mRNA_15624 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|352994 vs. uniprot
Match: A0A836CL97_9STRA (Acyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL97_9STRA) HSP 1 Score: 1043 bits (2696), Expect = 0.000e+0 Identity = 495/495 (100.00%), Postives = 495/495 (100.00%), Query Frame = 1
Query: 1 MAAVDLDGVGSLEGSQGDDGALRLTGGLPYEYKSSLLEKVKGALLALLYGIGGWVGKTLTGAIAFIIVYPYVVRVREWPAFRRAIPGWGQHYHRQVAYHMEAPHEVLAGSNEGLTPGTLMCYHPHGVLSWSFILNGGFRKEFEPGLGLVVDGLYHAPFFRWFIADWTKTVQAANKPNFQRLMKSKALLGLIPGGLEEATISCKGKDRVYLKARKGFIKYALEFGYTIVPVYCFGECDTYHNLQGLWRLRLWLNSLKMPGVCFWGTWWCPLLPIPSNINTVFGKPFRVPQIDHPTPEDINKWHALYVQELKALYDRHKHQFASNPNQELEVCGYDAAFTPFDVNVALVHRRDVHCGTRAMRGGLQCCLIAVGSVAGAQEAAKYQQQRQEECGPDGGTLVITCGSSGGTPVHDSSNPPTDLHIRNPRTFLFSAWHVALIIKTEVIANIKFWLHATAADREVQQSSWHLKAAPHAERIDVRAALEVVPRLRARYATIS 1485
MAAVDLDGVGSLEGSQGDDGALRLTGGLPYEYKSSLLEKVKGALLALLYGIGGWVGKTLTGAIAFIIVYPYVVRVREWPAFRRAIPGWGQHYHRQVAYHMEAPHEVLAGSNEGLTPGTLMCYHPHGVLSWSFILNGGFRKEFEPGLGLVVDGLYHAPFFRWFIADWTKTVQAANKPNFQRLMKSKALLGLIPGGLEEATISCKGKDRVYLKARKGFIKYALEFGYTIVPVYCFGECDTYHNLQGLWRLRLWLNSLKMPGVCFWGTWWCPLLPIPSNINTVFGKPFRVPQIDHPTPEDINKWHALYVQELKALYDRHKHQFASNPNQELEVCGYDAAFTPFDVNVALVHRRDVHCGTRAMRGGLQCCLIAVGSVAGAQEAAKYQQQRQEECGPDGGTLVITCGSSGGTPVHDSSNPPTDLHIRNPRTFLFSAWHVALIIKTEVIANIKFWLHATAADREVQQSSWHLKAAPHAERIDVRAALEVVPRLRARYATIS
Sbjct: 1 MAAVDLDGVGSLEGSQGDDGALRLTGGLPYEYKSSLLEKVKGALLALLYGIGGWVGKTLTGAIAFIIVYPYVVRVREWPAFRRAIPGWGQHYHRQVAYHMEAPHEVLAGSNEGLTPGTLMCYHPHGVLSWSFILNGGFRKEFEPGLGLVVDGLYHAPFFRWFIADWTKTVQAANKPNFQRLMKSKALLGLIPGGLEEATISCKGKDRVYLKARKGFIKYALEFGYTIVPVYCFGECDTYHNLQGLWRLRLWLNSLKMPGVCFWGTWWCPLLPIPSNINTVFGKPFRVPQIDHPTPEDINKWHALYVQELKALYDRHKHQFASNPNQELEVCGYDAAFTPFDVNVALVHRRDVHCGTRAMRGGLQCCLIAVGSVAGAQEAAKYQQQRQEECGPDGGTLVITCGSSGGTPVHDSSNPPTDLHIRNPRTFLFSAWHVALIIKTEVIANIKFWLHATAADREVQQSSWHLKAAPHAERIDVRAALEVVPRLRARYATIS 495
BLAST of jgi.p|Trimin1|352994 vs. uniprot
Match: A0A7S4D9T5_HETAK (Acyltransferase n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D9T5_HETAK) HSP 1 Score: 297 bits (760), Expect = 9.600e-94 Identity = 138/297 (46.46%), Postives = 193/297 (64.98%), Query Frame = 1
Query: 118 VKGALLALLYGIGGWVGKTLT----GAIAFIIVYPYVVRVREWPAFRRAIPGWGQHYHRQ--VAYHMEAPHEVLAGSNEGLTPGTLMCYHPHGVLSWSFILNGGFRKEFEPGLGLVVDGLYHAPFFRWFIADWTKTVQAANKPNFQRLMKSKALLGLIPGGLEEATISCKGKDRVYLKARKGFIKYALEFGYTIVPVYCFGECDTYHNLQGLWRLRLWLNSLKMPGVCFWGTWWCPLLPIPSNINTVFGKPFRVPQIDHPTPEDINKWHALYVQELKALYDRHKHQFASNPNQELEV 990
V G L++G+ W G ++ I F+ ++P++++ +WPAF+ IP WGQ YH++ + + AP + + CYHPHGVLSW F+LN GFR FEP G+V D L +AP + WF+ WTK V+ A+K + R M+ G+IPGG EEATIS G RVYLK RKGF+KYAL++GY +VPVY FGE DTY+N+QG WRLRLWLNSL++PGV +G WWCP++P + TV GKP ++PQI P+ D+NKWH YV+ L +++++K Q P+ E+E+
Sbjct: 47 VGGVNTPLIFGLLIWRGTLVSYVFAAVILFVAIFPFIIKPGKWPAFKYTIPEWGQRYHKECNIIFVEGAPFDEDLHKLQRHA----FCYHPHGVLSWGFVLNAGFRHFFEPLFGVVADALCYAPLWYWFVTRWTKAVRPASKKHMTRYMEKGESFGIIPGGFEEATISKLGAQRVYLKKRKGFVKYALKYGYALVPVYTFGESDTYYNVQGAWRLRLWLNSLQLPGVLPFGAWWCPIMPKQVRLTTVVGKPLQLPQISSPSQTDVNKWHEEYVKALLEVFEQNKSQ-CGYPDAEMEL 338
BLAST of jgi.p|Trimin1|352994 vs. uniprot
Match: D8LL52_ECTSI (Acyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL52_ECTSI) HSP 1 Score: 280 bits (716), Expect = 1.310e-86 Identity = 149/332 (44.88%), Postives = 200/332 (60.24%), Query Frame = 1
Query: 37 EGSQGDDGALRLTGGLPYEYKSSLLEKVKGALLALLYGIGGWVGK----TLTGAIAFIIVYPYVVR---VRE-----WPAFRRAIPGWGQHYHRQVA--YHMEAPHEVLAGSNEGLTPGTLMCYHPHGVLSWSFILNGGFRKEFEPGLGLVVDGLYHAPFFRWFIADWTKTVQAANKPNFQRLMKSKALLGLIPGGLEEATISCKGKDRVYLKARKGFIKYALEFGYTIVPVYCFGECDTYHNLQGLWRLRLWLNSLKMPGVCFWGTWWCPLLPIPSNINTVFGKPFRVPQIDHPTPEDINKWHALYVQELKALYDRHKHQFASNPNQELEV 990
EGS G LRL GGL + ++ V GAL L+ WVG T+ + V+PYV + +E W FR AIP W Q++H+ Y E P S + + P T+ CYHPHGV + +I+NG +E LGL+ LYHAP FR W + ++K F MK G+IPGG +EAT+S G+DRV++K RKG +KYAL+ GY + P + FGE DTY N QG+W+LRLW+ + +PGVC WGTWWCPLLP + TVFG+P +P+I+ P+PED++KWHA YV+ELKAL+ RHK ++ASNP EL+V
Sbjct: 57 EGSAG--ALLRLRGGLTLLFV--VVVWVIGALAPLVACALIWVGSRTAYTVLAGLVAAGVFPYVAKGSGSKENGDVGWTEFRHAIPRWSQYWHKSCGRVYEKEGPE-----SWDNMPP-TVFCYHPHGVFTQGYIINGSMNQELPKILGLLATALYHAPLFRLVFGRWAGSCAPSSKEVFLDQMKKGLSFGIIPGGFQEATLSKLGEDRVWMKNRKGLVKYALQSGYRLRPCFTFGESDTYWNAQGMWKLRLWMAAKNLPGVCPWGTWWCPLLPRRVKLMTVFGEPLALPKIEQPSPEDVDKWHAAYVEELKALHGRHKAKYASNPQLELKV 378
BLAST of jgi.p|Trimin1|352994 vs. uniprot
Match: A0A7S2CE87_9STRA (Acyltransferase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CE87_9STRA) HSP 1 Score: 212 bits (539), Expect = 6.490e-61 Identity = 120/277 (43.32%), Postives = 160/277 (57.76%), Query Frame = 1
Query: 133 LALLYGIGGWVGKTLTGAIAFIIVYPYVVRVREWPAFRRAIPGWGQH-YHRQVAYHMEAPHEVLAGSNEGLTPGTLMCYHPHGVLSWSFILNGGFRKEFE--PGLGLVVDGLYHAPFFRWFIADWTKTVQAANKPNFQRLMKSKALLGLIPGGLEEATISCKGKDRVYLKARKGFIKYALEFGYTIVPVYCFGECDTYHNLQGLWRLRLWLNSLKMPGVCFWGTWWCPLLPIPS-NINTVFGKPFRVPQIDHPTPEDINKWHALYVQELKALYDRHK 951
L LLY G +V T AI ++ YV + WP FR+ I Y+ H+ PH V NE +++CYHPHG L F NG E + P LVVD L HAP F + W V A+ N +RLMK + +G+IPGG E+ATI KG +R++LK RKGFIKYAL FGY + PVY FGECDT++ L +LR+ LN+ K+P V F+G + PL P + N++T GK +P+ID PT ED++KWH Y L+ L+D+HK
Sbjct: 54 LYLLYA-GSYVAGT---AILGLVSLQYVTTPKYWPEFRQLIKDMDPRCYYDHCELHL--PHGVEDIKNEK----SMLCYHPHGALCVGFSWNGAHAPELKHIPAKWLVVDVLMHAPLFGRILR-WIGNVGGADAGNMKRLMKEGSNIGIIPGGFEDATIMKKGSERIWLKKRKGFIKYALRFGYRVHPVYNFGECDTFYTFHWLAKLRMKLNAFKIPAVFFFGNVFMPLFPRTNINMHTFIGKAIELPKIDEPTKEDVDKWHKTYCDALQVLFDKHK 319
BLAST of jgi.p|Trimin1|352994 vs. uniprot
Match: A0A6B2LGP4_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LGP4_9EUKA) HSP 1 Score: 190 bits (482), Expect = 7.250e-54 Identity = 92/215 (42.79%), Postives = 130/215 (60.47%), Query Frame = 1
Query: 352 TLMCYHPHGV--LSWSFILNGGFRKEFEPGLGLVVDGLYHAPFFRWFIADWTKTVQAANKPNFQRLMKSKALLGLIPGGLEEATISCKGKDRVYLKARKGFIKYALEFGYTIVPVYCFGECDTYHNLQGLWRLRLWLNSLKMPGVCFWGTWWCPLLPIPSNINTVFGKPFRVPQIDHPTPEDINKWHALYVQELKALYDRHKHQFASNPNQELEV 990
TL+C HPHG+ L W + R+E + LY +PFFR ++ +K LMK KA L LIPGG EEA++ KG D +YLK RKGF+KYAL++GY++ PVY FGE DT+ NL G W+ RL+LN +P V G WWCP+LP PSN++ V G+ +P I P+P D++++H LY+Q L LY++H + + L++
Sbjct: 16 TLLCVHPHGIFCLGWGIMFA---REETKDVHFCFSSALYQSPFFR-VLSMLIGKPSPVDKDTISNLMKKKANLALIPGGFEEASLFVKGTDVIYLKHRKGFVKYALQYGYSLTPVYVFGERDTFWNLPGFWKFRLFLNRFGIPAVVPVGQWWCPILPRPSNLHIVVGEALPLPHIPSPSPSDVDQYHHLYIQSLTRLYNKHFPTYHPSQTPNLQI 226
BLAST of jgi.p|Trimin1|352994 vs. uniprot
Match: A0A7S2CDP3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CDP3_9STRA) HSP 1 Score: 186 bits (473), Expect = 3.310e-53 Identity = 83/165 (50.30%), Postives = 118/165 (71.52%), Query Frame = 1
Query: 457 LYHAPFFRWFIADWTKTVQAANKPNFQRLMKSKALLGLIPGGLEEATISCKGKDRVYLKARKGFIKYALEFGYTIVPVYCFGECDTYHNLQGLWRLRLWLNSLKMPGVCFWGTWWCPLLPIPSNINTVFGKPFRVPQIDHPTPEDINKWHALYVQELKALYDRHK 951
LY++PFFR + T Q A+K F +LM+ + + +IPGG EEAT++ + K R+YLK RKGF+KYAL+ GYT+VP YCFGE TY NLQG W+ R+WLN L +P + +G WW PLLP S+++ V GK ++P + P+ E+++KWH +YV+E+ AL+DRHK
Sbjct: 2 LYNSPFFR-LLTKCTGNPQPADKNTFLKLMQEEKPMAVIPGGFEEATVTSEIKHRLYLKKRKGFVKYALQNGYTLVPSYCFGESRTYSNLQGFWKFRMWLNGLGLPAIVPFGRWWFPLLPRNSDMHIVVGKGLQLPTLATPSKEEVDKWHGMYVEEVTALFDRHK 165
BLAST of jgi.p|Trimin1|352994 vs. uniprot
Match: A0A290GKF5_9STRA (Acyltransferase n=1 Tax=Nannochloropsis oceanica strain IMET1 TaxID=1333499 RepID=A0A290GKF5_9STRA) HSP 1 Score: 192 bits (489), Expect = 6.750e-53 Identity = 111/286 (38.81%), Postives = 153/286 (53.50%), Query Frame = 1
Query: 187 IAFIIVYPYVVRVREWPAFRRAIPGWGQHYHRQVAYHMEAPHEVLAGSNEGLTPGTLMCYHPHGVLSWSFILNGG----------------FRKEFEPGLGLVVDGLYHAPFFRWFIADWTKTVQAANKPNFQRLMKSKALLGLIPGGLEEATISCKGKDRVYLKARKGFIKYALEFGYTIVPVYCFGECDTYHNLQGLWRLRLW-LNSLKMPGVCFWGTWWCPLLPIPS-NINTVFGKPFRVPQIDHPTPEDINKWHALYVQELKALYDRHKHQFASNPNQELEV 990
+A I+ YPYVV+V++ PAF R I + ++E + + S L+C HPHG+ ++ FI NG FR V L+ P R FI + A K RLM +K LGL+PGG EE +S G +R Y+ RKGF+KYAL+ GYTI Y FGE D+Y L + R+W L + ++P WG WWCPLLP + TV G PFR+P+I P+ EDI+KWHA+YVQ+L L+DR+K +F ++ELE+
Sbjct: 112 MAVIMAYPYVVKVKQSPAFIRFILSGAGWFKGGTCLYLEESMKQIDTSES-----VLLCQHPHGLFTYGFIQNGSAARIDARKPEVYVPAAFRHMKPNAKAFVEPLLFKIPLIRHFITAFGNAAPATKK-EMHRLMSTKIPLGLLPGGSEEIILSHHGHERAYILKRKGFLKYALQHGYTICIGYTFGESDSYRTLDWGVKFRMWYLKTFRVPLFACWGIWWCPLLPRGQVALETVVGNPFRLPKISDPSQEDIDKWHAVYVQKLVDLFDRNKAKFGYG-DRELEL 390
BLAST of jgi.p|Trimin1|352994 vs. uniprot
Match: T0Q0M4_SAPDV (Acyltransferase n=2 Tax=Saprolegnia TaxID=4769 RepID=T0Q0M4_SAPDV) HSP 1 Score: 191 bits (484), Expect = 8.450e-53 Identity = 107/274 (39.05%), Postives = 155/274 (56.57%), Query Frame = 1
Query: 205 YPYVVRVREWPAFRRAIPGWGQHYHRQVAYHMEAPHEVLAGSNEGLTPG-----TLMCYHPHGVLSWSFILNGGFRKEFEPG--LGLVVDGLYHAP----FFRWFIADWTKTVQAANKPNFQRLMKSKALLGLIPGGLEEATISCKGKDRVYLKARKGFIKYALEFGYTIVPVYCFGECDTYHNLQGLWRLRLWLNSLKMPGVCFWGTWWCPLLPIPS-NINTVFGKPFRVPQIDHPTPEDINKWHALYVQELKALYDRHKHQFASNPNQELEV 990
Y Y+ + WP+ A+ Y R Y A +V+ +EG +P TLM YHPHG+L +++NGG F LV D L+ P WF A + NF+RL K+ + +IPGG EEATI +G RV+LK RKGF+K AL++GY + PVY FGE +T+ + + R+WLN K+PGV F G W+C +P S + TV G P ++P +DHPT +D+ K+H Y+ L+AL+D++K Q+A++PN LE+
Sbjct: 75 YRYLFPLAAWPSLSTALVDI---YQRHPYY---AKQDVVF--DEGASPAKDHSKTLMAYHPHGILCCGWLVNGGANPVFRHSNFSWLVTDLLFLVPGMSNLLAWFQGG------PAGRANFERLAKAGDNIAIIPGGFEEATIFARGHHRVFLKNRKGFLKLALQYGYKVHPVYTFGEEETFASCPYFLKARVWLNKYKVPGVIFRGLWFCFYMPFRSARLTTVVGAPLQLPTLDHPTVDDVTKYHNAYMAALQALFDKYKGQYATDPNAVLEL 334
BLAST of jgi.p|Trimin1|352994 vs. uniprot
Match: A0A1V9ZWB6_9STRA (Acyltransferase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZWB6_9STRA) HSP 1 Score: 189 bits (481), Expect = 1.100e-52 Identity = 110/274 (40.15%), Postives = 152/274 (55.47%), Query Frame = 1
Query: 193 FIIVYPY---VVRVREWPAFRRAIPGWGQHYHRQVAYHMEAPHEVLAGSNEGLTPG----TLMCYHPHGVLSWSFILNGGFRKEFEPGL--GLVVDGLYHAPFFRWFIADWTKTVQAANKPNFQRLMKSKALLGLIPGGLEEATISCKGKDRVYLKARKGFIKYALEFGYTIVPVYCFGECDTYHNLQGLWRLRLWLNSLKMPGVCFWGTWWCPLLPIPSN-INTVFGKPFRVPQIDHPTPEDINKWHALYVQELKALYDRHKHQFASNPNQEL 984
F I Y Y + +++WPA + Q +R + P + + ++ P L+ YHPHGVLS + NG + F LV D L++ P I+ W A K NF++L K + LIPGG EEAT G+ +VYLK RKGFIK AL++GY + PVY FGE Y + R RLWLNS K+PGV F+G WWC +LP +N + TV GKP +P I+HPT E + K H Y+++L+AL+D+HK Q+A +P L
Sbjct: 41 FAIYYSYRYFISPLKKWPAAQ-------QFGYRMFKKYQYFPVQKVVFEDDAAPPAPDSKALLAYHPHGVLSCGWTSNGIGSESFANSKVEWLVSDVLFNLPVMGDMIS-WAGC-GPAGKENFEKLCSKKHNIALIPGGYEEATHFKHGQHQVYLKKRKGFIKLALKYGYKVYPVYTFGEELAYTTINSFLRFRLWLNSWKIPGVVFYGKWWCSVLPYDNNPLVTVVGKPLELPLIEHPTWEQVEKHHDEYMKQLEALFDKHKAQYAKDPKATL 305
BLAST of jgi.p|Trimin1|352994 vs. uniprot
Match: A0A485KXR2_9STRA (Acyltransferase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KXR2_9STRA) HSP 1 Score: 190 bits (483), Expect = 1.280e-52 Identity = 94/216 (43.52%), Postives = 138/216 (63.89%), Query Frame = 1
Query: 352 TLMCYHPHGVLSWSFILNGGFRKEF-EPGLG-LVVDGLYHAPFFRWFIADWTKTVQAANKPNFQRLMKSKALLGLIPGGLEEATISCKGKDRVYLKARKGFIKYALEFGYTIVPVYCFGECDTYHNLQGLWRLRLWLNSLKMPGVCFWGTWWCPLLPIPS-NINTVFGKPFRVPQIDHPTPEDINKWHALYVQELKALYDRHKHQFASNPNQELEV 990
T+ +HPHGVL + +NG + + + L D L+ PF + W + AA KPNF+RLMK + L+PGG EEAT+ KG+ RVY+K R GFIKY L+ GYT+ PVY FGE +T++ + LRLWLN ++PGV +GTWWC +P+ S + TV GKP ++P+ID PT ED+ K+H +Y+ L+ ++DR+K ++A++P L +
Sbjct: 124 TMFAFHPHGVLCCGWSVNGAMNASWLDLKISWLAADVLFKLPFVS-HVLSWGGSDTAA-KPNFERLMKQGDNIALLPGGFEEATLFAKGEHRVYIKKRAGFIKYGLQCGYTVYPVYTFGEEETFYAVSWFLPLRLWLNRFQVPGVIPFGTWWCSYMPLRSAKLTTVVGKPIKLPRIDAPTREDVAKYHQVYMDALQGVFDRNKAKYATDPEATLHM 337 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352994 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_15624 ID=mRNA_15624|Name=jgi.p|Trimin1|352994|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1488bp|location=Sequence derived from alignment at Contig_140:21410..33225- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGCTGCGGTTGATCTGGATGGGGTCGGTTCTTTGGAGGGAAGTCAAGGback to top protein sequence of jgi.p|Trimin1|352994 >Trimin1|352994|estExt_Genemark1.C_Ctg_1400004 ID=Trimin1|352994|estExt_Genemark1.C_Ctg_1400004|Name=jgi.p|Trimin1|352994|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=496bp MAAVDLDGVGSLEGSQGDDGALRLTGGLPYEYKSSLLEKVKGALLALLYGback to top mRNA from alignment at Contig_140:21410..33225- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_15624 ID=mRNA_15624|Name=jgi.p|Trimin1|352994|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=11816bp|location=Sequence derived from alignment at Contig_140:21410..33225- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_140:21410..33225- >mRNA_15624 ID=mRNA_15624|Name=jgi.p|Trimin1|352994|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1488bp|location=Sequence derived from alignment at Contig_140:21410..33225- (Tribonema minus UTEX_B_3156 )back to top |