCGCGTCGCCAACGGCCTGCGGTGGCTGCAGACGGTGCTCCACG
CGCGCGCGCCCAGACCGCCGCACGGCCACCACCACGCCGCGCTGCGATAG
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protein sequence of jgi.p|Trimin1|177677

>Trimin1|177677|e_gw1.157.49.1 ID=Trimin1|177677|e_gw1.157.49.1|Name=jgi.p|Trimin1|177677|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=400bp
MDSSDIILEPWPSAAPQQCDSAAPQVVTGAAGPRCTLDQRYLIGRRLGKG
AFSHVFECTSLSTHVKYAVKCVDTRRLRASDLASLKREICISSSLHHPGV
CAVIELFEDGTGTSIVQELAAGGDLFDRIQQRTCYMEAPAAAVMARLLET
VAHLHTAGIVHRDIKPENILCVSDSDDADVKLTDFGFAKRLSDLNTRDEA
CGTPQYVAPEIILGGAYGTKVDVWSLGVVAYALLGGYAPFYAKSAQCLFR
AIVQADYHFHSKFWGHVSLEAKNFIRCMLQADPDQRWTAQQLLSHPWILS
HVTRCAAAAAAAAPDGIAPLAEMPAAPLLDAAAAAAAAAAAAAAAAPPPP
AQHSPLAPPRTLGVRGSQRRVANGLRWLQTVLHARAPRPPHGHHHAALR*
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mRNA from alignment at Contig_157:13790..15236+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_16344 ID=mRNA_16344|Name=jgi.p|Trimin1|177677|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1447bp|location=Sequence derived from alignment at Contig_157:13790..15236+ (Tribonema minus UTEX_B_3156 )
ATGGACAGCTCGGACATTATCTTGGAGCCCTGGCCTAGTGCTGCTCCCCA GCAATGCGACAGCGCTGCGCCACAAGTGGTCACTGGAGCTGCGGGCCCTA GATGTACGCTGGATCAGCGCTATCTCATAGGCAGACGCCTGGGTAAGGGC GCCTTTTCCCACGTCTTCGAGTGCACCAGCCTCTCAACGCACGTCAAGTA TGCCGTCAAATGCGTTGACACCAGGCGGCTTCGGGCCAGCGATCTCGCGT CGCTTAAGAGGGAGATCTGCATCAGCTCCAGCTTGCATCACCCGGGAGTG TGCGCTGTCATAGAGCTCTTCGAGGACGGCACGGGGACCAGCATCGTGCA GGAGTTGGCGGCGGGGGGTGACTTGTTCGACAGGATACAGCAGAGGACCT GCTACATGGAGGCGCCGGCGGCGGCGGTCATGGCGAGGCTGCTCGAGACG GTCGCCCACCTCCACACCGCGGGCATCGTTCACAGGTAGGACTGTGCAAC GGCGTTTTATGCTCTTTTGATATGGCGTACATCAGTATGCCGAGCAACTT ACATCTCAAGACCCTGTGAGTGGAAACAAGTCGAAAGTTCAACATGCATG TTGGTTTCCAAGGACAACGTTTGCAAGCAAAATCATTGGCGCTGGGTCGT GGCGAACAGTGCATGGTATCACACATGTCATGCATGGAAATATTGAGTGA TTGTGCAATCTACCTCCTCATCTGCCCCGCAGGGACATCAAGCCCGAGAA CATCCTGTGCGTGAGCGACAGCGACGACGCCGACGTCAAGCTCACCGACT TTGGCTTCGCCAAGCGCCTGTCGGACCTGAACACGCGCGACGAGGCATGC GGCACCCCGCAGTACGTCGCGCCGGAGATCATCCTAGGCGGTGCCTACGG CACCAAGGTCGACGTCTGGTCCCTAGGCGTCGTCGCGTACGCCCTCCTCG GCGGCTACGCGCCCTTCTACGCCAAGTCCGCGCAGTGCCTCTTCCGCGCC ATCGTCCAGGCGGACTACCACTTCCACAGCAAGTTCTGGGGGCACGTCAG CCTCGAGGCCAAGAACTTCATCCGCTGCATGCTGCAGGCGGACCCGGACC AGCGCTGGACCGCGCAGCAGCTGCTCTCCCACCCCTGGATCCTGAGCCAC GTTACGCGCTGCGCTGCGGCGGCGGCGGCAGCAGCTCCAGACGGCATTGC GCCGCTGGCGGAGATGCCCGCGGCGCCCCTGCTGGACGCCGCCGCGGCAG CAGCGGCAGCAGCGGCGGCGGCGGCGGCAGCGGCGCCGCCGCCGCCGGCG CAGCACTCGCCGCTCGCGCCGCCGCGCACGCTCGGCGTCCGCGGCAGCCA GCGGCGCGTCGCCAACGGCCTGCGGTGGCTGCAGACGGTGCTCCACGCGC GCGCGCCCAGACCGCCGCACGGCCACCACCACGCCGCGCTGCGATAG
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Coding sequence (CDS) from alignment at Contig_157:13790..15236+

>mRNA_16344 ID=mRNA_16344|Name=jgi.p|Trimin1|177677|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1200bp|location=Sequence derived from alignment at Contig_157:13790..15236+ (Tribonema minus UTEX_B_3156 )
ATGGACAGCTCGGACATTATCTTGGAGCCCTGGCCTAGTGCTGCTCCCCA
GCAATGCGACAGCGCTGCGCCACAAGTGGTCACTGGAGCTGCGGGCCCTA
GATGTACGCTGGATCAGCGCTATCTCATAGGCAGACGCCTGGGTAAGGGC
GCCTTTTCCCACGTCTTCGAGTGCACCAGCCTCTCAACGCACGTCAAGTA
TGCCGTCAAATGCGTTGACACCAGGCGGCTTCGGGCCAGCGATCTCGCGT
CGCTTAAGAGGGAGATCTGCATCAGCTCCAGCTTGCATCACCCGGGAGTG
TGCGCTGTCATAGAGCTCTTCGAGGACGGCACGGGGACCAGCATCGTGCA
GGAGTTGGCGGCGGGGGGTGACTTGTTCGACAGGATACAGCAGAGGACCT
GCTACATGGAGGCGCCGGCGGCGGCGGTCATGGCGAGGCTGCTCGAGACG
GTCGCCCACCTCCACACCGCGGGCATCGTTCACAGGGACATCAAGCCCGA
GAACATCCTGTGCGTGAGCGACAGCGACGACGCCGACGTCAAGCTCACCG
ACTTTGGCTTCGCCAAGCGCCTGTCGGACCTGAACACGCGCGACGAGGCA
TGCGGCACCCCGCAGTACGTCGCGCCGGAGATCATCCTAGGCGGTGCCTA
CGGCACCAAGGTCGACGTCTGGTCCCTAGGCGTCGTCGCGTACGCCCTCC
TCGGCGGCTACGCGCCCTTCTACGCCAAGTCCGCGCAGTGCCTCTTCCGC
GCCATCGTCCAGGCGGACTACCACTTCCACAGCAAGTTCTGGGGGCACGT
CAGCCTCGAGGCCAAGAACTTCATCCGCTGCATGCTGCAGGCGGACCCGG
ACCAGCGCTGGACCGCGCAGCAGCTGCTCTCCCACCCCTGGATCCTGAGC
CACGTTACGCGCTGCGCTGCGGCGGCGGCGGCAGCAGCTCCAGACGGCAT
TGCGCCGCTGGCGGAGATGCCCGCGGCGCCCCTGCTGGACGCCGCCGCGG
CAGCAGCGGCAGCAGCGGCGGCGGCGGCGGCAGCGGCGCCGCCGCCGCCG
GCGCAGCACTCGCCGCTCGCGCCGCCGCGCACGCTCGGCGTCCGCGGCAG
CCAGCGGCGCGTCGCCAACGGCCTGCGGTGGCTGCAGACGGTGCTCCACG
CGCGCGCGCCCAGACCGCCGCACGGCCACCACCACGCCGCGCTGCGATAG
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