mRNA_16265 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|179593
Unique NamemRNA_16265
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|179593 vs. uniprot
Match: A0A835Z5V1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5V1_9STRA)

HSP 1 Score: 587 bits (1514), Expect = 5.420e-212
Identity = 295/295 (100.00%), Postives = 295/295 (100.00%), Query Frame = 1 
Query:    1 NAKPAHYNTSWWTAALYFAILLVSKYTLPADLHPSQPTMSHVWYYGWVTAVSTGFGAVPLLFANELGEQMLGVSNAIACGMMLSASYSLVMEGAGLEPDPGCAIHSAAWRVAVGVLAGLAFILPTKRVLDKYEDIHLGDLAGADAKKALLIVFVMFLHSFSEGVGIGVSFGGSTGAQLGFLISATLAVHNVPEGLAVALVLHPRGVSKLNTGLWCIFTSLPQPLMAVLAYAFVEQFLPFLPVGLGFAAGAMFWVAVAELFVEAVEATSRGVACAVTLCAFGAMLHIHSLLESVEH 885
            NAKPAHYNTSWWTAALYFAILLVSKYTLPADLHPSQPTMSHVWYYGWVTAVSTGFGAVPLLFANELGEQMLGVSNAIACGMMLSASYSLVMEGAGLEPDPGCAIHSAAWRVAVGVLAGLAFILPTKRVLDKYEDIHLGDLAGADAKKALLIVFVMFLHSFSEGVGIGVSFGGSTGAQLGFLISATLAVHNVPEGLAVALVLHPRGVSKLNTGLWCIFTSLPQPLMAVLAYAFVEQFLPFLPVGLGFAAGAMFWVAVAELFVEAVEATSRGVACAVTLCAFGAMLHIHSLLESVEH
Sbjct:    1 NAKPAHYNTSWWTAALYFAILLVSKYTLPADLHPSQPTMSHVWYYGWVTAVSTGFGAVPLLFANELGEQMLGVSNAIACGMMLSASYSLVMEGAGLEPDPGCAIHSAAWRVAVGVLAGLAFILPTKRVLDKYEDIHLGDLAGADAKKALLIVFVMFLHSFSEGVGIGVSFGGSTGAQLGFLISATLAVHNVPEGLAVALVLHPRGVSKLNTGLWCIFTSLPQPLMAVLAYAFVEQFLPFLPVGLGFAAGAMFWVAVAELFVEAVEATSRGVACAVTLCAFGAMLHIHSLLESVEH 295
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BLAST of jgi.p|Trimin1|179593 vs. uniprot
Match: A0A836CI09_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI09_9STRA)

HSP 1 Score: 459 bits (1181), Expect = 6.090e-161
Identity = 231/275 (84.00%), Postives = 250/275 (90.91%), Query Frame = 1 
Query:   58 ILLVSKYTLPADLHPSQPTMSHVWYYGWVTAVSTGFGAVPLLFANELGEQMLGVSNAIACGMMLSASYSLVMEGAGLEPDPGCAIHSAAWRVAVGVLAGLAFILPTKRVLDKYEDIHLGDLAGADAKKALLIVFVMFLHSFSEGVGIGVSFGGSTGAQLGFLISATLAVHNVPEGLAVALVLHPRGVSKLNTGLWCIFTSLPQPLMAVLAYAFVEQFLPFLPVGLGFAAGAMFWVAVAELFVEAVEATSRGVACAVTLCAFGAMLHIHSLLESVE 882
            I+L+SKYTLP DLHP QPT++HVWYYGWVTAVSTG GAVPLLFA+ELGEQMLGVSNAIACGMMLSASYSL+MEGA L  DP C + SAA RVA GVLAGLAFILP K+VLDKYEDIH+GDL G DAKKALLIV VMFLHSFSEGVGIGVSFGGSTGAQLGFLISATLAVHN+PEGLAVALVLHPRGVSKLNTGLWCIFTSLPQPLMAVLAY FVEQFLPFLPVGLGFAAGAMFWVA+AEL VEAVE+TS  VA ++ + +F  ML++HSLLE+ E
Sbjct:   39 IVLISKYTLPTDLHPVQPTLNHVWYYGWVTAVSTGLGAVPLLFASELGEQMLGVSNAIACGMMLSASYSLIMEGANLPADPDCIVASAALRVAAGVLAGLAFILPAKKVLDKYEDIHIGDLVGVDAKKALLIVLVMFLHSFSEGVGIGVSFGGSTGAQLGFLISATLAVHNIPEGLAVALVLHPRGVSKLNTGLWCIFTSLPQPLMAVLAYKFVEQFLPFLPVGLGFAAGAMFWVAIAELAVEAVESTSLPVAISIMVVSFCTMLYLHSLLEAAE 313
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BLAST of jgi.p|Trimin1|179593 vs. uniprot
Match: A0A6H5JQY5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JQY5_9PHAE)

HSP 1 Score: 372 bits (956), Expect = 2.580e-125
Identity = 199/298 (66.78%), Postives = 227/298 (76.17%), Query Frame = 1 
Query:   10 PAHYNTSWWTAALYFAILLVSKYTLPADLHPSQPTMSHVWYYGWVTAVSTGFGAVPLLFANELGEQMLGVSNAIACGMMLSASYSLVMEGAGL-EPDPGCAIHSAAW---------RVAVGVLAGLAFILPTKRVLDKYEDIHLGDLAGADAKKALLIVFVMFLHSFSEGVGIGVSFGGSTGAQLGFLISATLAVHNVPEGLAVALVLHPRGVSKLNTGLWCIFTSLPQPLMAVLAYAFVEQFLPFLPVGLGFAAGAMFWVAVAELFVEAVEATSRGVACAVTLCAFGAMLHIHSLLE 873
            P H+  S WT A Y  +L V+KYTLP +LH S PT+ HVW+YGWVTA+STG GA PL+  ++LG+ ML   NAIA GMMLSAS+SLV EGA + EP+   A  SA +         RV +GV+AGL FIL TK+VLD YEDI LG+L G DAKK LLIVFVM LHSFSEGVGIGVSFGG  GA+LGFLISATLAVHNVPEGLAVALVLHPRGVSKLNTGLWC+FTSLPQPLMAV A+ FV QF+PFLP+GLGFAAGAMFWVA  ELF EA+E +S   A   T  +F  ML+ HS  E
Sbjct:  111 PHHHPNSKWTWAGYLLLLAVTKYTLPDELHTSAPTLKHVWFYGWVTALSTGVGAAPLILTHDLGKAMLAYGNAIAAGMMLSASFSLVSEGATVVEPNGSTAEWSAVFAAFLGAPWARVVLGVVAGLVFILSTKKVLDNYEDIKLGELHGMDAKKVLLIVFVMTLHSFSEGVGIGVSFGGDGGARLGFLISATLAVHNVPEGLAVALVLHPRGVSKLNTGLWCVFTSLPQPLMAVPAFLFVGQFMPFLPIGLGFAAGAMFWVACFELFSEAIEDSSIIKASVTTGLSFAVMLYAHSYFE 408
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BLAST of jgi.p|Trimin1|179593 vs. uniprot
Match: A0A7S0GIR6_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GIR6_9STRA)

HSP 1 Score: 290 bits (743), Expect = 1.110e-94
Identity = 158/284 (55.63%), Postives = 193/284 (67.96%), Query Frame = 1 
Query:   34 WTAALYFAILLVSKYTLPADLHPS-QPTMSHVWYYGWVTAVSTGFGAVPLLFANELGEQMLGVSNAIACGMMLSASYSLVMEGAGL-EPDPGCAIHSAAWRVAVGVLAGLAFILPTKRVLDKYEDIHLG--DLAGADAKKALLIVFVMFLHSFSEGVGIGVSFGGSTGAQLGFLISATLAVHNVPEGLAVALVLHPRGVSKLNTGLWCIFTSLPQPLMAVLAYAFVEQFLPFLPVGLGFAAGAMFWVAVAELFVEAVEATSRGVACAVTLCAFGAMLHIHSLLE 873
            W  A +   ++++    P +L P  +PT+ HVWYYGW+TAVSTGFG VPL+F   L +  +GVSNAIA GMM++ASYSL++EG    EPD    I S A R  VGV+ GL FI  TK+ LD  +D+ LG  D+  ADAKK +LI+ VM +HSFSEGVGIGVSFGG  GA LG  ISA+LAVHNVPEG AVA+V  PR VSKL   + CI TSLPQPLMAV AY FV  F+P LPVGLGFA GAM WVA  EL +EA E T       V++ +   ML + + L+
Sbjct:   11 WVTAAFILSVIITYVGCPENLQPEGKPTLQHVWYYGWITAVSTGFGVVPLIFTPTLNKYYIGVSNAIAAGMMIAASYSLIIEGLFFDEPDDSWEIVSPAIRTVVGVICGLVFIKWTKKFLDNNDDLTLGNLDIDRADAKKIMLIMLVMTVHSFSEGVGIGVSFGGQNGADLGMFISASLAVHNVPEGFAVAIVWLPRKVSKLTAAMMCILTSLPQPLMAVPAYMFVRYFIPILPVGLGFAGGAMAWVAFMELMIEAYEDTDAVTTGVVSVISLSFMLALQNALK 294
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BLAST of jgi.p|Trimin1|179593 vs. uniprot
Match: A0A7S1FXS5_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FXS5_9STRA)

HSP 1 Score: 291 bits (745), Expect = 1.470e-94
Identity = 154/271 (56.83%), Postives = 197/271 (72.69%), Query Frame = 1 
Query:    4 AKPAHYNTSWWTAALYFAILLVSKY-TLPADL--HPSQP-TMSHVWYYGWVTAVSTGFGAVPLLFANELGEQMLGVSNAIACGMMLSASYSLVMEGAGLEPDPGCAIHSAAWRVAVGVLAGLAFILPTKRVLDKYEDIHLGDLAGADAKKALLIVFVMFLHSFSEGVGIGVSFGGSTGAQLGFLISATLAVHNVPEGLAVALVLHPRGVSKLNTGLWCIFTSLPQPLMAVLAYAFVEQFLPFLPVGLGFAAGAMFWVAVAELFVEAVEATS 804
            A PA   +S  ++ +  A+++   Y T P +L   P QP ++ HVWY+GW+TA+STG G +PL+F ++  +  +G+SNA+A GMM+ AS+SL+ EG         +   A +R A+G   GLAFI+ TK  +D +ED+ +G+L GADAKK LLIV VM LHS +EGVGIGVSFGGS G  LG  ISA+LAVHNVPEGLAVA+VL PRGVSKL+  LWCIFTS+PQP+MAV AY FVE F+PFLP GLGFA GAM WVA+AEL VEA+E T+
Sbjct:   30 AAPASSPSSPLSSYVGMALVIAITYATYPDNLIPDPHQPASIHHVWYHGWITAISTGLGVLPLVFVSDFNKFWVGISNAVAAGMMMGASHSLLYEGWTFSDPSDTSTICAEYRSAIGCAVGLAFIMFTKSFIDSHEDLEVGNLVGADAKKVLLIVLVMTLHSLTEGVGIGVSFGGSHGHALGVFISASLAVHNVPEGLAVAVVLLPRGVSKLSAALWCIFTSVPQPIMAVPAYLFVEHFIPFLPAGLGFAGGAMLWVALAELLVEAIEDTN 300
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BLAST of jgi.p|Trimin1|179593 vs. uniprot
Match: A0A7S4I808_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I808_9STRA)

HSP 1 Score: 288 bits (736), Expect = 5.490e-93
Identity = 153/275 (55.64%), Postives = 198/275 (72.00%), Query Frame = 1 
Query:   58 ILLVSKYTLPADLHP-SQPTMSHVWYYGWVTAVSTGFGAVPLLFANELGEQMLGVSNAIACGMMLSASYSLVMEGAGL-EPDPGCAIHSAAWRVAVGVLAGLAFILPTKRVLDKYEDIHLGDLAGADAKKALLIVFVMFLHSFSEGVGIGVSFGGSTGAQLGFLISATLAVHNVPEGLAVALVLHPRGVSKLNTGLWCIFTSLPQPLMAVLAYAFVEQFLPFLPVGLGFAAGAMFWVAVAELFVEAVEAT-SRGVACAVTLCAFGAMLHIHSLLE 873
            +L +S +T P  L P  +PT+ HVWY+GW++A+STG G VPL+ A +L    +GVSNAIA GMM++ASYSL++EG    EPD    + S A R  +G   GLAFI+ TK  L+++E++H+G LAGAD ++ LLI+FVM LHSFSEGVGIGVSFGG  G++LG  ISA+LAVHNVPEGLAVA+VL PR VSKL   LWCI TS+PQP+MAV A+ FV  F+P LPVGLGFA GAM WVA  EL  EA E T S  +   ++  + G M+ + + ++
Sbjct:   63 LLAISYFTCPDSLQPVGKPTVQHVWYFGWISALSTGLGVVPLVIAPKLDTFWVGVSNAIAAGMMIAASYSLMVEGCDFDEPDDISHLSSTA-RTFLGAGLGLAFIVGTKHFLEQHEELHIGSLAGADFRRVLLIIFVMTLHSFSEGVGIGVSFGGENGSELGVFISASLAVHNVPEGLAVAVVLLPRRVSKLTAALWCILTSIPQPIMAVPAFLFVHYFIPILPVGLGFAGGAMAWVAFFELLSEAFEDTKSTPLTVVISTASLGVMMALQNSID 336
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BLAST of jgi.p|Trimin1|179593 vs. uniprot
Match: B7GAG8_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GAG8_PHATC)

HSP 1 Score: 287 bits (734), Expect = 8.810e-93
Identity = 157/286 (54.90%), Postives = 192/286 (67.13%), Query Frame = 1 
Query:   25 TSWWTAALYFAILLVSKYTLPADLHP-SQPTMSHVWYYGWVTAVSTGFGAVPLLFANELGEQMLGVSNAIACGMMLSASYSLVMEGAGLEPDPGCAIHSAAWRVAVGVLAGLAFILPTKRVLDKYEDIHLGDLAGA--DAKKALLIVFVMFLHSFSEGVGIGVSFGGSTGAQLGFLISATLAVHNVPEGLAVALVLHPRGVSKLNTGLWCIFTSLPQPLMAVLAYAFVEQFLPFLPVGLGFAAGAMFWVAVAELFVEAVEATSRGVACAVTLCAFGAMLHIHSLLE 873
            T  W   +      +S  T+P    P  QPT++HV+YYGW+TA+STG GA+P LF  ++    +G+SNAIA GMM++ASYSL++EG         +  S   R A+G L GL FIL TK  LD+YED+ +G L G   DA+KALLI FVM LHSFSEGVGIGVSFGG  G++LG  ISA+LAVHNVPEGLA+A+VL PRG S L   +W I TSLPQPLMAV AY FV  F+P LPVGLGFA GAM WVA  EL  EAVE T+      V+LC+   ML    ++E
Sbjct:   44 TPTWIYPVLAGFAALSIVTVPHPFQPHGQPTLNHVFYYGWLTALSTGLGALPFLFLPDIATFWVGISNAIAAGMMVAASYSLLVEGCTYSDPQDHSTVSCELRTALGALLGLGFILATKNFLDRYEDLKVGGLGGTGTDARKALLIFFVMTLHSFSEGVGIGVSFGGVHGSELGVFISASLAVHNVPEGLAIAVVLLPRGASVLTAAVWAISTSLPQPLMAVPAYLFVHHFIPILPVGLGFAGGAMAWVAFFELLSEAVEDTNLLTTIVVSLCSLVTMLFAQHMIE 329
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BLAST of jgi.p|Trimin1|179593 vs. uniprot
Match: A0A1Z5KQD5_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KQD5_FISSO)

HSP 1 Score: 286 bits (731), Expect = 2.670e-92
Identity = 150/283 (53.00%), Postives = 194/283 (68.55%), Query Frame = 1 
Query:   34 WTAALYFAILLVSKYTLPADLHPSQ---PTMSHVWYYGWVTAVSTGFGAVPLLFANELGEQMLGVSNAIACGMMLSASYSLVMEGAGLEPDPGCAIHSAAWRVAVGVLAGLAFILPTKRVLDKYEDIHLGDLAGADAKKALLIVFVMFLHSFSEGVGIGVSFGGSTGAQLGFLISATLAVHNVPEGLAVALVLHPRGVSKLNTGLWCIFTSLPQPLMAVLAYAFVEQFLPFLPVGLGFAAGAMFWVAVAELFVEAVEATSRGVACAVTLCAFGAMLHIHSLLE 873
            W   L   I +++  T+P   HP+    P+  HV+YYGW+TA+STG G +P LF  ++    +GVSNA+A GMML+ASYSL +EG   +     +  S   R  +G   GL FIL TK +LD+YED+ +G L G DA+KALLI FVM LHSFSEGVGIGVSFGG+ G++LG  ISA+LA HNVPEGLA+A++L PRGVS     LW I TSLPQP+MAV AY FV +F+P LP+GLGFAAGAM WVAVAEL +EA++ T+      V + +   ML + + L+
Sbjct:   49 WVYILLLVIAVITVVTIPHPFHPTHHEPPSYQHVFYYGWLTALSTGMGVLPFLFLPQVPSFWIGVSNAVAAGMMLAASYSLFLEGYSHDDPHDTSTWSGLVRTILGAALGLLFILLTKNILDQYEDVKVGVLGGTDARKALLIFFVMTLHSFSEGVGIGVSFGGTHGSELGMFISASLAAHNVPEGLAIAVILLPRGVSTATALLWTISTSLPQPIMAVPAYMFVHEFVPVLPIGLGFAAGAMVWVAVAELLMEAIQDTNVWTTVMVAIPSCMGMLWLQAALD 331
[Close]
BLAST of jgi.p|Trimin1|179593 vs. uniprot
Match: A0A7S2A6Z1_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A6Z1_TRICV)

HSP 1 Score: 286 bits (733), Expect = 2.670e-92
Identity = 153/275 (55.64%), Postives = 198/275 (72.00%), Query Frame = 1 
Query:   58 ILLVSKYTLPADLHP-SQPTMSHVWYYGWVTAVSTGFGAVPLLFANELGEQMLGVSNAIACGMMLSASYSLVMEGAGL-EPDPGCAIHSAAWRVAVGVLAGLAFILPTKRVLDKYEDIHLGDLAGADAKKALLIVFVMFLHSFSEGVGIGVSFGGSTGAQLGFLISATLAVHNVPEGLAVALVLHPRGVSKLNTGLWCIFTSLPQPLMAVLAYAFVEQFLPFLPVGLGFAAGAMFWVAVAELFVEAVEAT-SRGVACAVTLCAFGAMLHIHSLLE 873
            +L +S +T P  L P  +PT+ HVWY+GW++A+STG G +PL+ A +L    +GVSNAIA GMM++ASYSL++EG    EPD    I S A R  +G   GLAFI+ TK  L+++E++H+G LAGAD ++ LLI+FVM LHSFSEGVGIGVSFGG  G++LG  ISA+LAVHNVPEGLAVA+VL PR VSKL   LWCI TS+PQP+MAV A+ FV  F+P LPVGLGFA GAM WVA  EL  EA E T S  +  A++  +   M+ + + ++
Sbjct:   80 VLGISYFTYPDTLQPVGRPTVKHVWYFGWISALSTGLGVLPLVIAPKLDTFYVGVSNAIAAGMMIAASYSLMIEGCTFDEPDDMSQISSTA-RTFLGAGLGLAFIVGTKSFLEQHEELHIGSLAGADFRRVLLIIFVMTLHSFSEGVGIGVSFGGQNGSELGVFISASLAVHNVPEGLAVAVVLLPRKVSKLTAALWCILTSIPQPIMAVPAFLFVHYFIPILPVGLGFAGGAMAWVAFFELLAEAFEDTNSTALTVAISTASLAVMMILQNSID 353
[Close]
BLAST of jgi.p|Trimin1|179593 vs. uniprot
Match: W7TTH2_9STRA (Zinc iron permease n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TTH2_9STRA)

HSP 1 Score: 287 bits (734), Expect = 7.120e-92
Identity = 162/292 (55.48%), Postives = 200/292 (68.49%), Query Frame = 1 
Query:   28 SWWTAALYFAILLVSKYTLPAD-LHPSQPTMS--HVWYYGWVTAVSTGFGAVPLLFANELGEQMLGVSNAIACGMMLSASYSLVMEGAGLEPDPGCAIHSA------AWRVAVGVLAGLAFILPTKRVLDKYEDIHLGDLAGADAKKALLIVFVMFLHSFSEGVGIGVSFGGSTGAQLGFLISATLAVHNVPEGLAVALVLHPRGVSKLNTGLWCIFTSLPQPLMAVLAYAFVEQFLPFLPVGLGFAAGAMFWVAVAELFVEAVEAT-SRGVACAVTLCAFGAMLHIHSLLE 873
            S+W  A+   ++ +S  T P   L   +  MS  HVWY+GW+TA+STG G +P     E+ +  LGVSNA A GMML+AS SLV EG  L+ D    +H        A RV +G+L GL FI+ TKR+LD++ED+ +  L G +A+K LL++FVM LHSF+EGVGIGVSFGG  GA+LG  IS TLAVHNVPEGLAVALVL P+GV+K  T LW IFTSLPQPLMAV AY FVE F+PFLPVGLGFAAGAM WVA+ EL  +AVE T S  V   V   +F AM+ +   L+
Sbjct:  108 SFWHYAIIAGLVYISHATYPGSGLAIGEAGMSLWHVWYFGWITALSTGLGTLPFAVVTEMNKWWLGVSNACAAGMMLAASSSLVYEGMALD-DSAYVLHHGPCLVPQAVRVLLGLLGGLLFIVSTKRLLDQHEDVKVAGLDGLEARKVLLLIFVMTLHSFTEGVGIGVSFGGDKGAKLGVFISLTLAVHNVPEGLAVALVLVPKGVNKWKTALWSIFTSLPQPLMAVPAYCFVESFIPFLPVGLGFAAGAMLWVAIFELLADAVEDTASMLVTGGVGALSFAAMMAVQVYLK 398
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|179593 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z5V1_9STRA5.420e-212100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CI09_9STRA6.090e-16184.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5JQY5_9PHAE2.580e-12566.78Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S0GIR6_9STRA1.110e-9455.63Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S1FXS5_9STRA1.470e-9456.83Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S4I808_9STRA5.490e-9355.64Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
B7GAG8_PHATC8.810e-9354.90Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A1Z5KQD5_FISSO2.670e-9253.00Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S2A6Z1_TRICV2.670e-9255.64Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
W7TTH2_9STRA7.120e-9255.48Zinc iron permease n=2 Tax=Monodopsidaceae TaxID=4... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_196contigContig_196:222630..226874 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|179593|e_gw1.196.55.1
GOsGO:0000041,GO:0003674,GO:0005215,GO:0005385,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006829,GO:0008150,GO:0008324,GO:0015075,GO:0015318,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0046873,GO:0046915,GO:0051179,GO:0051234,GO:0055085,GO:0070838,GO:0071577,GO:0072509,GO:0072511,GO:0098655,GO:0098660,GO:0098662
Descriptionzinc ion transmembrane transporter activity
COG categoryP
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0428@1|root,KOG2474@2759|Eukaryota
Evalue1.13e-123
Seed ortholog2880.D8LTB8
Hectar predicted targeting categorysignal peptide
TranscriptId179915
TrackFilteredModels1
ProteinId179593
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|179593gene_16265Tribonema minus UTEX_B_3156 geneContig_196 222630..226874 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_16265_1exon_16265_1Tribonema minus UTEX_B_3156 exonContig_196 222630..222836 +
exon_16265_2exon_16265_2Tribonema minus UTEX_B_3156 exonContig_196 223771..223962 +
exon_16265_3exon_16265_3Tribonema minus UTEX_B_3156 exonContig_196 225419..225771 +
exon_16265_4exon_16265_4Tribonema minus UTEX_B_3156 exonContig_196 226739..226874 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_16265CDS_16265Tribonema minus UTEX_B_3156 CDSContig_196 222630..222836 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|179593Trimin1|179593|e_gw1.196.55.1Tribonema minus UTEX_B_3156 polypeptideContig_196 222630..226874 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_16265 ID=mRNA_16265|Name=jgi.p|Trimin1|179593|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=888bp|location=Sequence derived from alignment at Contig_196:222630..226874+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
AACGCAAAGCCCGCACACTACAACACCAGCTGGTGGACCGCTGCGCTGTA
CTTTGCAATTTTGCTCGTGTCCAAGTACACGCTGCCGGCCGACCTTCACC
CCTCGCAGCCAACGATGAGCCACGTGTGGTATTACGGCTGGGTCACCGCT
GTGTCAACGGGGTTTGGAGCTGTGCCGCTGTTGTTTGCTAACGAGCTGGG
CGAGCAGATGCTGGGGGTGAGCAATGCCATCGCATGTGGCATGATGCTCA
GCGCATCATACTCGCTGGTCATGGAAGGCGCGGGACTGGAGCCTGACCCG
GGGTGCGCGATTCACAGCGCAGCGTGGCGCGTCGCTGTTGGAGTGCTGGC
GGGGCTGGCATTTATTCTGCCCACGAAGAGGGTGCTGGATAAGTACGAGG
ACATCCACCTGGGCGACCTGGCGGGCGCGGACGCCAAAAAGGCGCTGCTC
ATCGTCTTTGTCATGTTCCTGCACTCATTCAGCGAGGGCGTGGGCATCGG
CGTCAGTTTCGGCGGCTCCACTGGCGCGCAGCTCGGCTTCCTCATCAGCG
CCACGCTCGCCGTTCACAACGTCCCCGAGGGCCTTGCGGTGGCGCTGGTG
CTGCACCCGCGCGGCGTGAGCAAGCTCAACACGGGCCTCTGGTGCATCTT
CACGTCGCTGCCGCAGCCGCTCATGGCGGTGCTCGCGTACGCATTTGTGG
AGCAGTTCCTGCCTTTCCTGCCTGTGGGGCTGGGGTTCGCCGCGGGCGCC
ATGTTCTGGGTAGCGGTTGCAGAACTCTTTGTGGAGGCGGTGGAGGCCAC
GTCGCGCGGTGTCGCGTGCGCCGTCACGCTCTGCGCCTTTGGCGCCATGC
TACACATACACTCGCTGCTGGAGAGTGTTGAGCACTGA
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protein sequence of jgi.p|Trimin1|179593

>Trimin1|179593|e_gw1.196.55.1 ID=Trimin1|179593|e_gw1.196.55.1|Name=jgi.p|Trimin1|179593|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=296bp
NAKPAHYNTSWWTAALYFAILLVSKYTLPADLHPSQPTMSHVWYYGWVTA
VSTGFGAVPLLFANELGEQMLGVSNAIACGMMLSASYSLVMEGAGLEPDP
GCAIHSAAWRVAVGVLAGLAFILPTKRVLDKYEDIHLGDLAGADAKKALL
IVFVMFLHSFSEGVGIGVSFGGSTGAQLGFLISATLAVHNVPEGLAVALV
LHPRGVSKLNTGLWCIFTSLPQPLMAVLAYAFVEQFLPFLPVGLGFAAGA
MFWVAVAELFVEAVEATSRGVACAVTLCAFGAMLHIHSLLESVEH*
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mRNA from alignment at Contig_196:222630..226874+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_16265 ID=mRNA_16265|Name=jgi.p|Trimin1|179593|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4245bp|location=Sequence derived from alignment at Contig_196:222630..226874+ (Tribonema minus UTEX_B_3156 )
AACGCAAAGCCCGCACACTACAACACCAGCTGGTGGACCGCTGCGCTGTA
CTTTGCAATTTTGCTCGTGTCCAAGTACACGCTGCCGGCCGACCTTCACC
CCTCGCAGCCAACGATGAGCCACGTGTGGTATTACGGCTGGGTCACCGCT
GTGTCAACGGGGTTTGGAGCTGTGCCGCTGTTGTTTGCTAACGAGCTGGG
CGAGCAGGTACGAAAAAGCCCATGACCGATCGACTAATAGAGCCAGCTTC
GTATTGTGGACATTACGCGCAGCTTGCGCCAGTCACATACAGGGAATCGG
AGTTCCACACAGTTGTTGCCATGTGTGTGCTCTAAGTTGCAGCAAAAACA
GCATAAGCTTGCATGTGCGTGCAGTTGCAAAGAACTTTTCCCGATGAGAA
ACGGCATCAGAAAAGGTCCGGCCTTTCGATCACGTATGATGTCGCGTCAC
ATTAGCAGCGACAAGCAGATTGATTGAGCAGAAGTGCATTTTCACAATCT
TTCATAAAATTAAAGCAATTGGAGCAATCGTACTGCCACTGGCTTATCAC
AAAATCTACTTCAGGTCGCGCACGGCCGACTCAATATGCTGTGGTTTAGT
GCAACCTGCCAGTTCCTGTCGTCACTGCCACCACGGCTCACAGAACATAC
TTGCCAAACATGCGATATTTGATAACGGAAATGATATCTTGAGTATCTTG
AGGTGTAAAGGCCTGTTGCCTGTTGGCAGAGTGTCCTTCTACTGCTGAGC
TCTCGAGTGCATTGATTCAGTACTCTGTGATGGCATGGGACGGTCAGCAA
GCACGGTTTACATGTGCACTTCAAGCACAATGCAAGCTCTGCGTATTCAA
TGTGGAATCCAGCACCCATCGCTACGGCACATGCCATATGCACGCTACCT
GAAACATTCAGAGCTGTCACATGTGGTACGCGAGGACTTGAGAATCGGTG
CTCCCCTTTTTGGTATCATACTGTAACATGCCTCAGCGCTCGCCGCATTC
AAGTGCACTGAACTACCAAGTACACTCTCGCTAACTCCAACCATTGCTGC
TAGTGTAGCTGCCACGCGGAGGATTTGAGGCCCTCATTCCACCAACCATA
GGAAAACTGTCCTTCTTGCTTTTCAACCGCTGCGATTGCAGATGCTGGGG
GTGAGCAATGCCATCGCATGTGGCATGATGCTCAGCGCATCATACTCGCT
GGTCATGGAAGGCGCGGGACTGGAGCCTGACCCGGGGTGCGCGATTCACA
GCGCAGCGTGGCGCGTCGCTGTTGGAGTGCTGGCGGGGCTGGCATTTATT
CTGCCCACGAAGAGGGTGCTGGATAAGTACGAGGTGAGCACTGCCGCATG
GTCACCCCCCTAACTCTAGGTCTGAGTTATTCTGCGCATCAAGAGGGTGC
CGGACAAGGATGAGGTGAGCACTGCTGGCATTGATTGTGCCCACTAACAG
GGTGCTGGATAAGTACGAGGTGAGCACTGCGACAGGGTCTCCTGCCCTGA
CTTTAGGATTACTGTGACCGACGCACGCACAGCTGGGTGACGCTTGTTTT
GATTCAGCATCAGTGGAGGGGTGCTGGCAGACAGAAGGGGCTAATTTGTA
TGCACAAGCTCACAAGTGCGCCGTCGCTTGTGCTGCTGCATCGACTTTGA
CTGTTGGCGGACGACGCTGCCTTGCTGTGCAGCAGCTGCTATTATACTGG
CGTTTACACCGCCAAATAAGGGAATGTTAGTTTTTGTATATAGCTGTGCC
TTTATCAATGGCAGGGCAGCTGCGAACTGAATGACTCACAACTTGCATGG
CAAACAAGTTGTGCAGAGCAGAAGCAGCGATCTACTCTATTGGTTTCTAG
CGCGATTTTCTGTCTCACCCTGGCAAGTTTTGATGAATGAACTGCATGGA
GCATGGGGTGCTTCATATTTCTGACAGCAGGGAGGAAAGTGCATGGCTGC
ACAGTGGGTTAATGCTTGCCGGAGAACGGCCTGGTCACATCGGGCTGTCT
TACAAGCTTCGCGGATGTAGGGCACTTTGTCTGCTGACCATTTAGTGCGT
AGCACCGGTAAACCTATTCTGTGAGAGCAGCCCTCTTTGCCGGCAGCTGA
AATATCACAGTATTATGCTTAGCGCTTGTACTTTTGGACCACACCTCACC
GCTGCAACTACCTTGATGAAGACATCATGGTATCAACTGGTCAAACAGTT
ACATTGGCACGCAGACAAAAATAACATGCATGTATGCGTACTTGATTACA
CAGAAGCCGAACGTGCTCCGTGCTGCAGTTGCAGTCAACAGTTGAAAGTT
CCATGTGCCGCACACACTCTACGCTTGTTGTTGCGTCGGACACACAATCA
CCGTGAGGACATGACACATGCGGATGTCAAGCAGCGCTGCCTTTCCTGAG
CCTTCACAATTGCTCAGCAAAACCATTGGCATTGTTGCTGTGCTGGGCAC
CTCACTGACATTACGATAATGTGAGCTTTCTTGTGCCTCGATCAACAAGC
AGCATCAATCAACATCGACTCCTCTCATGAAGAACATGTCTTACTTGACC
TTCACAGTGCTCAACTTACATTCCCACTTTCTTCAACTTGATGAGCCGTT
CTATCTCTAAACACAGGACACCAACCTGAGCGACCTGACAACCTTTTAAT
CATCTCAGCACTTGCATGTCCACTGGCCCAGCAAGGCCAACACCACTTGT
GCTCCTTGTCCACAACCGCATGCGCCACTGACGCTTGAAGTTGACGCCCC
AACTAAGTTGACGCTCCCCCCCCCCTTTCACGCGCGCAGGACATCCACCT
GGGCGACCTGGCGGGCGCGGACGCCAAAAAGGCGCTGCTCATCGTCTTTG
TCATGTTCCTGCACTCATTCAGCGAGGGCGTGGGCATCGGCGTCAGTTTC
GGCGGCTCCACTGGCGCGCAGCTCGGCTTCCTCATCAGCGCCACGCTCGC
CGTTCACAACGTCCCCGAGGGCCTTGCGGTGGCGCTGGTGCTGCACCCGC
GCGGCGTGAGCAAGCTCAACACGGGCCTCTGGTGCATCTTCACGTCGCTG
CCGCAGCCGCTCATGGCGGTGCTCGCGTACGCATTTGTGGAGCAGTTCCT
GCCTTTCCTGCCTGTGGGGCTGGGGTTCGCCGCGGGCGCCATGTGAGTGC
AGATGTACTTGAAGTTGGCGTGCTTGAAGTTGGCATGCTTGAAGTTGGCG
TGCTTGAAGTTGGCGCCGTGAAACTCGTTGGGCCAGATGTGTGTCTGGGC
GATGCTGTCAGATTGGGTTGAATGAAGGGCCCAGAGACTCTAGGGCCGAT
GCTTAGGTTTGTGCAATTGCCGCATACCAGGACAAAGCATGTGTGCGCAT
GCTTGATGGAGCTGACGTGACTGACGTCATTGTCTACTTCGCACTTTGGC
GTGTGCAATACAACACGCAAGGTTGTACGATACTTGGTGAGCGCCACAGA
ACCAGCAAGCTATCATTGCACAATGGTATGGCCGCTGTTGAGGTAGGGTG
CAAGGCACGTCCAAGGAAGCGGGGAATCACAGAGGATCAGTCCCCCACCT
ACAGTGCAGTCCACAACGCGGGATATGAACGTTTTGCAGGCAGAGGTACC
ACAACCAAGCATCTTGCGTGAAGTCGTTGTGAATGCATCGTAACCCTTAC
TCTAACCCTAACCTAACAACTGTTCAAGGTTGTACACTAGAATTGCAGGC
TTTTGACTCCTGCAATGGGGCCATTTGACACATCTCATTGATCATCCTCC
TGCAATGGGGCCATTCATGGGGGGGTTGTGGTGACTTGACACTCATGGAG
CTGTTGCCGCCTTTCACATAGAGCTTCGAAATCTTTATGGAAACCATCCA
CATTAGTGCCCCAAGCTGCTCTGTTGATTTGTTCTTGTTGCTGCAGAGGC
AAGTTCAGGTAGCATGATGCACTACGCTCACCGTGCCGATCTGCTGCTAT
CGTGCTGTCCAACGTACTTGACTCATTTACTCATGTTGTGCACACCCTGA
TGTCATCATTGAGTCATGTACACGTCAAGTCATTGACTCATCGTCAACCT
GGTTTCATCATTGAGGCATGCACTGACTTCTCAGCAATCTGCTTTCACTC
TTCTCACAGGTTCTGGGTAGCGGTTGCAGAACTCTTTGTGGAGGCGGTGG
AGGCCACGTCGCGCGGTGTCGCGTGCGCCGTCACGCTCTGCGCCTTTGGC
GCCATGCTACACATACACTCGCTGCTGGAGAGTGTTGAGCACTGA
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Coding sequence (CDS) from alignment at Contig_196:222630..226874+

>mRNA_16265 ID=mRNA_16265|Name=jgi.p|Trimin1|179593|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=888bp|location=Sequence derived from alignment at Contig_196:222630..226874+ (Tribonema minus UTEX_B_3156 )
AACGCAAAGCCCGCACACTACAACACCAGCTGGTGGACCGCTGCGCTGTA
CTTTGCAATTTTGCTCGTGTCCAAGTACACGCTGCCGGCCGACCTTCACC
CCTCGCAGCCAACGATGAGCCACGTGTGGTATTACGGCTGGGTCACCGCT
GTGTCAACGGGGTTTGGAGCTGTGCCGCTGTTGTTTGCTAACGAGCTGGG
CGAGCAGATGCTGGGGGTGAGCAATGCCATCGCATGTGGCATGATGCTCA
GCGCATCATACTCGCTGGTCATGGAAGGCGCGGGACTGGAGCCTGACCCG
GGGTGCGCGATTCACAGCGCAGCGTGGCGCGTCGCTGTTGGAGTGCTGGC
GGGGCTGGCATTTATTCTGCCCACGAAGAGGGTGCTGGATAAGTACGAGG
ACATCCACCTGGGCGACCTGGCGGGCGCGGACGCCAAAAAGGCGCTGCTC
ATCGTCTTTGTCATGTTCCTGCACTCATTCAGCGAGGGCGTGGGCATCGG
CGTCAGTTTCGGCGGCTCCACTGGCGCGCAGCTCGGCTTCCTCATCAGCG
CCACGCTCGCCGTTCACAACGTCCCCGAGGGCCTTGCGGTGGCGCTGGTG
CTGCACCCGCGCGGCGTGAGCAAGCTCAACACGGGCCTCTGGTGCATCTT
CACGTCGCTGCCGCAGCCGCTCATGGCGGTGCTCGCGTACGCATTTGTGG
AGCAGTTCCTGCCTTTCCTGCCTGTGGGGCTGGGGTTCGCCGCGGGCGCC
ATGTTCTGGGTAGCGGTTGCAGAACTCTTTGTGGAGGCGGTGGAGGCCAC
GTCGCGCGGTGTCGCGTGCGCCGTCACGCTCTGCGCCTTTGGCGCCATGC
TACACATACACTCGCTGCTGGAGAGTGTTGAGCACTGA
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