mRNA_16037 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|353945
Unique Name	mRNA_16037
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|353945 vs. uniprot
Match: A0A835Z5P5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5P5_9STRA)

HSP 1 Score: 762 bits (1968), Expect = 2.050e-275
Identity = 453/453 (100.00%), Postives = 453/453 (100.00%), Query Frame = 1

Query:    1 MLEAARRQQELQRRIKQTQAQLQEAKEENKRRGRYPKEKAAKVNALDAELKLLRSGVLPEEAQPPPKVSEAAALEAARASAVVQGRLAYPQLPPAGRHYDLELYDIIFDVAKALYGDKHHVLPDHQRTQQQPVISMDSESGLPATGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMLAVISLYFNNDSMAVFEPAARNLLNNTAAKVSDALAFAKGDCQELIKELNEVVKAGGYAEYEMTYDCSFKRAFWATKDQVEGAKEFGLDVIQQDITSSDHEGDRIDTVVLPGVLHMCGDPDFERKGVALDNCVCAPTAAKYCERGAAATVNGFAARSAEAYKRARYVAHFDAGRWVVVPFVQESFGRLGGAARAFIARLATHAAARAGGSERVVRRRRSVVRRHIVVALSAALARELAERILAYVRCAQMGGRAVRPVSSLLAAAR 1359
            MLEAARRQQELQRRIKQTQAQLQEAKEENKRRGRYPKEKAAKVNALDAELKLLRSGVLPEEAQPPPKVSEAAALEAARASAVVQGRLAYPQLPPAGRHYDLELYDIIFDVAKALYGDKHHVLPDHQRTQQQPVISMDSESGLPATGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMLAVISLYFNNDSMAVFEPAARNLLNNTAAKVSDALAFAKGDCQELIKELNEVVKAGGYAEYEMTYDCSFKRAFWATKDQVEGAKEFGLDVIQQDITSSDHEGDRIDTVVLPGVLHMCGDPDFERKGVALDNCVCAPTAAKYCERGAAATVNGFAARSAEAYKRARYVAHFDAGRWVVVPFVQESFGRLGGAARAFIARLATHAAARAGGSERVVRRRRSVVRRHIVVALSAALARELAERILAYVRCAQMGGRAVRPVSSLLAAAR
Sbjct:    1 MLEAARRQQELQRRIKQTQAQLQEAKEENKRRGRYPKEKAAKVNALDAELKLLRSGVLPEEAQPPPKVSEAAALEAARASAVVQGRLAYPQLPPAGRHYDLELYDIIFDVAKALYGDKHHVLPDHQRTQQQPVISMDSESGLPATGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMLAVISLYFNNDSMAVFEPAARNLLNNTAAKVSDALAFAKGDCQELIKELNEVVKAGGYAEYEMTYDCSFKRAFWATKDQVEGAKEFGLDVIQQDITSSDHEGDRIDTVVLPGVLHMCGDPDFERKGVALDNCVCAPTAAKYCERGAAATVNGFAARSAEAYKRARYVAHFDAGRWVVVPFVQESFGRLGGAARAFIARLATHAAARAGGSERVVRRRRSVVRRHIVVALSAALARELAERILAYVRCAQMGGRAVRPVSSLLAAAR 453

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BLAST of jgi.p|Trimin1|353945 vs. uniprot
Match: A0A836CFH1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFH1_9STRA)

HSP 1 Score: 303 bits (777), Expect = 1.530e-89
Identity = 161/176 (91.48%), Postives = 166/176 (94.32%), Query Frame = 1

Query:  832 IQQDITSSDHEGDRIDTVVLPGVLHMCGDPDFERKGVALDNCVCAPTAAKYCERGAAATVNGFAARSAEAYKRARYVAHFDAGRWVVVPFVQESFGRLGGAARAFIARLATHAAARAGGSERVVRRRRSVVRRHIVVALSAALARELAERILAYVRCAQMGGRAVRPVSSLLAAAR 1359
            + +DITSSDHEGDRIDTVVLPGVLHMCGDPDFERKGVALDNCVCAPTAAKYCERGAAATVNGFA RSAEAYKRARYV HFDA RWV+VPFVQESFGRLGGAARAFIARLA HAAAR GGSERVV RRRSV+RRHIVV LSAALA ELAER+LAYVRCAQM GRAVRPVSSLLAAAR
Sbjct:  844 LNEDITSSDHEGDRIDTVVLPGVLHMCGDPDFERKGVALDNCVCAPTAAKYCERGAAATVNGFATRSAEAYKRARYVGHFDAERWVMVPFVQESFGRLGGAARAFIARLAAHAAARVGGSERVVHRRRSVLRRHIVVTLSAALACELAERVLAYVRCAQMSGRAVRPVSSLLAAAR 1019

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BLAST of jgi.p|Trimin1|353945 vs. uniprot
Match: A0A836C8R9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8R9_9STRA)

HSP 1 Score: 215 bits (548), Expect = 1.760e-62
Identity = 110/123 (89.43%), Postives = 115/123 (93.50%), Query Frame = 1

Query:  832 IQQDITSSDHEGDRIDTVVLPGVLHMCGDPDFERKGVALDNCVCAPTAAKYCERGAAATVNGFAARSAEAYKRARYVAHFDAGRWVVVPFVQESFGRLGGAARAFIARLATHAAARAGGSERV 1200
            + +DITSSDHEGDRID VVLPG LHM GDPDFERKGVALDNCVCAPTAAKYCERGAAATVNGFAARSAEA+KRARYV HF+A RWVVVPFVQE+FGRLGGAARAFIARLA HAAAR GGSERV
Sbjct:   78 LNEDITSSDHEGDRIDMVVLPGALHMRGDPDFERKGVALDNCVCAPTAAKYCERGAAATVNGFAARSAEAHKRARYVGHFNAERWVVVPFVQETFGRLGGAARAFIARLAMHAAARVGGSERV 200

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BLAST of jgi.p|Trimin1|353945 vs. uniprot
Match: A0A836CEM9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEM9_9STRA)

HSP 1 Score: 203 bits (516), Expect = 1.760e-54
Identity = 116/126 (92.06%), Postives = 116/126 (92.06%), Query Frame = 1

Query:  982 YCERGAAATVNGFAARSAEAYKRARYVAHFDAGRWVVVPFVQESFGRLGGAARAFIARLATHAAARAGGSERVVRRRRSVVRRHIVVALSAALARELAERILAYVRCAQMGGRAVRPVSSLLAAAR 1359
            YCERGAAATVNGFAARSAEAYKRARYV HFDAGRWVVVPFVQESFGRLGGAARA IARLATHAAAR GGSERVVRRRRSVVRRH V ALSAA ARELAERI AYVR AQM GRAVRPVS LLAAAR
Sbjct:  555 YCERGAAATVNGFAARSAEAYKRARYVGHFDAGRWVVVPFVQESFGRLGGAARAVIARLATHAAARVGGSERVVRRRRSVVRRHFVGALSAAHARELAERIRAYVRSAQMSGRAVRPVSLLLAAAR 680

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BLAST of jgi.p|Trimin1|353945 vs. uniprot
Match: A0A835Z0Q7_9STRA (SWIM-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0Q7_9STRA)

HSP 1 Score: 138 bits (347), Expect = 2.220e-31
Identity = 68/95 (71.58%), Postives = 76/95 (80.00%), Query Frame = 1

Query:  565 AVISLYFNNDSMAVFEPAARNLLNNTAAKVSDALAFAKGDCQELIKELNEVVKAGGYAEYEMTYDCSFKRAFWATKDQVEGAKEFGLDVIQQDIT 849
            AV+SLYF  D  AVF+  A +LLNNTAAKV+D +AF  GDCQE IK+L  V KAGGYAEYE+  DCSFKRAFWAT+DQVE A EFGLDVIQQD T
Sbjct:    9 AVVSLYFGGDFAAVFDQPALHLLNNTAAKVADRIAFTTGDCQEFIKQLGAVQKAGGYAEYELADDCSFKRAFWATQDQVERAMEFGLDVIQQDCT 103

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BLAST of jgi.p|Trimin1|353945 vs. uniprot
Match: A0A836CA74_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA74_9STRA)

HSP 1 Score: 138 bits (347), Expect = 4.060e-31
Identity = 68/95 (71.58%), Postives = 76/95 (80.00%), Query Frame = 1

Query:  565 AVISLYFNNDSMAVFEPAARNLLNNTAAKVSDALAFAKGDCQELIKELNEVVKAGGYAEYEMTYDCSFKRAFWATKDQVEGAKEFGLDVIQQDIT 849
            AV+SLYF  D  AVF+  A +LLNNTAAKV+D +AF  GDCQE IK+L  V KAGGYAEYE+  DCSFKRAFWAT+DQVE A EFGLDVIQQD T
Sbjct:  134 AVVSLYFGGDFAAVFDQPALHLLNNTAAKVADRIAFTTGDCQEFIKQLGAVQKAGGYAEYELADDCSFKRAFWATQDQVERAMEFGLDVIQQDCT 228

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BLAST of jgi.p|Trimin1|353945 vs. uniprot
Match: A0A835Z7W2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7W2_9STRA)

HSP 1 Score: 136 bits (343), Expect = 1.450e-30
Identity = 67/95 (70.53%), Postives = 76/95 (80.00%), Query Frame = 1

Query:  565 AVISLYFNNDSMAVFEPAARNLLNNTAAKVSDALAFAKGDCQELIKELNEVVKAGGYAEYEMTYDCSFKRAFWATKDQVEGAKEFGLDVIQQDIT 849
            AV+SLYF  D  AVF+  A +LLNNTAAKV+D +AF  GDCQE IK+L  V KAGGYA+YE+  DCSFKRAFWAT+DQVE A EFGLDVIQQD T
Sbjct:  186 AVVSLYFGGDFAAVFDQPALHLLNNTAAKVADRIAFTTGDCQEFIKQLGAVQKAGGYAKYELADDCSFKRAFWATQDQVERAMEFGLDVIQQDCT 280

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BLAST of jgi.p|Trimin1|353945 vs. uniprot
Match: A0A836CGN3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGN3_9STRA)

HSP 1 Score: 108 bits (270), Expect = 3.810e-24
Identity = 63/69 (91.30%), Postives = 67/69 (97.10%), Query Frame = 1

Query:   19 RQQELQRRIKQTQAQLQEAKEENKRRGRYPKEKAAKVNALDAELKLLRSGVLPEEAQPPPKVSEAAALE 225
            RQQELQRRIK T+AQLQEAKEENKRRGRYP+EKAAKVNALDAELKLL+SGVLPEEA+ PPKVSEAAALE
Sbjct:   21 RQQELQRRIKLTEAQLQEAKEENKRRGRYPREKAAKVNALDAELKLLQSGVLPEEARAPPKVSEAAALE 89

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BLAST of jgi.p|Trimin1|353945 vs. uniprot
Match: A0A836CAW7_9STRA (MULE domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAW7_9STRA)

HSP 1 Score: 109 bits (272), Expect = 1.780e-21
Identity = 54/94 (57.45%), Postives = 65/94 (69.15%), Query Frame = 1

Query:  568 VISLYFNNDSMAVFEPAARNLLNNTAAKVSDALAFAKGDCQELIKELNEVVKAGGYAEYEMTYDCSFKRAFWATKDQVEGAKEFGLDVIQQDIT 849
            V+  +F  DS AVFEPAA   LNN AA+     AF+KGD +  I  LN+V   GGYAEY++  DC+F+RAFWAT +QVE A EFGLDVI QD T
Sbjct:   10 VLYHHFGGDSTAVFEPAAVQTLNNIAAEAKARAAFSKGDSKNFIAALNDVRATGGYAEYDLEEDCTFRRAFWATSEQVESANEFGLDVILQDCT 103

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BLAST of jgi.p|Trimin1|353945 vs. uniprot
Match: A0A836CI86_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI86_9STRA)

HSP 1 Score: 103 bits (257), Expect = 7.460e-20
Identity = 50/84 (59.52%), Postives = 60/84 (71.43%), Query Frame = 1

Query:  592 DSMAVFEPAARNLLNNTAAKVSDALAFAKGDCQELIKELNEVVKAGGYAEYEMTYDCSFKRAFWATKDQVEGAKEFGLDVIQQD 843
            D  AVF+  A N LNN AA V   LAF  GDC+E I  LN V   GGYA Y+++ DC+FKRAFWAT+++VE A EFGLDV+QQD
Sbjct:  181 DLTAVFDDQATNQLNNEAAAVRAKLAFTAGDCKEFIAALNTVAATGGYAAYDLSEDCTFKRAFWATREEVELAMEFGLDVVQQD 264

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|353945 vs. uniprot

BLAST of jgi.p|Trimin1|353945 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835Z5P5_9STRA	2.050e-275	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CFH1_9STRA	1.530e-89	91.48	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836C8R9_9STRA	1.760e-62	89.43	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CEM9_9STRA	1.760e-54	92.06	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]
A0A835Z0Q7_9STRA	2.220e-31	71.58	SWIM-type domain-containing protein n=1 Tax=Tribon...	[more]
A0A836CA74_9STRA	4.060e-31	71.58	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835Z7W2_9STRA	1.450e-30	70.53	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CGN3_9STRA	3.810e-24	91.30	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CAW7_9STRA	1.780e-21	57.45	MULE domain-containing protein n=1 Tax=Tribonema m...	[more]
A0A836CI86_9STRA	7.460e-20	59.52	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_198	contig	Contig_198:138251..144364 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|353945\|estExt_Genemark1.C_Ctg_1980025
Hectar predicted targeting category	other localisation
TranscriptId	354267
Track	FilteredModels1
ProteinId	353945

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353945	gene_16037	Tribonema minus UTEX_B_3156	gene	Contig_198 138251..144364 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353945	Trimin1\|353945\|estExt_Genemark1.C_Ctg_1980025	Tribonema minus UTEX_B_3156	polypeptide	Contig_198 138331..144364 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_16037_6	exon_16037_6	Tribonema minus UTEX_B_3156	exon	Contig_198 138251..138852 -
exon_16037_5	exon_16037_5	Tribonema minus UTEX_B_3156	exon	Contig_198 141171..141446 -
exon_16037_4	exon_16037_4	Tribonema minus UTEX_B_3156	exon	Contig_198 141995..142096 -
exon_16037_3	exon_16037_3	Tribonema minus UTEX_B_3156	exon	Contig_198 142466..142525 -
exon_16037_2	exon_16037_2	Tribonema minus UTEX_B_3156	exon	Contig_198 143157..143268 -
exon_16037_1	exon_16037_1	Tribonema minus UTEX_B_3156	exon	Contig_198 144075..144364 -

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_16037	UTR3_16037	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_198 138251..138330 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_16037	CDS_16037	Tribonema minus UTEX_B_3156	CDS	Contig_198 144075..144364 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_198:138251..144364-
coding sequence from alignment at Contig_198:138251..144364-

spliced messenger RNA

>mRNA_16037 ID=mRNA_16037|Name=jgi.p|Trimin1|353945|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1442bp|location=Sequence derived from alignment at Contig_198:138251..144364- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGTTGGAAGCTGCCAGACGGCAGCAGGAGCTGCAGCGTCGCATCAAGCA
GACACAGGCGCAGCTGCAGGAAGCCAAGGAGGAAAACAAACGGCGGGGAC
GGTATCCGAAGGAAAAGGCTGCGAAAGTAAACGCGCTGGATGCGGAGCTA
AAGTTGCTGCGCAGCGGAGTGCTGCCGGAGGAGGCGCAGCCACCGCCTAA
GGTGTCAGAGGCTGCTGCTCTGGAAGCTGCCCGCGCCTCCGCTGTTGTTC
AAGGCAGGCTGGCTTATCCCCAGCTCCCTCCAGCCGGCAGGCACTACGAC
CTGGAGCTGTACGACATCATCTTCGATGTTGCCAAAGCCCTCTACGGGGA
TAAACACCACGTGCTGCCGGATCACCAGCGCACTCAGCAGCAGCCTGTGA
TCAGCATGGACTCTGAGAGCGGCCTGCCCGCAACAGGGCAGCAGCAACAG
CAGCAGCAGCAGGTGGTGTTGATGCTGCTGCTGCTGCTGCTGCTGCTGCT
GCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGC
TGCTGGACATGCTGGCTGTAATTAGTCTCTACTTCAACAACGACTCCATG
GCAGTCTTCGAGCCTGCTGCCCGCAACCTCCTCAACAACACAGCAGCTAA
GGTCTCAGATGCGCTCGCCTTCGCCAAAGGCGACTGCCAAGAGCTCATCA
AAGAGCTCAACGAGGTGGTGAAAGCAGGGGGGTACGCGGAGTACGAGATG
ACGTATGACTGCTCATTCAAACGCGCTTTTTGGGCGACGAAAGACCAAGT
GGAGGGTGCGAAGGAGTTTGGGTTGGACGTCATCCAACAGGACATCACGT
CCTCTGATCACGAGGGCGACCGCATCGATACGGTGGTCCTTCCTGGCGTC
CTACACATGTGTGGCGACCCTGACTTTGAGCGCAAAGGCGTGGCGCTTGA
CAACTGCGTGTGTGCACCTACTGCCGCCAAGTACTGCGAGCGTGGGGCGG
CCGCAACGGTCAATGGATTTGCGGCGCGCTCGGCGGAGGCGTACAAACGC
GCGCGGTACGTGGCGCACTTCGACGCCGGACGGTGGGTGGTGGTGCCCTT
TGTTCAAGAGTCCTTCGGGCGCTTGGGTGGCGCCGCACGCGCGTTCATCG
CACGTTTGGCAACGCATGCCGCTGCGCGTGCGGGCGGCAGCGAGCGTGTG
GTGCGTCGGCGACGGAGCGTGGTGCGCCGGCACATTGTTGTCGCCCTGTC
TGCTGCGCTCGCGCGCGAGCTGGCAGAGCGTATTCTCGCGTACGTGCGCT
GCGCGCAGATGGGCGGTCGGGCGGTGCGCCCGGTGTCGTCGCTACTGGCG
GCGGCGCGCTGAGTGACTGTAGCATATGCAGAGTTGATGATGTTGTTGCA
CGATTTGCGCACAAGCCACATGGGGCCGCCCATAATTAATAA

protein sequence of jgi.p|Trimin1|353945

>Trimin1|353945|estExt_Genemark1.C_Ctg_1980025 ID=Trimin1|353945|estExt_Genemark1.C_Ctg_1980025|Name=jgi.p|Trimin1|353945|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=454bp
MLEAARRQQELQRRIKQTQAQLQEAKEENKRRGRYPKEKAAKVNALDAEL
KLLRSGVLPEEAQPPPKVSEAAALEAARASAVVQGRLAYPQLPPAGRHYD
LELYDIIFDVAKALYGDKHHVLPDHQRTQQQPVISMDSESGLPATGQQQQ
QQQQVVLMLLLLLLLLLLLLLLLLLLLLLLLLLLLDMLAVISLYFNNDSM
AVFEPAARNLLNNTAAKVSDALAFAKGDCQELIKELNEVVKAGGYAEYEM
TYDCSFKRAFWATKDQVEGAKEFGLDVIQQDITSSDHEGDRIDTVVLPGV
LHMCGDPDFERKGVALDNCVCAPTAAKYCERGAAATVNGFAARSAEAYKR
ARYVAHFDAGRWVVVPFVQESFGRLGGAARAFIARLATHAAARAGGSERV
VRRRRSVVRRHIVVALSAALARELAERILAYVRCAQMGGRAVRPVSSLLA
AAR*

mRNA from alignment at Contig_198:138251..144364-

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_16037 ID=mRNA_16037|Name=jgi.p|Trimin1|353945|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6114bp|location=Sequence derived from alignment at Contig_198:138251..144364- (Tribonema minus UTEX_B_3156 )
ATGTTGGAAGCTGCCAGACGGCAGCAGGAGCTGCAGCGTCGCATCAAGCA
GACACAGGCGCAGCTGCAGGAAGCCAAGGAGGAAAACAAACGGCGGGGAC
GGTATCCGAAGGAAAAGGCTGCGAAAGTAAACGCGCTGGATGCGGAGCTA
AAGTTGCTGCGCAGCGGAGTGCTGCCGGAGGAGGCGCAGCCACCGCCTAA
GGTGTCAGAGGCTGCTGCTCTGGAAGCTGCCCGCGCCTCCGCTGTTGTTC
AAGGCAGGCTGGCTTATCCCCAGCTCCCTCCAGCCGGCAGGTATGCTTTT
TGTTTTCTTAATAGGTGCCTTGTTTGCCGCTTGAGATGTACATTGGCAGT
GTATGTGCTCTGGTGTTTACTTCAAGTTGGTGCTATGGCTCTTTTCAGCT
GAACAAAATGTAATGTGTGATTGTTGCAGGCCTCGAAAGCCAGTCGCAGC
GACCGCCACCGCAGACACTGCGCCGGCGGTAACGCCACCAGCAGCAGCGT
GCGCAAGCACTGGTGCAGTACACTGTGACCCTGATGCGAGCGATGACGAT
GACGATAGCTCTGGAAATGACGCCGCCGTGGCGGGCAAGCGGTACTATTC
AATCAGCACCCACCAGGAACTCTTCATCACGCGGAAACTAGCAGCAGCCA
AGCACAGCAGACTTCGAGTTGCTGTTTTTTTGTATTTGTGTGGAGTGCAG
TAGCACGCCTGTACACAATGTCATGCTATTGCTGTGGCATAAATATAATT
ATGCATGTGGGCTATTGGTAAGCATTCATGCAAAGTGTGCCATGAGCTGC
ATTGCCTTTGGCTGCCATGTTCAATTCTTTATGCGGGCTATTGGTAAGCA
TTCATGCAAAGTGTGCCATGAGCTGCATCGCCATTGGCTGCCATGTACTT
GAAGTTGAATTTGCGCTTTGAGTGTGTGTTAATTACTCTGCTCAATGTCC
TTTGCACGCAAATCATATATGCAGGCGATTGTGGCAGGTGCAGCTGCAGC
AAGTCCAAGGTGGCTCGAAAGTGTGATGAACACCTTTGACTTCAGGTGGT
GCGTCAAGGCACTACTACGTGCAGGGCTACTGCCCGCTTGGGTCAGGCAC
TACGACCTGGAGCTGTACGACATCATCTTCGATGTTGCCAAAGCCCTCTA
CGGGGATAAACACCACGTGCTGCCGGATCACCAGCGCACTCAGCAGCAGC
CTGTGATCGTGAGACATGGCATGCACTTCGCACTGGAGCACCAACGCCAG
CAGATTCAGTTGCAGCGGCAGCAGCAGCAACGTGAGCCTGCCAGCATTGC
AACTGGCCATACCGCTGGAGTAGACGAACCAGCGGGCGCCAGTACTGCGC
CAGGTGACATGTCTTGTGGGGTGCGATGGGTTACTCAGCAGCTGGGTGTA
CCACATCTCAGCGCACCACGATCTACTGGTGAGGTGCAACAAATTATCAG
TGGCGGCCTTGGTCCAGAAGTGTTCTTCCACAACCCTGCAGCGCTGGCTT
CACATGCTATGTCAGCTGGCATACTGATGCCAGAGACATCTGCTGCCAAC
TTCTCGCGAAGTGTGGTACGTGATGCAGCAGCATGGCAAGTGCTGCACAC
GCAGTACCAAAAGTTGCAGCGCAGACTGCGTGACGAGCCCATTGCAGTCG
TGCCGCCCATGATGGGCAACACCACTCCGCTGCCCCGGGCCAGCACGGAG
GGAGCCCATATTTGTGCCCCGCGGGCACAAATAGTTATTTGTGCCCGGGG
GCTCGAACCCCCACCAAGTGCACACTTGAAGTGCATTTGGGCAGCAGTTG
TTGTGTTGCAGCAACAGCGTTAGTAGCGCCGGCATGGAGAGCATGGACTC
TGAGAGCGGCCTGCCCGCAACAGGGCAGCAGCAACAGCAGCAGCAGCAGG
TGAGAGGGGAGGCCGGTTTTTTGTTCAGATAAGCTCTTGAGAAAAGTGTG
CGTGCAATGAGTTGCCGCCGCTGCCTTCTGCTGCCCGCTGTGTCTGCTGC
CGCTGTTGCTGTGGCCTGTGCCTGCTGTTGCTGGTTAGGCGATGTTCTCG
TGGTGGTGCATCCCCTCCTGTGTTGTGCACCGCCAATTTCAAAGCAGTTC
TCGAAAGTGATACTGGCAGTTGGTCCCTTTGATGTGTACAATAGTCCCGC
GGCCCCGCGGCTGCTGTTGCTGACTTTGCTGATCAAGCTGCGTTTTCCAT
GGCAGTGTATTGCTCCCTGCGTGTCAGCTGTAAATGTCAGTGGCTGTCGT
GGCAGTTGGTCCCAGCAGGTGGTGTTGATGCTGCTGCTGCTGCTGCTGCT
GCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGC
TGCTGCTGCTGGACATGCTGGTGCTGATTTCTCAACTGATTGTGATATTC
CCCTATCTTTCGTGTCACAGGCGTTCACTGAGCTTCTAGGCAAACGCTTT
GCTACTGCTCAAGAAGCGTTGAGCGCTGTCGAACCACTGGCTGCCGGTGC
TGGCTTCGTCGCCCAGATGAGAAACAAGCACCCAGGCGACTTCGATATCT
TCTGCAGCCGTGCAGGCAAACCCACTCCCAAGTTGTCAGATGCCCTCCCC
GGTATACGAGCCCGCAAAGCCAAGCCTTGCATCAAGTGCGATTGTAAATG
GCGCTTGAAAGTAGTGGTGGAGGCAGCAGCTGTAGAGAACACACAGCATG
CCAACAGTGGGCCGGAGTGGCGTATTGCCCTACCCATCAGCAACCCCCCA
GCTTCGTTCAGCAAGGGCCACAACCATGGCCCGGCCGTGTCTGCAAAGTT
ACATCGACCTGCCAACGTTGGGCGCATCATCACCAAAGCAGAGCTCACAG
AGGACATAATCGCCAACGTGAAACTCTTGTGCCGCGCACCAAACATGCGT
GGCCGGACGCTGCACCAGGCTGTAATTAGTCTCTACTTCAACAACGACTC
CATGGCAGTCTTCGAGCCTGCTGCCCGCAACCTCCTCAACAACACAGCAG
CTAAGGTCTCAGATGCGCTCGCCTTCGCCAAAGGCGACTGCCAAGAGCTC
ATCAAAGAGCTCAACGAGGTGGTGAAAGCAGGGGGGTACGCGGAGTACGA
GATGACGTATGACTGCTCATTCAAACGCGCTTTTTGGGCGACGAAAGACC
AAGTGGAGGGTGCGAAGGAGTTTGGGTTGGACGTCATCCAACAGGTAAGG
CATAGATGGGACATAGACATGCAACCTCATGCCCCCCTGATGCCTTTGCA
GGCATGCTTCCTTGTGCTGCACTGATGTACACATCATGAAGGCAACTACA
CACACAATTTTAGCAGCAACAGAAGTGCACATGCTGCACATCAGATGGTG
CTTAGATGTTGCACTCCGCAAAATGAAGAGGCATGACATCACCACAGATC
CAGATGTCAGTCTTGCGCGCTCAGAGCATCATTTCATGTGGCACTCGGTG
CATGCCAGCGCGTCCTCGCACGAGGCTTCCACTTGTTTTTATTTTGTGTA
CTTAAGATCCATCTCACACAACAATGCAGAATCCATAGTAATGTGCCAAA
GTGTCACATGCACCAGGAACCCAAATGATTACCGATGTGTGCGGTATGGT
GCATGTACAATGATATGCGGCAGCATATTTGCGCAACCATTTGCATGTAC
TCTGATTCCATATAGCATGACAGTTACTTGGCCCGACCAGACCACTGCAA
ATTGCCTTTGCCCCAGAAACTGCATCATGACAAGCATATCATATGCGGCA
TGCTTGTTATGCCAATTGTCATGTCATGTACATCATGAGCTGACCATGCT
GTATGCGCTCGCCGTATGCAGGATTGCACTTTCGGGACCAACAAATACTT
GCTGCCGCTCAGCATCATCATCGGGGTGAATGGCAACGGCAAGTGAGTGT
CAATTTCAAACCATGCAAGTTGCCAGCACGGGCACTCAACTTGAACCGTA
CCTCATTATGCAGTCTCTTCACATGGAACGCGCGTCGTCATTTTGTCAGG
CTGTTTCAATGACCACTGACATGCTGACATGCTGCTCCTCCTGCCACTGG
TTTCTTGGCTGCCTGCTTCCAGGACGCGGTTGTTTTGCCAGGCAGTACTG
GCCTCTGAGGGCACAGAGACTTTCACCTGGTTCTTCATGCACTACGTGAG
CATGGTTGGTGGTCACCATCCCAGCGTGTGCTTCACGGACAGGTAGACAA
GTTCTGAGGCAGCATGAGACGTGCAACCTTTCACTCCAGCAATTGTCCTG
AGTTGTGGCTTGCACGCATGAAAACGTACAAGGAGTGCATATGGCTTCTC
ACGCAAGCAAGCAAGCTTCTTTGTACCATTGCAACCACAGGGTTGTTGCT
GAGCGCTCGCTAGCGAATTATGCAAATGTATACATGTCATCTCGTATATG
CTTATGGCGCTATGCGCTGCATTTCTACATGGTTGCAGGGACTATGCGGC
AGAGGCAGCCATGACATTGGCTTGGCCTGGCACTGTCCACCTCATTTGTG
AGTGGCATTTCATCAAGAACGCAAAGGAGAAGCTGAAGGGGAAGCTCGGG
GATGCATGGAAGGCAAGTTCGGGCCGCCTGCATCACTATTGTCAACATCC
CTGTGCAAGTGGCATCACCAATTACTATCATTGCAGCTTATGAGGCAGCA
ATCAAGCAACCTGCCAACGATACATTGATATCGGAATGCAAGTATAGTGG
AAATGCCGCCACTGCTGGATGCCACTTGCACTGCAGCTAGCAATGTCACC
CGCAAAGCGCTGAACAGGCGCCTTTTGACATGACGTGTTCGGGTCTCCTT
AGCCCATGACCAGGAGCAGGAAGCAAGTCCTCCTTTGCGTCATCATATGG
ACATGAAGCGCAGCTATGTGTTCAATGCCATTTTCTTGCGGTGGTCAATC
ATTTTTGCGCTTTGCTATGATATCTCTGGCCATGAGTATGCTTAGCATGG
AATGCTGAAACCGCAAGCTTGTGTGTCACTGACAGTGTCATGAGCTCACG
TACTTGTTTATGTTTGATATACATGTATGCTGTAACTTAAAACTCCTGGC
ATGCAGAGCAGTGCCAGCAGCTGTGCACAATACCTGTTGCTGTGGTGCAG
TTGTTTGCGGCAAGAGAAACCTGCTTGTATTTCATCATGTGCAACACTGT
GGGCTGCTGTATACCCGCTCATGCAGGGGAACATCTCTTGTTGTGTGCAT
GCAGTTTGAGCGCATCTACTGCATGGGCTAACATACCGGTGCAAAACTTG
CATGACGTGCCGGACAACTGTGTTGCAGCTGAAACACAGGCTGCTTGCAT
ACCATAATCAAACTGATATCCCCATGTGGCGATTGACAACACAGGTGCAT
ACTTTTGGTTATGTTCTCGGCCGCATGCGGGGCATGCTCATTCGGTGTGT
GTGAAGTCTTTTCTGCTTGCATCCAGTACAGATAGGGTGTAGAAGCATCA
CGCACAAGCGCTGCCTGCAGCGGCTCTTGCGGTCGTGTGGTGCGCCATAC
TTCCTCAACGAGGACATCACGTCCTCTGATCACGAGGGCGACCGCATCGA
TACGGTGGTCCTTCCTGGCGTCCTACACATGTGTGGCGACCCTGACTTTG
AGCGCAAAGGCGTGGCGCTTGACAACTGCGTGTGTGCACCTACTGCCGCC
AAGTACTGCGAGCGTGGGGCGGCCGCAACGGTCAATGGATTTGCGGCGCG
CTCGGCGGAGGCGTACAAACGCGCGCGGTACGTGGCGCACTTCGACGCCG
GACGGTGGGTGGTGGTGCCCTTTGTTCAAGAGTCCTTCGGGCGCTTGGGT
GGCGCCGCACGCGCGTTCATCGCACGTTTGGCAACGCATGCCGCTGCGCG
TGCGGGCGGCAGCGAGCGTGTGGTGCGTCGGCGACGGAGCGTGGTGCGCC
GGCACATTGTTGTCGCCCTGTCTGCTGCGCTCGCGCGCGAGCTGGCAGAG
CGTATTCTCGCGTACGTGCGCTGCGCGCAGATGGGCGGTCGGGCGGTGCG
CCCGGTGTCGTCGCTACTGGCGGCGGCGCGCTGAGTGACTGTAGCATATG
CAGAGTTGATGATGTTGTTGCACGATTTGCGCACAAGCCACATGGGGCCG
CCCATAATTAATAA

Coding sequence (CDS) from alignment at Contig_198:138251..144364-

>mRNA_16037 ID=mRNA_16037|Name=jgi.p|Trimin1|353945|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1362bp|location=Sequence derived from alignment at Contig_198:138251..144364- (Tribonema minus UTEX_B_3156 )
ATGTTGGAAGCTGCCAGACGGCAGCAGGAGCTGCAGCGTCGCATCAAGCA
GACACAGGCGCAGCTGCAGGAAGCCAAGGAGGAAAACAAACGGCGGGGAC
GGTATCCGAAGGAAAAGGCTGCGAAAGTAAACGCGCTGGATGCGGAGCTA
AAGTTGCTGCGCAGCGGAGTGCTGCCGGAGGAGGCGCAGCCACCGCCTAA
GGTGTCAGAGGCTGCTGCTCTGGAAGCTGCCCGCGCCTCCGCTGTTGTTC
AAGGCAGGCTGGCTTATCCCCAGCTCCCTCCAGCCGGCAGGCACTACGAC
CTGGAGCTGTACGACATCATCTTCGATGTTGCCAAAGCCCTCTACGGGGA
TAAACACCACGTGCTGCCGGATCACCAGCGCACTCAGCAGCAGCCTGTGA
TCAGCATGGACTCTGAGAGCGGCCTGCCCGCAACAGGGCAGCAGCAACAG
CAGCAGCAGCAGGTGGTGTTGATGCTGCTGCTGCTGCTGCTGCTGCTGCT
GCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGC
TGCTGGACATGCTGGCTGTAATTAGTCTCTACTTCAACAACGACTCCATG
GCAGTCTTCGAGCCTGCTGCCCGCAACCTCCTCAACAACACAGCAGCTAA
GGTCTCAGATGCGCTCGCCTTCGCCAAAGGCGACTGCCAAGAGCTCATCA
AAGAGCTCAACGAGGTGGTGAAAGCAGGGGGGTACGCGGAGTACGAGATG
ACGTATGACTGCTCATTCAAACGCGCTTTTTGGGCGACGAAAGACCAAGT
GGAGGGTGCGAAGGAGTTTGGGTTGGACGTCATCCAACAGGACATCACGT
CCTCTGATCACGAGGGCGACCGCATCGATACGGTGGTCCTTCCTGGCGTC
CTACACATGTGTGGCGACCCTGACTTTGAGCGCAAAGGCGTGGCGCTTGA
CAACTGCGTGTGTGCACCTACTGCCGCCAAGTACTGCGAGCGTGGGGCGG
CCGCAACGGTCAATGGATTTGCGGCGCGCTCGGCGGAGGCGTACAAACGC
GCGCGGTACGTGGCGCACTTCGACGCCGGACGGTGGGTGGTGGTGCCCTT
TGTTCAAGAGTCCTTCGGGCGCTTGGGTGGCGCCGCACGCGCGTTCATCG
CACGTTTGGCAACGCATGCCGCTGCGCGTGCGGGCGGCAGCGAGCGTGTG
GTGCGTCGGCGACGGAGCGTGGTGCGCCGGCACATTGTTGTCGCCCTGTC
TGCTGCGCTCGCGCGCGAGCTGGCAGAGCGTATTCTCGCGTACGTGCGCT
GCGCGCAGATGGGCGGTCGGGCGGTGCGCCCGGTGTCGTCGCTACTGGCG
GCGGCGCGCTGA