mRNA_15801 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|353594 vs. uniprot
Match: A0A835Z6T6_9STRA (Wheel domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6T6_9STRA) HSP 1 Score: 875 bits (2262), Expect = 0.000e+0 Identity = 537/537 (100.00%), Postives = 537/537 (100.00%), Query Frame = 1
Query: 1 MSPTYRTVALALHWMEAQRRTVALRRGSASDTRDRSAQRDATSAPPGPPRLHRVRWRDAPRLRVSCATHGGAHTGTARESRKARTGVTMRGIGAPPHEGNERFKRTRLNKMYFKHAALFYTEAIKHAVMAEQTADMVRLRATVLANRAAANLGIKNYGXXXXXXXXXXXXSVRRHCDESLRLQPGNSXXXXXXNVNVXXXXXXXXXXXXXXVKCYFRKAKALEGLKQYDEAVDCCVEGLEIDPASKELTELRTRCAAEARDAAERAAAAXXXVRAXCXXXXXXFRAAAARGVALGPSAFDASHAHFGSDLAPTPDPDSDSSELLWPLLLLYPANGQSDVVRSVAERDTVGAHLAVVFPEGGPPPPWDAAAYEYRCSRLEAYARLGAARAFRDEADCADEVKASCGASLTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPRVRALRGLDTPEAAEKARAEVKQRARSADFDPNKARWLHVHPKCTVSQLLTHPEHVAAGGMVTLHVYARGSEAHAQFLRYNAPRIRELEP 1611
MSPTYRTVALALHWMEAQRRTVALRRGSASDTRDRSAQRDATSAPPGPPRLHRVRWRDAPRLRVSCATHGGAHTGTARESRKARTGVTMRGIGAPPHEGNERFKRTRLNKMYFKHAALFYTEAIKHAVMAEQTADMVRLRATVLANRAAANLGIKNYGXXXXXXXXXXXXSVRRHCDESLRLQPGNSXXXXXXNVNVXXXXXXXXXXXXXXVKCYFRKAKALEGLKQYDEAVDCCVEGLEIDPASKELTELRTRCAAEARDAAERAAAAXXXVRAXCXXXXXXFRAAAARGVALGPSAFDASHAHFGSDLAPTPDPDSDSSELLWPLLLLYPANGQSDVVRSVAERDTVGAHLAVVFPEGGPPPPWDAAAYEYRCSRLEAYARLGAARAFRDEADCADEVKASCGASLTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPRVRALRGLDTPEAAEKARAEVKQRARSADFDPNKARWLHVHPKCTVSQLLTHPEHVAAGGMVTLHVYARGSEAHAQFLRYNAPRIRELEP
Sbjct: 1 MSPTYRTVALALHWMEAQRRTVALRRGSASDTRDRSAQRDATSAPPGPPRLHRVRWRDAPRLRVSCATHGGAHTGTARESRKARTGVTMRGIGAPPHEGNERFKRTRLNKMYFKHAALFYTEAIKHAVMAEQTADMVRLRATVLANRAAANLGIKNYGXXXXXXXXXXXXSVRRHCDESLRLQPGNSXXXXXXNVNVXXXXXXXXXXXXXXVKCYFRKAKALEGLKQYDEAVDCCVEGLEIDPASKELTELRTRCAAEARDAAERAAAAXXXVRAXCXXXXXXFRAAAARGVALGPSAFDASHAHFGSDLAPTPDPDSDSSELLWPLLLLYPANGQSDVVRSVAERDTVGAHLAVVFPEGGPPPPWDAAAYEYRCSRLEAYARLGAARAFRDEADCADEVKASCGASLTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPRVRALRGLDTPEAAEKARAEVKQRARSADFDPNKARWLHVHPKCTVSQLLTHPEHVAAGGMVTLHVYARGSEAHAQFLRYNAPRIRELEP 537
BLAST of jgi.p|Trimin1|353594 vs. uniprot
Match: D7FKE3_ECTSI (Wheel domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKE3_ECTSI) HSP 1 Score: 161 bits (407), Expect = 3.020e-40 Identity = 123/440 (27.95%), Postives = 178/440 (40.45%), Query Frame = 1
Query: 295 GNERFKRTRLNKMYFKHAALFYTEAIKHAVMAEQTADMVRLRATVLANRAAANLGIKNYGXXXXXXXXXXXXSVRRHCDESLRLQPGNSXXXXXXNVNVXXXXXXXXXXXXXXVKCYFRKAKALEGLKQYDEAVDCCVEGLEIDPASKELTELRTRCAAEARDAAERAAAAXXXVRAXCXXXXXXFRAAAARGVALGPSAFDAS-HAHFGSDLAPTPDPDSDSSELLWPLLLLYPANGQSDVVRSVAERDTVGAHLAVVFPEGGPPPPWDAAAYEYRCSRLEAYARLGAARAFRDEADCADEVKASCGASLTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPRVRALRGLDTPEAAEKARAEVKQRARSADFDPNKARWLHVHPKCTVSQLLTHPEHVAAGGMVTLHVYARGSEAHAQFLRYNAPRIRELEP 1611
GN+RFKR + N MYF+HA YTE +++ + E+T ++ + +L+NRA ANL +KNYG S R+ CDE+L L PG+ VKC +RK L +++ C + A + AA + A GV LGPS FD S H + L D D ++WP+LLLYP GQSD++++ + D + HLA FPE GPP PWD + +EYRCS L Y L D E + A ++ A E +R ++ A +A RW VHP CT+ ++L+ +HV AG TL ++ + ++H FLR + RI L+P
Sbjct: 88 GNDRFKRGKKNAMYFRHAQQAYTEGLRNVRLGEETPELTAMVVALLSNRAMANLALKNYG------------SCRKDCDEALALSPGH-------------------------VKCLYRKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLKIKKECGRALKAAEDATAALNREKEERLERLAAVWDECEAAGVKLGPSGFDESNHEQRNAFLPMADDEHGDKGGVIWPVLLLYPQYGQSDLIQAFRDADMLAEHLAAAFPEEGPPAPWDTS-FEYRCSELVIYLPLRPVEPSPSVFDWVAEFEKMEAAKVSG-------------------------------------------------AEEMSRRSKERAAATAAAAARPQRWARVHPGCTLLRILSFEDHVVAGATPTLLLFPKDGQSHKDFLRDSGGRIFTLDP 440
BLAST of jgi.p|Trimin1|353594 vs. uniprot
Match: A0A507C9A7_9FUNG (Wheel domain-containing protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507C9A7_9FUNG) HSP 1 Score: 94.0 bits (232), Expect = 3.410e-17 Identity = 86/289 (29.76%), Postives = 124/289 (42.91%), Query Frame = 1
Query: 289 HEGNERFKRTRLNKMYFKHAALFYTEAIKHAVMAEQTADMVRLRATVLANRAAANLGIKNYGXXXXXXXXXXXXSVRRHCDESLRLQPGNSXXXXXXNVNVXXXXXXXXXXXXXXVKCYFRKAKALEGLKQYDEAVDCCVEGLEIDPAS----KELTELRTRCAAEARDAAERAAAAXXXVRAXCXXXXXXFRAAAARGVALGPSAFDASHAHFGSDLAPTPDPDSDSSELLWPLLLLYPANGQSDVVRSVAERDTVGAHLAVVFPEGGPPPPWDAAAYEYRCSRLEAY 1143
++GNE FK R +K A +FY+ + H D + L T+L NRAAA++ + NY V C +L+L P N VK ++R A+A L++++EAVDCC GLEIDP + +EL + T+ EA E A ++A +A R + G A+ H D ++ L P+L LYP QSD + + E DT G H+ VF + PPPWDA EY +L+ Y
Sbjct: 74 NQGNEAFKERR-----YKDARVFYSRGLDHKC------DDIDLNTTLLVNRAAAHIELGNY------------RQVLLDCAAALKLSPKN-------------------------VKAFYRSARACTALERFEEAVDCCERGLEIDPTNDALKRELEVIETK-RGEAVKHQEAKRAQQLEIQAQDQALSDALKARNIRSIETGSGIHPAAEDHHILL-------DPATNTLSIPVLFLYPEYSQSDFIAAFNENDTFGEHIHTVFDD---PPPWDAKK-EYLPDKLDVY 302
BLAST of jgi.p|Trimin1|353594 vs. uniprot
Match: A0A1V9YFH9_9STRA (Wheel domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YFH9_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 8.830e-16 Identity = 98/320 (30.63%), Postives = 136/320 (42.50%), Query Frame = 1
Query: 289 HEGNERFKR-TRLNKMYFKHAALFYTEAIKHAVMA---------------EQTADMVRLRATVLANRAAANLGIKNYGXXXXXXXXXXXXSVRRHCDESLRLQPGNSXXXXXXNVNVXXXXXXXXXXXXXXVKCYFRKAKALEGLKQYDEAVDCCVEGLEIDPASKELTELRT---RCAAEAR-----DA--AERAAAAXXXVRAXCXXXXXXFRAAAARGVALGPSAFDASHAHFGSDLAPTPDPDSDSSELLWPLLLLYPANGQSDVVRSVAERDTVGAHLAVVFPEGGPPPPWDAAAYEYRCSRLEAYARLGAARAF 1170
++GN+ F + NK Y+ +A Y++A+ + + A ++ M L AT+L NRAAA+L +KNYG S R +L+ P N +K +R AKA LK+ ++ + C GL IDP +KEL LR R E R DA A++A A R C A RGV +G D + D D D + + WP+LLLY GQSD ++S ERD HLA +FPE GP WD ++Y S+L YA AF
Sbjct: 64 NKGNKMFADGKKFNKNYYSYALKEYSDALAYGLKALASPTPAEELAKMDIDEPIVMTTLMATILTNRAAAHLALKNYG------------SCRSDAARALKYDPKN-------------------------LKAIYRGAKASSLLKKPEDTLRYCAVGLAIDPNNKELLALRVDGDRILEEQRVQRELDAFKAKKAHAMTDKFRKLC----------ALRGVRVGRGVLDDARV---KDFEGKADLDEEGV-MCWPVLLLYDEYGQSDFIQSFGERDMFIEHLANMFPEEGPFCFWDQR-HDYVASQLVVYAAADVVPAF 331
BLAST of jgi.p|Trimin1|353594 vs. uniprot
Match: A0A024GLS2_9STRA (Wheel domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GLS2_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 4.960e-14 Identity = 85/317 (26.81%), Postives = 142/317 (44.79%), Query Frame = 1
Query: 292 EGNERFKRTRLNKM-YFKHAALFYTEAIKHAVMA-----EQTA---DMVRLRATVLANRAAANLGIKNYGXXXXXXXXXXXXSVRRHCDESLRLQPGNSXXXXXXNVNVXXXXXXXXXXXXXXVKCYFRKAKALEGLKQYDEAVDCCVEGLEIDPASKELTEL---------RTRCAAEARDAA-ERAAAAXXXVRAXCXXXXXXFRAAAARGVALGPSAFDASHAHFGSDLAPTPDPDSDSSELLWPLLLLYPANGQSDVVRSVAERDTVGAHLAVVFPEGGPPPPWDAAAYEYRCSRLEAYARLGAARAFRDEAD 1185
+GNE F+ + + + Y++ A +Y++AI + + A EQ A ++ L A + +NR+A +L +KNYG C + G +K YFR AKA + L++ + + C+EGL+IDP+SK+L +L + + + +D ++ + R+ C AR + +G S F+ +LAP ++++++++WP+L LY SD+V + E DT HLA +FPEGGP WD Y+ S L Y R + F E D
Sbjct: 64 KGNEMFQTAKKHNLNYYRDALQYYSKAIAYGLEALKSTPEQRAPSYNITALMAQIYSNRSAVHLALKNYGS----------------CRSDAAVAIGYDCKH---------------------IKSYFRGAKASQKLQKPHDTLRYCMEGLQIDPSSKQLQQLEKEARLLLQKIQSEMDQKDREHQQRRSQVARYRSWCV----------ARRIRVGRSLFEDQRVRQ-YELAP--HVENETNDMVWPVLFLYDEYQTSDLVEAFGEHDTFVEHLANMFPEGGPYCEWDIEE-SYQASNLLLYVRANESIPFHTEED 329
BLAST of jgi.p|Trimin1|353594 vs. uniprot
Match: A0A1W0A4K1_9STRA (Wheel domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A4K1_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 2.160e-13 Identity = 91/320 (28.44%), Postives = 133/320 (41.56%), Query Frame = 1
Query: 289 HEGNERFKRTRLNKMYFKHAALFYTEAIKHA-----------VMAEQTAD----MVRLRATVLANRAAANLGIKNYGXXXXXXXXXXXXSVRRHCDESLRLQPGNSXXXXXXNVNVXXXXXXXXXXXXXXVKCYFRKAKALEGLKQYDEAVDCCVEGLEIDPASKELTELRT---RCAAEARDA-------AERAAAAXXXVRAXCXXXXXXFRAAAARGVALGPSAFDASHAHFGSDLAPTPDPDSDSSELLWPLLLLYPANGQSDVVRSVAERDTVGAHLAVVFPEGGPPPPWDAAAYEYRCSRLEAYARLGAARAFR 1173
++GN+ F + NK Y+ +A YT+A + V+A+ D M +L AT+L+NRAAA+L +KNYG S R +L+ P N +K +R AKA LK+ ++ + C GL IDP +KEL LR R E R A++ A R C R + +G + D + D D D + + WP+L LY GQSD ++ +E+D HLA +FPE GP WD +Y S+L+ Y AF+
Sbjct: 64 NKGNKMFSDGKKNKNYYGYAIKEYTDAFTYGLKALAEPTDPDVLAKMDLDEPIVMDKLMATILSNRAAAHLSLKNYG------------SCRSDAARALKYDPKN-------------------------IKAIYRGAKASSLLKKPEDTLRYCSVGLTIDPTNKELLALRKDGDRILEEQRVQRELDEFKAKKKYAMTEKYRKLCTM----------RNIRVGRAVIDDARV---KDFEGKADLDEEGV-MGWPVLFLYDEYGQSDFIQCFSEQDMFIEHLANMFPEDGPFCFWDKR-QDYVASKLQIYVAADVVPAFK 331
BLAST of jgi.p|Trimin1|353594 vs. uniprot
Match: A0A168KTU1_ABSGL (Wheel domain-containing protein n=1 Tax=Absidia glauca TaxID=4829 RepID=A0A168KTU1_ABSGL) HSP 1 Score: 77.4 bits (189), Expect = 1.180e-11 Identity = 75/274 (27.37%), Postives = 112/274 (40.88%), Query Frame = 1
Query: 289 HEGNERFKRTRLNKMYFKHAALFYTEAIKHAVMAEQTADMVRLRATVLANRAAANLGIKNYGXXXXXXXXXXXXSVRRHCDESLRLQPGNSXXXXXXNVNVXXXXXXXXXXXXXXVKCYFRKAKALEGLKQYDEAVDCCVEGLEIDPASKELTELRTRCAAEARDAAERAAAAXXXVRAXCXXXXXXFRAAAARGVALG---PSAFDASHAHFGSDLAPTPDPDSDSSELLWPLLLLYPANGQSDVVRSVAERDTVGAHLAVVFPEGGPPPPWD 1101
++GN+ FK K+ ++ A FYT AI +D + A ANRAA NL + NYG V R C + L L P N VK +R A+ L L + DEA DCCV L +DP + + +L+ + D +RAAA ++ A R + + + +DA+ + D+DS + WP+ LYP + +SD ++ E +T HL V+ P PWD
Sbjct: 84 NQGNDCFKA---GKLKYQDAVSFYTRAID-----TDCSDQALMEACY-ANRAAVNLELGNYG------------KVLRDCAKCLELNPSN-------------------------VKALYRSARGLFQLDRPDEAYDCCVHCLAVDPDNIPVQQLQAKIKKRQDDLKQRAAAKAERLQKEQQAKQQKSDALERRRITINVQDKAMYDAAAIQY----------DADSDTVTWPVFFLYPEHKESDYIQQFDENNTFQDHLDVMLEN---PAPWD 298
BLAST of jgi.p|Trimin1|353594 vs. uniprot
Match: A0A0F4ZEU7_9PEZI (Wheel domain-containing protein n=1 Tax=Thielaviopsis punctulata TaxID=72032 RepID=A0A0F4ZEU7_9PEZI) HSP 1 Score: 75.5 bits (184), Expect = 6.250e-11 Identity = 70/248 (28.23%), Postives = 103/248 (41.53%), Query Frame = 1
Query: 400 ADMVRLRATVLANRAAANLGIKNYGXXXXXXXXXXXXSVRRHCDESLRLQPGNSXXXXXXNVNVXXXXXXXXXXXXXXVKCYFRKAKALEGLKQYDEAVDCCVEGLEIDPASKELTELRTRCAAEARDAAERAAAAXXXVRAXCXXXXXXFRAAAARGVALGPSAFDASHAHFGSDLAPTPDPDSDSSELLWPLLLLYPANGQSDVVRSVAERDTVGAHLAVVFPEGGPPPPWDAAAYEYRCSRLEAY 1143
AD + ++ ANRAA NL ++N+ + C +LRL P N VKC++R AKAL + + D+A D GL +DPA+ L + A AE+ XX A AARG+ + G+ + PD D +S L++P LLLYP + +SD ++ +E D + AHL +FP PWD Y + +E Y
Sbjct: 142 ADQRAMLESLYANRAACNLELRNF------------RACWTDCTGALRLNPRN-------------------------VKCWYRSAKALLAVDRLDDAADAAARGLAVDPANAALQSTQAAVVARRAAIAEKERREQXXXDTQTRRRELVRTALAARGIRT--RVTEKPPPMEGAAVRLLPDEDDPTSSLVFPTLLLYPTDYESDFIKEWSELDALDAHLGYIFPL-----PWDKDG-NYTLANVECY 344
BLAST of jgi.p|Trimin1|353594 vs. uniprot
Match: A0A7S2AVY6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AVY6_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 8.540e-11 Identity = 29/63 (46.03%), Postives = 42/63 (66.67%), Query Frame = 1
Query: 1423 ADFDPNKARWLHVHPKCTVSQLLTHPEHVAAGGMVTLHVYARGSEAHAQFLRYNAPRIRELEP 1611
AD P+ W+ +HP CT+ L+ +PEHV AGG++TLH+Y + SEAH F++ I+EL P
Sbjct: 59 ADQHPDDQTWVKIHPACTMGDLIKYPEHVLAGGVLTLHMYPKNSEAHRNFVKACKAGIKELMP 121
BLAST of jgi.p|Trimin1|353594 vs. uniprot
Match: W9YKM2_9EURO (Wheel domain-containing protein n=1 Tax=Capronia coronata CBS 617.96 TaxID=1182541 RepID=W9YKM2_9EURO) HSP 1 Score: 74.3 bits (181), Expect = 1.440e-10 Identity = 72/250 (28.80%), Postives = 106/250 (42.40%), Query Frame = 1
Query: 409 VRLRATVLANRAAANLGIKNYGXXXXXXXXXXXXSVRRHCDESLRLQPGNSXXXXXXNVNVXXXXXXXXXXXXXXVKCYFRKAKALEGLKQYDEAVDCCVEGLEIDPAS----KELTELRTRCAA-EARDAAERAAAAXXXVRAXCXXXXXXFRAAAARGVALGPSAFDASHAHFGSDLAPTPDPDSDSSELLWPLLLLYPANGQSDVVRSVAERDTVGAHLAVVFPEGGPPPPWDAAAYEYRCSRLEAY 1143
+ L + NRA NL +KNY S C +LR+ P N VK ++R A AL L + EA+D G++IDP + K L ++RTR A E +D +A R G P+ DA + +PDP S +S+L +P++LLYP + QSD++++ AE+DT+ HL+ + P PWD EYR +E Y
Sbjct: 145 IALEEQLYTNRALCNLELKNY------------RSTTLDCAAALRINPTN-------------------------VKAHYRSAAALLALDKVLEALDVASRGIKIDPENGALKKLLDQIRTRAKAKEEQDRRRQAELRRRQQEKATLDAALRARKIQLHGSKHSPNLEDAV-------IRLSPDPLSPTSQLEFPVMLLYPMHNQSDLIKAWAEKDTINQHLSYILPL-----PWDGK-NEYRMDTVECY 344 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353594 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_15801 ID=mRNA_15801|Name=jgi.p|Trimin1|353594|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1647bp|location=Sequence derived from alignment at Contig_172:109130..112627+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGTCGCCTACATACCGCACAGTCGCGCTCGCGCTGCACTGGATGGAAGCback to top protein sequence of jgi.p|Trimin1|353594 >Trimin1|353594|estExt_Genemark1.C_Ctg_1720017 ID=Trimin1|353594|estExt_Genemark1.C_Ctg_1720017|Name=jgi.p|Trimin1|353594|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=538bp MSPTYRTVALALHWMEAQRRTVALRRGSASDTRDRSAQRDATSAPPGPPRback to top mRNA from alignment at Contig_172:109130..112627+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_15801 ID=mRNA_15801|Name=jgi.p|Trimin1|353594|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3498bp|location=Sequence derived from alignment at Contig_172:109130..112627+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_172:109130..112627+ >mRNA_15801 ID=mRNA_15801|Name=jgi.p|Trimin1|353594|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1614bp|location=Sequence derived from alignment at Contig_172:109130..112627+ (Tribonema minus UTEX_B_3156 )back to top |