mRNA_16173 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|149717 vs. uniprot
Match: A0A836CK09_9STRA (Phosphoribosyltransferase-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK09_9STRA) HSP 1 Score: 648 bits (1671), Expect = 1.470e-234 Identity = 336/336 (100.00%), Postives = 336/336 (100.00%), Query Frame = 1 Query: 1 REDSRSAMWPSKDRPKSGGMKIFSGNANPPLAKEIASYLGINLGKITVARFADGEVNVMVHENVRGKDVYLIQPTCMPVNENLVELLLMVSTMRRASARRITVVIPYYGYARQDRKMTARVPISAADVARLMEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDGGIIGVGYFGDKDLHNPVVVSPDAGGVYRAKKFREGLAAKFDLDAGLAMIVKQRARANEVDRMDLVGSVADSDVIIVDDMIDTAGTLCKAAEILKAQGARRVFAFASHGLFNEPANKRITESALTEVVVLNTIPLSDACANNERIIQLSVAHLIAQAVYNIHNKKSISALFK 1008 REDSRSAMWPSKDRPKSGGMKIFSGNANPPLAKEIASYLGINLGKITVARFADGEVNVMVHENVRGKDVYLIQPTCMPVNENLVELLLMVSTMRRASARRITVVIPYYGYARQDRKMTARVPISAADVARLMEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDGGIIGVGYFGDKDLHNPVVVSPDAGGVYRAKKFREGLAAKFDLDAGLAMIVKQRARANEVDRMDLVGSVADSDVIIVDDMIDTAGTLCKAAEILKAQGARRVFAFASHGLFNEPANKRITESALTEVVVLNTIPLSDACANNERIIQLSVAHLIAQAVYNIHNKKSISALFK Sbjct: 1 REDSRSAMWPSKDRPKSGGMKIFSGNANPPLAKEIASYLGINLGKITVARFADGEVNVMVHENVRGKDVYLIQPTCMPVNENLVELLLMVSTMRRASARRITVVIPYYGYARQDRKMTARVPISAADVARLMEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDGGIIGVGYFGDKDLHNPVVVSPDAGGVYRAKKFREGLAAKFDLDAGLAMIVKQRARANEVDRMDLVGSVADSDVIIVDDMIDTAGTLCKAAEILKAQGARRVFAFASHGLFNEPANKRITESALTEVVVLNTIPLSDACANNERIIQLSVAHLIAQAVYNIHNKKSISALFK 336
BLAST of jgi.p|Trimin1|149717 vs. uniprot
Match: D7FTL1_ECTSI (Pribosyltran_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTL1_ECTSI) HSP 1 Score: 567 bits (1461), Expect = 1.360e-200 Identity = 294/349 (84.24%), Postives = 316/349 (90.54%), Query Frame = 1 Query: 1 REDSRSAMWP-------------SKDRPKSGGMKIFSGNANPPLAKEIASYLGINLGKITVARFADGEVNVMVHENVRGKDVYLIQPTCMPVNENLVELLLMVSTMRRASARRITVVIPYYGYARQDRKMTARVPISAADVARLMEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDGGIIGVGYFGDKDLHNPVVVSPDAGGVYRAKKFREGLAAKFDLDAGLAMIVKQRARANEVDRMDLVGSVADSDVIIVDDMIDTAGTLCKAAEILKAQGARRVFAFASHGLFNEPANKRITESALTEVVVLNTIPLSDACANNERIIQLSVAHLIAQAVYNIHNKKSISALFK 1008 REDSRS M P ++DRPKSGGMKIFSGNANP LAK+IA+YLGINLG++ V RFADGEVNVMV ENVRGKDVY+IQPTCMPVNENLVELLLMVSTMRR+SARRIT VIPYYGYARQDRKMTARVPISAADVARLMEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDGG+IGVGYFGD DLHNPVVVSPDAGGVYRAKKFREGLA ++ LDAGLAMI+KQRA+ANEVDRMDLVGSV DSDVIIVDDMIDTAGTLCKAA +LK GARRVFAFASHGLFN PAN+R+ +S L+EVVVL+TIPLS CANN +IIQLSVAHL+AQAVYNIH+KKSISALFK Sbjct: 113 REDSRSTMMPGVXXXXXXXXXXXNRDRPKSGGMKIFSGNANPALAKDIAAYLGINLGRVKVDRFADGEVNVMVKENVRGKDVYIIQPTCMPVNENLVELLLMVSTMRRSSARRITAVIPYYGYARQDRKMTARVPISAADVARLMEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDGGVIGVGYFGDTDLHNPVVVSPDAGGVYRAKKFREGLAHRYGLDAGLAMIIKQRAKANEVDRMDLVGSVKDSDVIIVDDMIDTAGTLCKAASVLKEYGARRVFAFASHGLFNGPANQRLADSELSEVVVLDTIPLSPDCANNPKIIQLSVAHLLAQAVYNIHHKKSISALFK 461
BLAST of jgi.p|Trimin1|149717 vs. uniprot
Match: A0A4D9D5B0_9STRA (Pribosyltran_N domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D5B0_9STRA) HSP 1 Score: 526 bits (1355), Expect = 6.990e-186 Identity = 268/321 (83.49%), Postives = 295/321 (91.90%), Query Frame = 1 Query: 46 KSGGMKIFSGNANPPLAKEIASYLGINLGKITVARFADGEVNVMVHENVRGKDVYLIQPTCMPVNENLVELLLMVSTMRRASARRITVVIPYYGYARQDRKMTARVPISAADVARLMEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDGGIIGVGYFGDKDLHNPVVVSPDAGGVYRAKKFREGLAAKFDLDAGLAMIVKQRARANEVDRMDLVGSVADSDVIIVDDMIDTAGTLCKAAEILKAQGARRVFAFASHGLFNEPANKRITESALTEVVVLNTIPLSDACANNERIIQLSVAHLIAQAVYNIHNKKSISALFK 1008 K+ GMK+FSGNAN LA EIA LG+NLGKITV+RFADGEVNVMVHENVRGKDVY++QPTC PVNENL+ELLLMVSTMRR+SARRIT VIPYYGYARQDRKM ARVPISAADVARL+EAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDGG +GV YFGDKDLHNPV+VSPDAGGVYRAKKFREGLA K+D+DAGLAMI+KQRARANEVDRMDLVGSV DSDV+IVDDMIDTAGTL KAA++L A GARRV++FASHGLF+ PAN+RI++S L EVVVLNTIPL+ A N +I+QLSVA LIAQA+YNIH KKSISALFK Sbjct: 50 KTSGMKLFSGNANTRLAAEIAGQLGMNLGKITVSRFADGEVNVMVHENVRGKDVYIVQPTCSPVNENLMELLLMVSTMRRSSARRITAVIPYYGYARQDRKMQARVPISAADVARLLEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDGGTVGVSYFGDKDLHNPVIVSPDAGGVYRAKKFREGLAQKYDVDAGLAMIIKQRARANEVDRMDLVGSVVDSDVVIVDDMIDTAGTLAKAADVLVANGARRVYSFASHGLFSGPANERISQSKLEEVVVLNTIPLTPAHEANAKIVQLSVAPLIAQAIYNIHQKKSISALFK 370
BLAST of jgi.p|Trimin1|149717 vs. uniprot
Match: A0A7S2UW69_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UW69_9STRA) HSP 1 Score: 515 bits (1327), Expect = 6.830e-181 Identity = 266/343 (77.55%), Postives = 303/343 (88.34%), Query Frame = 1 Query: 1 REDSRSAMWPSK-----DRPKSGG--MKIFSGNANPPLAKEIASYLGINLGKITVARFADGEVNVMVHENVRGKDVYLIQPTCMPVNENLVELLLMVSTMRRASARRITVVIPYYGYARQDRKMTARVPISAADVARLMEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDGGIIGVGYFGDKDLHNPVVVSPDAGGVYRAKKFREGLAAKFDLDAGLAMIVKQRARANEVDRMDLVGSVADSDVIIVDDMIDTAGTLCKAAEILKAQGARRVFAFASHGLFNEPANKRITESALTEVVVLNTIPLSDACANNERIIQLSVAHLIAQAVYNIHNKKSISALFK 1008 R +SRS+MWPS+ K GG +KIFSG AN LA EIA++LG+NLGKI VARF+DGEVNV V+ENVRGKDVY++QPTC P NENL+ELLLMVSTMRR+SA+RIT VIPYYGYARQDRKM ARVPISAADVARL+EAMGVDRV+AVDLHCGQIQGFFGPRVPVDNLDGGIIGV YFGDK+L NPVVVSPDAGGVYRAKKFREGLA K+++DAGLAMI+KQRA+AN V++MDLVG+V DSDVIIVDDMIDTAGTLCKAA+ L +GARRVFAFASHGLF+ PA+ RIT S+L EVVVLN++PL++ NNE+I QLS AHL+AQA+YNIH KKSISALFK Sbjct: 75 RHESRSSMWPSQATSTGSGSKEGGSMIKIFSGQANRKLAIEIANHLGVNLGKIQVARFSDGEVNVQVNENVRGKDVYIVQPTCPPTNENLMELLLMVSTMRRSSAQRITAVIPYYGYARQDRKMQARVPISAADVARLLEAMGVDRVIAVDLHCGQIQGFFGPRVPVDNLDGGIIGVAYFGDKELQNPVVVSPDAGGVYRAKKFREGLAHKYEMDAGLAMIIKQRAKANAVEKMDLVGNVDDSDVIIVDDMIDTAGTLCKAADTLVEKGARRVFAFASHGLFSGPASDRITRSSLAEVVVLNSVPLNEESENNEKITQLSAAHLVAQAIYNIHQKKSISALFK 417
BLAST of jgi.p|Trimin1|149717 vs. uniprot
Match: A0A1E7FFF6_9STRA (Putative ribose-phosphate diphosphokinase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FFF6_9STRA) HSP 1 Score: 479 bits (1233), Expect = 8.410e-168 Identity = 241/326 (73.93%), Postives = 279/326 (85.58%), Query Frame = 1 Query: 34 KDRPKSGGMKIFSGNANPPLAKEIASYLGINLGKITVARFADGEVNVMVHENVRGKDVYLIQPTCMPVNENLVELLLMVSTMRRASARRITVVIPYYGYARQDRKMTARVPISAADVARLMEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDGGIIGVGYFGDKDLHNPVVVSPDAGGVYRAKKFREGLAAKFDL-DAGLAMIVKQRARANEVDRMDLVGSVADSDVIIVDDMIDTAGTLCKAAEILKAQGARRVFAFASHGLFNEPANKRITESALTEVVVLNTIPLSDACANNERIIQLSVAHLIAQAVYNIHNKKSISALFK 1008 K + SGG+K+FSGN N L+ EI YLGINLGK TV RFADGE N+++HENVRGKD Y+IQPTC PVN+N++ELLLM+ST+RRASARRITVVIPYYGYARQDRKM ARVPISAADVARL+E+MGVDRV+AVDLHCGQIQGFFGPRVPVDNLDGGI+G+ YFG KDLHNPVVVSPDAGGVYRAKKF+EGL K+D+ D GLAMIVKQRARA +VDRMDLVG V + D I+VDDMIDTAGTLCKAA++L GARRVFAFASHGL + P N R+ S + E+V+LNTIP S NE++ LSVA L+AQA++N+H KKS+SALFK Sbjct: 14 KAKQHSGGLKLFSGNGNLALSLEICRYLGINLGKATVGRFADGEANIVIHENVRGKDCYIIQPTCPPVNDNIMELLLMISTLRRASARRITVVIPYYGYARQDRKMQARVPISAADVARLIESMGVDRVIAVDLHCGQIQGFFGPRVPVDNLDGGIVGLDYFGSKDLHNPVVVSPDAGGVYRAKKFKEGLMHKYDMQDIGLAMIVKQRARAGKVDRMDLVGDVKNCDCILVDDMIDTAGTLCKAADVLIENGARRVFAFASHGLLSGPGNDRLANSKMEEIVILNTIPTSPQREANEKLTMLSVAPLLAQAIFNVHAKKSLSALFK 339
BLAST of jgi.p|Trimin1|149717 vs. uniprot
Match: A0A1Z5JZU2_FISSO (Ribose-phosphate pyrophosphokinase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JZU2_FISSO) HSP 1 Score: 483 bits (1243), Expect = 2.690e-167 Identity = 246/321 (76.64%), Postives = 280/321 (87.23%), Query Frame = 1 Query: 49 SGGMKIFSGNANPPLAKEIASYLGINLGKITVARFADGEVNVMVHENVRGKDVYLIQPTCMPVNENLVELLLMVSTMRRASARRITVVIPYYGYARQDRKMTARVPISAADVARLMEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDGGIIGVGYFGDKDLHNPVVVSPDAGGVYRAKKFREGLAAKFDL-DAGLAMIVKQRARANEVDRMDLVGSVADSDVIIVDDMIDTAGTLCKAAEILKAQGARRVFAFASHGLFNEPANKRITESALTEVVVLNTIPLSDACANNERIIQLSVAHLIAQAVYNIHNKKSISALFK 1008 SGG+K+FSGN N L+ EIA +LGINLGK TV RFADGEVN +++ENVRGKDVY++QPTC PVN+N++ELLLM+ST+RRASARRITVVIPYYGYARQDRKM ARVPISAADVARLMEAMGVDRV+AVDLHCGQIQGFFGPRVPVDNLDGGI+G+ YFG KDLHNPVVVSPDAGGVYRAKKF+EGL K+++ D GLAMIVKQRARA VD+MDLVG V D D I+VDDMIDTAGTLCKAA++L A GARRVFAFASHGL + P N RI S + EVV+LNTIP S NE++ +LSVA L+AQA++NIH KKSISALFK Sbjct: 152 SGGLKVFSGNGNMSLSLEIARHLGINLGKATVGRFADGEVNCVINENVRGKDVYIVQPTCPPVNDNIMELLLMISTLRRASARRITVVIPYYGYARQDRKMQARVPISAADVARLMEAMGVDRVIAVDLHCGQIQGFFGPRVPVDNLDGGIVGLDYFGCKDLHNPVVVSPDAGGVYRAKKFKEGLEQKYEMNDVGLAMIVKQRARAGAVDQMDLVGDVKDCDCILVDDMIDTAGTLCKAADVLIASGARRVFAFASHGLLSGPGNDRIANSNIEEVVILNTIPTSPQREANEKLTELSVAPLLAQAIFNIHAKKSISALFK 472
BLAST of jgi.p|Trimin1|149717 vs. uniprot
Match: A0A7S2S1M6_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S1M6_9STRA) HSP 1 Score: 480 bits (1235), Expect = 3.240e-166 Identity = 243/326 (74.54%), Postives = 279/326 (85.58%), Query Frame = 1 Query: 34 KDRPKSGGMKIFSGNANPPLAKEIASYLGINLGKITVARFADGEVNVMVHENVRGKDVYLIQPTCMPVNENLVELLLMVSTMRRASARRITVVIPYYGYARQDRKMTARVPISAADVARLMEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDGGIIGVGYFGDKDLHNPVVVSPDAGGVYRAKKFREGLAAKFDL-DAGLAMIVKQRARANEVDRMDLVGSVADSDVIIVDDMIDTAGTLCKAAEILKAQGARRVFAFASHGLFNEPANKRITESALTEVVVLNTIPLSDACANNERIIQLSVAHLIAQAVYNIHNKKSISALFK 1008 K + +GG+KIFSGN N LA EIA LGINLGK TV +FADGE NVM+HENVRGKD Y+IQPTC PVN+N++ELLLMVST+ RASARRITVVIPYYGYARQDRKM ARVPISAADVARL+EAMG+DRV+AVDLHCGQIQGFFGPRVPVDNLDGG +G+ +FGDKDLHNPV+VSPDAGGVYRAKKF+EGL K++ D GLAMI+KQRARA VD+MDLVG V D D IIVDDMIDTAGTLCKAA++LK++GARRVFAFASHGL + P N RI S L E V+LNTIP S N+++++LSVA L+AQ ++NIH KKSISALFK Sbjct: 138 KAKKHAGGLKIFSGNGNMTLALEIAQILGINLGKATVGQFADGETNVMIHENVRGKDCYVIQPTCPPVNDNIMELLLMVSTLNRASARRITVVIPYYGYARQDRKMQARVPISAADVARLLEAMGIDRVIAVDLHCGQIQGFFGPRVPVDNLDGGFVGIDHFGDKDLHNPVIVSPDAGGVYRAKKFKEGLMHKYEKHDIGLAMIIKQRARAGTVDQMDLVGDVKDCDCIIVDDMIDTAGTLCKAADVLKSKGARRVFAFASHGLLSGPGNHRIANSELEECVILNTIPSSPQRTANDKLVELSVAPLLAQTIFNIHAKKSISALFK 463
BLAST of jgi.p|Trimin1|149717 vs. uniprot
Match: A0A7S3Q5B0_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q5B0_9STRA) HSP 1 Score: 479 bits (1232), Expect = 4.820e-166 Identity = 245/336 (72.92%), Postives = 284/336 (84.52%), Query Frame = 1 Query: 4 EDSRSAMWPSKDRPKSGGMKIFSGNANPPLAKEIASYLGINLGKITVARFADGEVNVMVHENVRGKDVYLIQPTCMPVNENLVELLLMVSTMRRASARRITVVIPYYGYARQDRKMTARVPISAADVARLMEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDGGIIGVGYFGDKDLHNPVVVSPDAGGVYRAKKFREGLAAKFDL-DAGLAMIVKQRARANEVDRMDLVGSVADSDVIIVDDMIDTAGTLCKAAEILKAQGARRVFAFASHGLFNEPANKRITESALTEVVVLNTIPLSDACANNERIIQLSVAHLIAQAVYNIHNKKSISALFK 1008 E+ R + K + GG+K+FSGN N L+ EIA LGINLGK TV +FADGEVNV +HENVRGKDVY+IQPTC PVN NL+ELLLMVST+ RASARRIT+VIPYYGYARQDRKM ARVPISAADVARL+EAMG+DRVVAVDLHCGQIQGFFGPRVPVDNLDGGI+G+ +FG KDL+NPV+VSPDAGGVYRAKKF+EGLA K+++ D GLAMI+KQRARA VD+MDLVG V D D IIVDDMIDTAGT+CKAA +LK +GARRVFAFASHGL + P N RI++SA+ E V+LNTIP S NE+++ LSVA L+AQ ++NIH KKSISALFK Sbjct: 109 EEERLELAVLKAKKHGGGLKLFSGNGNLALSLEIARILGINLGKATVGQFADGEVNVQIHENVRGKDVYIIQPTCPPVNNNLMELLLMVSTLNRASARRITIVIPYYGYARQDRKMQARVPISAADVARLLEAMGIDRVVAVDLHCGQIQGFFGPRVPVDNLDGGIVGIDHFGSKDLYNPVIVSPDAGGVYRAKKFKEGLAHKYEMKDIGLAMIIKQRARAGTVDKMDLVGDVNDCDCIIVDDMIDTAGTICKAAAVLKEKGARRVFAFASHGLLSGPGNDRISKSAMEECVILNTIPTSPQRQANEKLVVLSVAPLLAQTIFNIHAKKSISALFK 444
BLAST of jgi.p|Trimin1|149717 vs. uniprot
Match: K3WAD7_GLOUD (Pribosyltran_N domain-containing protein n=4 Tax=Pythiaceae TaxID=4782 RepID=K3WAD7_GLOUD) HSP 1 Score: 476 bits (1225), Expect = 6.170e-166 Identity = 241/323 (74.61%), Postives = 278/323 (86.07%), Query Frame = 1 Query: 40 RPKSGGMKIFSGNANPPLAKEIASYLGINLGKITVARFADGEVNVMVHENVRGKDVYLIQPTCMPVNENLVELLLMVSTMRRASARRITVVIPYYGYARQDRKMTARVPISAADVARLMEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDGGIIGVGYFGDKDLHNPVVVSPDAGGVYRAKKFREGLAAKFDL-DAGLAMIVKQRARANEVDRMDLVGSVADSDVIIVDDMIDTAGTLCKAAEILKAQGARRVFAFASHGLFNEPANKRITESALTEVVVLNTIPLSDACANNERIIQLSVAHLIAQAVYNIHNKKSISALF 1005 +PK G+KIFSGNANP LA +A +G+ LGKITV RFADGEVNVMVHENVRGKDVY++QPTC+PVNENL+ELLLMVSTMRR+SARRIT VIPYYGYARQDRKM ARVPISAADVARL+EAMGVDRV++VDLHCGQIQGFFGPRVPVDNLDGG++GV YFG+ +L NPVVVSPDAGGV RAKKFRE L K L + GLAMI+KQR +ANE+D+MDLVG+V SD IIVDDMIDTAGTLCKAA+ L GAR V+AFASHGLFN A+++I SAL EVVV+NT PL ++C NE+I+QL +A L+AQA+ NIH KKS+S LF Sbjct: 58 QPKINGLKIFSGNANPELASNVAKLVGVELGKITVERFADGEVNVMVHENVRGKDVYIVQPTCVPVNENLMELLLMVSTMRRSSARRITAVIPYYGYARQDRKMAARVPISAADVARLLEAMGVDRVISVDLHCGQIQGFFGPRVPVDNLDGGLVGVSYFGNHELVNPVVVSPDAGGVARAKKFREWLVGKHGLQNTGLAMIIKQRIKANEIDKMDLVGNVEGSDCIIVDDMIDTAGTLCKAAQHLSDHGARNVYAFASHGLFNGSASEKIKNSALKEVVVVNTTPLPESCKGNEKIVQLDIAPLVAQAICNIHGKKSVSMLF 380
BLAST of jgi.p|Trimin1|149717 vs. uniprot
Match: A0A067CHF0_SAPPC (Pribosyltran_N domain-containing protein n=9 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CHF0_SAPPC) HSP 1 Score: 475 bits (1223), Expect = 9.370e-166 Identity = 244/323 (75.54%), Postives = 277/323 (85.76%), Query Frame = 1 Query: 40 RPKSGGMKIFSGNANPPLAKEIASYLGINLGKITVARFADGEVNVMVHENVRGKDVYLIQPTCMPVNENLVELLLMVSTMRRASARRITVVIPYYGYARQDRKMTARVPISAADVARLMEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDGGIIGVGYFGDKDLHNPVVVSPDAGGVYRAKKFREGLAAKFDLD-AGLAMIVKQRARANEVDRMDLVGSVADSDVIIVDDMIDTAGTLCKAAEILKAQGARRVFAFASHGLFNEPANKRITESALTEVVVLNTIPLSDACANNERIIQLSVAHLIAQAVYNIHNKKSISALF 1005 +PK G+KIFSGNAN PLA ++A +G+NLGKITV RFADGEVNVMVHENVRGKDVY++QPTC+PVNENL+ELLLMVSTMRRASARRIT VIPYYGYARQDRKM ARVPISAADVARL+EAMGVDRV+AVDLHCGQIQGFFGPRVPVDNLDGG++GV +FG+ +L NPVVVSPDAGGV RAKKFRE L K ++ GLAMI+KQR RANE+ MDLVG+V+ SD IIVDDMIDTAGTLCKAA+ L GAR V+AFASHGLFN PA++RI SAL +VVVLNT PL +C NE+I QL VA L+A A+ NIH KKS+S LF Sbjct: 50 QPKMNGLKIFSGNANSPLASKVAELVGVNLGKITVERFADGEVNVMVHENVRGKDVYIVQPTCVPVNENLMELLLMVSTMRRASARRITAVIPYYGYARQDRKMAARVPISAADVARLLEAMGVDRVIAVDLHCGQIQGFFGPRVPVDNLDGGLVGVSHFGNMELVNPVVVSPDAGGVARAKKFREWLVGKEGIENVGLAMIIKQRVRANEIGSMDLVGNVSGSDCIIVDDMIDTAGTLCKAAQHLADHGARNVYAFASHGLFNGPASERIKASALKQVVVLNTTPLPASCVGNEKIKQLDVAPLLASAILNIHGKKSVSQLF 372 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|149717 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_16173 ID=mRNA_16173|Name=jgi.p|Trimin1|149717|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1008bp|location=Sequence derived from alignment at Contig_163:112526..115722- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. AGGGAAGACTCCCGGTCGGCCATGTGGCCCTCCAAGGACAGGCCGAAGAGback to top protein sequence of jgi.p|Trimin1|149717 >Trimin1|149717|gw1.163.32.1 ID=Trimin1|149717|gw1.163.32.1|Name=jgi.p|Trimin1|149717|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=336bp REDSRSAMWPSKDRPKSGGMKIFSGNANPPLAKEIASYLGINLGKITVARback to top mRNA from alignment at Contig_163:112526..115722- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_16173 ID=mRNA_16173|Name=jgi.p|Trimin1|149717|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3197bp|location=Sequence derived from alignment at Contig_163:112526..115722- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_163:112526..115722- >mRNA_16173 ID=mRNA_16173|Name=jgi.p|Trimin1|149717|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1008bp|location=Sequence derived from alignment at Contig_163:112526..115722- (Tribonema minus UTEX_B_3156 )back to top |