mRNA_15963 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|352581
Unique NamemRNA_15963
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|352581 vs. uniprot
Match: A0A836CPC9_9STRA (BZIP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPC9_9STRA)

HSP 1 Score: 1144 bits (2959), Expect = 0.000e+0
Identity = 717/719 (99.72%), Postives = 717/719 (99.72%), Query Frame = 3 
Query:   27 MARLSTEKYSHWELSGQRMTSAIASEYHCSDFNWEDLRERVQALVEAKPVLTKAQAERVLRGRRRKGSDGCDCNWEAFYRMHDNANVYKPRRYVAKVWPQLVDPRAGIARILELGCGYGSTLLPLLQLAPHLSAVGSDVSPLVVERLRRHPLFDAERCHAVVHDAAAAPIDAAVQPGTMDAVLLVFAVSAMPPARHAWVLQQAAAALRGGGCILLRDIIMLNXXXXXXXXXXXXXXXYGLYDLSQLRSANRIEGNLYAREDGTLTYFFSVEGVATLAAQAGVEVEACAYHTVANVNRKHQLKLERAMGCKKRRRAKDQDTLQRARERNKLHARXXXXXKKEFMSSLQQRLTEVRDELQRLREGLGAPSKATALEVLDAAGIRRTICLDAILRQFDASPGGGVYHFDEKLFGWMLPKAEQQHDPDKTGSVDGDLDHGDAMDDDAAADLAAADAGGDAXXXXXXXXXXXXXXXXXXXXXXXXPRGRRLQGLSAVEKQQERRARNRIHARRTRERKKQLLQASHHANTPLITQTALHLASAEIESLQRGGHSPPRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSSRHPRATKRIKLSPTKTVSXXXXXXXXXXXXXXRCGDDALSIAETALLLLRCGAVSSASWRADDGACVFGTRSAPTQTQWDWGDAVAFAGGRDGVLVLDGQGSGGSSGXXXXNGGKLMAG 2183
            MARLSTEKYSHWELSGQRMTSAIASEYHCSDFNWEDLRERVQALVEAKPVLTKAQAERVLRGRRRKGSDGCDCNWEAFYRMHDNANVYKPRRYVAKVWPQLVDPRAGIARILELGCGYGSTLLPLLQLAPHLSAVGSDVSPLVVERLRRHPLFDAERCHAVVHDAAAAPIDAAVQPGTMDAVLLVFAVSAMPPARHAWVLQQAAAALRGGGCILLRDIIMLNXXXXXXXXXXXXXXXYGLYDLSQLRSANRIEGNLYAREDGTLTYFFSVEGVATLAAQAGVEVEACAYHTVANVNRKHQLKLERAMGCKKRRRAKDQDTLQRARERNKLHARXXXXXKKEFMSSLQQRLTEVRDELQRLREGLGAPSKATALEVLDAAGIRRTICLDAILRQFDASPGGGVYHFDEKLFGWMLPKAEQQHDPDKTGSVDGDLDHGDAMDDDAAADLAAADAGGDAXXXXXXXXXXXXXXXXXXXXXXXXPRGRRLQGLSAVEKQQERRARNRIHARRTRERKKQLLQASHHANTPLITQTALHLASAEIESLQRGGHSPPRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSSRHPRATKRIKLSPTKTVSXXXXXXXXXXXXXXRCGDDALSIAETALLLLRCGAVSSASWRADDGACVFGTRSAPTQTQWDWGDAVAFAGGRDGVLVLDGQGSGGSSGXX  NGGKLMAG
Sbjct:    1 MARLSTEKYSHWELSGQRMTSAIASEYHCSDFNWEDLRERVQALVEAKPVLTKAQAERVLRGRRRKGSDGCDCNWEAFYRMHDNANVYKPRRYVAKVWPQLVDPRAGIARILELGCGYGSTLLPLLQLAPHLSAVGSDVSPLVVERLRRHPLFDAERCHAVVHDAAAAPIDAAVQPGTMDAVLLVFAVSAMPPARHAWVLQQAAAALRGGGCILLRDIIMLNXXXXXXXXXXXXXXXYGLYDLSQLRSANRIEGNLYAREDGTLTYFFSVEGVATLAAQAGVEVEACAYHTVANVNRKHQLKLERAMGCKKRRRAKDQDTLQRARERNKLHARXXXXXKKEFMSSLQQRLTEVRDELQRLREGLGAPSKATALEVLDAAGIRRTICLDAILRQFDASPGGGVYHFDEKLFGWMLPKAEQQHDPDKTGSVDGDLDHGDAMDDDAAADLAAADAGGDAXXXXXXXXXXXXXXXXXXXXXXXXPRGRRLQGLSAVEKQQERRARNRIHARRTRERKKQLLQASHHANTPLITQTALHLASAEIESLQRGGHSPPRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSSRHPRATKRIKLSPTKTVSXXXXXXXXXXXXXXRCGDDALSIAETALLLLRCGAVSSASWRADDGACVFGTRSAPTQTQWDWGDAVAFAGGRDGVLVLDGQGSGGSSGXXDGNGGKLMAG 719
[Close]
BLAST of jgi.p|Trimin1|352581 vs. uniprot
Match: W2PX80_PHYPN (tRNA N(3)-methylcytidine methyltransferase n=8 Tax=Phytophthora TaxID=4783 RepID=W2PX80_PHYPN)

HSP 1 Score: 160 bits (404), Expect = 3.110e-40
Identity = 99/278 (35.61%), Postives = 146/278 (52.52%), Query Frame = 3 
Query:  108 HCSDFNWEDLRERVQALVEAKPVLTKAQAERVLRGRRRKGSDGCDCNWEAFYRMHDNANVYKPRRYVAKVWPQLVDPRAGIARILELGCGYGSTLLPLLQLAPHLSAVGSDVSPLVVERLRRHPLFDAERCHAVVHDAAAAPIDAAVQPGTMDAVLLVFAVSAMPPARHAWVLQQAAAALRGGGCILLRDIIMLNXXXXXXXXXXXXXXXYGLYDLSQLRSANRIEGNLYAREDGTLTYFFSVEGVATLAAQAGVEVEACAYHTVANVNRKHQLKLER 941
            H  DF WEDL    +   + +  + + + +      ++   +  D  W+ F+   +N  VYKPR Y+ K +P+L  P   +  +LELGCGYGS + P+L   P++ A   D S   ++ L+ +P +D +RC A V D A   +   V P ++D VL+VF +SA+PP   A  LQ+  AALR GG +  RD                    YGLYDL+  R+A ++  +LY R DGTL YFFS E +A L  +AG +V    Y TV   NRK  + ++R
Sbjct:   30 HSRDFEWEDLARECEMHAKERDEVVEGEVKEGPLETQQLAKEAKD-KWDVFH-QRNNGKVYKPRNYLVKEFPELYAPEREVVEVLELGCGYGSAIFPILAECPNIHAQVCDFSAHAIDILQHNPEYDPKRCRAFVCDIAQEELTR-VAPESIDIVLMVFVLSALPPESFAQTLQKIFAALRPGGIVCFRD--------------------YGLYDLAMRRNAKKLGPSLYYRSDGTLAYFFSREVLAELFEKAGFQVLENEYCTVRLRNRKKGVTMDR 284
[Close]
BLAST of jgi.p|Trimin1|352581 vs. uniprot
Match: A0A329SNH8_9STRA (tRNA N(3)-methylcytidine methyltransferase n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SNH8_9STRA)

HSP 1 Score: 159 bits (401), Expect = 5.280e-40
Identity = 102/292 (34.93%), Postives = 148/292 (50.68%), Query Frame = 3 
Query:   66 LSGQRMTSAIASEYHCSDFNWEDLRERVQALVEAKPVLTKAQAERVLRGRRRKGSDGCDCNWEAFYRMHDNANVYKPRRYVAKVWPQLVDPRAGIARILELGCGYGSTLLPLLQLAPHLSAVGSDVSPLVVERLRRHPLFDAERCHAVVHDAAAAPIDAAVQPGTMDAVLLVFAVSAMPPARHAWVLQQAAAALRGGGCILLRDIIMLNXXXXXXXXXXXXXXXYGLYDLSQLRSANRIEGNLYAREDGTLTYFFSVEGVATLAAQAGVEVEACAYHTVANVNRKHQLKLER 941
            ++ Q++      + H  DF WEDL    Q   E    + + + +  L   ++   +  D  W+ F+   +N  VYKPR Y+ K +P+L      +  +LELGCGYGS + P+L   P++ A   D S   ++ L+ +P +D  RC A V D A   +   V P ++D VL+VF +SA+PP   A  LQ+  AALR GG +  RD                    YGLYDL+  R+A ++  NLY R DGTL YFFS E +A L  +AG       Y TV   NRK  + ++R
Sbjct:    2 MADQKLKPKREVQLHSRDFEWEDLARECQLHAEGGDEVIEDEGKAGLLETQQLAKEAKD-KWDDFH-QRNNGKVYKPRNYLVKEFPELYSLEREVVEVLELGCGYGSAIFPILAECPNIHAQVCDFSAHAIDILQHNPEYDPARCRAFVCDIAQEELKD-VAPESVDIVLMVFVLSALPPESFAQALQKIFAALRPGGIVCFRD--------------------YGLYDLAMRRNAKKLGPNLYYRSDGTLAYFFSCEVLADLFDRAGFHTLENEYCTVRLRNRKKGVTMDR 270
[Close]
BLAST of jgi.p|Trimin1|352581 vs. uniprot
Match: M4C1J2_HYAAE (tRNA N(3)-methylcytidine methyltransferase n=2 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C1J2_HYAAE)

HSP 1 Score: 157 bits (398), Expect = 1.400e-39
Identity = 103/283 (36.40%), Postives = 144/283 (50.88%), Query Frame = 3 
Query:   96 ASEYHCSDFNWEDLRERVQAL-VEAKPVLTKAQAERVLRGRRRKGSDGCDCNWEAFYRMHDNANVYKPRRYVAKVWPQLVDPRAGIARILELGCGYGSTLLPLLQLAPHLSAVGSDVSPLVVERLRRHPLFDAERCHAVVHDAAAAPIDAAVQPGTMDAVLLVFAVSAMPPARHAWVLQQAAAALRGGGCILLRDIIMLNXXXXXXXXXXXXXXXYGLYDLSQLRSANRIEGNLYAREDGTLTYFFSVEGVATLAAQAGVEVEACAYHTVANVNRKHQLKLER 941
            A + H  DF W +L +R Q    E++  + K   E+ L   ++   +  D  WE F++ H N  VYKPR Y+ + +P+L  P   +  +LELGCGYGS + P+L   P++ A   D S   +  L  HP +DA RC A V D A   +   V   ++D  L+VF +SA+PP   A  LQ+  A LR GG +  RD                    YGLYDL+  R+A ++  NLY R DGTL +FFS E +  L  QAG       Y TV   NRK  + ++R
Sbjct:    8 AVQLHSHDFEWNNLAKRCQMQNEESEDNVMKIDEEQELVDTQQLAKEARD-KWETFHQRH-NGKVYKPRNYLVREFPELCVPEREVVEVLELGCGYGSAIFPILAECPNVRAQVCDFSSHAINMLEHHPEYDATRCRAFVCDIAQEEL-VDVAHTSIDIELMVFVLSALPPESFARTLQKVYAVLRLGGIVCFRD--------------------YGLYDLAMRRNAKKLGPNLYYRSDGTLAFFFSREMLVQLFEQAGFHTLEATYCTVRLRNRKKGVTMDR 267
[Close]
BLAST of jgi.p|Trimin1|352581 vs. uniprot
Match: D0MVG2_PHYIT (tRNA N(3)-methylcytidine methyltransferase n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MVG2_PHYIT)

HSP 1 Score: 153 bits (386), Expect = 5.230e-38
Identity = 101/278 (36.33%), Postives = 137/278 (49.28%), Query Frame = 3 
Query:  108 HCSDFNWEDLRERVQALVEAKPVLTKAQAERVLRGRRRKGSDGCDCNWEAFYRMHDNANVYKPRRYVAKVWPQLVDPRAGIARILELGCGYGSTLLPLLQLAPHLSAVGSDVSPLVVERLRRHPLFDAERCHAVVHDAAAAPIDAAVQPGTMDAVLLVFAVSAMPPARHAWVLQQAAAALRGGGCILLRDIIMLNXXXXXXXXXXXXXXXYGLYDLSQLRSANRIEGNLYAREDGTLTYFFSVEGVATLAAQAGVEVEACAYHTVANVNRKHQLKLER 941
            H  DF WEDL    Q L  AK    K                     W+ F+   +N  VYKPR Y+ K +P+L  P      +LELGCGYGS + P+L   P++ A   D S   ++ L+ +P +DA RC A V D A   +   V P ++D VL+VF +SA+PP   A  +Q+    LR GG +  RD                    YGLYDL+ LR+A ++  +LY R DGTL YFFS E +A L  QA  ++    Y TV   NRK  + ++R
Sbjct:   15 HSCDFEWEDLARECQQL--AKEAKYK---------------------WDVFH-QRNNGKVYKPRNYLVKEFPELYSPERAELEVLELGCGYGSAIFPILAECPNIHAQVCDFSAHAIDILQHNPEYDATRCRAFVCDIAQEELTG-VAPESIDIVLMVFVLSALPPKSFARAVQKIFTVLRPGGIVCFRD--------------------YGLYDLAMLRNAKKLGPSLYYRSDGTLAYFFSREVLAELFEQARFQILENDYCTVRLRNRKKGVTMDR 247
[Close]
BLAST of jgi.p|Trimin1|352581 vs. uniprot
Match: A0A8K1CAM5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CAM5_PYTOL)

HSP 1 Score: 152 bits (383), Expect = 1.000e-37
Identity = 99/288 (34.38%), Postives = 147/288 (51.04%), Query Frame = 3 
Query:   81 MTSAIASEYHCSDFNWEDLRERVQALVEAKPVLTKAQAERVLRGRRRKGSDGCDCNWEAFYRMHDNANVYKPRRYVAKVWPQLVDPRAGIARILELGCGYGSTLLPLLQLAPHLSAVGSDVSPLVVERLRRHPLFDAERCHAVVHDAAAAPIDAAVQPGTMDAVLLVFAVSAMPPARHAWVLQQAAAALRGGGCILLRDIIMLNXXXXXXXXXXXXXXXYGLYDLSQLRSANRIEGNLYAREDGTLTYFFSVEGVATLAAQA-GVEVEACAYHTVANVNRKHQLKLER 941
            MT+  + E H  DF WE+L    Q   E        + E +      + S      WE F+   ++   YKPR Y+ K +P+L DP     R+LE+GCGYGS + P+L   P++ A   D S   ++ L ++P ++ +RCHA V D      D  +   ++D VL+VF +SA+PP   + VL++ +  L+ GG +  RD                    YGLYDL+  R+A R+  +LY R DGTL YFFS E +  L  +  G++V    Y TV  VNRK Q+ ++R
Sbjct:    1 MTTKKSVELHSHDFEWEELARECQKEAEDTEDDAGEETEEM------ELSTIAKERWELFH-QRNHGKAYKPRNYLVKEFPELHDPANEQVRVLEVGCGYGSAIFPILDECPNVFADVCDFSAHAIDILHQNPQYNPQRCHAFVCDIT--QDDLGLPAESVDVVLMVFVLSAVPPTAFSEVLRKVSRVLKPGGVLCFRD--------------------YGLYDLAMRRNAKRLAPSLYYRSDGTLAYFFSREDIERLCGEELGLQVVENEYCTVRLVNRKKQVTMDR 259
[Close]
BLAST of jgi.p|Trimin1|352581 vs. uniprot
Match: G4Z0B0_PHYSP (tRNA N(3)-methylcytidine methyltransferase n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z0B0_PHYSP)

HSP 1 Score: 151 bits (382), Expect = 1.080e-37
Identity = 98/279 (35.13%), Postives = 139/279 (49.82%), Query Frame = 3 
Query:  108 HCSDFNWEDLRERVQALVEAKPVLTKAQAERVLRGRRRKGSDGCDCNWEAFYRMHDNANVYKPRRYVAKVWPQLVDP-RAGIARILELGCGYGSTLLPLLQLAPHLSAVGSDVSPLVVERLRRHPLFDAERCHAVVHDAAAAPIDAAVQPGTMDAVLLVFAVSAMPPARHAWVLQQAAAALRGGGCILLRDIIMLNXXXXXXXXXXXXXXXYGLYDLSQLRSANRIEGNLYAREDGTLTYFFSVEGVATLAAQAGVEVEACAYHTVANVNRKHQLKLER 941
            H  DF WE+L E+ + L +                      D     W+ F+   +N  VYKPR Y+ K +P+L  P R  +  +LELGCGYGS + P+L   P++ A   D S   ++ L+++P +DA RC A V D A   +   VQ  ++D VL+VF +SA+PP   A  LQ+  AAL+ GG +  RD                    YGLYDL+  R+A ++  NLY R DGTL YFFS E +     + G +     Y TV   NRK  + ++R
Sbjct:   11 HSHDFEWEELAEQCRTLED----------------------DSAKNKWDVFH-QRNNGKVYKPRNYLVKEFPELYAPEREVVVEVLELGCGYGSAIFPILAECPNVHAQVCDFSAHAIDILKKNPEYDATRCRAFVCDIAQEELQG-VQLESVDIVLMVFVLSAVPPGSFARALQKIYAALKPGGIVCFRD--------------------YGLYDLAMRRNAKKLGPNLYYRSDGTLAYFFSKENLEEQFEEGGFQTLENEYCTVRLRNRKKGVTMDR 245
[Close]
BLAST of jgi.p|Trimin1|352581 vs. uniprot
Match: A0A2D4C9A1_PYTIN (Methyltransferase domain-containing protein, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C9A1_PYTIN)

HSP 1 Score: 152 bits (384), Expect = 2.050e-37
Identity = 110/300 (36.67%), Postives = 152/300 (50.67%), Query Frame = 3 
Query:  102 EYHCSDFNWEDL-----RERVQALVEAKPVLTKAQAERVLRG----------RRRKG-SDGCDC-NWEAFYRMHD-NANVYKPRRYVAKVWPQLVDPRAGIARILELGCGYGSTLLPLLQLAPHLSAVGSDVSPLVVERLRRHPLFDAERCHAVVHDAAAAP-IDAAVQPGTMDAVLLVFAVSAMPPARHAWVLQQAAAALRGGGCILLRDIIMLNXXXXXXXXXXXXXXXYGLYDLSQLRSANRIEGNLYAREDGTLTYFFSVEGVATLAA-QAGVEVEACAYHTVANVNRKHQLKLER 941
            E H  DF+WE+L     RE +            + AE  L            +R KG +D C   +  A   +   +  VYKPR Y+ K +P+L  P  G  R+LE+GCGYGS + P+L   P++ A   D S   ++ LR+HP FDA RC+A V D   A   D  V   ++D VL+VF +SA+PPA  A  L++ AA LR GG +  RD                    YGLYDL+  R+A +I  +L+ R DGTL YFFS E +  L   + G+E+    Y TV  VNRK  + ++R
Sbjct:    9 ELHSHDFDWEELARECEREGLNGGALCAEAAPSSDAELELSALAKSRWDEFHQRNKGMADTCGTRSHRALTSLRRLSGKVYKPRNYLVKEFPELFAPERGQVRVLEVGCGYGSAIFPILAECPNVVADVCDFSASAIDILRQHPAFDASRCNAFVSDITRADAFDGHVAAESVDIVLMVFVLSAVPPAAFASTLRRIAALLRPGGVVCFRD--------------------YGLYDLAMRRNAKQIAPSLFYRSDGTLAYFFSREDIERLFVHELGLELVENEYCTVRLVNRKKAVTMDR 288
[Close]
BLAST of jgi.p|Trimin1|352581 vs. uniprot
Match: A0A6A3P3Q8_9STRA (tRNA N(3)-methylcytidine methyltransferase n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3P3Q8_9STRA)

HSP 1 Score: 150 bits (380), Expect = 3.270e-37
Identity = 97/278 (34.89%), Postives = 141/278 (50.72%), Query Frame = 3 
Query:  108 HCSDFNWEDLRERVQALVEAKPVLTKAQAERVLRGRRRKGSDGCDCNWEAFYRMHDNANVYKPRRYVAKVWPQLVDPRAGIARILELGCGYGSTLLPLLQLAPHLSAVGSDVSPLVVERLRRHPLFDAERCHAVVHDAAAAPIDAAVQPGTMDAVLLVFAVSAMPPARHAWVLQQAAAALRGGGCILLRDIIMLNXXXXXXXXXXXXXXXYGLYDLSQLRSANRIEGNLYAREDGTLTYFFSVEGVATLAAQAGVEVEACAYHTVANVNRKHQLKLER 941
            H  DF WEDL    Q   +    + + + +  L   ++   +  D  W+ F+   +N  VYKPR Y+ K +P+L  P   +  +LELGCGYGS + P+L    ++ A   D S   +E L+++P +DA RC A V D A   ++  V   ++D VL+VF +SA+PP   A  LQ+  AAL+ GG +  RD                    YGLYDL+  R+A ++  NLY R DGTL YFFS E +     + G       Y TV   NRK  + ++R
Sbjct:   12 HSHDFEWEDLAMECQTQEDNSVEVVQEKDKEGLLETQQLAKEAKD-KWDVFH-QRNNGKVYKPRNYLVKEFPELYAPERDVVEVLELGCGYGSAIFPILAECANVHAQVCDFSAHAIEILKKNPEYDANRCRAFVCDIAQEELED-VAAESIDIVLMVFVLSAVPPESFARALQKIYAALKPGGIVCFRD--------------------YGLYDLAMRRNAKKLGPNLYYRSDGTLAYFFSRETLQEEFERGGFRTLENEYCTVRLRNRKKGVTMDR 266
[Close]
BLAST of jgi.p|Trimin1|352581 vs. uniprot
Match: A0A1V9YNU6_9STRA (tRNA N(3)-methylcytidine methyltransferase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YNU6_9STRA)

HSP 1 Score: 150 bits (378), Expect = 4.010e-37
Identity = 104/286 (36.36%), Postives = 148/286 (51.75%), Query Frame = 3 
Query:   96 ASEYHCSDFNWEDLRERVQALV--EAKPVLTKAQAERVLRGRRRKGSDGCDCNWEAFYRMHDNANVYKPRRYVAKVWPQLVDPRAGIARILELGCGYGSTLLPLLQLAPHLSAVGSDVSPLVVERLRRHPLFDAERCHAVVHDAAAAPIDAAVQPGTMDAVLLVFAVSAMPPARHAWVLQQAAAALRGGGCILLRDIIMLNXXXXXXXXXXXXXXXYGLYDLSQLRSANRIEGN--LYAREDGTLTYFFSVEGVATLAAQAGVEVEACAYHTVANVNRKHQLKLER 941
            A+ +H  DF W DL    Q  +  EAKPV +   A+          S     +W+ F+   +N  VYKPR Y++K +P+L+   +    +LE+GCGYGS + PLL   P + A   D S   ++ LR +  ++ ERCHA V D  A  ID  V   ++D VL+VF +SA+PP+  A VL +   AL+ GG +  RD                    YG YDL+ +RS+ R+  +  LY R DGTL YFFS + +  +AA    EV    Y+TV   NRK Q  ++R
Sbjct:    4 ATTFHSHDFEWADLAATCQEALAKEAKPVESVDAAQL---------SALAQTHWDVFH-AKNNGKVYKPRNYLSKEFPELLSATS----VLEVGCGYGSAIFPLLAQCPTMRAHVCDFSRHAIDILRGNQAYETERCHAFVCDIVADEID--VPDASIDVVLMVFVLSAIPPSAFASVLAKVHRALKPGGLVCFRD--------------------YGRYDLAMMRSSKRLSDSDALYYRSDGTLAYFFSTDDITAMAAHR-FEVVENEYNTVRLRNRKTQASMDR 252
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352581 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CPC9_9STRA0.000e+099.72BZIP domain-containing protein n=1 Tax=Tribonema m... [more]
W2PX80_PHYPN3.110e-4035.61tRNA N(3)-methylcytidine methyltransferase n=8 Tax... [more]
A0A329SNH8_9STRA5.280e-4034.93tRNA N(3)-methylcytidine methyltransferase n=2 Tax... [more]
M4C1J2_HYAAE1.400e-3936.40tRNA N(3)-methylcytidine methyltransferase n=2 Tax... [more]
D0MVG2_PHYIT5.230e-3836.33tRNA N(3)-methylcytidine methyltransferase n=2 Tax... [more]
A0A8K1CAM5_PYTOL1.000e-3734.38Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
G4Z0B0_PHYSP1.080e-3735.13tRNA N(3)-methylcytidine methyltransferase n=1 Tax... [more]
A0A2D4C9A1_PYTIN2.050e-3736.67Methyltransferase domain-containing protein, putat... [more]
A0A6A3P3Q8_9STRA3.270e-3734.89tRNA N(3)-methylcytidine methyltransferase n=3 Tax... [more]
A0A1V9YNU6_9STRA4.010e-3736.36tRNA N(3)-methylcytidine methyltransferase n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_124contigContig_124:279295..290360 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|352581|estExt_Genemark1.C_Ctg_1240032
BRITEko00000,ko01000
KEGG rclassRC00003,RC00113,RC00392,RC01244
KEGG ReactionR02671,R02912,R03955,R04939
KEGG koko:K00599
DescriptionMethyltransferase small domain
COG categoryS
Max annot lvl4776|Peronosporales
EggNOG OGsKOG2361@1|root,KOG2361@2759|Eukaryota,3QAP5@4776|Peronosporales
Evalue4e-41
Seed ortholog4792.ETI40371
Hectar predicted targeting categoryother localisation
TranscriptId352903
TrackFilteredModels1
ProteinId352581
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352581gene_15963Tribonema minus UTEX_B_3156 geneContig_124 279295..290360 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_15963_1exon_15963_1Tribonema minus UTEX_B_3156 exonContig_124 279295..279479 +
exon_15963_2exon_15963_2Tribonema minus UTEX_B_3156 exonContig_124 280517..280599 +
exon_15963_3exon_15963_3Tribonema minus UTEX_B_3156 exonContig_124 281752..281865 +
exon_15963_4exon_15963_4Tribonema minus UTEX_B_3156 exonContig_124 282643..282816 +
exon_15963_5exon_15963_5Tribonema minus UTEX_B_3156 exonContig_124 283607..283682 +
exon_15963_6exon_15963_6Tribonema minus UTEX_B_3156 exonContig_124 284258..284317 +
exon_15963_7exon_15963_7Tribonema minus UTEX_B_3156 exonContig_124 284473..284586 +
exon_15963_8exon_15963_8Tribonema minus UTEX_B_3156 exonContig_124 285302..285436 +
exon_15963_9exon_15963_9Tribonema minus UTEX_B_3156 exonContig_124 287161..287286 +
exon_15963_10exon_15963_10Tribonema minus UTEX_B_3156 exonContig_124 287736..288275 +
exon_15963_11exon_15963_11Tribonema minus UTEX_B_3156 exonContig_124 289724..290360 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_15963UTR5_15963Tribonema minus UTEX_B_3156 five_prime_UTRContig_124 279295..279320 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_15963CDS_15963Tribonema minus UTEX_B_3156 CDSContig_124 279321..279479 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_15963UTR3_15963Tribonema minus UTEX_B_3156 three_prime_UTRContig_124 290303..290360 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352581Trimin1|352581|estExt_Genemark1.C_Ctg_1240032Tribonema minus UTEX_B_3156 polypeptideContig_124 279321..290302 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_15963 ID=mRNA_15963|Name=jgi.p|Trimin1|352581|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2244bp|location=Sequence derived from alignment at Contig_124:279295..290360+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CACAGGTGTTGGGGGATAGTCTTGCTATGGCGCGTTTATCGACGGAGAAG
TACAGCCACTGGGAGCTCTCAGGGCAGCGAATGACGTCCGCTATCGCCTC
TGAATACCACTGCTCTGACTTCAATTGGGAGGACCTCAGAGAGCGTGTGC
AAGCCTTGGTTGAGGCCAAGCCTGTATTGACAAAAGCGCAGGCCGAGCGG
GTCCTGCGCGGCAGACGACGAAAGGGATCCGACGGCTGCGACTGCAACTG
GGAGGCGTTTTACAGAATGCATGACAACGCAAACGTCTACAAGCCCAGGC
GCTATGTCGCCAAGGTGTGGCCACAGCTCGTGGATCCGCGCGCTGGCATT
GCGCGCATCCTGGAGCTTGGCTGCGGCTATGGGTCAACACTACTGCCGCT
GCTGCAGCTGGCGCCGCACCTGTCAGCCGTGGGCAGCGACGTCAGTCCGC
TGGTGGTAGAGAGGCTGCGGCGGCACCCGCTGTTCGACGCTGAGCGCTGC
CATGCTGTCGTGCACGACGCCGCTGCCGCTCCCATCGATGCCGCGGTACA
GCCGGGGACAATGGATGCGGTTCTGCTGGTATTTGCTGTGTCAGCGATGC
CGCCGGCGCGTCACGCGTGGGTACTGCAACAGGCAGCGGCGGCGCTCCGC
GGCGGCGGCTGCATCCTGCTGCGTGACATTATCATGCTCAACGCAGCGGC
GGCGCTCCGCGGCGGCGGCTGCATCCTGCTGCGCGACTACGGCCTGTACG
ACCTCAGCCAGCTGCGGTCTGCGAACCGCATTGAGGGGAACTTGTATGCG
CGAGAGGACGGTACTCTCACGTATTTCTTCAGCGTGGAGGGCGTTGCAAC
GCTCGCTGCTCAGGCCGGAGTTGAAGTAGAGGCGTGCGCCTACCACACCG
TCGCCAACGTCAACCGCAAGCACCAGCTGAAGCTGGAGCGCGCCATGGGT
TGTAAGAAGAGGCGCAGGGCCAAGGACCAGGACACCCTGCAGAGGGCCAG
GGAGCGCAACAAGCTCCACGCCAGGCGCACGAGGGAGCGCAAGAAGGAGT
TCATGTCGTCTCTGCAGCAACGCCTCACGGAGGTGAGGGACGAGCTGCAG
CGGCTGAGGGAGGGCCTTGGAGCGCCTTCGAAGGCAACCGCCCTCGAGGT
TTTGGACGCAGCCGGCATCAGGCGCACGATCTGCCTGGACGCAATTTTGA
GACAGTTCGACGCCTCCCCAGGCGGAGGCGTCTACCACTTCGACGAGAAG
CTATTTGGCTGGATGCTCCCCAAGGCCGAGCAGCAGCATGACCCCGACAA
GACGGGGTCCGTGGACGGCGATCTGGACCACGGCGATGCAATGGATGACG
ATGCTGCCGCTGACCTGGCAGCTGCGGACGCCGGCGGCGACGCGGCCGAC
CCTGGAGCTGCTGGTGGCGGAGATGCAGCAGCGGACGATGGTGGCAGCAG
CGGCGGCAGCGCGGCGCCGCGCGGCAGGCGGCTGCAGGGGCTGAGCGCTG
TGGAGAAGCAGCAGGAGAGGCGCGCGCGCAACCGCATCCACGCGCGGCGC
ACGCGCGAGCGCAAGAAGCAGCTGCTTCAGGCAAGCCACCATGCCAATAC
TCCTCTGATCACGCAGACGGCGCTACACCTTGCCTCAGCTGAAATTGAGA
GCCTGCAGCGCGGCGGGCACTCGCCCCCGCGGACGCCCCCTCACTGGCCC
GCCGACTTCAACTCCGACTTCAACTTCCCCGGCCACTCCACCACCAACAG
CGACGGCAACAGCGGCAGCGACGGCGGCGGCAGCGGCGGCGGCAGCGGCG
GCGGCAGCAGCGGCGCCGGCAGCAGTCGCCACCCCCGCGCCACGAAGCGC
ATCAAGCTGAGCCCCACGAAAACGGTGTCAACAGACGGCAACAGCGACAG
CGACAGCAGCGGCGTCGCCGGCCGCTGCGGCGATGACGCGCTGTCCATCG
CGGAGACCGCGCTGCTGCTGCTGCGCTGCGGCGCTGTGAGCTCCGCCTCG
TGGCGCGCGGACGACGGCGCCTGTGTCTTTGGCACTCGCTCCGCGCCAAC
GCAGACGCAGTGGGACTGGGGGGACGCGGTAGCGTTCGCAGGCGGAAGGG
ACGGCGTGCTGGTGCTCGATGGGCAGGGCAGCGGAGGCAGCAGCGGCGGC
GGCGACGGCAATGGCGGCAAGTTGATGGCAGGATAATGGCTTTCGGGGCT
AGGCGGCGGCGGCGGCGGCGGTTTTCACGCTCAGCGGTGGCGGC
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protein sequence of jgi.p|Trimin1|352581

>Trimin1|352581|estExt_Genemark1.C_Ctg_1240032 ID=Trimin1|352581|estExt_Genemark1.C_Ctg_1240032|Name=jgi.p|Trimin1|352581|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=720bp
MARLSTEKYSHWELSGQRMTSAIASEYHCSDFNWEDLRERVQALVEAKPV
LTKAQAERVLRGRRRKGSDGCDCNWEAFYRMHDNANVYKPRRYVAKVWPQ
LVDPRAGIARILELGCGYGSTLLPLLQLAPHLSAVGSDVSPLVVERLRRH
PLFDAERCHAVVHDAAAAPIDAAVQPGTMDAVLLVFAVSAMPPARHAWVL
QQAAAALRGGGCILLRDIIMLNAAAALRGGGCILLRDYGLYDLSQLRSAN
RIEGNLYAREDGTLTYFFSVEGVATLAAQAGVEVEACAYHTVANVNRKHQ
LKLERAMGCKKRRRAKDQDTLQRARERNKLHARRTRERKKEFMSSLQQRL
TEVRDELQRLREGLGAPSKATALEVLDAAGIRRTICLDAILRQFDASPGG
GVYHFDEKLFGWMLPKAEQQHDPDKTGSVDGDLDHGDAMDDDAAADLAAA
DAGGDAADPGAAGGGDAAADDGGSSGGSAAPRGRRLQGLSAVEKQQERRA
RNRIHARRTRERKKQLLQASHHANTPLITQTALHLASAEIESLQRGGHSP
PRTPPHWPADFNSDFNFPGHSTTNSDGNSGSDGGGSGGGSGGGSSGAGSS
RHPRATKRIKLSPTKTVSTDGNSDSDSSGVAGRCGDDALSIAETALLLLR
CGAVSSASWRADDGACVFGTRSAPTQTQWDWGDAVAFAGGRDGVLVLDGQ
GSGGSSGGGDGNGGKLMAG*
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mRNA from alignment at Contig_124:279295..290360+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_15963 ID=mRNA_15963|Name=jgi.p|Trimin1|352581|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=11066bp|location=Sequence derived from alignment at Contig_124:279295..290360+ (Tribonema minus UTEX_B_3156 )
CACAGGTGTTGGGGGATAGTCTTGCTATGGCGCGTTTATCGACGGAGAAG
TACAGCCACTGGGAGCTCTCAGGGCAGCGAATGACGTCCGCTATCGCCTC
TGAATACCACTGCTCTGACTTCAATTGGGAGGACCTCAGAGAGCGTGTGC
AAGCCTTGGTTGAGGCCAAGCCTGTATTGACAAAAGTGAGAACCACACAT
CATCTGCATTTGCAGTTGCTCAGCTGTTTCGGATCAAACCGTCACACACG
CAGCTGCAAGTCGCGTCGGTGCTGTTGTCGAGTTGATCTGCGAGGACTCC
TGTGAGCAGCAAAGGCTTTCAAAGCCAAGTTAAAATATATGGAGGGTGTA
CAAAAGTTTAATGGCAATGCGCACTTCGCTGTAAGTAAAAACGCTGCAGT
GTCATTGGCAGCGACTGATGGCGTCTACACCGCACTTGAAGCTTTGGGCG
ATCAACAATGTCTGAATGATCAATCCGTGTGCATGTCCTGCTAGAACAAG
TTTGCAGCAGCAGTAACAGCATCTCCACACACCATGTCACACACGCGGTG
TCCATATACATTGCTTCACACAGGCAGGCATTGGCAGCAAATGGTGTCAT
ACCGCACTAGAGTGTTCAGGCGATTTACGAGTAAATTAATATGATCACAC
AGGCCTGCTGGAACAGGTTTGTAGCAGCAGTAGCAACAACATCTCCAGAA
ATCATGTCAGACAATGCAATATCCATGACCATCGCTTAACGTAGGCAGGT
CGAGTCATCAGTCACCGCCACAAATGTGCTCACACGGCGGTGCCAGCAGC
CACCTGACGGCTACATGCAGAACCTTCCATGTCACGCGAACTCAACCAAA
TCCAGAGGCGGTGCACCAGACAAGCAGAGGCATCATCTGTCCTACTCAGA
CGTACCTAATGGTGATAATGTAGCGTAGACATCGACCAGGTGTCATTACT
AAACCTGCTCTGGTTGATTGATCTTGTTTGTAAATTATGAATCAGTAAAC
AATGTTCTGTACAGCTCTGACGCACATTATTCGGTCTTAGCGATGAAGCC
TGTTGACTGCTCAGCGCAAGGGCAGGTTTGCCGATCTGGTGGAGCGCTGC
TGCTCAATGCAATGCGAACCGAGCCAAAATTGAGCGCCGCTGCTTACTGG
CCATGCTGCCCCCGCCACATCAGCGCCCCTCACTCTCTCTGTTGTGTGCG
CTGTGTGGGCCTTGCTGTGCAGGCGCAGGCCGAGCGGGTCCTGCGCGGCA
GACGACGAAAGGGATCCGACGGCTGCGACTGCAACTGGGAGGCGTTTTAC
AGAATGTGAGCCGCGGCGAAGGTCCATTGCAATAGATCCCTCTTGCTGCA
AATAGGGGTTGCACGAAAACGTGTTTGGCCACACAAATTCGGCGCAGTTT
GGGCGTATTTGGCAACCAGGACTACGTCTAGAGCAAACCTCAACATGATA
ACATGCTGCGCGAAAGGCATATTTGTGGGGCATGTGGTGAGTCTGCTCGA
TTCCAAGCATACAGTCCACAACAAAAGGGGCTCTTGAACTCAGAAATAAA
CTTCAGAATACGTTCTTTTGCAACCCTCCTCTTGCTCCAAGCGCAGCACC
GTCCACGTTGCAGGCTTCATACCATCCAATACATGAAGCACAGTGGTGCC
AGAATCTGCTCTGTGGGGGCGAATGCAGCACGCCGGAAGTGTATGTCTGC
CGCAACTGTGCGGCAAGTGCGCATTGCCGTAGGGTAAAGGTTGAGGCTAC
CCTGAGGCATTGTGCCGTGCCGTCTGCGGGGACGTGCGCGAACTTCGCGC
ATTGCGCATCGCAGCGGTAGCTCTTGCGCACGCAGCAGCAGCGCTCGCGC
GACTGGCAGCGGCGCGGATACCCTCAGCAGCAGCGCTCAAGCATTCAGTA
GCAGTGCTCAAGCACTTGGCAGCAATGCAGTGACCGCTCTGCCCTCTGTC
CACCCATGTCGGGAAATCATCATGTGCTGCGGACGCGTGCCATATGCCTT
GCTGAGCAACCTGCACGCTTTCGAGCGAGCACCGAAGATGTAAACCTGCC
CATTGCGCGCTGCACGCTGAGGTTTCACGTGCGTGCCGACGGTCGTGCGC
CCGCATGCGCCGCTTCACAGGCGTCTCGCATCACATGCACAAGTACATTT
ACAAACAGCCGCTTCGCATGCGCTACCAGCTGTGCCACACGCCGCGTGCA
CGCGCGGATGAGCATCTACATGTCATGCATAGATGCACACACACGCATAA
AAAATATCGCATGTACACACATGCACACATACATATACTCACACGCGTCT
TGCTGGCCCCAGTGGATGGCCAGCGCACGCTCCACCTTCTGCACTATCAA
GTGCAGGACATCGATCGTGAAACAGCGACTGTAGCAACTACTAGCCTACT
GAGAAGTGCATTGTGCTGTCGACTGTATTCATTTCCGTTGCCCCCCGTAC
TTGCCAGGCATGACAACGCAAACGTCTACAAGCCCAGGCGCTATGTCGCC
AAGGTGTGGCCACAGCTCGTGGATCCGCGCGCTGGCATTGCGCGCATCCT
GGAGCTTGGCTGCGGCTATGGGTGAGTTGAGTGCTTGTGTCGGCTTTGGT
CGCCACGATTGAAGTTCAGTCTTCATTATTTAAAGTTTCATGAAGACAAA
TCAAAAGATCTTAGAGCTCTAGGTGACAAGGAGTGGTTAGCCGCAAGTGC
CTTCCAGCAACAATTTTATATCGCGACTTGATTTCGAGCCGTAGCTTCCC
ATTCTAGCCTCGTGTGTCGTGTCACTACGGATGTGTTTTCGACGTTGATG
ATGATAAGACATGTGTGGATGTACGTACATGGATCTGGATGCATTACTTT
ACAGAAATGCAGTCCATGCATCGCTTGCATCACAGCTTAGGTTAACAATG
CTCAGGCACAGGAATATTGTCCCTCAAGAGACTCAGTTCAAAGCCTCGAT
GTGCAGTCAACTTGTCTGGACACAACGCCAGACATACCATCTGCCACTGC
ACGCAGTGCCAAAATCCGGCTATGCTCAGCAGTAGACGTCAATGCAGGCA
GTCTTGACTCGAAGTCTGTCAGTATGTGAACTTGAGCCACTGGCAGGGTG
GGGTTGAGAGTAAAGGAGAGGTTCCTGACCCTCAGCTAGCACTAACGCTT
ATTGCAGACAACATGTGGAAACGCAACCAAGCATTTGGAAACGCAACCAA
GCGTTTGGAAATGCAACCGCATTTGGAGATGGAACCACAGCACACTTGAA
ATGCAACCACACCAGGGCAGTCGGATTTCGTATTGGGCTAGGTTTAGGTA
TACTCGCCCTCACTATCATTCCCGGCCATTACCGCCTACCACCCACAGGT
CAACACTACTGCCGCTGCTGCAGCTGGCGCCGCACCTGTCAGCCGTGGGC
AGCGACGTCAGTCCGCTGGTGGTAGAGAGGCTGCGGCGGCACCCGCTGTT
CGACGCTGAGCGCTGCCATGCTGTCGTGCACGACGCCGCTGCCGCTCCCA
TCGATGCCGCGGTACAGCCGGGGTGCGTGCGTTGCATACAACTAGATGAG
GAGCAGTATTGCACACGCATGTGGGGCAGAGCACAAAGCAGTCACGTGAT
GTGGTGGCACTGTTTGACTCGTCGCCAATTGCCGCAGCAGCGGCGACCAT
GGTGATTGGTGGAAGGCAGTTGCGGCTAACCACGCCTTGTCACCAAGAGC
CCTGCGATCTCTTGATTCGTTTCCATGCACTAGATGAGGAGCGGTATTGT
GCGCGCATGTGGGGCAGAGCACAAAGCAATTATGTGCGAACTTGACGACA
CGAGGCGATATGCTCATGGGCATTGCGCCCCTCAGCCACCACCAATATTA
GCAACCCAGCACTCTGCGGCGAAGCGCGGCGACTGACCGGGGTGGCCATC
GCTGCACGCCACGCCGCACCTGTTGCGTGTACATACGCACACATTTGCTG
CAGCACCTGTCAACAGTGGTCAATGTCCACAGGGGCAGTGGTATATTCTG
CATCAAGGGGGCTTGCACAGCACAGCGCAACTGATCTAACGACGCACTAT
GCCACCGCATGCACAGGGAGGACCACCATAGGCCCCTGCTTTGGCAGCAA
GGCCACAATCCGTTTCTAGGCCTTTGCGCGTTGCAAGCACCAAACGAACC
ATGTATACTTAGTACGCGTTACCTGCTGTCAGAATGATGCTTGTAATGGG
GTCTTGCAGCACAGGTGAGTGGCGAGGCCATGGCGTGGCACTTCAACCCG
CAAATGACCTATATACTACTTGAAGCATGTCGACGCTGACTTCCGTGCTG
CTGTACTCGCAGGACAATGGATGCGGTTCTGCTGGTATTTGCTGTGTCAG
CGATGCCGCCGGCGCGTCACGCGTGGGTACTGCAACAGGTGCGTTCGCGC
TCTTTTCAAGCCGCTGCTGCCTTGGCCGCTGAGTGGTCACTGCACCCACT
TTTTGTGACAAAATACACAATCAACAAAATCAACTCCTCACTTCACAGTT
ACGTGTTGATGTACGTGTAGGCACAATATGCGCGTCATCGCATCATGACC
GGCCTGGAAGCCAGGTTTGCTCAGTGCGCGCATGGCGGTGTACTGGCGGT
ATCACCTGATGCCTGCGAGGCCAACACTACTAATGTGAAGCACGCTCGCC
GAGCGTTGCTGCGCTGCGCATGCGAGGTCATGTCAATGCATGAATTCGGT
CATGCGGATGGGGCCGCAGCTCTTGGTCCTAGCGACCATCAGGGCTTTCA
TAAGTGCGGCTGTGCTTCTACATGTAGGCGTTGGGGCAAACGCATTTACC
ATGGAGCGGGGGGGGGGGGGGGGGCAGCTGATGAGTCGGCGGCCTCTTGA
ACATTATAGCCTGTTGTTGGAATCCGCAGTCTCACCTGCACTGCCGAAAT
ATTCATCTGCTTTCGAACGATGCAGCCCCGTCTGCACTTCCGTGCCGTGC
TGATGTGTCACAGGCAGCGGCGGCGCTCCGCGGCGGCGGCTGCATCCTGC
TGCGTGACATTATCATGCTCAACGTGTGTCGCCACACCCTGTGAGCTCCG
AAAGCTACACGATTCAGTTTCTGAAGGAATGCACAGCTTGTCATAAACTG
CCAAACTGCGAACATGGCGGTCTGCTTCTGAACAATGCAGTCTCGTCTGC
ACTTCCGTGCCGTGGTGATGTGTAACAGGCAGCGGCGGCGCTCCGCGGCG
GCGGCTGCATCCTGCTGCGCGACTACGGCCTGTACGACCTCAGCCAGCTG
CGGTCTGCGAACCGCATTGAGGGGAACTTGTATGCGCGAGAGGTGCGGGT
GTAAATTTGTTCAATGTTCACGAGCGCATACGCTGCATGTACTCAGCAGT
ACTGCGTGAAGAACTAGCTTTTGGCTTGCGATGAGTGAATGGCTCAGCCA
TTTAGGGCAAATTGTATGCATTGGACACGCACAAGTCACAAAGTGTGATG
CATTTATTATTGCCACAGTCACGGAAACCAATAGTTTAGAATGATCAGTA
CACTTCTATAGTTGGAAACTTTACTGCCTCATCAAGGAAAATGCAACTCA
GACTGCTCAAGTAGGCTAAATTGTACATCGCATAAGCTCCGCAATGTCGC
TTCATGGCTCACACCACCGTGTGGCTCCGAGGCACTGGTCATGATGGCGT
GGCTTACTGGCTGACTCATGGCATGTTGTACTGACTCGTTGTTGAGGGTG
CCGAGGCGCAGGTACATGCAATTGCCCAACTGCCTGACAATTGCGCAACC
TGCGTCTGTTGAAGTCTCCATGCCTGCTCTTGAACATGCTCTTCCGCTCT
GTTGCTTCCCTGTCAGGCAGCCCTCTCTATACCCCGCGGTTGCTTGCGTG
AGGCTCCATGTCAAGAGCATCAGGATTGCCATAATGATCGTTAAGACATC
AGCATCGCCACATTGTCGTGCTCCTCTCACTTTGCAGGATGGTATGCCAT
AATAATTGTCAAGAACATCATGATTGCCATATTGCCATGCTCCCCCTCGC
TTTGCAGGACGGTACTCTCACGTATTTCTTCAGCGTGGAGGGCGTTGCAA
CGCTCGCTGCTCAGGCCGGAGTTGAAGTAGAGGCGTGCGCCTACCACACC
GTCGCCAACGTCAACCGCAAGCACCAGCTGAAGCTGGAGCGCGTATACCT
CACTGCGACATTGCGAAAACCCGCAATACCCATATGTGCTGAGGAGGGCA
CGACGGTTGATGCACCGTGTCAGGCAGCGCCGGTAGCACGCGCTGGGATT
GATGATCCTGCGCTAGCGTGCAAAGACAGCATCACAACTTCATCAAGTGG
CAAAAGCGATAAATGTACATGAAAGAAAAGCCTCATGCTCTTTTTGCACA
ATGAACTCCTCTCATTTCTGGTCTCACAGCGCATATTGTGTGTGTGTGTA
CGTGCCTCCGTTGCATTATTCTTGCACTGTCACACGGTCCTGTGTAAAAA
CCTGGCACGTTGCCTTCCCATGATGAACACAGCTGTTTCAGGCTGGCACA
CATCATGATGGCGGCGCGTGTCACAAGACAGCGCCAGTGCTTTGGCAGTT
CAATGCAGTTCCCAGCCTGAGCATTTACACGCACACGGTGAGCCCAACAC
ACCACGTGGCAGTCACTGTTGCAGAGCACTGCGCTTGCTCTCAACCTACA
TACTGCTCATCACACTCGAATGCCACGCATCTCAGTAATTGTCGCTGAAA
AGTTGAGCCGCGACAGCGCGCGTGAATGGCACCAGCCCCTGCCGGGACCA
TGCCTACTGGTGCAACAGCTTCGTTACACACGCAGACGCACAGCCACCCA
CATCAACTTGAACGCTTGGCGGTGTGTTCTGCAAACACTATGCAAGTGAA
TGGCAGCGACAAAAAAGCACTCAGGTCAACACACTTTCGCTGCTACAGGT
AGTGTGAAGCAAGCTGTCTGTGCTGGCAGTTCAGAATGTCTGGAGCTGTG
TGCACAGTGGTTCAAATGGATTCCACCTGGCACCACCACCAACCTGGCAC
CACAACATGGTGGCCAAGGCGGCCTTGAATCTACTGCGGTGCGCTGGTGC
GCGCTGGCTGTACTTTTATTAATTTCGCTTCGCAAGGGGCGCGAAAAGCC
CTCTCTTTGGATGTGCACTCAATGCAACATTCCTTCTCCGAAGAGAGACT
CAACCGCAAACAGGCTTCCCCCTCTTCTGGCTGTACTACTAGTAGAGTTG
TTTCCCTGCACAGCATACATTCGGCAAAGGGCCAGTATGAATACAGAGGG
TAGTATGCTGCCCCCACTACACTTGTGAGTGAGTCACGTCATGCATGCTC
AGAGTACTGTTGCTGGGGCAACAGCATCATTGCTCAGCATGATAACCCCT
CACTGTCACTGACAGGCTTAAGTATATAGGTCCCCGCGGCCTACAAGTAG
GTGCTGTACAAACATCTACTACTTTTACATTGATGCAGTTGTGGTCGGCA
CTGCACTGCTGATGCCGCTTGGCATGCACCACACCGCCATGGTGTTGTGT
ATGGTCACCCCCCGGCACCCGGTCCGGTGCACTGCGCCCCCGTCGGGCCC
GATTGGAGAGGGGGGGGGGGGGTCCTTCTGAACAAGATTTGCACTTTTCA
AACAGCAACAAGAAGACCGTCACAGAGGAGTCACGCTACTGAAAGTGAAA
GTGGATGTTCTGCTCTAAGCGCAGACTAGGTACACACACGCACCCACTCA
ACACTGATGGCCAGCACGATCCAGCACTGCTTCTGCTGCACTAGTGACGC
CTGCGGCGGAAGCCCCTGAAGCGCACAGCGTTCCTCAGCCACGTGTTGGT
TTCCGTGCTTCCAACCAAGGGTCTGCAATGTCCGTGGCACTGGACCCCAA
CGGTGATGGTGGCGAGGCCATGGGTTGTAAGAAGAGGCGCAGGGCCAAGG
ACCAGGACACCCTGCAGAGGGCCAGGGAGCGCAACAAGCTCCACGCCAGG
CGCACGAGGGAGCGCAAGAAGGAGTTCATGTCGTCTCTGCAGGTGAGGAA
CAGAAGCAGTTATTGTTTGGATGTGCCAGCACACGTGCGTAGCTTTTCCG
TACCACAGCATACTATCGTCGTTAGGTACACCTCGACAGCTCCATCCGCT
TCGCTCTTGCACGTGCTGCTGCGTGCGTTCTTGGCGTGGCAGTATCCGGA
GTTGAAGAAAACTGTCAGGTGTGGCCAGCGCACAGAATTGCTGTAAGACG
CCCACCAGCAGCAGTTTTTTGTGGATGATTGTCCGGCATTGCCGATCGCC
CTTCCATCTGCAATGCCTGGCTGATACCTCTCGTTTCTGGTTGCATGCGA
TGACGCGTCGACCAGTCATTGCAGGAGCTCTCCGACCGTTTGCTGACTGC
CGTTTTGCTGCCCTGCTTGACTGTTCCACATCCTTGTGTTTCCCCATATG
TAACACGCGTAATGCTATTGATGCCTGCTTTCCCCATGCAGCAACGCCTC
ACGGAGGTGAGGGACGAGCTGCAGCGGCTGAGGGAGGGCCTTGGAGCGCC
TTCGAAGGCAACCGCCCTCGAGGTTTTGGACGCAGCCGGCATCAGGCGCA
CGATCTGCCTGGACGCAATTTTGAGACAGTTCGACGCCTCCCCAGGCGGA
GGCGTCTACCACTTCGACGAGAAGCTATTTGGCTGGATGCTCCCCAAGGC
CGAGCAGCAGCATGACCCCGACAAGACGGGGTCCGTGGACGGCGATCTGG
ACCACGGCGATGCAATGGATGACGATGCTGCCGCTGACCTGGCAGCTGCG
GACGCCGGCGGCGACGCGGCCGACCCTGGAGCTGCTGGTGGCGGAGATGC
AGCAGCGGACGATGGTGGCAGCAGCGGCGGCAGCGCGGCGCCGCGCGGCA
GGCGGCTGCAGGGGCTGAGCGCTGTGGAGAAGCAGCAGGAGAGGCGCGCG
CGCAACCGCATCCACGCGCGGCGCACGCGCGAGCGCAAGAAGCAGCTGCT
TCAGGCAAGCCACCATGCCAATACTCCTCTGGTGTTTAGTTGGTTGTAGC
AGTTGGTGAGAGCGTTTGACTGCTGTTCGACTGGAAGTGCTGGTGGTTGT
TTCAAATCATTGTGCGGGGCTGGTGCACTGGGTTGTCAGGGTTGGTGTAA
TTATGTGTGATTCGGCTGTACCAGTTTGGGTGCAGGAGCAAAGCGGTATG
TATGTACTTGACGTTGTACAGCAGTCATTATCACCACTGTTTATTTGCAA
GTTGGCAAGTAGCAACATTGGCCTCTTTCAGCCAACCGCGATTCTTCAAT
AGTTGTATTGCAGACTACACAGGCACATTGACGCATGTGACAATATGTAC
CCATGTACAAGTACTGTGCTCAAGAAATAAAACGTCTGGATGAAATTCAC
CAATATTCACTGTGCTCAAGGAATGTAGCGTCTGGATAAAATTCACCAAT
ATTCCGGTAGATAGTGCGCTATCTGGTGCAAACCGGCCGCAACTTTTGTC
ATCAGTGATGCGCGCAACACTCGTTGGTAGTTATCACGTGTACATATCGC
AGCACCAGTGGTGTGGTGAGGGGGGTGCACCCTCACCAGTCGACCTTGTA
GACCTCGACATTTGTGTCTGGCGCGCTCTCACAACATCTGTAAACGTAGG
TGATGAACGAATGTGCAGTAGAGTAGGAAGTGTAGGTCGCATCAGACAGG
TAGGTAGGTACAAGGTCATCTCAAGTGCGCGCTTCATGGCTTACCTCTGT
CTGTCATCTTGTGTTCAGCCAACCATGAGGAGCATAAGCTAGTGAGCTCT
CAAGAGCGATGCTCGGTCATCGCGTGCCGCGATGGTCTAGGTCAGGTTTC
AAACACTTCAGATGCCATGACAGTGAGGTTTATTGACTGCCCATACCATC
ATCGTCTCTATTTCTATAGCAAGACTTCATTGCCTTCAAGCAGTATGGAA
ATGAGAAGCTGATATGAAATCCAATGATTTTGATGCCTGTTGTTGGCTCA
TCAATCCACCAACTGCCTTTATTTGCTGTTCTGGCTTCAAAACGGGCTGT
TGTGGTCCTGGCATTTAACTAGTCTGGCGTGGTTGAAGGCTTTGAATGGA
GAATGCAACATTTACACTCGCGTTCGGCCATAAGATATGGGGCAACAGTC
AGGAATGGGCTGCTGCCATTGCGCCTGTGCCGCCGTAACTCAGCCGCAAA
GGACTGCAAACTTGTTTGGAGCAGTGCGAGACTATTATTCCTATTTGCAA
TCACAGAGGAGTAGCTGCTGCTTTGCCATCCTTGTAATTCAGATATGGGT
TGCCTGCACACAGTCTGGCCTGGCCCCAGGTTTGTAGCCCAGGAGCGTGG
CCCTGTGCAAAGAACCGTGAGCCGTGTTGCCCGATCCCCTGCATCAGCGC
CGGACCCCCTTTTCATCCAATTCTAGACTCGCCCTTCTGACCTTGTACGA
CTCCATTGCGTCGTCCCAATTGCATGCAGATCACGCAGACGGCGCTACAC
CTTGCCTCAGCTGAAATTGAGAGCCTGCAGCGCGGCGGGCACTCGCCCCC
GCGGACGCCCCCTCACTGGCCCGCCGACTTCAACTCCGACTTCAACTTCC
CCGGCCACTCCACCACCAACAGCGACGGCAACAGCGGCAGCGACGGCGGC
GGCAGCGGCGGCGGCAGCGGCGGCGGCAGCAGCGGCGCCGGCAGCAGTCG
CCACCCCCGCGCCACGAAGCGCATCAAGCTGAGCCCCACGAAAACGGTGT
CAACAGACGGCAACAGCGACAGCGACAGCAGCGGCGTCGCCGGCCGCTGC
GGCGATGACGCGCTGTCCATCGCGGAGACCGCGCTGCTGCTGCTGCGCTG
CGGCGCTGTGAGCTCCGCCTCGTGGCGCGCGGACGACGGCGCCTGTGTCT
TTGGCACTCGCTCCGCGCCAACGCAGACGCAGTGGGACTGGGGGGACGCG
GTAGCGTTCGCAGGCGGAAGGGACGGCGTGCTGGTGCTCGATGGGCAGGG
CAGCGGAGGCAGCAGCGGCGGCGGCGACGGCAATGGCGGCAAGTTGATGG
CAGGATAATGGCTTTCGGGGCTAGGCGGCGGCGGCGGCGGCGGTTTTCAC
GCTCAGCGGTGGCGGC
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Coding sequence (CDS) from alignment at Contig_124:279295..290360+

>mRNA_15963 ID=mRNA_15963|Name=jgi.p|Trimin1|352581|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2160bp|location=Sequence derived from alignment at Contig_124:279295..290360+ (Tribonema minus UTEX_B_3156 )
ATGGCGCGTTTATCGACGGAGAAGTACAGCCACTGGGAGCTCTCAGGGCA
GCGAATGACGTCCGCTATCGCCTCTGAATACCACTGCTCTGACTTCAATT
GGGAGGACCTCAGAGAGCGTGTGCAAGCCTTGGTTGAGGCCAAGCCTGTA
TTGACAAAAGCGCAGGCCGAGCGGGTCCTGCGCGGCAGACGACGAAAGGG
ATCCGACGGCTGCGACTGCAACTGGGAGGCGTTTTACAGAATGCATGACA
ACGCAAACGTCTACAAGCCCAGGCGCTATGTCGCCAAGGTGTGGCCACAG
CTCGTGGATCCGCGCGCTGGCATTGCGCGCATCCTGGAGCTTGGCTGCGG
CTATGGGTCAACACTACTGCCGCTGCTGCAGCTGGCGCCGCACCTGTCAG
CCGTGGGCAGCGACGTCAGTCCGCTGGTGGTAGAGAGGCTGCGGCGGCAC
CCGCTGTTCGACGCTGAGCGCTGCCATGCTGTCGTGCACGACGCCGCTGC
CGCTCCCATCGATGCCGCGGTACAGCCGGGGACAATGGATGCGGTTCTGC
TGGTATTTGCTGTGTCAGCGATGCCGCCGGCGCGTCACGCGTGGGTACTG
CAACAGGCAGCGGCGGCGCTCCGCGGCGGCGGCTGCATCCTGCTGCGTGA
CATTATCATGCTCAACGCAGCGGCGGCGCTCCGCGGCGGCGGCTGCATCC
TGCTGCGCGACTACGGCCTGTACGACCTCAGCCAGCTGCGGTCTGCGAAC
CGCATTGAGGGGAACTTGTATGCGCGAGAGGACGGTACTCTCACGTATTT
CTTCAGCGTGGAGGGCGTTGCAACGCTCGCTGCTCAGGCCGGAGTTGAAG
TAGAGGCGTGCGCCTACCACACCGTCGCCAACGTCAACCGCAAGCACCAG
CTGAAGCTGGAGCGCGCCATGGGTTGTAAGAAGAGGCGCAGGGCCAAGGA
CCAGGACACCCTGCAGAGGGCCAGGGAGCGCAACAAGCTCCACGCCAGGC
GCACGAGGGAGCGCAAGAAGGAGTTCATGTCGTCTCTGCAGCAACGCCTC
ACGGAGGTGAGGGACGAGCTGCAGCGGCTGAGGGAGGGCCTTGGAGCGCC
TTCGAAGGCAACCGCCCTCGAGGTTTTGGACGCAGCCGGCATCAGGCGCA
CGATCTGCCTGGACGCAATTTTGAGACAGTTCGACGCCTCCCCAGGCGGA
GGCGTCTACCACTTCGACGAGAAGCTATTTGGCTGGATGCTCCCCAAGGC
CGAGCAGCAGCATGACCCCGACAAGACGGGGTCCGTGGACGGCGATCTGG
ACCACGGCGATGCAATGGATGACGATGCTGCCGCTGACCTGGCAGCTGCG
GACGCCGGCGGCGACGCGGCCGACCCTGGAGCTGCTGGTGGCGGAGATGC
AGCAGCGGACGATGGTGGCAGCAGCGGCGGCAGCGCGGCGCCGCGCGGCA
GGCGGCTGCAGGGGCTGAGCGCTGTGGAGAAGCAGCAGGAGAGGCGCGCG
CGCAACCGCATCCACGCGCGGCGCACGCGCGAGCGCAAGAAGCAGCTGCT
TCAGGCAAGCCACCATGCCAATACTCCTCTGATCACGCAGACGGCGCTAC
ACCTTGCCTCAGCTGAAATTGAGAGCCTGCAGCGCGGCGGGCACTCGCCC
CCGCGGACGCCCCCTCACTGGCCCGCCGACTTCAACTCCGACTTCAACTT
CCCCGGCCACTCCACCACCAACAGCGACGGCAACAGCGGCAGCGACGGCG
GCGGCAGCGGCGGCGGCAGCGGCGGCGGCAGCAGCGGCGCCGGCAGCAGT
CGCCACCCCCGCGCCACGAAGCGCATCAAGCTGAGCCCCACGAAAACGGT
GTCAACAGACGGCAACAGCGACAGCGACAGCAGCGGCGTCGCCGGCCGCT
GCGGCGATGACGCGCTGTCCATCGCGGAGACCGCGCTGCTGCTGCTGCGC
TGCGGCGCTGTGAGCTCCGCCTCGTGGCGCGCGGACGACGGCGCCTGTGT
CTTTGGCACTCGCTCCGCGCCAACGCAGACGCAGTGGGACTGGGGGGACG
CGGTAGCGTTCGCAGGCGGAAGGGACGGCGTGCTGGTGCTCGATGGGCAG
GGCAGCGGAGGCAGCAGCGGCGGCGGCGACGGCAATGGCGGCAAGTTGAT
GGCAGGATAA
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