Homology
BLAST of jgi.p|Trimin1|353155 vs. uniprot
Match: A0A836CKA6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKA6_9STRA) HSP 1 Score: 1094 bits (2830), Expect = 0.000e+0 Identity = 1039/1039 (100.00%), Postives = 1039/1039 (100.00%), Query Frame = 1 Query: 1 MQALLSDGFQVLSSVTFGATGEIISERGTAHHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNSSGLVIGMRHSASVPHLHLPPTXXXXXXXXXXXXXXXXXXXXXXXXXXXLNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGMGCAGXXXXXXXXXXXMMDAPSPLHGAMPPPQSTMPSPGLYPQHGPGGSRVAGQRPIRPRISLRVASGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGVQHSQSQQLQPPLFKRPTISLSVRRHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLADAALVARLAAFQDGAPRVAIAANAAALAAAGHASLVRDRCAHGERVAPSRAALPLAALGGXXXXXXXVALLDALYDAAGARGGSGVLTLQAAVARGDVAAARWALERCDRAAAAAAGVGCVIXXXXXXDGAMLQWLASSGVSTPAVPRALEEAAKGGHVAAVHWLVTQQSESVMRSSAXXXXXQGCIPDAAAISAAAAAGHTAVVHKLLLLAGPTAALSLGSAALAAACGAGQLELARWLWGVGGAALDAASXXXXXXXXXXXXXXXFLLLRAGEXXXXXXXXXXXXXXXXXXXXXRRRWRSAVGAAAAEAHNAVAAVLNAVXXXXXXXXXXXXXXXXXXXXXXXXXXANACAAAREGGAGVGARTHGAAAEVADXXXXXXXXXXXXSGGVRCRRRGQGXXXXXXXXXXXXXYRAARVCTLAAAAVARRCVGTGGGHAHDPHVKQRSGISSAXXXXXXXXXXXAQLDGCGLYLPVYAARSVKRQRPAASPAHAGNRQRCPLRRLVVVRNLESLYSKSKYPPTDEDPKGKGPPAAGEALPAAAEGGANASHRPSAESEERDSFSKAAISGGVEGAREKVEKGTAPGEKAKEKMEDMINSAIHTVEKAMPGSNKDLPDRDFTPPPPKKGSS 3117
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
Sbjct: 1 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 1039
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | Trimin1|353155|estExt_Genemark1.C_Ctg_1460032 |
| Hectar predicted targeting category | other localisation |
| TranscriptId | 353477 |
| Track | FilteredModels1 |
| ProteinId | 353155 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_16157 ID=mRNA_16157|Name=jgi.p|Trimin1|353155|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3348bp|location=Sequence derived from alignment at Contig_146:308143..315493+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.
ATGCAAGCGCTGCTCTCGGATGGCTTCCAGGTCCTCAGTAGTGTCACATT
TGGCGCCACGGGCGAGATCATCAGCGAGCGTGGCACCGCCCACCACGGCA
GCAGCAACGGCGCCGGCGGCGGCGGCGGCGCAGCGGCGGCGGCGGCAGCG
GCGGGCAAGGGCAGCCGACCCCCAAGCGGTTGCACTGCCGCCGCCCACCC
ACGCAGGGCATCTCATTCATCGCCGCCGCTGCCGCCTGACAACAGCTCAG
GACTGGTGATAGGCATGCGGCACAGCGCGTCGGTGCCGCACCTGCACCTG
CCGCCGACCGCAGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGAAGC
GGCGGCGGCGGCGGCAGGGGGCCGCGGTACAAGCCCCGCGCTGAATGGGC
TCGGCGGCGGCGGCGTGGAGCGCAGGGCAGCGGAGAGCGCAGATGTGGCG
GCGCAGATGCGGCGCTGCACGACGGCGCCCGGCGCGCTGCACCACGAGAC
GGACGCGCTGCCGCCGCAGCAGCACAAGCGACGCCGCTCAAGCGACGGCA
GCGACGCGGACGCCGCGGGCTCTCTCATTCTCATGGGCAATGGGGGTGGC
GCTGCCGCCGCCGCCGCGCGCGGCGGCATGGGCTGCGCCGGCGGCAGCAG
CGGCAGCCTCAGCAGCAGCGGCGGCATGATGGATGCGCCGTCGCCCCTGC
ACGGCGCGATGCCGCCGCCACAGTCGACCATGCCGTCCCCGGGTCTGTAC
CCGCAGCACGGCCCCGGGGGGAGCAGAGTTGCAGGCCAGCGGCCCATACG
CCCACGCATCAGCCTGCGCGTTGCGTCGGGGACGGCCGGCGGCGGCAGTG
GCGGAGCAGCAGCAGCAGCAGCGGCGGCGAATGCGGCGCCGAAGCTGCTG
CCCGCGCAGCAGCAGGCGCAGAAACCCGCGGTGACGGTGGCAGTGGGGGG
TGCGATGAACGGCGTGCAGCACTCGCAGTCGCAGCAGCTGCAGCCGCCGC
TCTTCAAGCGGCCCACGATCTCGCTCAGCGTGCGCAGGCACGGCGGCGGC
AGCAACGGCAGCACCCCTAGCAGTACCAGCAGCGGGCGGAGCTCCTCTAA
CGGCTTCGGGAACAGCGGCGGTGGCGGCGGCGCTGCGCAGTGCAGCGCGA
CCAGCTGGAGCCCGCCGCGCTCGCGTCCGTCGCCCGCTGGCAGCAGCAGC
GGCGGCGGCGCGGCGGCGGCGGTGCTGGCGGACGCGGCGCTCGTGGCGCG
GCTGGCGGCATTCCAGGACGGCGCGCCACGCGTCGCCATCGCGGCGAACG
CCGCGGCGCTGGCGGCGGCTGGCCACGCGTCGCTCGTGCGCGACCGCTGC
GCGCACGGCGAGCGCGTGGCGCCGAGCCGCGCGGCGCTGCCGCTGGCGGC
GCTCGGCGGCGGCGGCAGCGGCGGCGGCGGCGTGGCGCTGCTGGACGCGC
TGTACGACGCGGCGGGCGCGCGCGGCGGGAGCGGCGTGCTGACACTGCAG
GCGGCGGTGGCGCGCGGCGACGTCGCGGCGGCGCGCTGGGCACTAGAGCG
CTGCGACCGCGCGGCGGCGGCGGCGGCAGGCGTCGGGTGCGTGATCGCGG
CCGCGGCGCGCGGCGACGGCGCCATGCTGCAGTGGCTCGCATCATCCGGC
GTGAGCACGCCCGCGGTGCCCAGGGCGCTGGAGGAGGCTGCGAAGGGCGG
GCACGTCGCCGCGGTGCACTGGCTGGTCACGCAGCAGTCGGAGTCGGTGA
TGCGCAGCTCGGCGCACTGGCTGGTCACGCAGGGCTGCATCCCCGACGCC
GCCGCCATCAGCGCCGCCGCCGCCGCCGGCCACACAGCCGTTGTCCACAA
GCTGCTGCTGCTCGCGGGCCCCACAGCAGCGCTCTCCCTCGGCAGCGCGG
CGCTCGCGGCGGCGTGCGGCGCAGGGCAGCTGGAGCTCGCGCGCTGGCTG
TGGGGCGTCGGCGGCGCGGCGCTGGATGCTGCGTCAGCTCTCAATGCCGC
GCTCGGCCGCGGCCAGTGGGAGGCCGCGCGGTTCCTGCTGCTGCGCGCGG
GGGAGGCGCTGGCCGCTGCGCTCCGCCGCGGCCAGTGGGAGGCCGCGCGC
TTCCTGCTGCTACGCGCGAGGAGGCGCTGGCGTAGTGCAGTGGGGGCGGC
GGCGGCGGAGGCGCACAACGCGGTAGCAGCAGTGCTCAACGCCGTGTCAG
CGCTCAACGCCGCGCTCGACCGCGGCCAGCGGGAGGCCGCGCGCTTCCTG
TTGCTGCGCGGACGGGAGGCGCTGGCCAACGCGTGTGCTGCTGCGCGCGA
GGGAGGCGCTGGCGTAGGCGCGCGCACTCACGGTGCGGCGGCGGAGGTAG
CGGACGCGGCAGCAGCAGTGCGCGACGCTGCGGCGGAGCTCAGCGGCGGC
GTGCGCTGCCGGCGGCGGGGGCAAGGAGGAGCGATTCGAGGCGCTGCTGC
TGCGGTGCGGGGCAGCTACCGGGCTGCGCGTGTGTGCACGCTCGCAGCGG
CAGCGGTCGCGCGGCGCTGCGTGGGCACTGGTGGCGGGCATGCGCATGAC
CCGCACGTGAAGCAGCGGAGCGGCATCAGCAGCGCAGCGGCGGCAGCGGC
AGCGGCACCAGCGGCGGCGGCGCAGCTCGACGGCTGCGGCTTATACCTAC
CCGTATACGCCGCGCGCTCTGTCAAGCGGCAGCGCCCCGCAGCATCACCC
GCGCACGCGGGCAACAGGCAACGTTGCCCGCTGCGGCGGCTGGTCGTCGT
GCGGAACCTGGAATCCCTCTACAGCAAGTCCAAATACCCTCCCACAGACG
AGGATCCGAAGGGAAAAGGCCCGCCAGCTGCAGGAGAAGCTCTCCCGGCA
GCCGCTGAAGGTGGTGCGAATGCCTCTCACAGGCCCTCCGCCGAGAGCGA
AGAGAGGGACTCATTTTCCAAGGCAGCCATTAGCGGCGGAGTCGAGGGTG
CCCGCGAGAAGGTGGAGAAGGGAACAGCACCAGGGGAGAAGGCGAAGGAG
AAAATGGAGGACATGATCAACTCGGCCATCCACACTGTGGAGAAGGCCAT
GCCAGGCAGCAACAAGGACCTGCCAGACAGGGACTTTACCCCGCCGCCGC
CCAAGAAGGGCAGCAGTTGAAGAAGTGGAGCGTTACACTTGAAGAAGTGG
AGCGCCACGCTTTACCATCAACAGGGCGCGAGCGATCTGACGTGGGGTCT
CAGGCGCGATGTTTGTGATATACTTAGTCCCCAGTACCTACCCTCCCCAG
CTTCCCGCGAGGTACTGAGGAGTGACTATATCGATCTGCGCAACCGTAGT
GACAGGGCTCGCGCGAGCGTGCTGCTGTAGAGCGGTGCTGCGTACGCA back to topprotein sequence of jgi.p|Trimin1|353155 >Trimin1|353155|estExt_Genemark1.C_Ctg_1460032 ID=Trimin1|353155|estExt_Genemark1.C_Ctg_1460032|Name=jgi.p|Trimin1|353155|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1040bp
MQALLSDGFQVLSSVTFGATGEIISERGTAHHGSSNGAGGGGGAAAAAAA
AGKGSRPPSGCTAAAHPRRASHSSPPLPPDNSSGLVIGMRHSASVPHLHL
PPTAAAAAAAAAAAAEAAAAAAGGRGTSPALNGLGGGGVERRAAESADVA
AQMRRCTTAPGALHHETDALPPQQHKRRRSSDGSDADAAGSLILMGNGGG
AAAAAARGGMGCAGGSSGSLSSSGGMMDAPSPLHGAMPPPQSTMPSPGLY
PQHGPGGSRVAGQRPIRPRISLRVASGTAGGGSGGAAAAAAAANAAPKLL
PAQQQAQKPAVTVAVGGAMNGVQHSQSQQLQPPLFKRPTISLSVRRHGGG
SNGSTPSSTSSGRSSSNGFGNSGGGGGAAQCSATSWSPPRSRPSPAGSSS
GGGAAAAVLADAALVARLAAFQDGAPRVAIAANAAALAAAGHASLVRDRC
AHGERVAPSRAALPLAALGGGGSGGGGVALLDALYDAAGARGGSGVLTLQ
AAVARGDVAAARWALERCDRAAAAAAGVGCVIAAAARGDGAMLQWLASSG
VSTPAVPRALEEAAKGGHVAAVHWLVTQQSESVMRSSAHWLVTQGCIPDA
AAISAAAAAGHTAVVHKLLLLAGPTAALSLGSAALAAACGAGQLELARWL
WGVGGAALDAASALNAALGRGQWEAARFLLLRAGEALAAALRRGQWEAAR
FLLLRARRRWRSAVGAAAAEAHNAVAAVLNAVSALNAALDRGQREAARFL
LLRGREALANACAAAREGGAGVGARTHGAAAEVADAAAAVRDAAAELSGG
VRCRRRGQGGAIRGAAAAVRGSYRAARVCTLAAAAVARRCVGTGGGHAHD
PHVKQRSGISSAAAAAAAAPAAAAQLDGCGLYLPVYAARSVKRQRPAASP
AHAGNRQRCPLRRLVVVRNLESLYSKSKYPPTDEDPKGKGPPAAGEALPA
AAEGGANASHRPSAESEERDSFSKAAISGGVEGAREKVEKGTAPGEKAKE
KMEDMINSAIHTVEKAMPGSNKDLPDRDFTPPPPKKGSS* back to topmRNA from alignment at Contig_146:308143..315493+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_16157 ID=mRNA_16157|Name=jgi.p|Trimin1|353155|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=7351bp|location=Sequence derived from alignment at Contig_146:308143..315493+ (Tribonema minus UTEX_B_3156 )
ATGCAAGCGCTGCTCTCGGATGGCTTCCAGGTCCTCAGTAGTGTCACATT
TGGCGCCACGGGCGAGATCATCAGCGAGCGTGGCACCGCCCACCACGGCA
GCAGCAACGGCGCCGGCGGCGGCGGCGGCGCAGCGGCGGCGGCGGCAGCG
GCGGGCAAGGGCAGCCGACCCCCAAGCGGTTGCACTGCCGCCGCCCACCC
ACGCAGGGCATCTCATTCATCGCCGCCGCTGCCGCCTGACAACAGCTCAG
GACTGGTGATAGGCATGCGGCACAGCGCGTCGGTGCCGCACCTGCACCTG
CCGCCGACCGCAGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGAAGC
GGCGGCGGCGGCGGCAGGGGGCCGCGGTACAAGCCCCGCGCTGAATGGGC
TCGGCGGCGGCGGCGTGGAGCGCAGGGCAGCGGAGAGCGCAGATGTGGCG
GCGCAGATGCGGCGCTGCACGACGGCGCCCGGCGCGCTGCACCACGAGAC
GGACGCGCTGCCGCCGCAGCAGCACAAGCGACGCCGCTCAAGCGACGGCA
GCGACGCGGACGCCGCGGGCTCTCTCATTCTCATGGGCAATGGGGGTGGC
GCTGCCGCCGCCGCCGCGCGCGGCGGCATGGGCTGCGCCGGCGGCAGCAG
CGGCAGCCTCAGCAGCAGCGGCGGCATGATGGATGCGCCGTCGCCCCTGC
ACGGCGCGATGCCGCCGCCACAGTCGACCATGCCGTCCCCGGGTCTGTAC
CCGCAGCACGGCCCCGGGGGGAGCAGAGTTGCAGGCCAGCGGCCCATACG
CCCACGCATCAGCCTGCGCGTTGCGTCGGGGACGGCCGGCGGCGGCAGTG
GCGGAGCAGCAGCAGCAGCAGCGGCGGCGAATGCGGCGCCGAAGCTGCTG
CCCGCGCAGCAGCAGGCGCAGAAACCCGCGGTGACGGTGGCAGTGGGGGG
TGCGATGAACGGCGTGCAGCACTCGCAGTCGCAGCAGCTGCAGCCGCCGC
TCTTCAAGCGGCCCACGATCTCGCTCAGCGTGCGCAGGCACGGCGGCGGC
AGCAACGGCAGCACCCCTAGCAGTACCAGCAGCGGGCGGAGCTCCTCTAA
CGGCTTCGGGAACAGCGGCGGTGGCGGCGGCGCTGCGCAGTGCAGCGCGA
CCAGCTGGAGCCCGCCGCGCTCGCGTCCGTCGCCCGCTGGCAGCAGCAGC
GGCGGCGGCGCGGCGGCGGCGGTGCTGGCGGACGCGGCGCTCGTGGCGCG
GCTGGCGGCATTCCAGGACGGCGCGCCACGCGTCGCCATCGCGGCGAACG
CCGCGGCGCTGGCGGCGGCTGGCCACGCGTCGCTCGTGCGCGACCGCTGC
GCGCACGGCGAGCGCGTGGCGCCGAGCCGCGCGGCGCTGCCGCTGGCGGC
GCTCGGCGGCGGCGGCAGCGGCGGCGGCGGCGTGGCGCTGCTGGACGCGC
TGTACGACGCGGCGGGCGCGCGCGGCGGGAGCGGCGTGCTGACACTGCAG
GCGGCGGTGGCGCGCGGCGACGTCGCGGCGGCGCGCTGGGCACTAGAGCG
CTGCGACCGCGCGGCGGCGGCGGCGGCAGGCGTCGGGTGCGTGATCGCGG
CCGCGGCGCGCGGCGACGGCGCCATGCTGCAGGTGCGTGCGCGGCGCAGC
AGGGGCGTGTCGAGATGCCGCTGGCATGTCTAAGGCGGTGTTGCGGGTGA
CAGCGGCCCCCGAAACGCGAACGACATGCATCCTTGTTTCAACAGTACCT
CTGTAGAAGTACCAGACCCGACGGCTCACATGCGCTGGTCTCTACCGCGC
GACAGCAAGGTGCTGACTCACTCACGCCCGCCTTCGCTGTATTTAGCGCG
CTCCCAGCGCTGCCTGCACCGCTCACTATCACATCCGCACAGCTCACCGC
CGCGCTATCTTCACAGGCTCAGCTAAACCGCGCCCCACCTACTTTTTACC
GCACGCGGCTGCTGCCCTGCAGCGGCCCGCGTCCGCCTGCGTGCGTCCGC
GCTGCTCACTGCCACCGTTTGCGCGGCTCCGCACTGAGTTGCTGCTTGCT
GCCACGCGCTGTGCTGATGGCTGCTGCTGCGCGCGCAGTGGCTCGCATCA
TCCGGCGTGAGCACGCCCGCGGTGCCCAGGGCGCTGGAGGAGGCTGCGAA
GGGCGGGCACGTCGCCGCGGTGCACTGGCTGGTCACGCAGGTACGTACAG
TAGGTATGATGCTTCAATAGTCGGAGCTGGTGATGCTCAGGTCGCGCAGG
GGACAGGCACGTCGCCGCGGTGCACTGGCTGGTCTCGCAGGTGCGCACGT
ACAGTAGGTATGATGCCTCAATATTTGGAGCTGATGATGCTCAGCTCGCG
AAGGTGGCGGGCACGTCGCCGCGGTGCACTGGCTGGTCACGCAGGTGCGC
AAGGTATTGTGCCGCAGCAGTCGGAGTCAGTGATGCTCAATTCGTGAAGG
GCGGGCACGTCGCTGCTGTGCACTGGCTGGTCACACAGGTATGTACGGTA
TTGTGCTGCAGCAGTCGGAGTCGGTGATGCGCAGCTCGGCGCACTGGCTG
GTCACGCAGGTGCGGTATTGTGCTGCAGCAGTCGGAGTCGGTGATGCTCA
GCTTGTGAAGGGCGGGCACGTCGCCGCGGCAGTACGTATGATGAGGTATG
TACAGTAGGTACGATGCCTCAGCAGTCTGGTGTCAGCGTGTCAGCCCGTG
GCCTGTATTGGCCTGGCAGTGCAGGGGGGGGGGGGGGGGGGGGGGACGAT
CAACAGGTATCAGGTATGGCACGGCAGGAGGGCCGACGAGCGTTTTTATC
AGCGCTCAGCGACCTGCAGCTTCCCGCCAGTGCGACAGCGCAGCGGCGCG
CAGCAAGGCGTGCCCCTGCACCCCCTCTGACTGCAATGCCAGGGGTTTGA
GCGCCTCTGCCCGCCCATACCCTTTGCTCACCGCCCAGATCGTCACGCAT
CCCGCTCGCCACATGGGCACGCCAACAGCACAGCGCCACCGCTCACGTGC
CCCCCCCCCCCCCCCCCCTCAACCTCCCGCACGTCTGCGCAATCCTCACC
TTATCCCCCCTGCTCCTCTGATCCCTCATGTCTCGTCCCCTTGTCACCCT
CTCACTCGCCTTCTAATCCACCCCCCTCTCACTCCCCTTCCAATCCCTCC
CCGTCGCCCCGCCCCCCCCCATGCCCCCAATCGCAGGGCTGCATCCCCGA
CGCCGCCGCCATCAGCGCCGCCGCCGCCGCCGGCCACACAGCCGTTGTCC
ACAAGCTGCTGCTGCTCGCGGGCCCCACAGCAGCGCTCTCCCTCGGCAGC
GCGGCGCTCGCGGCGGCGTGCGGCGCAGGGCAGCTGGAGCTCGCGCGCTG
GCTGTGGGGCGTCGGCGGCGCGGCGCTGGATGCTGCGTCAGCTCTCAATG
CCGCGCTCGGCCGCGGCCAGTGGGAGGCCGCGCGGTTCCTGCTGCTGCGC
GCGGGGGAGGCGCTGGCGTAGCGCAGCGGGGGGCGGCGGCGGCGGAGGCG
GCGAGGCGCGGCGGCAGCAGTGCTCGATGTTGCGTCAGCGCTCAGCGCTG
CGCTCCGCCGCGGCCAGTGGGAGGCCGCGCGCTTCCTGCTGCTACGCGCG
AGGAGGCGCTGGCGTAGTGCAGTGGGGGCGGCGGCGGCGGAGGCGCACAA
CGCGGTAGCAGCAGTGCTCAACGCCGTGTCAGCGCTCAACGCCGCGCTCG
ACCGCGGCCAGCGGGAGGCCGCGCGCTTCCTGTTGCTGCGCGGACGGGAG
GCGCTGGCGTAGCGCAGCGGGGGCGGCGGCGGCAGAGGCGCGGAACGCGG
TGGCAGCAGTGCTCGACGCTGCGGCAGGGCTCAGCAACGCGTGTGCTGCT
GCGCGCGAGGGAGGCGCTGGCGTAGGCGCGCGCACTCACGGTGCGGCGGC
GGAGGTAGCGGACGCGGCAGCAGCAGTGCGCGACGCTGCGGCGGAGCTCA
GCGGCGGCGTGCGCTGCCGGCGGCGGGGGCAAGGAGGAGCGATTCGAGGC
GCTGCTGCTGCGGTGCGGGGCAGCTACCGGGCTGCGCGTGTGTGCACGCT
CGCAGCGGCAGCGGTCGCGCGGCGCTGCGTGGGCACTGGTGGCGGGCATG
CGCATGACCCGTAGCGCTCCCTGGCGTACTAGAAGAGCGTTGTGGCACCA
AACTTCAAGTGACGGCGTGGCGCGCGTGCGCAGCGCTCAGCACTGGGGGG
GGTTGAGGTGTGTCCCCCATATTGTCATGGAGGCCGCGGTGCCGCGCATC
GCATCAGTGCTCGAGCACTGAAAACAGTCAGACGGCTGGTTGTGTGCTGG
TGTTGTAGAAGGAAGGGAGTCGCCTGGGTGGAGGTGTGAAACCCGACAAA
CAGCAGCAGTGCTCGGGGCAGCAGCTGCAGCGCGGGGGGGGGGGGGAGTT
CAGGTTTGTGGCTCCTCCTCCCCACTACTTGAGCATGGCAGCTGCAGTCG
ACAACATGGACACTGAACGAAGGATCAACAAATTTACCGTAGCGAATGTA
CGGCAACTGTTACTTAGAGCGGTAGTGCGCAGGCACAGGCGGCGCCTTCT
GCTCGCGCTTGGTACGCGCGACGGCAGGCACGTGAAGCAGCGGAGCGGCA
TCAGCAGCGCAGCGGCGGCAGCGGCAGCGGCACCAGCGGCGGCGGCGCAG
CTCGACGGCTGCGGCTTATACCTACCCGTATACGCCGCGCGCTCTGTCAA
GCGGCAGCGCCCCGCAGCATCACCCGCGCACGCGGGCAACAGGCAACGTT
GCCCGCTGCGGCGGTTGAGCGCTGAGTTGCGCGCCCGCCACACACGCGCG
CGCATTTCCGTTCCCAACTGTATTCTTAGGCCCCCGTGGTGGCGCAGTGG
CCGCATGTGCACGTCAGGAGTTTGTGTGAGAATGCCCGCTTCACAGGGGT
GTGCTGTACTTGACGGGCGCGCGCCGGTTCCCTGCCCGCAGCCTGTGCGC
TCTCTGCACAGCTTGCGGCGCGGATGGGCACCGGGGGCGCGTTGCCTTGA
GAGGGGGTACACAATCACTGGCGTTGCACATTTGCTGTGCAATACGTCAG
AGTGTGCCGACCGCAGACTGTTTTGACAATGAACGATGCGTGCATAACTT
CGCGCCCTCTGCGGATTGTTTGCTGCTCAGCTGACTGTCGGTGTCTATCA
TGACCCCGTCCGATTGCATCGGGTTGAGCCAACGGCAGGTTTCTGTGCAA
GGCAGGCATGTGTTGCCGACACTGTTGCGAGGACATGACCACACATGCAC
AGAGACTTAGCAGGGGGGTTGCTGGGAAGGTTCTCCGGGAGTGCCTTCCG
GGAACTGTCCCGGGAGTGTGTGTATTCCACTTGGTTGCATCAGGCAAAAA
CATACCGACGACCAGCGATCGTCACGGATAGCGGCCGACAAAGCACTGCA
CAGCTGTCTATTTCCTCCCACACGCCGACCGAAACGCGCCAGCGTCTCCA
GCACGGCCGCAAACACAGAAATCGAAGATGCTCTCCCTCGCACAGGCAAC
GCGTTCCGCTTACCTGCGCCCGTGCGGCAGGCTGGTCGTCGTGCGGAACC
TGGAATCCCTCTACAGCAAGTCCAAATACCCTCCCACAGACGAGGATCCG
AAGGGAAAAGGCCCGCCAGCTGCAGGAGAAGCTCTCCCGGCAGCCGCTGA
AGGTGCGCTGACTGACCTGACAAAGAGCGTTCTGTCTTGCCCAGAACATC
ACCGTCTTCGCTCTTCCCTCTCGCCTGCCCATGAAGCCAGATTTGTGATT
GCATATCCAGCTTGCAGCAATGCTGCTGCACTGACGCGCAAGATGTGGTG
ATTCGGTCAGATTAATTTGAAGATCTGTCGCAACGTGAAAATGGTCGTGA
ATATGCCAAAGTCAATTTCTCGTGCTGCTGCTTCGTCAGGTGGTGCGAAT
GCCTCTCACAGGCCCTCCGCCGAGAGCGAAGAGAGGGACTCATTTTCCAA
GGCAGCCATTAGCGGCGGAGTCGAGGGTGCCCGCGAGAAGGTGGAGAAGG
GAACAGCACCAGGGGAGAAGGCGAAGGAGAAAGTGAGCTCTTTTCTTGCC
CTCCGCTGCCCCAGCCAGCGCATACTTCGAAACATACTACTATGAAACGG
GGCGCGGAAAGCTAAAGCGCGGTGCCTCGACTGCCTCTCGCAGCAGCGCA
CGTCACTGTTGGTAAAATTGAAGATACGGATGTCTTTCTAAGAGATGCCC
TGGCACTCAGCCATGCACTGACGCTGACCCTAGCTACACGCGCATCAGTA
GTGCACACAGGCAAAGCCGCACGGTGTACAGGATACAGATGCGAGTTCCC
GCTTCGGCTCGGAGCTGCATTCCTGACGCGCAAACGCAAACGCAATAAAT
GCAGCGCTAATTACGCAACACAGCCTTTGAGCCTGCACACAACAAAGCAT
ATCTGTTGGTCCGCAGGCTGAGTGCATAGGCATGCGTCGCTACATGGTGA
CTGCGGTTGCGCTGCAGCATCGCAAGTGGAGATGCTCTCAGAACTGTGTA
CACAACGTGAAAAAGGAATGTTCAGGAGAGAACGGCAGTGTGCTGTTCGT
GTTTGGGAAGGTGCTGATGTCAGGTGCCACAAGGGCCTGGGCCTGCATCT
CTGCAAACAATGCAACTTTTTATTCGTGCTAGCTTTGGGTGTGAAAAAGC
CCAGATGGTCAGTCCAGCTTGAAATCAGATGCTACATGACACTCATCAGA
AGCACACGTGTGAATATGTTCCGTTGTTCAGTACTCCCAAGCAACGACGA
CCAAGCTCTTACATTGTGCTCCTGAAACACTGTTTATAAATACTTTTGAA
TGAGTCCACTTGAATCTAAGGCATGTTGTGTCTGCTGCTGCATTGTCACT
CAGATGGAGGGACAACACAGCCATCCACACTGCGGAGATCGCCATGTACG
GCAGCAACAATGGTGTACAAGCTCTTGCCTCGTTTTCCTGAAACGCTTGC
GTCAATGAGTTCACTTGTAACCAGGGCATGTTGACTGCTGTTGCTTTGTC
GCTCAGATGGAGGACATGATCAACTCGGCCATCCACACTGTGGAGAAGGC
CATGCCAGGCAGCAACAAGGACCTGCCAGACAGGGACTTTACCCCGCCGC
CGCCCAAGAAGGGCAGCAGTTGAAGAAGTGGAGCGTTACACTTGAAGAAG
TGGAGCGCCACGCTTTACCATCAACAGGGCGCGAGCGATCTGACGTGGGG
TCTCAGGCGCGATGTTTGTGATATACTTAGTCCCCAGTACCTACCCTCCC
CAGCTTCCCGCGAGGTACTGAGGAGTGACTATATCGATCTGCGCAACCGT
AGTGACAGGGCTCGCGCGAGCGTGCTGCTGTAGAGCGGTGCTGCGTACGC
A back to topCoding sequence (CDS) from alignment at Contig_146:308143..315493+ >mRNA_16157 ID=mRNA_16157|Name=jgi.p|Trimin1|353155|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=3120bp|location=Sequence derived from alignment at Contig_146:308143..315493+ (Tribonema minus UTEX_B_3156 )
ATGCAAGCGCTGCTCTCGGATGGCTTCCAGGTCCTCAGTAGTGTCACATT
TGGCGCCACGGGCGAGATCATCAGCGAGCGTGGCACCGCCCACCACGGCA
GCAGCAACGGCGCCGGCGGCGGCGGCGGCGCAGCGGCGGCGGCGGCAGCG
GCGGGCAAGGGCAGCCGACCCCCAAGCGGTTGCACTGCCGCCGCCCACCC
ACGCAGGGCATCTCATTCATCGCCGCCGCTGCCGCCTGACAACAGCTCAG
GACTGGTGATAGGCATGCGGCACAGCGCGTCGGTGCCGCACCTGCACCTG
CCGCCGACCGCAGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGAAGC
GGCGGCGGCGGCGGCAGGGGGCCGCGGTACAAGCCCCGCGCTGAATGGGC
TCGGCGGCGGCGGCGTGGAGCGCAGGGCAGCGGAGAGCGCAGATGTGGCG
GCGCAGATGCGGCGCTGCACGACGGCGCCCGGCGCGCTGCACCACGAGAC
GGACGCGCTGCCGCCGCAGCAGCACAAGCGACGCCGCTCAAGCGACGGCA
GCGACGCGGACGCCGCGGGCTCTCTCATTCTCATGGGCAATGGGGGTGGC
GCTGCCGCCGCCGCCGCGCGCGGCGGCATGGGCTGCGCCGGCGGCAGCAG
CGGCAGCCTCAGCAGCAGCGGCGGCATGATGGATGCGCCGTCGCCCCTGC
ACGGCGCGATGCCGCCGCCACAGTCGACCATGCCGTCCCCGGGTCTGTAC
CCGCAGCACGGCCCCGGGGGGAGCAGAGTTGCAGGCCAGCGGCCCATACG
CCCACGCATCAGCCTGCGCGTTGCGTCGGGGACGGCCGGCGGCGGCAGTG
GCGGAGCAGCAGCAGCAGCAGCGGCGGCGAATGCGGCGCCGAAGCTGCTG
CCCGCGCAGCAGCAGGCGCAGAAACCCGCGGTGACGGTGGCAGTGGGGGG
TGCGATGAACGGCGTGCAGCACTCGCAGTCGCAGCAGCTGCAGCCGCCGC
TCTTCAAGCGGCCCACGATCTCGCTCAGCGTGCGCAGGCACGGCGGCGGC
AGCAACGGCAGCACCCCTAGCAGTACCAGCAGCGGGCGGAGCTCCTCTAA
CGGCTTCGGGAACAGCGGCGGTGGCGGCGGCGCTGCGCAGTGCAGCGCGA
CCAGCTGGAGCCCGCCGCGCTCGCGTCCGTCGCCCGCTGGCAGCAGCAGC
GGCGGCGGCGCGGCGGCGGCGGTGCTGGCGGACGCGGCGCTCGTGGCGCG
GCTGGCGGCATTCCAGGACGGCGCGCCACGCGTCGCCATCGCGGCGAACG
CCGCGGCGCTGGCGGCGGCTGGCCACGCGTCGCTCGTGCGCGACCGCTGC
GCGCACGGCGAGCGCGTGGCGCCGAGCCGCGCGGCGCTGCCGCTGGCGGC
GCTCGGCGGCGGCGGCAGCGGCGGCGGCGGCGTGGCGCTGCTGGACGCGC
TGTACGACGCGGCGGGCGCGCGCGGCGGGAGCGGCGTGCTGACACTGCAG
GCGGCGGTGGCGCGCGGCGACGTCGCGGCGGCGCGCTGGGCACTAGAGCG
CTGCGACCGCGCGGCGGCGGCGGCGGCAGGCGTCGGGTGCGTGATCGCGG
CCGCGGCGCGCGGCGACGGCGCCATGCTGCAGTGGCTCGCATCATCCGGC
GTGAGCACGCCCGCGGTGCCCAGGGCGCTGGAGGAGGCTGCGAAGGGCGG
GCACGTCGCCGCGGTGCACTGGCTGGTCACGCAGCAGTCGGAGTCGGTGA
TGCGCAGCTCGGCGCACTGGCTGGTCACGCAGGGCTGCATCCCCGACGCC
GCCGCCATCAGCGCCGCCGCCGCCGCCGGCCACACAGCCGTTGTCCACAA
GCTGCTGCTGCTCGCGGGCCCCACAGCAGCGCTCTCCCTCGGCAGCGCGG
CGCTCGCGGCGGCGTGCGGCGCAGGGCAGCTGGAGCTCGCGCGCTGGCTG
TGGGGCGTCGGCGGCGCGGCGCTGGATGCTGCGTCAGCTCTCAATGCCGC
GCTCGGCCGCGGCCAGTGGGAGGCCGCGCGGTTCCTGCTGCTGCGCGCGG
GGGAGGCGCTGGCCGCTGCGCTCCGCCGCGGCCAGTGGGAGGCCGCGCGC
TTCCTGCTGCTACGCGCGAGGAGGCGCTGGCGTAGTGCAGTGGGGGCGGC
GGCGGCGGAGGCGCACAACGCGGTAGCAGCAGTGCTCAACGCCGTGTCAG
CGCTCAACGCCGCGCTCGACCGCGGCCAGCGGGAGGCCGCGCGCTTCCTG
TTGCTGCGCGGACGGGAGGCGCTGGCCAACGCGTGTGCTGCTGCGCGCGA
GGGAGGCGCTGGCGTAGGCGCGCGCACTCACGGTGCGGCGGCGGAGGTAG
CGGACGCGGCAGCAGCAGTGCGCGACGCTGCGGCGGAGCTCAGCGGCGGC
GTGCGCTGCCGGCGGCGGGGGCAAGGAGGAGCGATTCGAGGCGCTGCTGC
TGCGGTGCGGGGCAGCTACCGGGCTGCGCGTGTGTGCACGCTCGCAGCGG
CAGCGGTCGCGCGGCGCTGCGTGGGCACTGGTGGCGGGCATGCGCATGAC
CCGCACGTGAAGCAGCGGAGCGGCATCAGCAGCGCAGCGGCGGCAGCGGC
AGCGGCACCAGCGGCGGCGGCGCAGCTCGACGGCTGCGGCTTATACCTAC
CCGTATACGCCGCGCGCTCTGTCAAGCGGCAGCGCCCCGCAGCATCACCC
GCGCACGCGGGCAACAGGCAACGTTGCCCGCTGCGGCGGCTGGTCGTCGT
GCGGAACCTGGAATCCCTCTACAGCAAGTCCAAATACCCTCCCACAGACG
AGGATCCGAAGGGAAAAGGCCCGCCAGCTGCAGGAGAAGCTCTCCCGGCA
GCCGCTGAAGGTGGTGCGAATGCCTCTCACAGGCCCTCCGCCGAGAGCGA
AGAGAGGGACTCATTTTCCAAGGCAGCCATTAGCGGCGGAGTCGAGGGTG
CCCGCGAGAAGGTGGAGAAGGGAACAGCACCAGGGGAGAAGGCGAAGGAG
AAAATGGAGGACATGATCAACTCGGCCATCCACACTGTGGAGAAGGCCAT
GCCAGGCAGCAACAAGGACCTGCCAGACAGGGACTTTACCCCGCCGCCGC
CCAAGAAGGGCAGCAGTTGA back to top
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