mRNA_16167 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|136177 vs. uniprot
Match: A0A835ZG13_9STRA (Tctex-1 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG13_9STRA) HSP 1 Score: 222 bits (565), Expect = 2.140e-73 Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 1 Query: 1 QPAYRKRASVNQMREIIRAILEEQLSGQTYSGDVATAQTKKISDEIKDRLKTMSLDRYKYVVQVIIGEQRGEGVRMGCRCFWDADTDACASESFINDHIFCVATAYGIYHY 333 QPAYRKRASVNQMREIIRAILEEQLSGQTYSGDVATAQTKKISDEIKDRLKTMSLDRYKYVVQVIIGEQRGEGVRMGCRCFWDADTDACASESFINDHIFCVATAYGIYHY Sbjct: 1 QPAYRKRASVNQMREIIRAILEEQLSGQTYSGDVATAQTKKISDEIKDRLKTMSLDRYKYVVQVIIGEQRGEGVRMGCRCFWDADTDACASESFINDHIFCVATAYGIYHY 111
BLAST of jgi.p|Trimin1|136177 vs. uniprot
Match: F0YJL5_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJL5_AURAN) HSP 1 Score: 140 bits (352), Expect = 9.460e-41 Identity = 67/109 (61.47%), Postives = 83/109 (76.15%), Query Frame = 1 Query: 1 QPAYRKRASVNQMREIIRAILEEQLSGQTYSGDVATAQTKKISDEIKDRLKTMSLDRYKYVVQVIIGEQRGEGVRMGCRCFWDADTDACASESFINDHIFCVATAYGIY 327 +PAY RAS +M+E+I+ +L+E LSGQTY GD QTK I+D +KD+LK L RYK++VQV+IGEQRGEGVRMGCR FWD DTD ASE+F ND IFC+ AY +Y Sbjct: 14 RPAYGMRASPTKMKELIKEVLKESLSGQTYQGDQVQQQTKLIADTVKDKLKGELLPRYKFMVQVVIGEQRGEGVRMGCRTFWDRDTDTYASETFTNDSIFCIVVAYAVY 122
BLAST of jgi.p|Trimin1|136177 vs. uniprot
Match: A0A7S2BCB7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BCB7_9STRA) HSP 1 Score: 140 bits (353), Expect = 1.560e-40 Identity = 64/111 (57.66%), Postives = 90/111 (81.08%), Query Frame = 1 Query: 1 QPAYRKRASVNQMREIIRAILEEQLSGQTYSGDVATAQTKKISDEIKDRLKTMSLDRYKYVVQVIIGEQRGEGVRMGCRCFWDADTDACASESFINDHIFCVATAYGIYHY 333 +P YR+R SVN+M+ +I+++++E+L G+TY + QT I+D+I++RL+ + RYK+ VQV+IGEQRGEGVRMGCR FWDADTDA ASE+++ND +FCVATAYG+Y Y Sbjct: 42 RPEYRQRISVNEMKVVIKSVVKEELEGKTYQTESVQDQTTAIADKIRNRLRDLQKPRYKFFVQVVIGEQRGEGVRMGCRTFWDADTDAYASETYVNDSLFCVATAYGVYLY 152
BLAST of jgi.p|Trimin1|136177 vs. uniprot
Match: A0A7S2S8M8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S8M8_9STRA) HSP 1 Score: 137 bits (346), Expect = 7.510e-40 Identity = 65/111 (58.56%), Postives = 89/111 (80.18%), Query Frame = 1 Query: 1 QPAYRKRASVNQMREIIRAILEEQLSGQTYSGDVATAQTKKISDEIKDRLKTMSLDRYKYVVQVIIGEQRGEGVRMGCRCFWDADTDACASESFINDHIFCVATAYGIYHY 333 +PAY++R SV M+ II +++E+L G+TY+ D A QTK ISDEI++RLK + L RYK++VQV++GE R EGVRMGCR FWDA+TDA A+ +++ND +FCVATAYG+Y Y Sbjct: 13 RPAYKQRVSVAAMKTIIDTVMKEELEGKTYAVDQAQVQTKHISDEIRNRLKALDLPRYKFMVQVVLGEMRLEGVRMGCRTFWDAETDAHATSNYMNDSLFCVATAYGVYLY 123
BLAST of jgi.p|Trimin1|136177 vs. uniprot
Match: A0A2C9KTG2_BIOGL (Uncharacterized protein n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9KTG2_BIOGL) HSP 1 Score: 131 bits (329), Expect = 5.950e-37 Identity = 61/111 (54.95%), Postives = 84/111 (75.68%), Query Frame = 1 Query: 1 QPAYRKRASVNQMREIIRAILEEQLSGQTYSGDVATAQTKKISDEIKDRLKTMSLDRYKYVVQVIIGEQRGEGVRMGCRCFWDADTDACASESFINDHIFCVATAYGIYHY 333 +P Y ++ ++E+I +L E+LSG TYS + +TA TK I+D IK +LK + DRYK++VQV+IGEQRGEGV+MGCRCFWD+DTD A + FIN+ +FCVA AYG++ Y Sbjct: 37 RPNYSQKFRPANVKELIHTVLGEKLSGVTYSSEESTALTKDIADSIKFKLKDLGYDRYKFIVQVVIGEQRGEGVKMGCRCFWDSDTDNYAQDIFINESLFCVAAAYGVFKY 147
BLAST of jgi.p|Trimin1|136177 vs. uniprot
Match: A0A7S3XGP2_OXYMA (Hypothetical protein n=1 Tax=Oxyrrhis marina TaxID=2969 RepID=A0A7S3XGP2_OXYMA) HSP 1 Score: 130 bits (327), Expect = 6.020e-37 Identity = 63/110 (57.27%), Postives = 85/110 (77.27%), Query Frame = 1 Query: 4 PAYRKRASVNQMREIIRAILEEQLSGQTYSGDVATAQTKKISDEIKDRLKTMSLDRYKYVVQVIIGEQRGEGVRMGCRCFWDADTDACASESFINDHIFCVATAYGIYHY 333 P Y+ + Q++EIIRA L ++L+GQ Y+ + T TK ++D+I+DRLK + L RYK+VVQVIIGEQ+G+GVRM RCFWD DTDA ASESF N+ ++C+ATAYG+Y Y Sbjct: 15 PEYKHKFRPAQVKEIIRASLNQKLTGQAYNVEQTTVLTKAVADDIRDRLKELQLPRYKFVVQVIIGEQKGQGVRMANRCFWDGDTDAQASESFHNETLWCIATAYGVYLY 124
BLAST of jgi.p|Trimin1|136177 vs. uniprot
Match: A0A088MHF4_EUGGR (Putative Tctex-1 domain-containing protein 1 n=1 Tax=Euglena gracilis TaxID=3039 RepID=A0A088MHF4_EUGGR) HSP 1 Score: 130 bits (326), Expect = 7.130e-37 Identity = 58/111 (52.25%), Postives = 84/111 (75.68%), Query Frame = 1 Query: 1 QPAYRKRASVNQMREIIRAILEEQLSGQTYSGDVATAQTKKISDEIKDRLKTMSLDRYKYVVQVIIGEQRGEGVRMGCRCFWDADTDACASESFINDHIFCVATAYGIYHY 333 +P ++K+ ++EI++ +L+E+L GQ Y D T TK+I+D I+DRLK + DRYK++V V+IGEQRGEG++MGCRCFWD+DTD A E +I+ +FCVAT +G+YHY Sbjct: 8 RPNHKKKFRGPVVKEIMKKVLQEKLEGQEYQADNVTNSTKEIADAIRDRLKELGWDRYKFIVSVVIGEQRGEGLKMGCRCFWDSDTDNYAEELYISKQLFCVATVFGLYHY 118
BLAST of jgi.p|Trimin1|136177 vs. uniprot
Match: UPI0014557313 (tctex1 domain-containing protein 2-like isoform X1 n=2 Tax=Asterias rubens TaxID=7604 RepID=UPI0014557313) HSP 1 Score: 128 bits (321), Expect = 7.040e-36 Identity = 57/98 (58.16%), Postives = 76/98 (77.55%), Query Frame = 1 Query: 40 REIIRAILEEQLSGQTYSGDVATAQTKKISDEIKDRLKTMSLDRYKYVVQVIIGEQRGEGVRMGCRCFWDADTDACASESFINDHIFCVATAYGIYHY 333 +E I +L E L+ + Y + TA K+IS EIK++LK + LDRYKY+VQV+IGEQRGEGV+MGCRCFWD+DTD A + F+ND +FCVA A+G++HY Sbjct: 39 KEAIHVVLNEMLAEKQYDAEETTAWCKEISSEIKEKLKALGLDRYKYIVQVVIGEQRGEGVKMGCRCFWDSDTDNYAQDIFMNDSLFCVAAAFGVFHY 136
BLAST of jgi.p|Trimin1|136177 vs. uniprot
Match: UPI0003595375 (tctex1 domain-containing protein 2 n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI0003595375) HSP 1 Score: 128 bits (322), Expect = 7.290e-36 Identity = 59/99 (59.60%), Postives = 80/99 (80.81%), Query Frame = 1 Query: 37 MREIIRAILEEQLSGQTYSGDVATAQTKKISDEIKDRLKTMSLDRYKYVVQVIIGEQRGEGVRMGCRCFWDADTDACASESFINDHIFCVATAYGIYHY 333 ++E++ +L E+L+G+TYS + TA TK+IS+ I+DRLK M DRYK+VVQV+IGEQRGEGV+M CRCFWD+DTD A + F+ND +FCVA AYG++ Y Sbjct: 51 VKEMLHTVLGEKLTGKTYSSEDTTAWTKEISETIRDRLKDMGHDRYKFVVQVVIGEQRGEGVKMCCRCFWDSDTDNYAQDIFMNDSLFCVAAAYGVFKY 149
BLAST of jgi.p|Trimin1|136177 vs. uniprot
Match: S7WFN7_TOXGG (Tctex2-related light chain n=15 Tax=Toxoplasma gondii TaxID=5811 RepID=S7WFN7_TOXGG) HSP 1 Score: 127 bits (318), Expect = 1.630e-35 Identity = 58/110 (52.73%), Postives = 84/110 (76.36%), Query Frame = 1 Query: 4 PAYRKRASVNQMREIIRAILEEQLSGQTYSGDVATAQTKKISDEIKDRLKTMSLDRYKYVVQVIIGEQRGEGVRMGCRCFWDADTDACASESFINDHIFCVATAYGIYHY 333 PAYR + ++EI++++L QL G Y+ + + TK+I++EIKDRLK + + RYK +V VI+GEQRG+GVR+G RCFWD +TD+ A+ESF+NDH+FC+ATAY +Y Y Sbjct: 20 PAYRHKFKSKPVKEILKSVLHGQLEGVEYNAEESPLLTKQIANEIKDRLKDLDVPRYKILVNVILGEQRGQGVRLGRRCFWDNNTDSVANESFVNDHLFCIATAYAVYLY 129 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|136177 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_16167 ID=mRNA_16167|Name=jgi.p|Trimin1|136177|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=333bp|location=Sequence derived from alignment at Contig_163:26729..28321- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. CAGCCCGCGTATCGGAAACGAGCGAGTGTGAATCAGATGCGCGAGATAATback to top protein sequence of jgi.p|Trimin1|136177 >Trimin1|136177|gw1.163.23.1 ID=Trimin1|136177|gw1.163.23.1|Name=jgi.p|Trimin1|136177|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=111bp QPAYRKRASVNQMREIIRAILEEQLSGQTYSGDVATAQTKKISDEIKDRLback to top mRNA from alignment at Contig_163:26729..28321- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_16167 ID=mRNA_16167|Name=jgi.p|Trimin1|136177|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1593bp|location=Sequence derived from alignment at Contig_163:26729..28321- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_163:26729..28321- >mRNA_16167 ID=mRNA_16167|Name=jgi.p|Trimin1|136177|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=333bp|location=Sequence derived from alignment at Contig_163:26729..28321- (Tribonema minus UTEX_B_3156 )back to top |