mRNA_16262 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|179587 vs. uniprot
Match: A0A836CKD6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKD6_9STRA) HSP 1 Score: 1135 bits (2935), Expect = 0.000e+0 Identity = 623/623 (100.00%), Postives = 623/623 (100.00%), Query Frame = 1 Query: 1 MPGLGFGARTAREEWRAGGVVAVPQINENLGPGTYNIPLDSHIAREKYQGKAPFLTTAVRKFESYAADEDAPAPGTYDVRPVLGKAGSAMPSVFKSGTKRFQRAEAAEAAAVPGPGSYLTPGGIGTGKGGKAGAHKRSSRGGGGPPGKDVTWNRIPSAPSIPVKEQAYGYEEGQHGVLIMQHAAHPGHTGCGDDRPGPLDYRPQLSATKPERRGVPDFSRGPDRLVLLEKAQANASSMPGPGYYNASPGIGADDAATRSTASGRMRPRRRTTAFAXXXXXXXXXXXXASPGPCTYNIPSALSAVLKRAARDQSFLSTSLRFQNARAAEGVPGPGSYRTERPPRSAQRAAARQHARLTRSRSAPVGFQSTSQRFGGGAQCGGGACASDVGPAAYDIPGMTERAARRWEKGGAGGAGAAARAFGSSARRFPVKPEAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXGVPMMPGGARPCALAAGAQHSSAFASTVERFRGGGAAEVGGDEAGVTPSPGQYYVEAEWSGGGKGVVAMAKTRGERFQQPKREGQHLGPGSYDAAHEMTWKGGRRGLLASGEKRFGGASSWMRAGENTPGPGAYNSELLYGNLCKSTHNIAIAEMSGKLM 1869 MPGLGFGARTAREEWRAGGVVAVPQINENLGPGTYNIPLDSHIAREKYQGKAPFLTTAVRKFESYAADEDAPAPGTYDVRPVLGKAGSAMPSVFKSGTKRFQRAEAAEAAAVPGPGSYLTPGGIGTGKGGKAGAHKRSSRGGGGPPGKDVTWNRIPSAPSIPVKEQAYGYEEGQHGVLIMQHAAHPGHTGCGDDRPGPLDYRPQLSATKPERRGVPDFSRGPDRLVLLEKAQANASSMPGPGYYNASPGIGADDAATRSTASGRMRPRRRTTAFAXXXXXXXXXXXXASPGPCTYNIPSALSAVLKRAARDQSFLSTSLRFQNARAAEGVPGPGSYRTERPPRSAQRAAARQHARLTRSRSAPVGFQSTSQRFGGGAQCGGGACASDVGPAAYDIPGMTERAARRWEKGGAGGAGAAARAFGSSARRFPVKPEAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXGVPMMPGGARPCALAAGAQHSSAFASTVERFRGGGAAEVGGDEAGVTPSPGQYYVEAEWSGGGKGVVAMAKTRGERFQQPKREGQHLGPGSYDAAHEMTWKGGRRGLLASGEKRFGGASSWMRAGENTPGPGAYNSELLYGNLCKSTHNIAIAEMSGKLM Sbjct: 1 MPGLGFGARTAREEWRAGGVVAVPQINENLGPGTYNIPLDSHIAREKYQGKAPFLTTAVRKFESYAADEDAPAPGTYDVRPVLGKAGSAMPSVFKSGTKRFQRAEAAEAAAVPGPGSYLTPGGIGTGKGGKAGAHKRSSRGGGGPPGKDVTWNRIPSAPSIPVKEQAYGYEEGQHGVLIMQHAAHPGHTGCGDDRPGPLDYRPQLSATKPERRGVPDFSRGPDRLVLLEKAQANASSMPGPGYYNASPGIGADDAATRSTASGRMRPRRRTTAFAXXXXXXXXXXXXASPGPCTYNIPSALSAVLKRAARDQSFLSTSLRFQNARAAEGVPGPGSYRTERPPRSAQRAAARQHARLTRSRSAPVGFQSTSQRFGGGAQCGGGACASDVGPAAYDIPGMTERAARRWEKGGAGGAGAAARAFGSSARRFPVKPEAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXGVPMMPGGARPCALAAGAQHSSAFASTVERFRGGGAAEVGGDEAGVTPSPGQYYVEAEWSGGGKGVVAMAKTRGERFQQPKREGQHLGPGSYDAAHEMTWKGGRRGLLASGEKRFGGASSWMRAGENTPGPGAYNSELLYGNLCKSTHNIAIAEMSGKLM 623
BLAST of jgi.p|Trimin1|179587 vs. uniprot
Match: D7FYZ3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYZ3_ECTSI) HSP 1 Score: 318 bits (816), Expect = 3.250e-97 Identity = 253/639 (39.59%), Postives = 323/639 (50.55%), Query Frame = 1 Query: 1 MPGLGFGARTAREEWRAGGVVAVPQINENLGPGTYNIPLDSHIAREKYQGKAPFLTTAVRKFESYAADEDAPAPGTYDVRPVLGKAG-SAMPS-VFKSGTKRFQRAEAAEAAA-VPGPGSYLTPGGIGTGKGGKAGAHKRSSRGGGGPPGKDVTWNRIPSAPSIPVKEQAYGYEEGQHGVLIMQHAAHPGHTGCGDDRPGPLDYRPQLSATKPERRGVPDFSRGPDRLVLLEKAQANASSMPGPGYYNASPGIG-ADDAATRSTASGRMRPRRRTTA---FAXXXXXXXXXXXXASPGPCTYNIPSALSAVLKRAARDQSFLSTSLRFQNARAAEG--VPGPGSYRTERPPRSAQRAAARQHARLTRSRS--APVGFQSTSQRFGGGAQCGGGACASDVGPAAYDIPGMTERAARRWEKGGAGGAGAAARAFGSSARRFPVKPEAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXGVPMMPGGAR-PCALAAGAQHSSAFASTVERFRGGGAAEVGGDEAGVTPSPGQYYVEAEWSGGGKGVVAMAKTRGERFQQPK---REGQHLGPGSYDAAH--EMTWKGGRRGLLASGEKRFGGASSWMRAGENTPGPGAYNSELLYGNLCKSTHNIAIAEMSGKL 1866 MP LGF RT R++WRAGG+V + ++GPG+Y++ E G APFL+TA RK A D P PG Y PV +G S PS VF+SGT RF+ + + A PGPG+YL GT G +G K S + W R+P+APSIP +EQ+YGYEEG G L+MQ GH+G GDDRPGP+DY+P++ T+ + DFS+G DRLV L KA+A S+ PGPG+YNA+ G+G DD A R R+R TA + A+PGP Y IPS L RD SFLSTS RF G PGPGSY T P R A+ + R S APVGFQST+ RF G + GG S++GPA+Y + GM E +R+ G G AFGS+ARRFPV G VP+ P G R P AL SAFAS +RF +A G P+PGQY V +GV+ + K RF+ K R G LGPGSYD ++ R+ ++ S + RF S+ N PGPG Y + ++YGNL K T+NIAIAE S + Sbjct: 1 MPDLGFNCRTERDKWRAGGIVHTAPLQVDVGPGSYDVAAGGP-PTEGRPGYAPFLSTAERKLGPDTAAADLPGPGYYSSEPVQHNSGLSGRPSDVFRSGTSRFRPSNGGQGANDTPGPGTYLGHEEFGTRDQGMSGNFKGDS--------DKIKWVRVPTAPSIPGREQSYGYEEGDQGELVMQRPVELGHSGRGDDRPGPVDYQPRVEYTRRCPAAI-DFSKGEDRLVALSKARA--STTPGPGHYNAARGLGDPDDGLDIGRAI--HRKRQRPTASFHYGTKRDRQRKTRDTAAPGPGDYKIPSGLDVRRDPGRRDLSFLSTSRRFDEPATGAGSRAPGPGSYVTA--PSDFDRCRAKDNRVRPRRASFTAPVGFQSTTLRFAGDGRRGG----SEIGPASYSLGGMAEEISRKGS-----GTGRNVGAFGSTARRFPVAG-GGQPHLPRPGAYELGVAGGVDREEGQNTRPSVPVGPSGKRFPSAL-------SAFASATKRFAPPFSANPG-------PAPGQYEVRPLDKP--RGVLPLGKQSKNRFESAKNAVRPG--LGPGSYDVRDVVQLGRARSRKNIMVSSQARFTDPSA---PSSNNPGPGYYGTGMVYGNLLKQTYNIAIAEASADI 592
BLAST of jgi.p|Trimin1|179587 vs. uniprot
Match: A0A7S1DMD9_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DMD9_HEMAN) HSP 1 Score: 110 bits (276), Expect = 2.650e-22 Identity = 147/511 (28.77%), Postives = 195/511 (38.16%), Query Frame = 1 Query: 439 GKDVTWNRIPSAPSIPVKEQAYGYEEGQHGVLIMQHAAHPGHTGCGDDRPGPLDYRPQLSATKPERRGVPDFSRGPDRLVLLEKAQANASSMPGPGYYNASPGIGADDAATRSTASGRMRPRRRTTAFAXXXXXXXXXXXXAS-----PGPCTYNIPSALSAVLKRAARD-QSFLSTSLRFQNARAAEGVPGPGSYRTERPPRSAQRAAARQHARLTRSRSAPVGFQSTSQRFGGGAQCGGGACASDVGPAAYDIPGMTERAA------------RRWEKGGAGGAGAAARAFGSSARRFPVKPEAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXGVPMMPGGAR-----PCALAAGAQ--HSSAFASTVERFRGGGAAEVGGDEAGVTPSPGQYYVEAEWSGGGKGVVAMAKTR----GERFQQPKREGQHLGPGSYDAAHEMTWKGGRRGLLAS-----GEK----RFGGASSWMRAGEN----TPGPGAYNSELLYGNLCKSTHNIAI 1845 GK+V W R P+APSIP++ QAYGYEEG G L+ Q HTG D PGP +Y P ++ T+P +G+ DF R + + A+ PGPG Y A A R R + T+ FA PGP Y+IP + + Q F STS R + A PGPGSY R + Q SR+AP F ST RFG D P +P +R+ + GA FGS A+RF P +GD P +PG A P + + H SAF ST RF E P+PGQYY AEW G K A+T +RF ++ + GPG+Y + E G + + GE+ FG + R G PGPG+Y++ Y L K + NI + Sbjct: 10 GKNVVWFRAPTAPSIPMQNQAYGYEEGTGGQLVKQKPPVETHTGTRGDLPGPGNYDPTIAPTRPNVKGI-DFGRSRAQRSTFKGPGLGAADAPGPGAYEA----------VEPKAPNRQR--KPTSNFASRVLRPHQIERDPDSKVPVPGPGAYSIPDSFVRARQSLPDSLQCFSSTSKRLDDF-ARNRNPGPGSYEDPRTIGTVH-----QKGGPMPSRAAP--FLSTGSRFG------------DKDPTQQVVPXXXXXXXXXXXXXXXXXXKKRFSRAGA---------FGSKAQRFV--PSSGDDDK--------------------------PEVPGPAHYNPKEPKQIQGQLKKGHMSAFVSTSTRFNKQ-------QEEDAKPAPGQYYKTAEWGTGYKPPDHAARTAFFTSSKRFDLASKK-ELPGPGAY--SQETNTLGSQVQTVLKKKALFGEEFSGAAFGTEQRFFRTGNGGRNAAPGPGSYDAIDPYSQLLKRSFNITV 440
BLAST of jgi.p|Trimin1|179587 vs. uniprot
Match: A0A8J2WKT4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WKT4_9STRA) HSP 1 Score: 100 bits (248), Expect = 2.040e-18 Identity = 171/623 (27.45%), Postives = 237/623 (38.04%), Query Frame = 1 Query: 79 NENLGPGTYNIPLDSHIAREKYQGKAPFLTT------AVRKFESYAADEDAPAPGTYDVRPVLGKAGSAMPSVFKSGTKRFQRAEAAEAAAV---PGPGSYLTPGGIGTGKGGKAGAHKRSSRGGGGPPGKDVTWNRIPSAPSIPVKEQAYGYEEGQHGVLIMQHAAHPGHTGCGDDRPGPLDYRPQLSATKPERRGVPDFSRGPDRLVLLEKAQA----NASSMPGPGYYNASPGIGADDAATRSTASGRMRPRRRTTAFAXXXXXXXXXXXXA------SPGPCTYNIPSALSAVLKRAARDQSFLSTSLRFQNARAAEGV--PGPGSYRTERPPRSAQRAAARQHARLTRSRSAPVGFQSTSQRFGGGAQCGGGACASDVGPAAYD-IPGMTERAARRWEKGGAGGAGAAARAFGSSARRFPV-KPEAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXGVPMMPGGARPCALAAGAQHSSAFASTVERFRGGGAAEVGGDEAGVTPSPGQYYVEA-EWSGGGKGVVAMAKTRGERFQQPKREGQHLGPGSYDAAHEMTWKGGRRGLLASGEKRFGGASSWMRAGE--NTPGPGAYNSELLYGNLCKSTHNIAIAEMSGKLM 1869 NE LGPG+YN +Y G T A R F +A D P+P Y V+ + S +P SG R + A + + PGPG+YL KR + PP V+W R+P+APSIP Q++GYEEG G L+ Q G+ G PGP DYRP+ K D +R + N P P Y P + T G+ R ++ AFA SPGP +Y I +A A + F RF N+ + PGPG Y Q A Q TR RS +G T FG G + + GP AY+ G+ + RR + AFG+S RF V K D G P G P Q ++AFAS R G D P+P Y V+ +W+ G AK G ++ + G GPGS++ AH+ + R+ ++ +RFG + + + PGPG Y+ E+ +GNL K T+N+AIAE +L+ Sbjct: 16 NEVLGPGSYN--------PGEYGGFGNAKPTTAGFGHAQRVFSGNSALLDGPSPAEYVVKD--DRMCSNVPIQAASGPMRSKTAGRQDKRRIEDTPGPGAYLR----------MDVDFKRRPQAP--PPPPAVSWERVPTAPSIPGHHQSFGYEEGPDGELVQQMRVDEGYDGTKMSMPGPSDYRPRH--VKGAHVPKADLARTSGHSTFERPVEIVPPFNPYEHPKPTEYVQRPN-------SPGTRDGKPR---KSAAFASGVGRNSIDGDLGAGLKKPSPGPGSYEI-AASDASQAPGRKGTYFSHGGSRFDNSFSGGRYTSPGPGQY-------VGQSNAFEQR---TRRRSRHLGPARTG--FGCGGRTDWTRGSHGAGPGAYEPANGVIDEMRRR--------VSSRTGAFGTSQTRFQVAKERKRDVPDVHGRSVVEIPGHRKRGPSLGLWFRGQPRQMKGPLPKQCR---QCTAAFASGAPR---------GLDYGRDGPAPTAYNVKGIDWNASG-----TAKLHGGGRRKDRDNGVP-GPGSFNLAHDYHIEPNRKRVMVVSAERFGPGGPLYQHPDVPDEPGPGNYDYEMPFGNLLKPTYNVAIAEQCRELV 565
BLAST of jgi.p|Trimin1|179587 vs. uniprot
Match: A0A5B8MBQ7_9CHLO (Uncharacterized protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MBQ7_9CHLO) HSP 1 Score: 92.0 bits (227), Expect = 9.320e-16 Identity = 173/667 (25.94%), Postives = 245/667 (36.73%), Query Frame = 1 Query: 88 LGPGTYNIPLDSHIAREKYQGKAPFLTTAVRKFESYAADEDAPAPGTYD---VRPVLGKAGSAMPSVFKSGTKRFQRAEAAEAAAVPGPGSYLTPGGIGTGKGGKAGAHKRSSRGGGGPPGKDVTWNRIPSAPSIPVKEQAYGYEEGQHGVLIMQHAAHPG--HTGCGDDRPGPLDYRPQLSATKPERRGVPDFSRGPDRLVLLEKAQANASSMPGPGYYNASPGIGADDAA------------------TRSTASGRMRPRRRTTA------FAXXXXXXXXXXXX-ASPGPCTYNIPS-ALSAVLKRAARDQSFLSTSLRFQNARAAEG--------VPGPGSYRTERPPRSAQRAAARQHARLTRSRSAPVGFQSTSQRFGGGAQCGGGACASDVGPAAYDIPGMTERAARRWEKGGAGGAGAAAR-------AFGSSARRFPVKPEAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXGVPMMPGGARPCALAAGAQHSSAFASTVERFR----------------------GGGAAEVGGDEAGVTPSPGQYYVEAEWSGGGK----GVVAMAK-TRGERF---QQPKREGQHLGPGSYDAAHEMTWK-----GGRRGLLASGEKRFGGASSWMRAGENTPGPGAYNSELLYGNLCKSTHNIAI 1845 +GPG+Y I +D + Y APF +TA R SY + P PG Y+ + P + + S+ + F S RF + AA PGPG+Y + K K +H+R S G G V + + +APS+P + Q YGYE G+ G L+ Q A PG +TG D GP DY PQ T R + DFSR + + + + PGPG Y S A + + T++ +G MR ++ A FA A+PGP +Y+ A S+ K + Q+F S + R PGPG+Y RS+ Q L P F S+S RFG + GP AY + + G G G +R AFG S +RF + + M G + +S+FAS V RF+ GG E D TP PG Y W K GV A ++ +RF + K+ GPGSYD ++ K R S RF ++ PGPG Y++E + K + N+ I Sbjct: 26 VGPGSY-INIDKYNTDHGY---APFSSTAERGLNSYEVTDGKPGPGFYEKDVISPSMRRKASS--NAFVSRVSRFAKENAAGTKQTPGPGTYSE-----SNKWLKN-SHQRGSLGLAESGGPQVIFQKQTTAPSVPARNQCYGYEVGEGGDLVRQ--APPGGQYTGHRTDAVGPADYNPQF--TLQHRHRLTDFSRSSTKREIFKPKKT-----PGPGQYQLSEARSAAEQSKGSQDGGASKQALASNVDTQAYHNGAMRRMKKNFAAQESSNFASKVPRMPGEKAENATPGPGSYHSKKHANSSGKKTGSTMQNFGSMAKRPYEVETTTQYAAPTFTTTPGPGAYDVNT--RSSVNIV--QQVSLVE----PAPFASSSIRFGS-------TSSEAPGPGAY------------YSESGEGFVGELSRKIVARNGAFGCSTQRFVSTKSSSSYLYMGNDESPGPGQYIPDAPREMA----IKMQKGQKKA---------TSSFASNVHRFKPNRENAKKSQGSNTKRQGEEASNGGETEHYSDLVHSTPPPGAYSTIDPWDWAKKNPRSGVANKAFISKAKRFTTSENMKQASSDPGPGSYDTGKDILHKKFLGLNKNRSFFVSSATRFNNMTTLA------PGPGTYDTEDPERTMLKRSFNVTI 625
BLAST of jgi.p|Trimin1|179587 vs. uniprot
Match: A0A5A8EFB5_CAFRO (Hypothetical protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EFB5_CAFRO) HSP 1 Score: 83.6 bits (205), Expect = 4.510e-13 Identity = 106/344 (30.81%), Postives = 145/344 (42.15%), Query Frame = 1 Query: 73 QINENLGPGT-YNIPLDSHIAREKYQGKAPFLTTAVRKFESYAADEDAPAPGTYDVR--PVLGKAGSAMPSVFKSGTKRFQRAEAAEAAAVPGPGSYLTPGGIGTGKGGKAGAHKRSSRGGGG----------------PPGKDVTWNRIPSAPSIPVKEQAYGYEEGQHGVLIMQHAAHPGHTGCGDDRPGPLDYRPQLSATKPERRGVPDFSRGPDRLVLLEKAQA-NASSMPGPGYYNASPGIGADDAA----TRSTASGRMRPR-----RRTTAFAXXXXXXXXXXXXAS---PGPCTYNIPSALSAVLKRAA---RDQSFLSTSLRFQNARAAEGVPGP 999 QI PG YN+ + R APF +T R + AA PAPG Y+V+ P+ G++ SA P+ F S +KRF A ++ VPGPG+Y G I A R++ G P + + W R P+APS+P + A+GYEE Q G L++Q A P + PGP Y P R + R DR + A+ A PGPG Y A PG+ A +A T S G + R R+ AF A+ PGP + PSA+S++ + Q F ST+ R A PGP Sbjct: 13 QIRNPDFPGPEYNLQPSIRLVRPS---AAPFGSTGQRSSLARAAG---PAPGQYEVQASPIRGRSFSAKPTPFMSASKRFGGATSS----VPGPGTYSAAGSIRM----HQVARPRTTSAAGXXXXXXXXXXXXXXXXXPEAERLRWRRAPTAPSVPSRHSAFGYEEAQDGTLVLQEA--PPERRPREHGPGPTAYAAHAEWGGPSSRAGTAYGR--DRSTRTDLARPPGAIDTPGPGSY-ALPGLAASASARPGVTVSGPGGAVFDRGVPADARSAAFRSGTAKGEALRNRATDFVPGPGAHYNPSAMSSLRTKRRLPPAQQHFGSTTTRSPLGSTAN-TPGP 336
BLAST of jgi.p|Trimin1|179587 vs. uniprot
Match: A0A699YHE7_HAELA (Uncharacterized protein (Fragment) n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A699YHE7_HAELA) HSP 1 Score: 79.7 bits (195), Expect = 7.080e-13 Identity = 83/258 (32.17%), Postives = 115/258 (44.57%), Query Frame = 1 Query: 1 MPGLGFGARTAREEWRAGGVVAVPQINENLGPGTYNIPLDSHIAREKYQGKAP--FLTTAVRKFESYAADEDA-PAPGTYDVRPV--------LGKAGSAMPSVFKSGTKRFQRAEAAEAAAVPGPGSYLTPGGIGTGKGGKAGAHKRSSRGGGGPPGKD-VTWNRIPSAPSIPVKEQAYGYEEGQHGVLIMQHAAHPGHTGCGDDRPGPLDYRPQLSATKPERRGVPDFSRGPDRLVLLEKAQANASS-MPGPGYYN 735 M GF R+ RE V +++GPG+Y + + A +G AP F+++ R + +A P PG YD + G+ + VF SG R ++ A PGPG+Y + G + K H R+ PP K + ++R SAPSIP ++Q+YGYEEGQ G+LI Q P +TG G D+ GP Y S KP + V V K SS PGPG YN Sbjct: 1 MASGGFHCRSERE------VDVKSTTGKHVGPGSYELAGEPLPASPTGRGPAPAPFMSSLERSWMDVSATHVTNPGPGAYDAHQAKDCATAKHVAPLGNTL--VFASGVDRLHVDKSG--AWQPGPGTY-SEGNVWL----KNTHHYRA------PPSKQRLVFDRTTSAPSIPSRDQSYGYEEGQAGMLIQQKPTEPMYTGVGRDKVGPGSYDVINSGPKPGPKVV-------QWCVSRTKRGLRVSSDTPGPGQYN 230
BLAST of jgi.p|Trimin1|179587 vs. uniprot
Match: A0A1Y1HN23_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HN23_KLENI) HSP 1 Score: 74.7 bits (182), Expect = 2.610e-10 Identity = 168/693 (24.24%), Postives = 258/693 (37.23%), Query Frame = 1 Query: 10 LGFGARTAREEWRAGGVVAVP--QINENLGPGTYNIPLDSHIAREKYQGKAPFLTTA--------------VRKFESYAADEDAPAPGTYDVRPVLGKAGSAMPSV-FKSGTKRFQRAEAAEAAAVPGPGSYLTPGGIGTGKGGKAGAHKRSSRGGGGPPGKDVTWNRIPSAPSIPVKEQAYGYEEGQHGVLIMQHAA-HPGHTGCGDDRPGPLDY--RPQLSATKPERRGVPDFSRGPDRLVLLEKAQANASSMPGPGYYNASPGIGADDAATRSTASGRMRPR------------------------------RRTTAFAXXXXXXXXXXXXA---------SPGPCTYNIPSALSAVLKRAARD-QSFLSTSLRFQNARAAEGVPGPGSYRTERPPRSAQRAAARQHARLTRSRSAPVGFQSTSQRFGGGAQCGGGACASDVGPAAYDIPGMTERAARRWEKGGAGGAGAAARAFGSSARRFPVKPEAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXGVPMMPGG-ARPCALAAGAQHSSAFASTVERFRGGGAAEVGGDEAGVTPSPGQYYVEAEW----SGGGKGVVAMAKTRGE---------RFQQPKREGQHL-GPGSYDAAHEMT-WKGGRRGL----LASGEKRFGGASSWM-RAGENTPGPGAYNSELLYGNLCKSTHNIAI 1845 + F R+ R+ + A+P + +N+GPG+Y P SH + + APF ++ R+ +++E A + + G + + PS F G RF E ++ PGPG+Y G+ K R G + V + R SAPS+P K Q++GY+E + G LIMQ GH+G D PGP +Y RP+ SA FSR ++E + +AS++PGPGYY S ++ S+A P+ R T F A +PGP Y++ SA K+A F ST+ RF+ A P + T PP ++H GF ST+QR G D P E AR + GA AR+ +ARR P + + VP+ GG RP + S F S ++RF +E + +P PG+Y+ + W +G++ + RF +++G + GPG+Y + +KG L L+ E +G + + R TPGPGAY + YG++ K T N+ + Sbjct: 1 MAFTTRSKRD------ISALPATETGKNIGPGSYLSP--SHYSAKP--NLAPFCSSRDRGIAPPTARDSVNTRQINPSSSEELALGARDFSIGSFGGYSHPSRPSSSFAEGVSRF---EDRRRSSTPGPGAY--------GQLSTRDWFKGIPRAQGEGRRRAVVFKRAVSAPSVPAKNQSFGYDEEESGELIMQGPPLQEGHSGISGDLPGPGEYAPRPEPSAK------FTSFSRTVGHQPIVE--ERSASAIPGPGYYERSVDKRSEKRPQTSSAFVSKVPKAHQVAVKEERLTPGPGHYGTLGLQAERSVIRSPTPFGSSERRAYEIDDSALVSAPTIYITPGPGAYDVSSAPRGSSKKALPVIVPFASTAPRFEEFEPATPEPEAVTNSTSSPPEK------KKH------NGKSAGFLSTAQRGLLG-----------------DPPDSGETEARLLDSV----FGALARSARETARRSPKRDKL------------------VLVQYRDNGSKKVPVESGGQGRPGVNEGFRKPGSMFVSKLQRF-----SEP--RQVAESPGPGEYHRDENWVRRNRQNNQGILPPRRASSAEPGFESTVARFASTRKDGVSVPGPGAYYSPSSFVEYKGAMSELHKLALSKRESLWGTSGRFADRTNSWTPGPGAYEARDPYGSVVKKTFNVTL 606
BLAST of jgi.p|Trimin1|179587 vs. uniprot
Match: A0A1R2BNS0_9CILI (Uncharacterized protein n=2 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2BNS0_9CILI) HSP 1 Score: 71.2 bits (173), Expect = 2.740e-9 Identity = 90/318 (28.30%), Postives = 126/318 (39.62%), Query Frame = 1 Query: 88 LGPGTYNIPLDSHIAREKYQGKAPFLTTAVRKFESYAADEDAPAPGTYDVRPVLGKAGSA-------MPSVFKSGTKRFQRAEAAEAAAVPGPGSYLTPGGIGTGKGGKAGAHKRSSRGGGGPPGKDVTWNRIPSAPSIPVKEQAYGYEEGQHGVLIMQHAAHPGHTGCGDDRPGPLDYRPQLSATKPERRGVPDFSRGPDRLVLLEKAQANASSMPGPGYYNASPGIGADDAATRSTASGRMRPRRRTTAFAXXXXXXXXXXXXASPGPCTYNIP--SALSAVLKRAARDQSFLSTSLRFQNARAAEGVPGPGSYRT 1014 +GPG Y SH APF +T+ R F A P PG Y + + S + F S KRF+ + + + PGPG+Y+ K + K++ + V W RIPSAPSIP +QA+GY++G G L+MQ H G ++ GP Y K + RG +S+ V +K GPG Y+ S G M ++ F A PGP +YN S + + K Q+F S+SLRF+ V GPG Y T Sbjct: 19 IGPGAYL----SHNQYSSNPSFAPFTSTSERNFLKQANTSITPGPGCYSIPQSNSDSYSIDNWGHLKTSASFASQLKRFKYEDVSSS---PGPGAYIVQD--------KWKSKKKNPK-----TQTGVNWARIPSAPSIPTHQQAFGYDQGPSGELVMQKNPELVHAGTLNNSVGPGHYNVY---EKKKPRGS-SWSKNKSTRVNSKKPTTGPDI--GPGSYSDS-----------KLDLGPMYKLKQNAVFLSKIKDNSLSESNA-PGPGSYNADKISGFTKIKKVPRSLQNFGSSSLRFKQKFGEYDV-GPGQYTT 297
BLAST of jgi.p|Trimin1|179587 vs. uniprot
Match: A0A6G0WTN4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WTN4_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 3.420e-8 Identity = 123/413 (29.78%), Postives = 172/413 (41.65%), Query Frame = 1 Query: 85 NLGPGTYNIPLDSHIAREKYQGKAPFLTTAVRKFESYAADEDAPAPGTYDV----RPVLGKAGSAMPSVFKSGTKRFQRAEAAEAAAVPGPGSYLTPGGIGTGKGGKAGAHKRSSRGGGGPPGKDVTWNRIPSAPSIPVKEQAYGYEEGQHGVLIMQHAAHPGHTGCGDDRPGPLDYRPQLSATKPERRGVPDFSRGPDRLVLLEKAQANASSMPGPGYYNASPGIGADDAATRSTA--SGRMRPRRRTTAFAXXXXXXXXXXXXASPGPCTYNIPSALSAVLKRAARDQSFLSTSLRFQNARAAEGVPGPGSYRTERPPRSAQRAAARQHARLTRSRSAPVGFQSTSQRFGGGAQCGGGACASDVGPAAYDIPGMTERAARRWEKGGAGGAGAAARAFGSSARRFPV-KPEA 1302 ++GPG+Y+ L S I + K G A F +T V+ + + + P PG Y+ PV+ + S+FKS ++R + + P + K R S PG V W R+P+APSIP+ Q++GYE+G G +++Q T G D GP Y P + +FS+ R A A+ MPGPG YN P I T+ +A + R XXXXXXXXXX P L Q F STS RF+ + A P P E P R + + S+S VGF ST+ RF Q G VGP +Y+ P + + R AG GA FGS+ +RF KP++ Sbjct: 20 SIGPGSYHSNLGS-IQKPK-PGFAAFGSTDVKDAYTKEMNLNTPGPGAYNYSHHSHPVVETS-----SMFKSTSERTKAKTV-----MXXXXXXXXPAATRSAFNAKETTRMRRSESDK-TPGNKVKWVRVPTAPSIPIAAQSFGYEQGPKGQMVLQKPI----TTHGGDALGPGVYDPLKALQNLSSTRAANFSKS--RTTRDNPTVAKAAKMPGPGSYN--PAIEPTPLTTKPSAVFKSSLTRDRAANPITNGXXXXXXXXXXXXXXLTPQRKPEHL----------QFFGSTSSRFEQDKFAPPQPTPA----ETPHR---------YVPIPSSKS-KVGFASTNPRFEKSIQAG-----DVVGPGSYEAPSLVQELQHRL----AGRTGA----FGSTTKRFESPKPQS 374 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|179587 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_16262 ID=mRNA_16262|Name=jgi.p|Trimin1|179587|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1872bp|location=Sequence derived from alignment at Contig_196:202374..204305- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGCCTGGCCTCGGCTTTGGTGCGCGAACAGCCAGGGAAGAATGGCGTGCback to top protein sequence of jgi.p|Trimin1|179587 >Trimin1|179587|e_gw1.196.73.1 ID=Trimin1|179587|e_gw1.196.73.1|Name=jgi.p|Trimin1|179587|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=624bp MPGLGFGARTAREEWRAGGVVAVPQINENLGPGTYNIPLDSHIAREKYQGback to top mRNA from alignment at Contig_196:202374..204305- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_16262 ID=mRNA_16262|Name=jgi.p|Trimin1|179587|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1932bp|location=Sequence derived from alignment at Contig_196:202374..204305- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_196:202374..204305- >mRNA_16262 ID=mRNA_16262|Name=jgi.p|Trimin1|179587|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1872bp|location=Sequence derived from alignment at Contig_196:202374..204305- (Tribonema minus UTEX_B_3156 )back to top |