mRNA_16021 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|353939
Unique Name	mRNA_16021
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|353939 vs. uniprot
Match: A0A835Z4B4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4B4_9STRA)

HSP 1 Score: 825 bits (2132), Expect = 1.560e-292
Identity = 576/576 (100.00%), Postives = 576/576 (100.00%), Query Frame = 1

Query:    1 MAEEPEAVWKLQMGSKTGGHNIGIFEPGYVTRAGGQKEAPAAMTPLFHDTDYCEKPVYMWKEREPETWSDDXXXXXXXXXKLGAFDRPKPKGARSKTRQDDAGYHAKSCSTAEVMMPLFPSLEDQWRRVQWHMEDARPPPHNMHFVGDRKEQASKYVLFEVQDNEEEAVIKVIPVDEWWRFTKAAREVKMTVKEAMEKMKKQQRGYISGNRALEAVLTATEDARTGEGDDSALTLDSDAKASRKKAAAPKVAARAYAPKDEASDXXXXXXXXXXSGPEGGEPNEAEPGGDAARKPAKKRGEEGGIDFDQPNAGAXXXXXXXXXXXXXXXXXXXXXQVFSDDDAELQDXXXXXXXXXXXXXNADVGLDSSEDETEEVKEGEAAGQKLLDKALEGGGEEXXXXXXXXXXELAGQGAGXXXXXXXXXXXXXXXEDDYTVSGTYKARMAARASPVPSETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGALALTQENMILVLRRAGGKMTSKKLLSAFRHELQRDKANRALFKQLLQALVTGVDDALEGKVYKLKDIWMT 1728
            MAEEPEAVWKLQMGSKTGGHNIGIFEPGYVTRAGGQKEAPAAMTPLFHDTDYCEKPVYMWKEREPETWSDDXXXXXXXXXKLGAFDRPKPKGARSKTRQDDAGYHAKSCSTAEVMMPLFPSLEDQWRRVQWHMEDARPPPHNMHFVGDRKEQASKYVLFEVQDNEEEAVIKVIPVDEWWRFTKAAREVKMTVKEAMEKMKKQQRGYISGNRALEAVLTATEDARTGEGDDSALTLDSDAKASRKKAAAPKVAARAYAPKDEASDXXXXXXXXXXSGPEGGEPNEAEPGGDAARKPAKKRGEEGGIDFDQPNAGAXXXXXXXXXXXXXXXXXXXXXQVFSDDDAELQDXXXXXXXXXXXXXNADVGLDSSEDETEEVKEGEAAGQKLLDKALEGGGEEXXXXXXXXXXELAGQGAGXXXXXXXXXXXXXXXEDDYTVSGTYKARMAARASPVPSETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGALALTQENMILVLRRAGGKMTSKKLLSAFRHELQRDKANRALFKQLLQALVTGVDDALEGKVYKLKDIWMT
Sbjct:    1 MAEEPEAVWKLQMGSKTGGHNIGIFEPGYVTRAGGQKEAPAAMTPLFHDTDYCEKPVYMWKEREPETWSDDXXXXXXXXXKLGAFDRPKPKGARSKTRQDDAGYHAKSCSTAEVMMPLFPSLEDQWRRVQWHMEDARPPPHNMHFVGDRKEQASKYVLFEVQDNEEEAVIKVIPVDEWWRFTKAAREVKMTVKEAMEKMKKQQRGYISGNRALEAVLTATEDARTGEGDDSALTLDSDAKASRKKAAAPKVAARAYAPKDEASDXXXXXXXXXXSGPEGGEPNEAEPGGDAARKPAKKRGEEGGIDFDQPNAGAXXXXXXXXXXXXXXXXXXXXXQVFSDDDAELQDXXXXXXXXXXXXXNADVGLDSSEDETEEVKEGEAAGQKLLDKALEGGGEEXXXXXXXXXXELAGQGAGXXXXXXXXXXXXXXXEDDYTVSGTYKARMAARASPVPSETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGALALTQENMILVLRRAGGKMTSKKLLSAFRHELQRDKANRALFKQLLQALVTGVDDALEGKVYKLKDIWMT 576

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|353939 vs. uniprot

BLAST of jgi.p|Trimin1|353939 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835Z4B4_9STRA	1.560e-292	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_198	contig	Contig_198:54056..63197 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|353939\|estExt_Genemark1.C_Ctg_1980006
Hectar predicted targeting category	other localisation
Ec32 ortholog description	Transcription Factor IIF, Rap30/Rap74, interaction
Ec32 ortholog	Ec-16_003310.1
TranscriptId	354261
Track	FilteredModels1
ProteinId	353939

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353939	gene_16021	Tribonema minus UTEX_B_3156	gene	Contig_198 54056..63197 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353939	Trimin1\|353939\|estExt_Genemark1.C_Ctg_1980006	Tribonema minus UTEX_B_3156	polypeptide	Contig_198 54840..63197 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_16021_10	exon_16021_10	Tribonema minus UTEX_B_3156	exon	Contig_198 54056..55277 -
exon_16021_9	exon_16021_9	Tribonema minus UTEX_B_3156	exon	Contig_198 56370..56438 -
exon_16021_8	exon_16021_8	Tribonema minus UTEX_B_3156	exon	Contig_198 56539..56721 -
exon_16021_7	exon_16021_7	Tribonema minus UTEX_B_3156	exon	Contig_198 56857..56889 -
exon_16021_6	exon_16021_6	Tribonema minus UTEX_B_3156	exon	Contig_198 57966..58046 -
exon_16021_5	exon_16021_5	Tribonema minus UTEX_B_3156	exon	Contig_198 58287..58552 -
exon_16021_4	exon_16021_4	Tribonema minus UTEX_B_3156	exon	Contig_198 60374..60521 -
exon_16021_3	exon_16021_3	Tribonema minus UTEX_B_3156	exon	Contig_198 61387..61519 -
exon_16021_2	exon_16021_2	Tribonema minus UTEX_B_3156	exon	Contig_198 62358..62421 -
exon_16021_1	exon_16021_1	Tribonema minus UTEX_B_3156	exon	Contig_198 62882..63197 -

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_16021	UTR3_16021	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_198 54056..54839 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_16021	CDS_16021	Tribonema minus UTEX_B_3156	CDS	Contig_198 62882..63197 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_198:54056..63197-
coding sequence from alignment at Contig_198:54056..63197-

spliced messenger RNA

>mRNA_16021 ID=mRNA_16021|Name=jgi.p|Trimin1|353939|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2515bp|location=Sequence derived from alignment at Contig_198:54056..63197- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGGAGGAGCCGGAAGCCGTCTGGAAGCTGCAAATGGGCAGCAAGAC
GGGAGGGCACAACATAGGCATTTTTGAACCGGGCTATGTTACCCGTGCTG
GCGGGCAGAAGGAGGCCCCGGCAGCCATGACTCCCCTGTTCCATGACACG
GACTACTGCGAGAAGCCTGTGTACATGTGGAAGGAGCGGGAGCCGGAGAC
ATGGAGTGACGATGAGGATGAGGAGAAGAAGGAGAAGGAGAAGCTGGGGG
CATTTGACAGGCCAAAGCCGAAGGGAGCACGCAGCAAAACAAGGCAAGAT
GATGCTGGATACCATGCAAAGAGCTGCAGCACAGCAGAGGTCATGATGCC
GCTGTTCCCTTCGTTGGAGGACCAATGGAGGCGCGTGCAGTGGCACATGG
AGGATGCGCGGCCGCCGCCGCACAACATGCACTTTGTGGGGGACAGGAAG
GAGCAGGCGTCTAAGTACGTGCTGTTTGAGGTGCAAGACAATGAGGAGGA
AGCGGTCATCAAGGTGATTCCCGTAGATGAATGGTGGCGCTTCACCAAGG
CAGCTCGCGAGGTCAAGATGACCGTCAAGGAGGCCATGGAGAAGATGAAG
AAGCAGCAGCGGGGGTACATTTCTGGGAACAGGGCGCTGGAAGCAGTGCT
CACAGCCACAGAGGACGCGCGCACTGGCGAAGGCGACGACAGCGCGCTCA
CCCTCGACAGCGACGCCAAGGCCTCCAGGAAAAAGGCGGCGGCGCCCAAG
GTTGCGGCGCGCGCTTATGCCCCTAAGGACGAGGCCTCCGATCCCGAAGA
CCGCGCCAGCGAGGCCGAGGAGAGTGGGCCGGAGGGGGGGGAGCCGAATG
AGGCGGAGCCGGGGGGGGATGCGGCCAGGAAGCCGGCGAAGAAGCGGGGG
GAGGAGGGCGGCATCGACTTTGACCAGCCCAATGCCGGGGCGGGGGGCGA
CGCGGCCAGGAAGCCAGTCAAGGGGCGCGGGGAGGAGGGCGGCATTGACT
TTGACCAGGTGTTCAGCGACGACGACGCGGAGCTGCAGGATGTGTTCAGC
GACGACGATGCGGAGCTGGAGGACGTGTACAATGCGGACGTGGGCCTGGA
CTCTAGCGAGGACGAAACGGAGGAGGTCAAGGAGGGGGAGGCCGCGGGGC
AGAAGCTGCTGGACAAGGCCCTAGAGGGGGGAGGGGAGGAGGGGGAGGAG
GCGGAGGAGGAGGAGGCAGAGGAGCTGGCTGGACAAGGCGCTGGAGGGGG
TGGCAAGGAGGGGGAGGAGGCGGAGGAGGAGGAGGCGGAAGAGGACGACT
ACACTGTCTCCGGCACATACAAAGCGCGCATGGCCGCGCGCGCCAGCCCC
GTGCCCTCCGAAACCGAATCCGCCGCGGGCGCCGCCGCCGCCGCCGCTGA
GCCCAGCGCCGCCGCCGCCGCCGGCGAGGCAGGGGGGCGCAAGCGCTCTG
CGGCGGAGGCAGCGGCGGGGGCAGGGGAGGCGAAGCGGCCGCGGCCGGCG
GCGGCGGCGCAGGGCGCGCTGGCGCTTACGCAGGAGAATATGATACTGGT
GCTGAGGCGTGCGGGGGGGAAGATGACGAGCAAGAAGCTGCTGAGCGCGT
TCCGCCACGAGCTGCAGCGCGACAAGGCGAACCGCGCGCTGTTCAAGCAG
CTGCTGCAGGCGCTCGTGACGGGCGTCGACGACGCGCTCGAGGGCAAGGT
CTACAAGCTCAAGGACATCTGGATGACGTAAATAGAGGGCTTGTGGATGA
CAGAAGAGTCAGGCGCGACGGAGCCTCAACTCGCACCCTAGCCTTAAGTG
CGCACGATATCAGGACGGCGTTGATACTTAGAGGGGATGTGAAGGGCGGA
GGAGTCAGGCGCAGCGGAGCCTCAACTTGAACCCTTACCGTGCGCATGAT
CAGGGGGCTGGGGTGCACAAGGGCGGTGATGTCAGGCACCCCCATTGGAC
TTGCATGCTCAGGTGCGGCCGTAGCGGCGCGCGCTTGCGCAAGCCGCACG
AGCAAGGTCATCTGGACTGCGTACAGGTGGCGGCGCCATGCGTAGGTCGT
GCGCCAGCCCTGCGGCGTCTTCTTGGTGGCTCCCCATGCAGAGCGACACA
GACGTGGTGCTCGCAGTGGCGCGGTGCACAGTCTTTGGCATTTGGGGGAA
GCAGCAATTCCTGTTGCTAGGACGGCAGGCTGAGCACTGTTGCAACACTG
TCGAGCTGCCAGATTTGCAGCACGCATGGAGCATATCGCAACAGAGCAGC
AGTGCGCCGCTAATGGGCCATTAGTAATGGCGCAGCTGACCTATCACAGG
TGCCGAGATGACAGCGCATGTTCAGATACAGTAGCACTGCAACTGCTTCC
GTCTGTGCAGCGCCGCCGACAGAGCACAGCAAAACCCATGTGTCGGATGG
CCCTGTGCGGCAGTTGCTGTCCGTCACAGACACCATAATGAACTGACTCT
CAACCAATGCTGCACTTGAGGCACTGATCTTTGATCGAAGGCGTTTAAGG
CAAAGTGCTTGGCGA

protein sequence of jgi.p|Trimin1|353939

>Trimin1|353939|estExt_Genemark1.C_Ctg_1980006 ID=Trimin1|353939|estExt_Genemark1.C_Ctg_1980006|Name=jgi.p|Trimin1|353939|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=577bp
MAEEPEAVWKLQMGSKTGGHNIGIFEPGYVTRAGGQKEAPAAMTPLFHDT
DYCEKPVYMWKEREPETWSDDEDEEKKEKEKLGAFDRPKPKGARSKTRQD
DAGYHAKSCSTAEVMMPLFPSLEDQWRRVQWHMEDARPPPHNMHFVGDRK
EQASKYVLFEVQDNEEEAVIKVIPVDEWWRFTKAAREVKMTVKEAMEKMK
KQQRGYISGNRALEAVLTATEDARTGEGDDSALTLDSDAKASRKKAAAPK
VAARAYAPKDEASDPEDRASEAEESGPEGGEPNEAEPGGDAARKPAKKRG
EEGGIDFDQPNAGAGGDAARKPVKGRGEEGGIDFDQVFSDDDAELQDVFS
DDDAELEDVYNADVGLDSSEDETEEVKEGEAAGQKLLDKALEGGGEEGEE
AEEEEAEELAGQGAGGGGKEGEEAEEEEAEEDDYTVSGTYKARMAARASP
VPSETESAAGAAAAAAEPSAAAAAGEAGGRKRSAAEAAAGAGEAKRPRPA
AAAQGALALTQENMILVLRRAGGKMTSKKLLSAFRHELQRDKANRALFKQ
LLQALVTGVDDALEGKVYKLKDIWMT*

mRNA from alignment at Contig_198:54056..63197-

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_16021 ID=mRNA_16021|Name=jgi.p|Trimin1|353939|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=9142bp|location=Sequence derived from alignment at Contig_198:54056..63197- (Tribonema minus UTEX_B_3156 )
ATGGCGGAGGAGCCGGAAGCCGTCTGGAAGCTGCAAATGGGCAGCAAGAC
GGGAGGGCACAACATAGGCATTTTTGAACCGGGCTATGTTACCCGTGCTG
GCGGGCAGAAGGAGGCCCCGGCAGCCATGACTCCCCTGTTCCATGACACG
GACTACTGCGAGAAGCCTGTGTACATGTGGAAGGAGCGGGAGCCGGAGAC
ATGGAGTGACGATGAGGATGAGGAGAAGAAGGAGAAGGAGAAGCTGGGGG
CATTTGACAGGCCAAAGCCGAAGGGAGCACGCAGCAAAACAAGGCAAGAT
GATGCTGGATACCATGGTCAATTACTAACTGAAATGATAAGCTGCTTGGC
AGAAACTGCACGCAGAATCGTTGTTGCAGCAGCGATAGTATACCTGCATG
TGACTATTCAGGCGAACATGCACTGAATTCGCGATTGTCGCCTATCTCGC
AGTCTGTACCAGAGTTCTGATGAGGCGAGACTACCTGATGCTACTGGTCT
CTGTGGTGCTTGTTCCCCTTATTGTCTTGGTGGGCACAGCCGCATGCCTC
CCATGATTCGCCACTTCGGTTGCCATGCTCAGCAGCGGCAGTGTACTGCA
CCTTTGAAGATTCACAGAGTCATGCCGGGGCACGTTCAGCGTTCAGCACA
GACAGTCAATCATGCCTGCTTGCAATTGCCACAAGCGACTCAGCAGATCG
GTTTCAGGGTCTCTGAGCTGAACACTGATCTTAGAGGCGAGTCAGTGACG
CAGACGCTGTTGAACCGTGCTGGCAGCAAAGAGCTGCAGCACAGCAGAGG
TCATGATGCCGCTGTTCCCTTCGTTGGAGGACCAATGGAGGTGCTTGCGG
AGCCTACATTTCTTATTGACCTCACGGCGCATGCAAAGATGGCGCCGTTG
CTCTGGTGCTTCAAATGTAGCATTGCGGCTCTGCCGTTGCACTCCAGTGC
TTTGATGTCCCGCTGCCTGCCAGCCATTTGGCAGAGGGCGTGCCTTCCCT
GCAACCTGCAGCATCAGTGAACTGCAATGCAGCAACACTTGAATGCGGAA
TATTTGGAAGCAGCCACAGGGGCTGCTTGGATTGTGCTGCTGCAGTGTCA
GCAGACACAAGACACACCCAATAAACGCTTGACGTGCATAAGTTGCCCAT
GCTTACGAGGAAGGCAACCGCATATGGCCCCCCACCCCCACCCCCCCACC
CCCTCCCCCCTCACCCCCCCCCGCCAGCCCCCGTCCCTGCCCATCCCCCC
CTGGATCCCGGCACTGGCACATGATCTCAGCATGAAGGACCCCCCCCACT
TCCCCTTCTGTGCAAAATAGTCATTTGCCAGCCCCGCTTTGCTGCGTATT
TGTAGCGCTACATACCTACGGTAGGCAGCATGCCCCCCCCCCCCCCCTCG
TGTGAGCACTGGGACCCCCCTCCCACTGCAGGTGTGTGCAGTGGCACACG
GAGGACGCACGGCCGCCGCCCCTGCTACATACCCACGGTAGTGCAACATA
CCCCTCCCCCTAAACCTAAGCACTGCGATCCCCCCTCCCCCTGCATGCGC
GTGCAGTGGCACATGGAGAATGCGCGGCCGCCGCCCCTGCTTCATACCCA
CAGTAGTGCATACCCTCTGTAGTGCAACATACCCCCCCCTCCTTTCACTG
AGCACTGCGATTCCCCTACCCCCTGCAGGCGCGTGCAGTGGCACATGGAG
GATGCGCGGCCGCCGCCGCACAACATGCACTTTGTGGGGGACAGGAAGGA
GCAGGCGTCTAAGTACGTGCTGTTTGAGGTGCAAGACAATGAGGAGGAAG
CGGTCATCAAGGTACGTTGGTATTATTACTATTCATACTTGAAGTAAATG
GTTATTATTGTGGATGACAACGCGTTGCATCAGCGAAGTGAGCCGCGAGG
GACGTTGATTGGAGGAATTGTGCTAGAAGTATATACGTTGTGACTGAAGA
GGGCGTCTGAATATAATGTGATGAGCATTACTCAAATGCATGCAGGTGTC
CTGTGCGTGGACTGCCATCATCACAATACTCATGAAGACCGTCCTTGCTG
TACATACATACGTCTCATCATCCTCATTACGACATCATGAGGTTTTGCTA
CTTGCACTTCTCAATCAGAAGAGTTGGTGCGCAGTGCATGCCGTTTTTAC
AGTAGTTGCAGATGTATGCCTCTGTTGCATTCGCCAGTGGTGGTGGCACT
GAATTGCACACTTCTGACACTTGGCACGTAGTTTCGTCAGTATTGGTAGC
ACTGAAATGCGCACTTTTGGCAGGTGCTGCCAGGACGTGCAAACAGCAGC
GCTCAGCGCACCAGCAGGACCACGACTCAAAGGCTCTGCAAACATCTGTT
GCTGTGGCGCTTGGGGCACGCCAATCCATGAACGAACCATCATTCATCTA
CTGTGGTTATGGTGGCACTGTTTGACTCGTGGCCACTGACTGCAGCAGCG
GCGACCACGGTTATTGGCGGAAGGCACTTGCGGCTAACCATCCCTTGTCA
CCTGGAGCTCAACGATCTGATTCGGTTTTTATTCCATGAATGAGTCATCA
TTCATGACACATTGTCAATGCGGATACCTCATCGACTTGCCGATAGACAA
GTGATCATCATTTCCTGAACCGCCCATGACCGTTGAGTCGGTAATCCGCT
CATGAACATGAATGATGAATATGCAGGTGATTCCCGTAGATGAATGGTGG
CGCTTCACCAAGGCAGCTCGCGAGGTCAAGATGACCGTCAAGGAGGCCAT
GGAGAAGATGAAGAAGCAGCAGCGGGGGTACATTTCTGGGAACAGGGCGC
TGGAAGCAGTGCTCACAGCCACAGGTGAGTGACTATGTCTTGTTTCAGAT
CTATAGATGTCAGCTTGCACAGCGGACATTCATACGTGCAGGTATCGTGC
AGGTAACGTTTAGGTGTATAGGTATCAGTGGCTTGTATCACTCAAGACCT
TTTCTTGAAAGAGTCATGGAGAACGATGCCGCAAGTGGGGGTAGGCATGT
ATCTGGGAACAGGGGCACCTTTGAGGCAGTGCTCACAGCCACAGGTGAGT
GGCCATATATGCCTAGTGGGGAACCCTGGATGTCAGCTCGCACAGCGGCA
TGTGCAGGCATCGTATAGGTATCAGTGGCATGTATCAGTAAATATTACTT
CTTGAAGGATGTCATGGAGAACATGCCGCAGTGGGGGTATGTATATGGGA
ACAGAGTACTTGGAGGCAGCGCTCACATCCAGAGGTAAGTGGGCATGTCT
CGTGGCATCCGTAGGTGAAGTAGTGGGGGCATGTTCATAGGTACCAGGTG
ACTGGCCGTGTCTTGTGGAGGCTGTGTGAGTATCATGTGCCTATTAAGGC
CGACCGGGCCAACAATTGGCGTGTACCGGGCGCCAATCCTAATTATGCCC
AGGTGTTTTTTCTGGCAGTCTCAATTAGGCCTGGTGGCACATCCGCCATG
TTGACCTCATGGTTGCATGGCCCTATTGTGTGCTCGCACGGTCAAGTAAA
TGAACCCGAACGCCATAGCAAGCAAGCAGATGGCGAGTTCCATGCTCACA
AGTGTCGTGATATTGATGTGCAGTCTGTTTGCAGCCGCACAATGATGGCC
TTCCCCCCGTTCACTACCGTTTCTCGAGATCGCCAAAACAACTTCACCTG
TAAGTTGAATTTCTTACCGAAACTGGTACAGAAAGGCGCTCATGGATGTC
ATTGTGTGCTCATTTGGGGTGTTCCTGATGCTCTGTCCTAATTAGGCCTG
GTGCTTTTTTTGCGTGAACCCAATTCAGTGTTCGAGTGCTTCATTTCACG
ATGCCTAATGTTGGCCTGGTCGGCCTAAATAGGCACATGACGGTATATCT
GTTGGCGTGCACACGACGTACCAGTGGTATGCATGTATTGGTGTCAATGG
TGTATACCTGGTCAAGGCGGAGACCATCTCAGAGGCCATGGAGAAGATGC
CGAAGTACATTCCACAATTCCCCCACATCAACCCCCACCCCATGCACACA
TGCTGCATGGTGCCTTCTGCTTTGGCGCACTACCACTGTTGAGCACTGAT
GCCTGACCAGCGCACGCAACCGCGACACCTCGCCACTGCGCAGAGGATGC
GCGCACCGGCAACGGCGATTACAGCTCGCTACATCGAAGTTACACGTCAT
ACCATCGTCCCCCCCGCATCTCCCTGCGCACATGTGCCACAGTACGCCTA
GTCGCTCTGAAACACCGCCGCGCACGAGCACTGATGTCTGACACTGCGTG
CGCGCGCGCCGCCGTGACACTACGCGCCATTGTGTGCAGAGGACGCGCGC
ACCGGCGAAGGCGACGATAGCGCCCTACATCATAGTTAGTCTTCATATCA
TCGTACCCCCCGCATCAACCCCCCACCCCATGCACGCTTGACGCCTACTT
GCTTTGGCACGTCACCACGGTCGAGCAAAACATCTCAACGCTCCACGCTG
CGCGACACTGCGCGCAGAGGACGCGCGCACCGGCGAAGGCGACGACAGCG
CGCTCACCCTCGACACAGCCAAAATCACACTCCATACCTTGGTGCATACT
GTAGTCCCCACTACCCCATGCACAAATAGCGCCTACTTGCTTTGGCCCAC
CGCCGTTGTTGAGCACCGATGCCTGCCACTTGCGCCATTGTGCAGAGGAC
GCGCGCACTGGCGAAGGCGACGACAGCGCGCTCACCCTCGACAGCGACGC
CAAGGCCTCCAGGAAAAAGGCGGCGGCGCCCAAGGTTGCGGCGCGCGCTT
ATGCCCCTAAGGACGAGGCCTCCGATCCCGAAGACCGCGCCAGCGAGGCC
GAGGAGAGTGGGCCGGAGGGGGGGGAGCCGAATGAGGCGGAGCCGGGGGG
GGATGCGGCCAGGAAGCCGGCGAAGAAGCGGGGGGAGGAGGGCGGCATCG
ACTTTGACCAGGTCAGCGCTCAGCAAGTTATAGGAAAAACTACTCCAAAA
ATACAACAATATTTCAAACTGAAAATTGTACTTTAAAGTACGTTTCCATA
CCGTTCAGAGTCAAGCAAAAAAGGGTAACGGTAGTTCCACCGCACACTTT
GCGTTTTTTAGAAGTACTTGGGAGTAGTAGTATACGCTGCCCCTGTCCGA
GCCGCATCGAGCGCTGCTGCAGTACAAGCTGAGCATCGCCTCCGCTCAAA
GCCCAATGCCGGGGCGGGGGGCGACGCGGCCAGGAAGCCAGTCAAGGGGC
GCGGGGAGGAGGGCGGCATTGACTTTGACCAGGTCAGCGCTCAACAAGGG
GAAAGAGAGGAATGGTAAAACCACGTTTCCGTCTATTGTTGGCGTCATGG
GTTCTTTGGAGGCACTGCGGTAGCCACCAGGACGCCGGCGAAGAAGTGCA
GCGAGGACGGCGGCAGTTAACTTTGAACTGCCAGGTGAGCGCTCAACAGG
TACTTCAAAGTTGAATAATGTTGTTGAAGAAGACAGTTGAAGTAATGACA
CACACACACACAGCGTCATGTCTTGAAGTTAACTCTGAACTGCCAGGTCA
GCGCTCAACAGGTACTTCAATGTTGAAGAAGGTTCTTGAAGAAGGCAGTT
GAAGTAATGACACACACACACTGCGTCATGTCTTGAAGTGGCATTGAGCA
AGAGGAAGGGGGCATCGACTTGATCAGATCAGCGCACAACAACATATTGA
TCTGATGCGAATGTTGTAGAAGAAGGCAAATCCGCGCCTGAAGTTGAAGT
TGACTGCTGTGTGGCCACGCCTGCCAACACCAGCAATTTTGACACTTATT
ACCGCGGCAGAACTCTCTTGAAGTGCTGCTACCACCGTGCGCACTTCTCG
CGGTGTTCGGTGACGATGACCAGAGCGTGTACACAATATTGAAGTTGATG
TTTACAGTTTTTGCGCTCTTATCGCCTACGCCAGCCATGTGACGCTGACC
CCTCTATCGCCAGTACCAGCTATTGCCGCGTGTGCTTCTTGCCCAGGAGT
TCGGCGACAGCAGAACTCTCACGAGATGCTGCAACTGTTGTGGTGCATTT
CTCGCACAGTTGTTCAGCGACGACGACGTAGAGCTGGAGGACGTGTACAT
GCTGTTGAAGTTGAAGTTTGTTGATTTGTTCTCTATGGCCAATACAGTAC
CAGCAATTTGATGCTCACCTCCGCGGCAGAACTCTCACGACATGCTGCTA
CCGCCATGCGCAGGTCTTCAGTGACGACGACGCGGAGCTGGAACTTGGTA
TTCAAGTTGAAGTTGGCTTTTTCGGCGCTCTGCATCGCCAGTACCAGCAC
TTCACCACCGCAGAACTCTCAGGAAATGCTGCTATTGACATGCGCGCTTT
TGGCCCAGGTGTTCAGCGACGACGACGCGGAGCTGCAGGATGTGACGCCG
AAGTTGAAATTTGAAGTTGCCTTGTTTTGGCGCTCACATCAATAATCATC
AATACCATCAATTTGACGCTGACCACCACAGCAAAACCCTCACAAAATGT
GCTCTCGTCGCGCGCACTTCTTGCAGGTGTTCAGCGACGACGATGCGGAG
CTGGAGGACGTGTACAATGCGGACGTGGGCCTGGACTCTAGCGAGGACGA
AACGGAGGAGGTCAAGGAGGGGGAGGCCGCGGGGCAGAAGCTGCTGGACA
AGGCCCTAGAGGGGGGAGGGGAGGAGGGGGAGGAGGCGGAGGAGGAGGAG
GCAGAGGAGGTCAGTGCTCATACGACGACTAGGGCCAGGGTTAGGGTTAG
GTTTAGGATGAAGGTTAGGGTTAGGGTTAGGGGTTCTAGGCATTGTAATT
GTAAGATAGCTGGCTGGACAAGGCGCTGGAGGGGGTGGCAAGGAGGGGGA
GGAGGCGGAGGAGGAGGAGGCGGAAGAGGTCAGTGCTCAGTGTGCTTTGA
GGCATGACGTGGGTTTGGATGGTAGGCAAGTACTGATAATTGGCCGGCGG
CGATAACCATCACTGATGGCGATCTGTGCAGGCAGCAGCTGCGCTGGGGC
GGAGGAGGTCAGTGCTCAGCGTGGAGAGGGTCTACTAGAGGCATGGCGCG
CTTGTGTTTTTTGGATGGCAGGAGCATACATTGAGGTCCTGTAGGGGGGG
GGCGAGGAAGGGGAGGAGCAGAGGAAGTCAGTGCTCAGTATGTCGACTAG
GGTTAGGGTCAGGGTTAAAGTTAGGATCAGGATTAGGGGGTGGGGTGCGC
AGCGGTGCATGCGAGGTCAATGTGCTGTTCAAATGGTACAAGAAGTACTG
CATTTTGATGTGTTGGAGGAGGCGGAGGAGGTTAGTGCTCAGTACAGTGA
GGCATGATGTGCTTTTCGGATGTACAGTGCGGCATGGCGTTCTTTTTGGA
TGGTCGGCACGTACTTCATTGTGGTGCACCGGCGTTAGGGGCAGGGGTTT
CAGTGGTTTTGACATAGCTGGGCGGCGGCGCTGCGGATGGCGCCCTGTTT
GGGCAGCGGCTCCAAAGGGCAGTGCTCAGCATGCAGTAGAGGCTCAGTGT
GCTGGAGGGTTGGCGCAATTGAGCGTTTCATTGGTATGCAGTGTCACCTC
CGTGTGTTGGAGCTCGGTAAGTTGAGGGGCAGAAGAGGGCAGTGCCCAGG
CTGCAGAGGCATGGCGCGTTATTTGGACGGTAGTAGATGAAAGTTTTTTT
TGGGCTCATGTAAATGTTCTAGTAGCAGCGCTGTCAGTCACAGACAGCAC
CCTGATCTGCATTGAGGCGGCCTCTGACATTGATCATTGCCTACCTCACG
CCACGCAGTCTTCGTGTCGCGCCAGCCCATTCATTGTCGTATGCTTGGAA
TAGGGCTAGGTTAAGGTTCAGCTTATGCCGGCGGCGCCGCTCCACGCCTT
GATGCCGATGGACTGCCATGCACTCTGCTACAAACACATGCATACATTGC
AGTAGAATACGTACACGTACCTGCACACTAACCCCCCCCCCCCCTGCCCC
CCCCCCTGCCTCACCCCCAGGACGACTACACTGTCTCCGGCACATACAAA
GCGCGCATGGCCGCGCGCGCCAGCCCCGTGCCCTCCGAAACCGAATCCGC
CGCGGGCGCCGCCGCCGCCGCCGCTGAGCCCAGCGCCGCCGCCGCCGCCG
GCGAGGCAGGGGGGCGCAAGCGCTCTGCGGCGGAGGCAGCGGCGGGGGCA
GGGGAGGCGAAGCGGCCGCGGCCGGCGGCGGCGGCGCAGGGCGCGCTGGC
GCTTACGCAGGAGAATATGATACTGGTGCTGAGGCGTGCGGGGGGGAAGA
TGACGAGCAAGAAGCTGCTGAGCGCGTTCCGCCACGAGCTGCAGCGCGAC
AAGGCGAACCGCGCGCTGTTCAAGCAGCTGCTGCAGGCGCTCGTGACGGG
CGTCGACGACGCGCTCGAGGGCAAGGTCTACAAGCTCAAGGACATCTGGA
TGACGTAAATAGAGGGCTTGTGGATGACAGAAGAGTCAGGCGCGACGGAG
CCTCAACTCGCACCCTAGCCTTAAGTGCGCACGATATCAGGACGGCGTTG
ATACTTAGAGGGGATGTGAAGGGCGGAGGAGTCAGGCGCAGCGGAGCCTC
AACTTGAACCCTTACCGTGCGCATGATCAGGGGGCTGGGGTGCACAAGGG
CGGTGATGTCAGGCACCCCCATTGGACTTGCATGCTCAGGTGCGGCCGTA
GCGGCGCGCGCTTGCGCAAGCCGCACGAGCAAGGTCATCTGGACTGCGTA
CAGGTGGCGGCGCCATGCGTAGGTCGTGCGCCAGCCCTGCGGCGTCTTCT
TGGTGGCTCCCCATGCAGAGCGACACAGACGTGGTGCTCGCAGTGGCGCG
GTGCACAGTCTTTGGCATTTGGGGGAAGCAGCAATTCCTGTTGCTAGGAC
GGCAGGCTGAGCACTGTTGCAACACTGTCGAGCTGCCAGATTTGCAGCAC
GCATGGAGCATATCGCAACAGAGCAGCAGTGCGCCGCTAATGGGCCATTA
GTAATGGCGCAGCTGACCTATCACAGGTGCCGAGATGACAGCGCATGTTC
AGATACAGTAGCACTGCAACTGCTTCCGTCTGTGCAGCGCCGCCGACAGA
GCACAGCAAAACCCATGTGTCGGATGGCCCTGTGCGGCAGTTGCTGTCCG
TCACAGACACCATAATGAACTGACTCTCAACCAATGCTGCACTTGAGGCA
CTGATCTTTGATCGAAGGCGTTTAAGGCAAAGTGCTTGGCGA

Coding sequence (CDS) from alignment at Contig_198:54056..63197-

>mRNA_16021 ID=mRNA_16021|Name=jgi.p|Trimin1|353939|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1731bp|location=Sequence derived from alignment at Contig_198:54056..63197- (Tribonema minus UTEX_B_3156 )
ATGGCGGAGGAGCCGGAAGCCGTCTGGAAGCTGCAAATGGGCAGCAAGAC
GGGAGGGCACAACATAGGCATTTTTGAACCGGGCTATGTTACCCGTGCTG
GCGGGCAGAAGGAGGCCCCGGCAGCCATGACTCCCCTGTTCCATGACACG
GACTACTGCGAGAAGCCTGTGTACATGTGGAAGGAGCGGGAGCCGGAGAC
ATGGAGTGACGATGAGGATGAGGAGAAGAAGGAGAAGGAGAAGCTGGGGG
CATTTGACAGGCCAAAGCCGAAGGGAGCACGCAGCAAAACAAGGCAAGAT
GATGCTGGATACCATGCAAAGAGCTGCAGCACAGCAGAGGTCATGATGCC
GCTGTTCCCTTCGTTGGAGGACCAATGGAGGCGCGTGCAGTGGCACATGG
AGGATGCGCGGCCGCCGCCGCACAACATGCACTTTGTGGGGGACAGGAAG
GAGCAGGCGTCTAAGTACGTGCTGTTTGAGGTGCAAGACAATGAGGAGGA
AGCGGTCATCAAGGTGATTCCCGTAGATGAATGGTGGCGCTTCACCAAGG
CAGCTCGCGAGGTCAAGATGACCGTCAAGGAGGCCATGGAGAAGATGAAG
AAGCAGCAGCGGGGGTACATTTCTGGGAACAGGGCGCTGGAAGCAGTGCT
CACAGCCACAGAGGACGCGCGCACTGGCGAAGGCGACGACAGCGCGCTCA
CCCTCGACAGCGACGCCAAGGCCTCCAGGAAAAAGGCGGCGGCGCCCAAG
GTTGCGGCGCGCGCTTATGCCCCTAAGGACGAGGCCTCCGATCCCGAAGA
CCGCGCCAGCGAGGCCGAGGAGAGTGGGCCGGAGGGGGGGGAGCCGAATG
AGGCGGAGCCGGGGGGGGATGCGGCCAGGAAGCCGGCGAAGAAGCGGGGG
GAGGAGGGCGGCATCGACTTTGACCAGCCCAATGCCGGGGCGGGGGGCGA
CGCGGCCAGGAAGCCAGTCAAGGGGCGCGGGGAGGAGGGCGGCATTGACT
TTGACCAGGTGTTCAGCGACGACGACGCGGAGCTGCAGGATGTGTTCAGC
GACGACGATGCGGAGCTGGAGGACGTGTACAATGCGGACGTGGGCCTGGA
CTCTAGCGAGGACGAAACGGAGGAGGTCAAGGAGGGGGAGGCCGCGGGGC
AGAAGCTGCTGGACAAGGCCCTAGAGGGGGGAGGGGAGGAGGGGGAGGAG
GCGGAGGAGGAGGAGGCAGAGGAGCTGGCTGGACAAGGCGCTGGAGGGGG
TGGCAAGGAGGGGGAGGAGGCGGAGGAGGAGGAGGCGGAAGAGGACGACT
ACACTGTCTCCGGCACATACAAAGCGCGCATGGCCGCGCGCGCCAGCCCC
GTGCCCTCCGAAACCGAATCCGCCGCGGGCGCCGCCGCCGCCGCCGCTGA
GCCCAGCGCCGCCGCCGCCGCCGGCGAGGCAGGGGGGCGCAAGCGCTCTG
CGGCGGAGGCAGCGGCGGGGGCAGGGGAGGCGAAGCGGCCGCGGCCGGCG
GCGGCGGCGCAGGGCGCGCTGGCGCTTACGCAGGAGAATATGATACTGGT
GCTGAGGCGTGCGGGGGGGAAGATGACGAGCAAGAAGCTGCTGAGCGCGT
TCCGCCACGAGCTGCAGCGCGACAAGGCGAACCGCGCGCTGTTCAAGCAG
CTGCTGCAGGCGCTCGTGACGGGCGTCGACGACGCGCTCGAGGGCAAGGT
CTACAAGCTCAAGGACATCTGGATGACGTAA