mRNA_16189 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|353448 vs. uniprot
Match: A0A836CIY2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIY2_9STRA) HSP 1 Score: 831 bits (2147), Expect = 2.380e-304 Identity = 417/417 (100.00%), Postives = 417/417 (100.00%), Query Frame = 1
Query: 1 MQQDKLSACAVDAGRGVVYVTGSTWGDFGTPHYKPGTEGSQLMDYYNDFLAMRMDYATGEIVWSYQDQGGKQDEFVTADIEPAFGDLLVAGTTSTPWGCTDATCPYFAESVVTRPDFVAARLALADGQPRWKWQAGTRGSEVTYAASYSAVTGQYVVAGATASNYAKERVGMGLRDTRAYPYDSDMASTTLTAFAKPVAKWQDGTARGDRITAVAHAPTGEVYLAGDTSGAFADDAVASLGANMVVIKQGADGVELWRHQNAGIVDTRITCAATDADGNVYVGGYARLAATEEDFYVAKLDAATGAVLWEYKAGTAESDIIQGIAVDAAGNIAVAGYTAGKFGAVNKGLYDFVVVGLSPLGVQQWAWQDGTDQSDRLNAIASDTDAGTFVVAGDTYGTYTAPNAGSWDLIVMKLTAA 1251
MQQDKLSACAVDAGRGVVYVTGSTWGDFGTPHYKPGTEGSQLMDYYNDFLAMRMDYATGEIVWSYQDQGGKQDEFVTADIEPAFGDLLVAGTTSTPWGCTDATCPYFAESVVTRPDFVAARLALADGQPRWKWQAGTRGSEVTYAASYSAVTGQYVVAGATASNYAKERVGMGLRDTRAYPYDSDMASTTLTAFAKPVAKWQDGTARGDRITAVAHAPTGEVYLAGDTSGAFADDAVASLGANMVVIKQGADGVELWRHQNAGIVDTRITCAATDADGNVYVGGYARLAATEEDFYVAKLDAATGAVLWEYKAGTAESDIIQGIAVDAAGNIAVAGYTAGKFGAVNKGLYDFVVVGLSPLGVQQWAWQDGTDQSDRLNAIASDTDAGTFVVAGDTYGTYTAPNAGSWDLIVMKLTAA
Sbjct: 1 MQQDKLSACAVDAGRGVVYVTGSTWGDFGTPHYKPGTEGSQLMDYYNDFLAMRMDYATGEIVWSYQDQGGKQDEFVTADIEPAFGDLLVAGTTSTPWGCTDATCPYFAESVVTRPDFVAARLALADGQPRWKWQAGTRGSEVTYAASYSAVTGQYVVAGATASNYAKERVGMGLRDTRAYPYDSDMASTTLTAFAKPVAKWQDGTARGDRITAVAHAPTGEVYLAGDTSGAFADDAVASLGANMVVIKQGADGVELWRHQNAGIVDTRITCAATDADGNVYVGGYARLAATEEDFYVAKLDAATGAVLWEYKAGTAESDIIQGIAVDAAGNIAVAGYTAGKFGAVNKGLYDFVVVGLSPLGVQQWAWQDGTDQSDRLNAIASDTDAGTFVVAGDTYGTYTAPNAGSWDLIVMKLTAA 417
BLAST of jgi.p|Trimin1|353448 vs. uniprot
Match: A0A2D5TXS0_9PROT (Big_5 domain-containing protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2D5TXS0_9PROT) HSP 1 Score: 109 bits (273), Expect = 2.380e-22 Identity = 82/220 (37.27%), Postives = 112/220 (50.91%), Query Frame = 1
Query: 604 QDGTARGDRITAVAHAPTGEVYLAGDTSGAFADDAVASLGANMVVIKQGADGVELWRHQNAGIVDTRITCAATDADGNVYVGGYARLA------ATEEDFYVAKLDAATGAVLWEYKAGTAESDIIQGIAVDAAGNIAVAGYTAGKF-GAVNKGLYDFVVVGLSPLGVQQWAWQDGTDQSDRLNAIASDTDAGTFVVAGDTYGTYTA-PNAGSWDLIVMK 1239
Q GT+ D VA +G VYLAG TSG D S ++ V+K + G + W Q + ATD+ GNVYV GY R + +DF+V K ++ +G W + GT+ SD G+A D++GN VAG T+G G N G D V+ G +QW Q GT SD + +A+D+ +G VAG T G +AGSWDL V+K
Sbjct: 202 QLGTSSHDFAFGVATGSSGNVYLAGYTSGGL-DGNSNSGNRDLFVLKYDSSGTKQWTKQLGTSDYEEASGVATDSSGNVYVAGYTRGGLDGNSNSGNKDFFVIKYNS-SGTKQWTKQLGTSSSDSASGVATDSSGNFYVAGSTSGGLDGNTNSGSSDLFVLKYDSSGTKQWTKQLGTSSSDSASGVATDS-SGNVYVAGSTEGGLDGNSSAGSWDLFVVK 418
BLAST of jgi.p|Trimin1|353448 vs. uniprot
Match: A0A380TGR6_9ZZZZ (Uncharacterized protein n=1 Tax=metagenome TaxID=256318 RepID=A0A380TGR6_9ZZZZ) HSP 1 Score: 101 bits (251), Expect = 9.020e-20 Identity = 98/304 (32.24%), Postives = 134/304 (44.08%), Query Frame = 1
Query: 367 ALADGQPR--WKWQAGTRGSEVTYAASYSAVTGQYVVAGATASNYAKERVGMGLRDTRAYPYDSDMASTTLTAFAKPVAKWQDGTARGDRITAVAHAPTGEVYLAGDTSG--AFADDAVASLGAN------MVVIKQGADGVELWRHQ-NAGIVDTRITCAATDADGNVYVGGYARLAATEE----DFYVAKLDAATGAVLWEYKAGTAESDIIQGIAVDAAGNIAVAGYTAGKFGAVNKGLYDFVVVGLSPLGVQQWAWQDGTDQSDRLNAIASDTDAGTFVVAGDTYGTYTAPNAGSWDLIV 1233
A AD P WK + G G + A + AV G +VAG T +A G D+ P+ W+ A G GE +LA D+ G A A D S+G + V+ DG WRHQ +D AA+DA G+V + G+ E+ D V K AA GA W ++ GT D I G+A+DAAGN+ VAG T G +G D +V +P G + W Q G+ +DRL +A D ++ +VAGDT G P+ G WD+ V
Sbjct: 44 AHADPAPALLWKHRVGGTGFDYATAVATDAV-GNVIVAGPTNGPFAGPNKG-----------GVDIFIAAFAGSGTPL--WKRKLASGKS--------EGEAHLAIDSDGNLAVASDTEGSIGQSNRGRYDAFVVSYAPDGTVRWRHQPGTRRLDVLTAVAASDA-GHVVIAGWTEGRLAEKKGGTDGLVIKY-AANGAEQWRHQLGTTGDDEIAGVAIDAAGNVVVAGNTDGSLVGTGEGNTDGFIVRYAPNGTELWRTQFGSGLTDRLRRVAID-ESRNIIVAGDTSGDIGGPSNGEWDVFV 322
BLAST of jgi.p|Trimin1|353448 vs. uniprot
Match: A0A3A0DUK6_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3A0DUK6_9BACT) HSP 1 Score: 102 bits (255), Expect = 1.170e-19 Identity = 125/416 (30.05%), Postives = 174/416 (41.83%), Query Frame = 1
Query: 22 ACAVDAGRGVVYVTGSTWGDFGTPHYKPGTEGSQLMDYYNDFLAMRMDYATGEIVWSYQDQGGKQDEFVTADIEPAFGDLLVAGTTSTPWGCTDATCPYFAESVVTRPDFVAARLALADGQPRWKWQAGTRGSEVTYAASYSAVTGQYVVAGATASNYAKERVGMGLRDTRAY--PYDSDMASTTLTAFAKPVAKWQDGTARGDRITAVAHAPTGEVYLAGDTSGAFADDAVASLGANMVVIKQGADGVELWRHQNAGIVDTRITCAATDADGNVYVGGYAR--LAATEE---DFYVAKLDAATGAVLWEYKAGTAESDIIQGIAVDAAGNIAVAGYTAGKFGAVNKGLYDFVVVGLSPLGVQQWAWQDGTDQSDRLNAIASDTDAGTFVVAGDTYGTYTAPNAGSWDLIVMKLTA 1248
A A+DA G Y G T GD + GS ND + ++D A G +W+ Q G + + A G++ V+G T G +A + D ++ ADGQ W Q G+ +V + A Y+V G + G L T Y YD+D + T T D +VA G VY G T+G A +L A V + +G +W Q D DA+GNVY G LA DF+V K D G +LW + GT+ +D +G+AVDA GN+ VAG+TAG FG N G+ D + G +Q Q GT SD A D AG +A + G+ A +AG WD++ KL+A
Sbjct: 1507 AMAIDAA-GNSYFAGYTQGDLVVANL-----GS------NDVILGKIDPA-GNRLWTIQ-FGTPEGDVARGVAVDADGNVFVSGDTIGSLGGPNA----------GQTDAFLSKYT-ADGQLIWSQQLGSPALDVNRGLALDADGNAYIVGGTNG-----DLGGTNLAGTDGYIAKYDTD-GNLLWTRILGT-------TGDNDSFLSVAVDAAGNVYGGGVTNGDLAAQNAGALDA--FVARYDREGNRVWTRQLGTSADEIGHNVRLDANGNVYTTGTTSGSLAGPNRGGSDFHVHKFDP-QGTLLWAVQDGTSAADQQRGLAVDAEGNVIVAGFTAGNFGRPNLGVNDLFLARYDTAGTRQSVLQFGTQASDLPWGAAVDA-AGNVYLAAISQGSLAANHAGGWDVVFAKLSA 1880
BLAST of jgi.p|Trimin1|353448 vs. uniprot
Match: A0A7D5RZM5_9PROT (SBBP repeat-containing protein n=1 Tax=Defluviicoccus sp. TaxID=2682137 RepID=A0A7D5RZM5_9PROT) HSP 1 Score: 98.6 bits (244), Expect = 9.930e-19 Identity = 91/297 (30.64%), Postives = 127/297 (42.76%), Query Frame = 1
Query: 376 DGQPRWKWQAGTRGSEVTYAASYSAVTGQYVVAGATASNYAKERVGMGLRDTRAYPYDSDMASTTLTAFAKPVAKWQDGTARGDRITAVAHAPTGEVYLAGDTSGAFADDAVASLGANMVVIKQGADGVELW-RHQNAGIVDTRITCAATDADGNVYVGGYARLAAT-----EEDFYVAKLDAATGAVLWEYKAGTAESDIIQGIAVDAAGNIAVAGYTAGKFGAVNKGLYDFVVVGLSPLGVQQWAWQDGTDQSDRLNAIASDTDAGTFVVAGDTYGTYTAPNAGSWDLIVMKLTA 1248
DG+ W+ Q GT +V YA + V G + G T + G D +D D + + K Q GTAR + VA G VYL G T G + SL ++ +IK +G LW RH + D + DADGNVY+ G A D ++ K D G +LW+ + GT D + GIA D +GN+ V G T G G + G D V+ G W Q GT D + A+ D ++V G T G + G+ D V++L A
Sbjct: 83 DGKELWRRQPGTTEGDVPYAIATD-VNGNVYITGVTTGSLGGAY--KGFNDAFLIKFDRD---------GRILWKRQPGTARSEWGKGVATDADGNVYLVGYTDGPLGGASKGSL--DVFMIKFDRNGRILWKRHMGTSLRD-EASAVVADADGNVYLAGQTSGALAGPNRGSYDTFIVKFDGG-GRILWKRQLGTKAFDTVTGIATDTSGNVYVVGRTDGALGGASAGGADAFVIKFGSTGDVLWKRQLGTAGYDAAHGTATGADGSVYIV-GQTLGALGGSSLGNVDGFVIQLDA 362
BLAST of jgi.p|Trimin1|353448 vs. uniprot
Match: A0A1Q9F4G3_SYMMI (Calmodulin n=2 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9F4G3_SYMMI) HSP 1 Score: 97.1 bits (240), Expect = 8.520e-18 Identity = 63/175 (36.00%), Postives = 95/175 (54.29%), Query Frame = 1
Query: 751 ADGVELWRHQNAGIVDTRITCAATDADGNVYVGGYARLA------ATEEDFYVAKLDAATGAVLWEYKAGTAESDIIQGIAVDAAGNIAVAGYTAGKF-GAVNKGLYDFVVVGLSPLGVQQWAWQDGTDQSDRLNAIASDTDAGTFVVAGDTYGTYTA-PNAGSWDLIVMKLTAA 1251
++G W Q D R+ A D+ G++ V G + + A + DF V KL A G + W ++ GT +D + VD++GNI +AG++ G F G N G YD VV+ LS G QW +Q GT D L A+ ++ +G V AG + G++ NAG WD++VMKL ++
Sbjct: 751 SEGTFEWIFQRGTSQDDRLLAAQVDSSGDIVVAGRSSGSFEGYTNAGDWDFVVMKLSGA-GTLQWIFQTGTTGTDYAEAAHVDSSGNIVLAGHSTGSFEGHANAGDYDMVVIKLSNSGTLQWIFQTGTSAVDNLRAVQVES-SGNVVAAGHSTGSFEGYTNAGVWDVVVMKLNSS 923
BLAST of jgi.p|Trimin1|353448 vs. uniprot
Match: A0A532TTN2_9EURY (Uncharacterized protein n=1 Tax=Hadesarchaea archaeon B3_Hades TaxID=2012484 RepID=A0A532TTN2_9EURY) HSP 1 Score: 92.0 bits (227), Expect = 2.840e-17 Identity = 74/220 (33.64%), Postives = 106/220 (48.18%), Query Frame = 1
Query: 604 QDGTARGDRITAVAHAPTGEVYLAGDTSGAFADDAVASLGANMVVIKQGADGVELWRHQNAGIVDTRITCAATDADGNVYVGGYA------RLAATEEDFYVAKLDAATGAVLWEYKAGTAESDIIQGIAVDAAGNIAVAGYTAGKF-GAVNKGLYDFVVVGLSPLGVQQWAWQDGTDQSDRLNAIASDTDAGTFVVAGDTYGTYTAP-NAGSWDLIVMK 1239
Q GT D T + +G VY+AG+T GA ++ +S G+++ V K G ELW Q + T A DA GNVY GY + ++ +D ++ K D G LW + GT+ D + +AVDA+GN+ VAG T+G G + G D V G + W Q GT D +A DT +V AG TYG ++G D ++K
Sbjct: 41 QFGTPANDYATDIVVDASGNVYVAGETVGALPGES-SSGGSDVFVRKYDGSGSELWTRQFGTSANDHATDVAVDASGNVYAAGYTGGALPGQSSSGSDDAFIRKYDG-EGNELWTKQFGTSTYDYAESVAVDASGNVYVAGLTSGALPGESSSGGGDAFVRKYDGEGNELWTKQFGTSTYDEAYDVAVDTFDNVYV-AGQTYGALPGQTSSGDGDAFLVK 257
BLAST of jgi.p|Trimin1|353448 vs. uniprot
Match: A0A1Q7E7G1_9BACT (Uncharacterized protein n=1 Tax=Gemmatimonadetes bacterium 13_1_40CM_66_11 TaxID=1805195 RepID=A0A1Q7E7G1_9BACT) HSP 1 Score: 94.4 bits (233), Expect = 3.440e-17 Identity = 85/268 (31.72%), Postives = 111/268 (41.42%), Query Frame = 1
Query: 457 GQYVVAGATASNYAKERVGMGLRDTRAYPYDSDMASTTLTAFAKPVAKWQDGTARGDRITAVAHAPTGEVYLAGDTSGAFADDAVASLGANMVVIKQGADGVELWRHQ--NAGIVDTRITCAATDADGNVYVGGYAR--LAATEE---DFYVAKLDAATGAVLWEYKAGTAESDIIQGIAVDAAGNIAVAGYTAGKFGAVNKGLYDFVVVGLSPLGVQQWAWQDGTDQSDRLNAIASDTDAGTFVVAGDTYGTYTAPNAGSWDLIVMK 1239
G VAG T + + G D YD+ L F + W G A G V++AG T GA + S A+ + K G +LW Q + I D A D GNVYV G L + D ++AK D TG LW + GT +D+ +AVDA GN+ +AGYT G G N+G D + G Q W Q GT D +N +A D+ G VAG T G N G D + K
Sbjct: 196 GNVYVAGVTQGSLSG--TNQGSYDAFLAKYDASDTQLWLKQFGTSFSDWPFGMATDAE---------GNVFVAGTTEGALPSRPIQSF-AHAFLAKYDGAGAQLWVQQLDTSSIKDA--LGVAVDVGGNVYVAGSTNGNLGGPNQFLTDAFLAKFDR-TGTQLWVKQLGTGSTDVASSVAVDAVGNVYLAGYTFGSLGGPNQGEADVFLARYDRSGTQLWVEQFGTTSFDEINGVAVDS-GGQIYVAGVTEGALGDANQGFADAFLAK 447
BLAST of jgi.p|Trimin1|353448 vs. uniprot
Match: A0A7D5S3X0_9PROT (SBBP repeat-containing protein n=1 Tax=Defluviicoccus sp. TaxID=2682137 RepID=A0A7D5S3X0_9PROT) HSP 1 Score: 92.8 bits (229), Expect = 6.250e-17 Identity = 95/296 (32.09%), Postives = 130/296 (43.92%), Query Frame = 1
Query: 376 DGQPRWKWQAGTRGSEVTYAASYSAVTGQYVVAGATASNYAKERVGMGLRDTRAYPYDSDMASTTLTAFAKPVAKWQDGTARGDRITAVAHAPTGEVYLAGDTSGAFADDAVASLG-ANMVVIKQGADGVELW-RHQNAGIVDTRITCAATDADGNVYVGGYAR--LAATEE---DFYVAKLDAATGAVLWEYKAGTAESDIIQGIAVDAAGNIAVAGYTAGKFGAVNKGLYDFVVVGLSPLGVQQWAWQDGTDQSDRLNAIASDTDAGTFVVAGDTYGTYTAPNAGSWDLIVMKL 1242
DG+ W+ Q GT S+ +A + V G + G T+ + GL D +D + + + K Q GTA+ D VA G V+L GDT GA A+ G ++ +IK +G LW RH D A DADGNVY+ G LA T D Y+ K D +G +LW+ + GT D + GIA D GN+ VAG T G G + G D V+ G W Q GT + A D G ++V G T G G+ D V++L
Sbjct: 79 DGKELWRRQPGTTESDTPFAITTD-VDGNVYITGVTSGSLGG--ANKGLVDAFLIKFDRN---------GRILWKRQPGTAKYDXGKRVATDANGNVFLVGDTEGALGG---ANKGLVDVFMIKFDRNGRILWNRHMGTSQRDEARAVVA-DADGNVYLAGQTTGALAGTNRGYYDAYIVKFDG-SGRILWKRQLGTTAFDGVDGIAADTDGNVYVAGTTNGALGGASAGGVDAFVIKFESTGDILWKRQLGTAAYETALDAAIGADGGVYIV-GYTIGALGGSPHGNTDGFVIQL 356
BLAST of jgi.p|Trimin1|353448 vs. uniprot
Match: A0A4Q5ZZ59_9DELT (Uncharacterized protein n=1 Tax=Myxococcaceae bacterium TaxID=2484252 RepID=A0A4Q5ZZ59_9DELT) HSP 1 Score: 90.9 bits (224), Expect = 7.050e-16 Identity = 119/418 (28.47%), Postives = 167/418 (39.95%), Query Frame = 1
Query: 10 DKLSACAVDAGRGVVYVTGSTWGDFGTPHYKPGTEGSQLMDYYNDFLAMRMDYATGEIVWSYQDQGGKQDEFVTADIEPAFGDLLVAGTTSTPWGCTDATCPYFAESVVTRPDFVAARLALADGQPRWKWQAGTRGSEVTYAASYSAVTGQ--YVVAGATASNYAKERVGMGLRDTRAYPYDSDMASTTLTAFAKPVAKWQDGTARGDRITAVAHAPTGEVYLAGDTSGAFADDAVASLGANMVVIKQGADGVELWRHQNAGIVDTRITCAATDADGNVYVGGYARLAATEE-----DFYVAKLDAATGAVLWEYKAGTAESDIIQGIAVDAAGNIAVAGYTAGKFGAVNKGLYDFVVVGLSPLGVQQWAWQDGTDQSDRLNAIASDTDAGTFVVAGDTYGTYTAPNA-GSWDLIVMK 1239
D S+ AG +Y G T+ FG + G G + Y+ ATG + W Q G DE V G + VAG TS G A F +++V + D RL W WQ G+ E +A +A+ G YVV G S G G +SD + + A V Q GT D AV +G+VY+AG TSG+ ++V++K A G LW Q + + G + GG + + DF+ A TG L ++ G+A + + D AG +AG T G GAV G D V+V L+P G Q Q GT + IA D G VAG+T G + A G++D ++K
Sbjct: 486 DHASSAVATAGG--IYAAGETYSSFGGNSHLGG--GDLFLTAYD---------ATGGLRWVRQ-FGSADDELVGGLSADVAGSVYVAGGTSGSLG-GHAPAGLF-DALVVKYDSAGQRL--------WAWQLGS--PEFEFARGVAALPGGGVYVVGGTYGSLDGNVSAGYG---------ESDFFVSRVDAGGARVWTRQLGTPGYDEAVAVTVGASGDVYVAGVTSGSMGSGGPQG-DTDVVLVKFDAAGQLLWSRQVGSSAPDSVVGVIETSAGILVSGGASGAGGGQPSQGGVDFFAALFAPMTGQPLGWWQFGSALDEYPGALVSDGAGGAWLAGSTQGVMGAVRGG-QDIVLVHLTPQGEPQLVRQLGTQDDEHAEGIAVDA-LGRVYVAGETLGAFEGQTASGAFDFFLLK 865
BLAST of jgi.p|Trimin1|353448 vs. uniprot
Match: A0A836CL24_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL24_9STRA) HSP 1 Score: 1664 bits (4310), Expect = 0.000e+0 Identity = 960/960 (100.00%), Postives = 960/960 (100.00%), Query Frame = 1
Query: 1 MVAPPGCTTGLPAFDLRAANPDHEVKEDLQGVRNAMENWVSSSMAPEGHSKRHLVHMISEGTTLPAVLADFWHAVGSCVDKQRLAPEDRSFRRLHILTAPFCEPLRSYKTMAILDRLLERAAAEGGCQHFMPATDHDGVTVYHNHPRFRNTPPPTVKAYAVRHSPYPSFSLAAHYKAGGGAQARWPLPPAGQEPPLDSMMQQPLRRLAPRPMQPDRSATAGSNSAXXXXXXXXGTPQRSKPEGRRGKKQAPRPDKEWAPRVRVALESAYAKAAVSASDDKVEPRGAAPATSVAVLQATMEWVARVLQEAEDVKETSGYEGTSVSRQLRGAHAHQSALRPDDDACSPPPAHPVRSLARCLQNRGLVSSTVVRRMRSVAAYSVTRSATAEDLFADVWDAVVELTQRAAEAGCAVPQEHEATLDDAGRPPCYSAVVVAPEFDAYCSEGFRRFGEILRSTLDYLPMEDNITIEVFHPEFVTGHDKERDRSAMRRSPWPAIHICFEGARVPDVQESAQRHFTLEVVDELSKIPSAARSCLDSVAAVASPTRLAGDRDAFLHITYQSTDTFYKDEGGRQAHIQEILTTVPVLSQHLETDNNGEVTVRFRIEEVSKNHRSQRFVVMITADTARMRDLPQIEPIKTAPIMVLSKRKDRKRRAEQAGLTWAPTPQAPPAAAAMTAAMQAQQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARRGSLGAAGFALLPQAHLLPNAAAAAXXXXXXXXXLMSAAPALALKREASAQHPEGPYTAADLGPLGARAYQMLSDAEQWHMVGVGVNPETGTPDANNPIVKCHVCEAVCIGLVHMHREGCRLRRLLDDCMSVLEAAVPEGGNTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVVQQALPVPTLPGSHPAWMNDARGGSXXXXXXXXXXXXXXXXXXXRQHGEFSPASGIHAILHAAAD 2880
MVAPPGCTTGLPAFDLRAANPDHEVKEDLQGVRNAMENWVSSSMAPEGHSKRHLVHMISEGTTLPAVLADFWHAVGSCVDKQRLAPEDRSFRRLHILTAPFCEPLRSYKTMAILDRLLERAAAEGGCQHFMPATDHDGVTVYHNHPRFRNTPPPTVKAYAVRHSPYPSFSLAAHYKAGGGAQARWPLPPAGQEPPLDSMMQQPLRRLAPRPMQPDRSATAGSNSAXXXXXXXXGTPQRSKPEGRRGKKQAPRPDKEWAPRVRVALESAYAKAAVSASDDKVEPRGAAPATSVAVLQATMEWVARVLQEAEDVKETSGYEGTSVSRQLRGAHAHQSALRPDDDACSPPPAHPVRSLARCLQNRGLVSSTVVRRMRSVAAYSVTRSATAEDLFADVWDAVVELTQRAAEAGCAVPQEHEATLDDAGRPPCYSAVVVAPEFDAYCSEGFRRFGEILRSTLDYLPMEDNITIEVFHPEFVTGHDKERDRSAMRRSPWPAIHICFEGARVPDVQESAQRHFTLEVVDELSKIPSAARSCLDSVAAVASPTRLAGDRDAFLHITYQSTDTFYKDEGGRQAHIQEILTTVPVLSQHLETDNNGEVTVRFRIEEVSKNHRSQRFVVMITADTARMRDLPQIEPIKTAPIMVLSKRKDRKRRAEQAGLTWAPTPQAPPAAAAMTAAMQAQQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARRGSLGAAGFALLPQAHLLPNAAAAAXXXXXXXXXLMSAAPALALKREASAQHPEGPYTAADLGPLGARAYQMLSDAEQWHMVGVGVNPETGTPDANNPIVKCHVCEAVCIGLVHMHREGCRLRRLLDDCMSVLEAAVPEGGNTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVVQQALPVPTLPGSHPAWMNDARGGSXXXXXXXXXXXXXXXXXXXRQHGEFSPASGIHAILHAAAD
Sbjct: 1 MVAPPGCTTGLPAFDLRAANPDHEVKEDLQGVRNAMENWVSSSMAPEGHSKRHLVHMISEGTTLPAVLADFWHAVGSCVDKQRLAPEDRSFRRLHILTAPFCEPLRSYKTMAILDRLLERAAAEGGCQHFMPATDHDGVTVYHNHPRFRNTPPPTVKAYAVRHSPYPSFSLAAHYKAGGGAQARWPLPPAGQEPPLDSMMQQPLRRLAPRPMQPDRSATAGSNSAXXXXXXXXGTPQRSKPEGRRGKKQAPRPDKEWAPRVRVALESAYAKAAVSASDDKVEPRGAAPATSVAVLQATMEWVARVLQEAEDVKETSGYEGTSVSRQLRGAHAHQSALRPDDDACSPPPAHPVRSLARCLQNRGLVSSTVVRRMRSVAAYSVTRSATAEDLFADVWDAVVELTQRAAEAGCAVPQEHEATLDDAGRPPCYSAVVVAPEFDAYCSEGFRRFGEILRSTLDYLPMEDNITIEVFHPEFVTGHDKERDRSAMRRSPWPAIHICFEGARVPDVQESAQRHFTLEVVDELSKIPSAARSCLDSVAAVASPTRLAGDRDAFLHITYQSTDTFYKDEGGRQAHIQEILTTVPVLSQHLETDNNGEVTVRFRIEEVSKNHRSQRFVVMITADTARMRDLPQIEPIKTAPIMVLSKRKDRKRRAEQAGLTWAPTPQAPPAAAAMTAAMQAQQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARRGSLGAAGFALLPQAHLLPNAAAAAXXXXXXXXXLMSAAPALALKREASAQHPEGPYTAADLGPLGARAYQMLSDAEQWHMVGVGVNPETGTPDANNPIVKCHVCEAVCIGLVHMHREGCRLRRLLDDCMSVLEAAVPEGGNTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVVQQALPVPTLPGSHPAWMNDARGGSXXXXXXXXXXXXXXXXXXXRQHGEFSPASGIHAILHAAAD 960
BLAST of jgi.p|Trimin1|353448 vs. uniprot
Match: D7FTV7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTV7_ECTSI) HSP 1 Score: 135 bits (341), Expect = 9.460e-29 Identity = 102/313 (32.59%), Postives = 149/313 (47.60%), Query Frame = 1
Query: 46 LRAANPDHEVKEDLQGVRNAMENWVSSSMAPEGHSKRHLVHMISEGTTLPAVLADFWHAVGSCVDKQRLAPEDRSFRRLHILTAPFCEPLRSYKTMAILDRLLERAAAEGGCQHFMPATDHDGVTVYHNHPRFRNTPPPTVKAYAVRHSPYPSFSLAAHYKAGGGAQARWPLPPAGQEPPLDSMMQQPLRRLAP-RPMQPDRSATAG----SNSAXXXXXXXXGTPQ-RSKPEGRRGKKQAPRPDKEWAPRVRVALESAYAKAAVSASDDKVEPRGAA-------------PATSVAVLQATMEWVARVLQEA 927
L ++ PD +D + + M W + + HS R+ +++SEGT+LP V DFW AV +D+ R PE+RSFR++ + APFCE LR Y+TM +LL+++A +GGCQ F H H HP +R+ P P A RHSP+P+FS+ Y+ GG L+ LA R + A G S A +P+ R K E R +Q +EWA + R +LE AY AA ++ G++ P +SV +LQAT EW+ VL++A
Sbjct: 46 LASSKPD---VKDTTSIISEMNEWTKV-VTFDTHSSRNTKYIVSEGTSLPEVFFDFWKAVSGAIDQHRATPENRSFRKVLMFVAPFCEELRDYETMEHAHQLLQQSACDGGCQDFGTYITHS-----HYHPNYRHRPKPKQSRMASRHSPHPAFSIDVVYRKGG------------------------LKSLASIRDSSEEAEARQGTRVKSTPARTAPLRADPSPEDRKKSEIARKIRQ-----EEWAAKTRSSLEHAYGMAASYGREEAEHGVGSSMWAHQHVLAGRGVPESSVEILQATQEWLTEVLKDA 320
BLAST of jgi.p|Trimin1|353448 vs. uniprot
Match: A0A6H5KUH9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUH9_9PHAE) HSP 1 Score: 126 bits (317), Expect = 5.150e-28 Identity = 65/164 (39.63%), Postives = 97/164 (59.15%), Query Frame = 1
Query: 46 LRAANPDHEVKEDLQGVRNAMENWVSSSMAPEGHSKRHLVHMISEGTTLPAVLADFWHAVGSCVDKQRLAPEDRSFRRLHILTAPFCEPLRSYKTMAILDRLLERAAAEGGCQHFMPATDHDGVTVYHNHPRFRNTPPPTVKAYAVRHSPYPSFSLAAHYKAGG 537
L ++ PD +D + + M+ W + + +S R+ +++SEGT+LP VL DFW AV +D+ R PE+RSFR++ + APFCE LR Y+TM +LL+++A +GGCQ F H H HP +R+ P P A RHSP+P+FS+ Y+ GG
Sbjct: 46 LASSKPD---VKDTTNIISEMKEWTKV-VTFDTYSSRNTKYIVSEGTSLPEVLFDFWKAVSGAIDQHRATPENRSFRKVLMFVAPFCEELRDYETMEHTHQLLQQSACDGGCQDFGTYITHS-----HFHPNYRHRPKPKQSRMASRHSPHPAFSIDVVYRKGG 200
BLAST of jgi.p|Trimin1|353448 vs. uniprot
Match: A0A6H5KW26_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW26_9PHAE) HSP 1 Score: 109 bits (273), Expect = 8.560e-22 Identity = 60/144 (41.67%), Postives = 86/144 (59.72%), Query Frame = 1
Query: 1090 LVSSTVVRRMRSVAAYSVTRSATAEDLFADVWDAVVELTQRAAEAGCAVPQEHEATLDDAGRPPCYSAVVVAPEFDAYCSEGFRRFG---EILRSTLDYLPMEDNITIEVFHPEFVTGHDKERDRSAMRRSPWPAIHICFEGAR 1512
L +V+RM++++ Y VTRS TAE+ ++D W+ V+E+ RAA GC VP E + T A PCY A++V P+ Y S+ F RF E L L +LPME +I++E FHPE V+ R RSP+P +H+C+ G R
Sbjct: 163 LPGKELVKRMKNISQYIVTRSKTAEEAYSDTWEVVMEMADRAASRGCDVPTE-DYTSSSA---PCYGALLVTPDIATYSSDTFLRFQAKVETLNRGLKHLPMEHDISVEAFHPEAVSDASPLDHR--FTRSPYPTLHVCYHGLR 300
BLAST of jgi.p|Trimin1|353448 vs. uniprot
Match: A0A836CPW2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPW2_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 1.010e-9 Identity = 44/98 (44.90%), Postives = 51/98 (52.04%), Query Frame = 1
Query: 1642 AGDRDAFLHITYQSTDTFYKDEGGRQAHIQ---------------------------------EILTTVPVLSQHLETDNNGEVTVRFRIEEVSKNHR 1836
A + +L + QSTDTFYKDEGGRQAHIQ EIL T+ ++QHLETDN G +RFRIEEVSKNHR
Sbjct: 542 AAEEVLYLQVVDQSTDTFYKDEGGRQAHIQVDVKITNPKGLDLSRIPLVLQLHYENGYAVQNQEILATI--MAQHLETDNRGGAVIRFRIEEVSKNHR 637
BLAST of jgi.p|Trimin1|353448 vs. uniprot
Match: D8LJ34_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ34_ECTSI) HSP 1 Score: 65.9 bits (159), Expect = 5.160e-7 Identity = 36/88 (40.91%), Postives = 52/88 (59.09%), Query Frame = 1
Query: 1705 EGGRQAHIQEILTTVPVLSQHLETDNNGEVTVRFRIEEVSKNHRSQRFVVMITADTARMRDLPQIEPIKTAPIMVLSKRKDRKRRAEQ 1968
E G + H QEIL L T+ +G ++F+I EVS+ H+SQRF V I D + + P+ T P+MVLSKRK+R+ +AE+
Sbjct: 213 EAGTEVHSQEILQVQS--DTQLVTNEHGRANLKFKITEVSQRHQSQRFCVKICPDVRLAPEFSNVAPVVTVPVMVLSKRKNRRLKAEK 298
BLAST of jgi.p|Trimin1|353448 vs. uniprot
Match: A0A7S2Y042_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y042_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 1.670e-5 Identity = 40/164 (24.39%), Postives = 83/164 (50.61%), Query Frame = 1
Query: 1105 VVRRMRSVAAYSVTRSATAEDLFADVWDAVVELTQRAAEAGC------------AVPQEH---EATLDDAGR-PPCYSAVVVAPEFDAYCSEGFRRFGEILRSTLDYLPMEDNITIEVFHPEFVTGHDKERDRSAM-RRSPWPAIHICFEGARV-PDVQESAQR 1542
++ + +++ + V+ + AE + ++ W AV +L + A C +V H E ++D+ PC S + P F+ + + F++F L++ ++ +P E+++ IE+FHPE H + R + RR+P+P +H+ G + P + E++ R
Sbjct: 205 LLTNLDTISQFIVSSAEGAESVLSEFWQAVDDLNKNAISQSCPPERNLPNQVISSVIASHDLDEDVVEDSHLYRPCVSTLFSTPYFNNFNAVAFQKFARCLKTAVNNIPCEEDVHIEIFHPE----HVARKGRIIVNRRAPYPTLHLYHNGLKTAPTLHETSTR 364 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353448 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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BLAST of jgi.p|Trimin1|353448 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_16189 ID=mRNA_16189|Name=jgi.p|Trimin1|353448|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1254bp|location=Sequence derived from alignment at Contig_163:227160..234019+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGCAGCAAGATAAGCTGAGCGCATGTGCCGTCGATGCTGGCAGAGGCGTback to top protein sequence of jgi.p|Trimin1|353448 >Trimin1|353448|estExt_Genemark1.C_Ctg_1630027 ID=Trimin1|353448|estExt_Genemark1.C_Ctg_1630027|Name=jgi.p|Trimin1|353448|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=418bp MQQDKLSACAVDAGRGVVYVTGSTWGDFGTPHYKPGTEGSQLMDYYNDFLback to top mRNA from alignment at Contig_163:227160..234019+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_16189 ID=mRNA_16189|Name=jgi.p|Trimin1|353448|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6860bp|location=Sequence derived from alignment at Contig_163:227160..234019+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_163:227160..234019+ >mRNA_16189 ID=mRNA_16189|Name=jgi.p|Trimin1|353448|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1254bp|location=Sequence derived from alignment at Contig_163:227160..234019+ (Tribonema minus UTEX_B_3156 )back to top |