mRNA_15505 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|352209
Unique Name	mRNA_15505
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

[Close]

BLAST of jgi.p|Trimin1|352209 vs. uniprot
Match: A0A836CMB1_9STRA (TB2/DP1, HVA22 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMB1_9STRA)

HSP 1 Score: 308 bits (788), Expect = 1.290e-103
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 1

Query:  109 MEQVQDMLAKLRGFLDTAPGAPYLTKAEEATGVPKQLMVVGVLTLSSIAFAFVLGVASVCNLVGFVYPAYCSFKAIESTGSSQEDTQWLTYWVLYGCFSIVEVFQGLVNNLPFFYQFKFAFLLWCMLPSTRGASLLYASVLRDALRPLVKPKAT 570
            MEQVQDMLAKLRGFLDTAPGAPYLTKAEEATGVPKQLMVVGVLTLSSIAFAFVLGVASVCNLVGFVYPAYCSFKAIESTGSSQEDTQWLTYWVLYGCFSIVEVFQGLVNNLPFFYQFKFAFLLWCMLPSTRGASLLYASVLRDALRPLVKPKAT
Sbjct:    1 MEQVQDMLAKLRGFLDTAPGAPYLTKAEEATGVPKQLMVVGVLTLSSIAFAFVLGVASVCNLVGFVYPAYCSFKAIESTGSSQEDTQWLTYWVLYGCFSIVEVFQGLVNNLPFFYQFKFAFLLWCMLPSTRGASLLYASVLRDALRPLVKPKAT 154

[Close]

BLAST of jgi.p|Trimin1|352209 vs. uniprot
Match: K3WBL2_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WBL2_GLOUD)

HSP 1 Score: 134 bits (338), Expect = 5.760e-35
Identity = 73/147 (49.66%), Postives = 95/147 (64.63%), Query Frame = 1

Query:  109 MEQVQDMLAKLRGFLDTAPGAPYLTKAEEATGVPKQLMVVGVLTLSSIAFAFVLGVASVCNLVGFVYPAYCSFKAIESTGSSQEDTQWLTYWVLYGCFSIVEVFQG-LVNNLPFFYQFKFAFLLWCMLPSTRGASLLYASVLRDALR 546
            M++VQ  L K    LD  P    L KA++ATGV K  +V G  T+  +      G   +CNLVGF+YPA+CSFKAIES  S ++D QWLTYWV+Y CF+I+EVF   L+  +PF+Y FK  FLLW  +PST+GAS LY + L   L+
Sbjct:    1 MDKVQVYLDKWSKDLDKFP---LLQKAQDATGVEKLYLVAGASTVLLLLLLVGFGAGLICNLVGFIYPAFCSFKAIESE-SKKDDVQWLTYWVVYACFNIIEVFADFLLYWIPFYYAFKLGFLLWLFMPSTQGASFLYNTFLAPFLK 143

[Close]

BLAST of jgi.p|Trimin1|352209 vs. uniprot
Match: A0A7S0ASR9_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0ASR9_9STRA)

HSP 1 Score: 133 bits (334), Expect = 1.810e-34
Identity = 72/147 (48.98%), Postives = 96/147 (65.31%), Query Frame = 1

Query:  109 MEQVQDMLAKLRGFLDTAPGAPYLTKAEEATGVPKQLMVVGVLTLSSIAFAFVLGVASVCNLVGFVYPAYCSFKAIESTGSSQEDTQWLTYWVLYGCFSIVEVFQG-LVNNLPFFYQFKFAFLLWCMLPSTRGASLLYASVLRDALR 546
            M+Q++  L K+R  LD  P      KAE+ T VPK+ + +G   L      F +G  ++CN+VGFVYPA+ SF+AIE T +  +DTQWL YWV+Y  FSI+EVF   L+  +PF+Y FK AFL+WCM P TRGA  LY S L+D L+
Sbjct:    1 MDQIEAQLKKIRTKLDDVPA---FQKAEDVTKVPKEYIALGGGALVLFILFFGVGAGALCNIVGFVYPAFKSFEAIE-TQARGDDTQWLIYWVVYAFFSIIEVFVDFLLYWIPFYYPFKAAFLIWCMAPQTRGAKFLYDSFLKDFLK 143

[Close]

BLAST of jgi.p|Trimin1|352209 vs. uniprot
Match: B7FT25_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FT25_PHATC)

HSP 1 Score: 132 bits (332), Expect = 3.200e-34
Identity = 74/147 (50.34%), Postives = 99/147 (67.35%), Query Frame = 1

Query:  109 MEQVQDMLAKLRGFLDTAPGAPYLTKAEEATGVPKQLMVVGVLTLSSIAFAFVLGVASVCNLVGFVYPAYCSFKAIESTGSSQEDTQWLTYWVLYGCFSIVEVFQG-LVNNLPFFYQFKFAFLLWCMLPSTRGASLLYASVLRDALR 546
            M+ VQ+ L  LR  LD  P    L +AE  T VPK+ +V+G   L ++   F +G+AS+ +LVGFVYPA+ SF+AIE T S  +DTQWL YWV++  FSI+EVF   L+  +PF++ FK AFLLW MLP T+GA  LY S L+D L+
Sbjct:    1 MDIVQEKLQVLRTKLDKYP---VLQQAESTTSVPKEFLVLGGGLLFAVLTVFGIGIASLTSLVGFVYPAFKSFQAIE-TKSKGDDTQWLVYWVIFAFFSIIEVFVDVLLYWIPFYFAFKLAFLLWAMLPQTKGAKFLYESFLKDLLK 143

[Close]

BLAST of jgi.p|Trimin1|352209 vs. uniprot
Match: A0A7S1D0I5_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D0I5_CYCTE)

HSP 1 Score: 132 bits (333), Expect = 4.070e-34
Identity = 73/147 (49.66%), Postives = 98/147 (66.67%), Query Frame = 1

Query:  109 MEQVQDMLAKLRGFLDTAPGAPYLTKAEEATGVPKQLMVVGVLTLSSIAFAFVLGVASVCNLVGFVYPAYCSFKAIESTGSSQEDTQWLTYWVLYGCFSIVEVF-QGLVNNLPFFYQFKFAFLLWCMLPSTRGASLLYASVLRDALR 546
            ++ V+  L+ LR  LD  P    L +AE+A  VPK+ +V+G L +  +   F +G  S+CN+VGFVYPA+ +F+AIES   + EDTQWL YWV+Y  FSI+E F   L+  +PFFY FK AFLLW MLP T+GA  LY S L+D L+
Sbjct:   24 VDTVKAKLSVLRNKLDQIP---VLQQAEDAVKVPKEYLVLGGLVMFVLLIFFGIGAGSLCNIVGFVYPAFKTFEAIESQNRA-EDTQWLIYWVVYAFFSIMEAFIDFLLYWIPFFYAFKLAFLLWAMLPQTKGAKFLYDSFLKDFLK 166

[Close]

BLAST of jgi.p|Trimin1|352209 vs. uniprot
Match: A0A7S2L964_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2L964_9STRA)

HSP 1 Score: 130 bits (327), Expect = 1.370e-33
Identity = 71/145 (48.97%), Postives = 95/145 (65.52%), Query Frame = 1

Query:  115 QVQDMLAKLRGFLDTAPGAPYLTKAEEATGVPKQLMVVGVLTLSSIAFAFVLGVASVCNLVGFVYPAYCSFKAIESTGSSQEDTQWLTYWVLYGCFSIVEVF-QGLVNNLPFFYQFKFAFLLWCMLPSTRGASLLYASVLRDALR 546
            QV+  L +LR  L++ P    L KAE+   +PK+ +V+   +L    F F +G  S+C++VGF+YPA+ SF+AIES   S  D QWL YWV+Y  FS++EVF   L   +PF+Y FKFAFLLW MLPSTRGA  LY S L+  L+
Sbjct:    9 QVKAKLGQLRSKLNSVP---ILQKAEDKVKIPKEYLVLVGGSLLFFLFFFGIGAGSICSIVGFIYPAFKSFEAIESKNRSS-DVQWLVYWVIYAFFSVIEVFIDFLXXXIPFYYAFKFAFLLWAMLPSTRGAKYLYDSFLKPFLK 149

[Close]

BLAST of jgi.p|Trimin1|352209 vs. uniprot
Match: H3GEL0_PHYRM (Uncharacterized protein n=8 Tax=Phytophthora TaxID=4783 RepID=H3GEL0_PHYRM)

HSP 1 Score: 129 bits (325), Expect = 3.490e-33
Identity = 71/147 (48.30%), Postives = 91/147 (61.90%), Query Frame = 1

Query:  109 MEQVQDMLAKLRGFLDTAPGAPYLTKAEEATGVPKQLMVVGVLTLSSIAFAFVLGVASVCNLVGFVYPAYCSFKAIESTGSSQEDTQWLTYWVLYGCFSIVEVFQG-LVNNLPFFYQFKFAFLLWCMLPSTRGASLLYASVLRDALR 546
            ME+VQ  + K    LD  P    L  A++ATGV K  +V G   L+ +      G   +CNLVGFVYPA+CSFKAIE T   ++D QWLTYWV+Y CF++VE+F   L+  +PF+Y FK  FLLW  +PST GAS LY   L   L+
Sbjct:    1 MEKVQVYMDKWAKDLDKFP---VLQSAQDATGVEKLYLVAGGAALTLLLLLVGFGAGLICNLVGFVYPAFCSFKAIE-TDDKKDDVQWLTYWVVYACFNLVEIFADFLLYWIPFYYAFKLGFLLWLFMPSTLGASFLYMHFLAPFLK 143

[Close]

BLAST of jgi.p|Trimin1|352209 vs. uniprot
Match: A0A5D6XJM9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJM9_9STRA)

HSP 1 Score: 129 bits (325), Expect = 4.360e-33
Identity = 71/147 (48.30%), Postives = 93/147 (63.27%), Query Frame = 1

Query:  109 MEQVQDMLAKLRGFLDTAPGAPYLTKAEEATGVPKQLMVVGVLTLSSIAFAFVLGVASVCNLVGFVYPAYCSFKAIESTGSSQEDTQWLTYWVLYGCFSIVEVFQG-LVNNLPFFYQFKFAFLLWCMLPSTRGASLLYASVLRDALR 546
            M++VQ  + K    LD  P    L KA++ATGV K  +V G  ++  +      G   +CNLVGFVYPA+CSFKAIE T   ++D QWLTYWV+Y CF+I+EVF   L+  +PF+Y FK  FLLW  +PST+GAS LY   L   L+
Sbjct:    1 MDKVQVYVDKWSKDLDKFP---ILQKAQDATGVEKLYLVAGASSVLLLLLLVGFGAGLICNLVGFVYPAFCSFKAIE-TECKKDDVQWLTYWVVYACFNIIEVFADFLLYWIPFYYAFKLGFLLWLFMPSTQGASFLYNHFLAPFLK 143

[Close]

BLAST of jgi.p|Trimin1|352209 vs. uniprot
Match: A0A662YEH0_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YEH0_9STRA)

HSP 1 Score: 128 bits (321), Expect = 1.370e-32
Identity = 71/147 (48.30%), Postives = 90/147 (61.22%), Query Frame = 1

Query:  109 MEQVQDMLAKLRGFLDTAPGAPYLTKAEEATGVPKQLMVVGVLTLSSIAFAFVLGVASVCNLVGFVYPAYCSFKAIESTGSSQEDTQWLTYWVLYGCFSIVEVFQG-LVNNLPFFYQFKFAFLLWCMLPSTRGASLLYASVLRDALR 546
            M++VQ  + K    LD  P    L  A++ATGV K  +V G   +  +      G   +CNLVGFVYPAYCSFKA+ES    ++D QWLTYWV+Y CF+IVEVF   L+  +PF+Y FK  FLLW  +PST GAS LY   L   L+
Sbjct:    1 MDKVQVYMDKWAKDLDKFP---LLQSAQDATGVEKLYLVAGGSAVLLLLLLVGFGAGLICNLVGFVYPAYCSFKAVESD-DKKDDVQWLTYWVVYACFNIVEVFADFLLYWIPFYYAFKLGFLLWLFMPSTLGASFLYTHFLAPFLK 143

[Close]

BLAST of jgi.p|Trimin1|352209 vs. uniprot
Match: A0A8K1CKI1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CKI1_PYTOL)

HSP 1 Score: 127 bits (319), Expect = 2.710e-32
Identity = 71/147 (48.30%), Postives = 91/147 (61.90%), Query Frame = 1

Query:  109 MEQVQDMLAKLRGFLDTAPGAPYLTKAEEATGVPKQLMVVGVLTLSSIAFAFVLGVASVCNLVGFVYPAYCSFKAIESTGSSQEDTQWLTYWVLYGCFSIVEVFQG-LVNNLPFFYQFKFAFLLWCMLPSTRGASLLYASVLRDALR 546
            M++VQ  L K    LD  P    L KA++ATGV K  +V G   +  +      G   +CN+VGFVYPAY SFKA+ES    ++D QWLTYWV+Y CFSI+EVF   L+  +PF+Y FK  FLLW  +PST+GAS LY   L   L+
Sbjct:    1 MDKVQVYLDKWSKDLDKIP---VLQKAQDATGVEKLYLVAGGSAVLLLLLLIGFGAGLICNIVGFVYPAYESFKAVESD-CKKDDVQWLTYWVVYACFSIIEVFADFLLYWIPFYYAFKLGFLLWLFMPSTQGASFLYTHFLAPFLK 143

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|352209 vs. uniprot

BLAST of jgi.p|Trimin1|352209 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A836CMB1_9STRA	1.290e-103	100.00	TB2/DP1, HVA22 family-domain-containing protein n=...	[more]
K3WBL2_GLOUD	5.760e-35	49.66	Uncharacterized protein n=1 Tax=Globisporangium ul...	[more]
A0A7S0ASR9_9STRA	1.810e-34	48.98	Hypothetical protein n=1 Tax=Minutocellus polymorp...	[more]
B7FT25_PHATC	3.200e-34	50.34	Predicted protein n=3 Tax=Phaeodactylum tricornutu...	[more]
A0A7S1D0I5_CYCTE	4.070e-34	49.66	Hypothetical protein n=1 Tax=Cyclophora tenuis Tax...	[more]
A0A7S2L964_9STRA	1.370e-33	48.97	Hypothetical protein n=1 Tax=Leptocylindrus danicu...	[more]
H3GEL0_PHYRM	3.490e-33	48.30	Uncharacterized protein n=8 Tax=Phytophthora TaxID...	[more]
A0A5D6XJM9_9STRA	4.360e-33	48.30	Uncharacterized protein n=1 Tax=Pythium brassicum ...	[more]
A0A662YEH0_9STRA	1.370e-32	48.30	Uncharacterized protein n=2 Tax=Nothophytophthora ...	[more]
A0A8K1CKI1_PYTOL	2.710e-32	48.30	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_112	contig	Contig_112:70546..80393 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|352209\|estExt_Genemark1.C_Ctg_1120012
Description	Source PGD
COG category	U
Max annot lvl	121069\|Pythiales
EggNOG OGs	COG5052@1\|root,KOG1725@2759\|Eukaryota,1MCMB@121069\|Pythiales
Evalue	2.3e-37
Seed ortholog	65071.PYU1_T002353
Hectar predicted targeting category	signal anchor
TranscriptId	352531
Track	FilteredModels1
ProteinId	352209

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|352209	gene_15505	Tribonema minus UTEX_B_3156	gene	Contig_112 70546..80393 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|352209	Trimin1\|352209\|estExt_Genemark1.C_Ctg_1120012	Tribonema minus UTEX_B_3156	polypeptide	Contig_112 70654..78980 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_15505_1	exon_15505_1	Tribonema minus UTEX_B_3156	exon	Contig_112 70546..70740 +
exon_15505_2	exon_15505_2	Tribonema minus UTEX_B_3156	exon	Contig_112 74005..74096 +
exon_15505_3	exon_15505_3	Tribonema minus UTEX_B_3156	exon	Contig_112 75420..75503 +
exon_15505_4	exon_15505_4	Tribonema minus UTEX_B_3156	exon	Contig_112 76667..76769 +
exon_15505_5	exon_15505_5	Tribonema minus UTEX_B_3156	exon	Contig_112 77677..77736 +
exon_15505_6	exon_15505_6	Tribonema minus UTEX_B_3156	exon	Contig_112 78942..79018 +
exon_15505_7	exon_15505_7	Tribonema minus UTEX_B_3156	exon	Contig_112 80116..80393 +

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_15505	UTR5_15505	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_112 70546..70653 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_15505	CDS_15505	Tribonema minus UTEX_B_3156	CDS	Contig_112 70654..70740 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_15505	UTR3_15505	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_112 78981..79018 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_112:70546..80393+
coding sequence from alignment at Contig_112:70546..80393+

spliced messenger RNA

>mRNA_15505 ID=mRNA_15505|Name=jgi.p|Trimin1|352209|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=889bp|location=Sequence derived from alignment at Contig_112:70546..80393+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CTGACCTGCACTGTAAGCCCCAGTAAAGCTTGGAGGTGAAGGAGGAGCCG
CTTGCCTTGCCAGACCGCCGCTCGAAAGCACACCGGATACTGCCACAGGG
GAGCAAATATGGAACAGGTTCAGGACATGCTGGCGAAGCTGCGTGGGTTT
CTTGACACGGCGCCGGGCGCACCATACCTGACGAAGGCAGAGGAGGCGAC
TGGAGTGCCCAAGCAGCTCATGGTGGTGGGGGTTTTGACGCTCAGCAGCA
TTGCCTTTGCCTTTGTGCTCGGAGTCGCGTCTGTCTGCAATCTGGTGGGA
TTTGTGTACCCAGCGTACTGCTCTTTCAAGGCGATCGAGAGCACAGGATC
CAGCCAGGAAGATACGCAGTGGCTAACGTACTGGGTGCTGTATGGATGCT
TCAGCATAGTGGAGGTGTTCCAGGGCCTGGTCAACAACCTGCCCTTCTTC
TACCAGTTCAAGTTTGCATTCCTGCTGTGGTGCATGCTGCCTTCAACACG
AGGAGCGTCACTGCTGTACGCCTCTGTCCTCAGGGATGCGCTGAGGCCGC
TGGTAAAGCCCAAGGCCACCTGAGACCGCCCTATTCAGGCTGAGTGGTGA
CGTTGCTGCAGATGCGGTCACCCAGCAACAGCAGGCGCAACAACAATCTC
AGCAACAACCGCAACAACCGTTTTATCTCATAGCCGTGCGCGCTTGCGTC
TGTCTCCCCTGCAAGAAACGGCAGTTAGGGCAGTTACGCACTCTGGGCAA
GCCGCCGCGTGCACGCTGCATGTACACATGGGAATGGAGAATGTGACTGA
ATCTGAGTGATGCATGCACTCGCTGCCGCAGTCGCAGCGAGTGCAATGAC
AATTGAGTGAGTAATGTACAAGTGATGGTATAAGGCAGC

protein sequence of jgi.p|Trimin1|352209

>Trimin1|352209|estExt_Genemark1.C_Ctg_1120012 ID=Trimin1|352209|estExt_Genemark1.C_Ctg_1120012|Name=jgi.p|Trimin1|352209|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=155bp
MEQVQDMLAKLRGFLDTAPGAPYLTKAEEATGVPKQLMVVGVLTLSSIAF
AFVLGVASVCNLVGFVYPAYCSFKAIESTGSSQEDTQWLTYWVLYGCFSI
VEVFQGLVNNLPFFYQFKFAFLLWCMLPSTRGASLLYASVLRDALRPLVK
PKAT*

mRNA from alignment at Contig_112:70546..80393+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_15505 ID=mRNA_15505|Name=jgi.p|Trimin1|352209|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=9848bp|location=Sequence derived from alignment at Contig_112:70546..80393+ (Tribonema minus UTEX_B_3156 )
CTGACCTGCACTGTAAGCCCCAGTAAAGCTTGGAGGTGAAGGAGGAGCCG
CTTGCCTTGCCAGACCGCCGCTCGAAAGCACACCGGATACTGCCACAGGG
GAGCAAATATGGAACAGGTTCAGGACATGCTGGCGAAGCTGCGTGGGTTT
CTTGACACGGCGCCGGGCGCACCATACCTGACGAAGGCAGAGGAGGTGAG
GAATGGCTTACACATGAAGCTCTCAGCACCCTGCATGTTGAAGCTACATA
TACTAAGCGATTACGGGAATCCAAAGTCGCATTCGTTGGAGCCGGGAATG
TGGAACTTTTCAGCAGCGTCATCACAAGCCGCCAACGACTAATGCTGTAC
AGGCAAACAGCGTCTGTTGTGAGTTCTACGATTGAAGTCTGGCCCTGCTT
GCAGCGATCGACGGCGAACTGTGCGGTTGCGATCCATTTCGGTTCGATTC
AACAAGGCCAATATATCTTAGATCTACCAGGGCCTGGCGAAGGCTGTCAA
GGCGTTGATGCGCACTCGCAGCCATTAGCGGCTGTAGGTTGATTTCCGCG
CCGGATGCTACCGATGTTGGCGTGTGTTGACTCCATCGCGGCTGGTGCTC
GGATCCACGGTACATGATTGAAGGTTGCATAGCATAGTGAAGACACAAAT
ATGGCTAGATCGCTACAACGACATTACGTGTGGCCATGCAAGGCTACCTG
CAGTGAATAAAAGACACACGTTGCCGGTAGAGCTTGTGAAGTGGCTTCAA
GGCCTCGTAACCCATAGGTTTGTGCTGTGATTATCCTCATGCATCTACAA
AAAATGGAGTAAAATGAATTCCTGGACACCGGTTTGATCACGTGTGCTGC
GCAATGGCGCATGGTTGCAAATTAACGGATGCCAGACGCTTTTGCATTCA
AAGTGGGCTCCATTCGTATACACTCTCAATTGTCAACGGTCACAACTTCA
TGTCGCGGATACCACTTCCTTGCGTCGAGCAGCAGTAATTGGGTGGCCTG
ATTGATGAGATGATTCCGATTCCTGAGGACAGCGTCGCGTGAAAGTGGCA
GCAAAGTGAGACACCAAAAGTTGCTGCCAAGCTGCAATACTGCTGCACTG
CTCGACCTCATGATACGGATATAATTACCATTTTTCCAACATACACCACG
TGACAAATGTTGTCTGGCTCCTTGCAGCTGTAGTGACTGTGAGGACAGAC
ACATTGAACACTTTGGCATGAGTGTAGCCACCGCAGACAAGGCCAGTGGC
TATGTTGCACAGTGTGATGGTGATGACTTCAGATGTACCGCCATACTTGG
TCGTCACTGCAGTTTTTCGGTGCAAGAAAAAGTGGCTAAAGTCTACTGTG
ATGAGAACGCTGTGACAGGCGTGCTTATCTGTGATACAGTAGGCCAAAAT
GCTTACAACAATGCACCCCTGGCAACGTCGAACAGCAAACGGTCAGTTGT
AGCTTTTCTGAACTGCACTGAACACAATGGAATACAATTTGCATGGGCGT
TTGTGCAGAAGAAAAAAAAAAGTTGCTGCTGAGCAGGGCAGGTCCCAAGC
CCACAACCTCAAGAAATAAGTAAGGAAATGGCATATTGACCCGATATAGC
AGGTACGCCTAATGTGAGCAATGAATTTTGTGTGGTTTGGTGAGCTCACA
AAGCAGTGCACTCAGGGCTTTGTGCAGGGTAATATGATGCCGATTACCAT
TCATCACTACAAAATATTTCACATCGATTTTTATCACTAAGCGCCGAATG
CATGTACACGCAAAGTGCGCATGCGCATGATGAGCACTGGGGTGAGATCA
ACAGGCCACTTCTGAGCAGTCACCGGCTAAGCAAGTCTGAATCTGAGTCA
TATAAGTACTGCATGGGCCACAGGGCATGGGAGCCTGACTCCATGTCAGG
ACTTGGTGGAGCGCATCTGGTGGGTCTTGAAATGCAATTCTGGTATCTGT
CAGTTGACCAGATTATTGTGCAGAAGAAAATGAATAAATGAGAAAATGAA
TGTGTTGCCATTACCAATGACTGAATTAAGGAATGGCATTGACAGCACGC
TAGTGGTCGAGTGCAGAACATCAAGCAAGTGAGTGACAAGTGACATGGAA
TGCACAGAGAACAGTGTGCTGCCATGCTGCAAAGAGGCGCAGCTCATGCA
TTGCAAAGAGTCTGAGCAGGGCGGTGTAGCGCACTCAGTTGAGTTTGCAC
GAGCTGGGGATACAGACAACTAGAATGTGTTCTCGCCAACAACGATGAAA
GAGTGTGCGAAAATGGACTTGCTGTTTTCATATCACAGCTGCTGACCAGT
TTACAACATACATGTGTGCAATATCGACAAACATGTGCGCAATGATAGGC
AGGCTGTTTTCCACATCACATACTTTGTCTCGTCAACTCCGTATGCACAC
ACCCAACGAAACCCCTGGGTCAGCAGCATACACGTAGCGCCACGGCTGCC
ATTCAGTCATGCTAGCACCTCTTTGGTGAGCACTGCTGCCGCTGCCTCAT
TACTGTCGTGGCACAGGCGCTTTGTGAAGGGGGGGTTAGGCTGCTTCACC
TCAACAGCATCAGCCTCGCCGATGAGAGTGCCTATGCCAACCGTTGTAAC
TGCCGTAACTGTAAATTACCATAGGGCTAACCTCAACGTTTTCAATGCCG
CCCATAAGGGGCACGGCGAACTTCAGCAACATAACAATAATTGACATTGG
CACACACCAACCATACTAAGTAGCGGTTACAATAATGGTAACTGTAAACC
ACCAAACACTAGCCATACTATCGCTGTCGGCGCCTGTGTTTTACCAGAGC
AGGATGACAGACGCGGGCTAGCGCACACCAGCGGCGATCGACTCTGTGAC
AAGCTCACAACTTCAAGTGTCCCAGTTTGAGTCTTCGATTGCCGTGTGGA
GCTGTCAGATGCCATTCAAGTGTTTTTGAGTACGTGTACCGGGATCACTG
ACTCTTGGGCTTACCTGCAATAGGCCAATATAAGCATGATGGCATCAGAT
GCTGAGCAACTCTCACCAAGATCGACAGAAACCTTCAGCCGAGGAATGAA
CATTCAGTTGAAATGTAATTGGGAATCAATTCAATCGAAACCGAAACCAA
TTTACTCGCTCGATCCACTCAGATATCGCTTGCCAAATCCCAATCGTGCC
CATCCACATTATTGATGCTCTGGTCCCTGCTGTTACTGCTTCGAATGCCA
GACCACACAAACTTAACTGCCCAAGTCTGTGAGCACGTCTCAAGTGCAGT
GTGACTCTGAACAACCGAGTGTGCCCTCTTTCTGTTGTCCGCTTTTTGGT
CAATGTTGCTGCAGGCGACTGGCGTGCCCCTACTTCAATTGCCATACCAT
ACATACCTCACTTGCCAAATTAGCAAGCACGTCTCAACTGCAGTTAATTT
CAAACCTCTGATGGGCTCTATTTCTTTTTGTGCGCTCTTTTTTGTTGCTA
CCGCTGCAGGCGACTGGAGTGCCCAAGCAGCTCATGGTGGTGGGGGTTTT
GACGCTCAGCAGCATTGCCTTTGCCTTTGTGCTCGGAGTCGCGTCTGTCT
GGTGAGACCCCCAACAAGCTGCTGTTACATGTTGAGCAATGAAGTTTTAG
TGCTCGGGGTCGCGTCTGTCTGGTGAGGCCCCTAAGAAGCTGCTGTTACA
TGTTGAGCAATGCTGCTTCTGTATCACCAGGAGCCATACTGCTGTTGTAT
CAGCAATGCGGAGGCTGTATCGCTAGCAATGCTGTGGCTGCATGGCAAGC
AATGCTCCCTCTGTATGAGCAGTGCTGCAGCTAGTATGTATGACGACTCC
TAAATGAGCAATACTGCAGCTGTATAATGATCGTTGCTGCAGCTGTACGA
TGAGCGATACTGCTGTTATTTGAGCAACGCTGCAGTTGCATGATAGTCAT
TGTTGCTGATGTTTAGGGTGGGATCATGGCGCGCTGTGCAACGTTGGCTC
TGCTTAAAGCTATCGCACTTCGTATCTGTGGTACACGTCGAAGTACCGGC
ACACCTAGGACTGGTACACTGCCGGACTGCATGTGCACATAGGCAGTGCG
CGCGATGCAGCATGTGGCCTCCTGCTTGATGATGCTGATCAATTTTGAAT
GGCGCAGCGGGTTTCGGTGTGCTGCATATCACTAGGGGGGGGGTTAGGTA
CCTTCCCTGCTGCTGCCACACACGTTTCTGCAGTGATACGTATGGCCATG
AAGTAACACCGCGTGTAGCTCTAGTGCTTTCAGTTGCACAGGCACGCTGC
TTCTGAGCAACATGTCTTGCACGATGGCACACTGCCCGTGACTTTGACTC
ATGTGTAGCTGACTTTGACAATGCGAGTCTGAATCTGACTCTGCCACAAA
TTGACAGTGCGTGTTGCAGCAATCTGGTGGCGTGCAACTGTGCTCATCAA
TTTTGGAGTGCTATCTTACAAACAGGGTCCAGCCCTCCTCCCCCCCCCCC
CTCCTACCAAGACATTGCAAGCTGCCAGCACTGCATCAACTGCACTACGC
AAAAGCATATTGAGGGCACATCAATACAGCAGCTCAGTGCAAGGGCGCTG
CCTCAACTCGTATGGTTTGTACAACGTATTAGCATGTGGTCCATCAGTGC
ACTGCTGCGGCTCTTATTGCCTGTACAATATCATGACTGCAGCAGCGGCG
ACCACGGTTATTGGTGGAAGGCACTTGCGGCTAACTACTCATTGTCACCT
ACGTAGAGCTCTACGATCTTTTGATTCGTTTCCATCATAATATATGACGC
TTTGCTGCGATTGCCATGGCCTATGAATACAATTACACATCATGACATAT
GACGTATAGACCCAACTCCCATGGCCAGTACTACAACATCATAACATGCG
ACGTATGATTTTTTTGCACTGCAGCAATCTGGTGGGATTTGTGTACCCAG
CGTACTGCTCTTTCAAGGCGATCGAGAGCACAGGATCCAGCCAGGAAGAT
ACGCAGTGGTGAGCTCTCGTGCGCACACTTCAACCGGGGACGTGCCATGT
TCAAGTTTAGAACTTCAAGTGATTCTGCTTCGCACTGAGCCCAACTCCCA
AGACACTGTCCAGCGCATTGTGTAAGATGCTATTGTGAGGCCATTTTGCA
ATACCAGCAAATGCGACAACATGGTCACTCTTGACCCAACTCAAGTCACT
CGACCTCAGTAACTCTAACCCTGACCCCTAAGGCAGTTGAATGTCAGATT
GGGGCGCTCATTCTCAAAACATTGAGCAGTACAGTCGCTGCTACAAAGCC
TGCTCGTGAATTTCAAGGCAAATCTTAACTCACCTTCCACTGGAGAAAAC
TTGGTGGCAACCAAGAACAATTGTTGGTTGTTCACAGGAACATCATCACC
CCTTCTCTACCTTCGAGAGATGACTGAGGTGGTGATGCTTGGTCCATCAT
ATGTGCATGTTGATGCTGCATCGTTGGTCTGTGAGCCAATGCAGGCCCCA
TGAAAAGGCTGTGAGAGCCCAAGCCTGTGGTCGGGGCTTGTCTATCGCAT
CTAAACATCAGACTGGCCCAGAAATAACAGCAGATACTCAAGCGCACCCA
AACAATGTATGCTGCCATCTTGCTCGTTCTCCTTGTGTCGATGCTGCCTC
ATCGGTCTGCATGCTGATGCAGGCTTCATGCTGAGGGCTGTGAGCTTACT
TCAGGATTACGGCTGGTTCTTGTTCGCTCGTATTCGAGTCAATCGTGGCC
CAAAACATGTGGTTGTAACATCAGAAGCTGATGGACTTGTTTGCCGCATC
TGAGTCAAATGAGGTCCAAAAAAACATGATTGCGGCGTTAGCAGCTGACA
GACCTGTCTGTCGCGTTTGAGTCAGAAGCAGCCCAAAAAATACCATTGCA
GCATCAGCAGCTGACGGACTCGAGAGCATCCAAAAGATGTACACTGTCAC
CTTGCTCTCTCTTGTTGTGCCTTTGGTCGTATTCGCATCTCATGTGTGCT
CTTGTTCTCATCTGTCTTAATTGAGTTCAGAGCAGCCAGAAACATCTGCG
CAATGACAGCAGCCGACCCAGATCACACGATGTATACTGTTATCCTGCTG
TTATTTGTTATGCCTTGATGTATCGTATTCACATCCCGTGTGTGCTCTTG
TATTTGTCCGTGCCTCTGCAGGCTAACGTACTGGGTGCTGTATGGATGCT
TCAGCATAGTGGAGGTGTTCCAGGGCCTGGTCAACAACCTGCCCTTCTTC
TACCAGTTCAAGTTTGCATTCCTGGTGAGTCAACACTTGACGTTGATGAC
CTGTTTGAAGTTGTTGAATGCACTTTACACTGCTGACAACGCCCTGTGAT
GATTTTCTGGTCAACAACCTGCCTGTCTTCTACCACTTCAAGGTTGCATT
CCTGGTGAGTTCATTCCTGGTGAGTTCACGGTTGAAGTGTGCTGTTTTAA
AGAAGTTGTTTTACTGTACTTCAAAACTGCAGATGCCCTGTTTGCAAGTT
TGAAGTTTCTGGGCGCACTGTGCACGTCATGCACCGTACACTTCTGAACG
CACCGAGCAATGGTACTGTGCAAAGCCAGACATATGGTGCTTGTGCAACA
CACCTAGCAGAACCACGGTCTGTAACGTCATGGCTCTATTGCACATAGCT
GTACATGGCTCTCTGGGCTGTGAATGATAAGAAGCGGCTTCTGTCTCTTT
ATATGCTGCTGATTGTACAATCACTGCTCAAATTAACTTGTGCATCCCTT
GCAAGGGACGGAACTGATGAACAGTAGCCTGCACTCCTTACATGCTTTGC
ACTGTACAACAAATGTGCAACTCATTGTGTGCATCAGTTACATTGACAGC
ACGCACATGCGCCAAGGCGTTGTTTACTACGGTTGACATCACCATCGTCG
TCCTTGTCTTGCCTACCTTAACACTTAGCAGCCGGGGCTGCGCCTAGTGT
TGTGGGTATGTGCCAATATCCACAAGAGATGCATTATGTTTCGCCTACGC
ACATAAGGTACCAGGGGTGCAGCCATGTGCCTACTATATGCGCCTGCGCA
TATCCACACTACTGTTGATCACGATCTGGTGTTGTTACCCCCCAAGCTGT
TACCCCCAACCCAAACCTCACAATCCACTCCCGAATGCCTGCTTCCTTTC
TGTGCTCTCTTCTCTGTGCTCGCGTGCGCAGCTGTGGTGCATGCTGCCTT
CAACACGAGGAGCGTCACTGCTGTACGCCTCTGTCCTCAGGGTGAGCGCT
GCGCACCATTGAAGTTTAAAGTTTGAAGTTCAAGTTTGAAGTTTCAAGCA
GCTCATCTCAGAAGCACACATCATGATTAGTCAGTTGAGTTTGTAAATAG
TAGTTGATACTGTGCCTCTGTCCGCAGGGTGAGCACCAATCACCATTGAA
CTTTTATAAAGCTCACGTTTCCAGCCATGCATCCTTTGCATGCATGAGTG
GCAGTTCCGTTACAAACGTGTTACCGGAAGAAGTATACTTCAGAATACAT
GATGTGTCACTTCAACACGAGGGGCGTCGCTGCTGTACGACTGTTCTCAG
GCTGAGCACTGCTCACCATTGAAGTTTGGATTTTGAAGCAGCGCAGCACA
CACTTCTCAGAACTACAACATCATTACTACTCAGCTGAATTTGTGAAGAG
TAGCTGACGCTATGCCTCAGGGCGAGCACAGATCGCCATTGAAGATTATT
GAACCTCACATTTCCAGCCATCGATACTGCTAGAGGCAGCATACCTGGAA
GCTGTAGATAGGGCATTCACTTCTGCACTCTTCTTGCACCCTGGCCATGT
GCGTGCCGCTGAGCCGTGCACCACGCGCTTTGGCGGTGAGCGCTGCTGCG
ATGTACAGAACGAAGTTATTAGTACGTTAACTATTCTTGGACCATGTCCC
TGTGCAGTTCGTGTGTTAATGTTAGGGTTGGGCAATCGGTCATCACCTGT
GTACTTTCTGCATCATCTGATATGTCCCTGTTAAATTATGCATGTAGTTA
ACGCGATGATCCACTTTTCGCCAGCGCACATTGTATCCCCTGCAGGCCGT
ACAAACCATGGAGGGGGAACACTGCGCTAGACAATGTGTATGTATGCATG
CGTTGACTGGCGGTCCGTCCTGCAAGGACAGTTGTTACATCCTGAGGTCA
AACTGTCGTTTCGTCCTGAATTCATTTTCTGCATGCCAAGTGCACACTAC
TCAGGGGGAAATCTTGTGCTCAGGGGGGACAGTCTTGTGCTGAGCACTGC
AACCACGTGAACTGAGCATTGCTGCGCCTCTCCTGCTGCCTGTAAACAAT
TAGGCGGCCAACCATACCTTGTCACCTAGCGCCCTACGAACTGGTGATTC
GTTTCCATGATACATGTAGCGCACTCACGCCATCTTGTACTGAGCGCTGC
CACCATGTGGACTGAGCGTTGCTGCGCCTGTGCTGCCACTTCACAGGATG
CGCTGAGGCCGCTGGTAAAGCCCAAGGCCACCTGAGACCGCCCTATTCAG
GCTGAGTGGTGACGTTGCTGCAGGTATGTCAGATTTAATATTACTGGGCC
GTGCTTGTGTGTATGTCTAGCTCCAAGCCCACCTGAGACCCCTATTCAGG
CTGAGAGGTGACACAAGTGCTGCTGCAGGTATGCGGACTCCATATCACTG
GGCCATGCATATGGTGTCAGCTCGAAGTCCATTTGAGACCCCTATTCAGG
CTGCGAGGTGACACACGTTGCTGCAGGTATGCAGGTATTTGATGTTAGCG
GGGCATGTATGTATCTATGGCTCGAAGGCCACCTGAGACACTATTCAGGC
TGAGAGGTGACACGCATGTTGCTGCAGATATGCAGATCTGATGCCACTGA
GGTGGGTATGCATGTAAGCTTGAGGGCATCTAAACTTGAAGCCACTTTCT
GCACAGCGCATGGGGGTGTGGAATTATGGTACTGCGCATGCGCTGTAGTA
TATGTGTGTTACAGAGCACGGCTGTCGTGCCTACTACAATGAAAAGCTGA
AACCCCTGCTGCGTGTTTCGACGAGCTGAATGGACATGACGTGACTGTAG
CCGAGCATTGCCCACTACGCCTTCCGTGTCCCAGTATCATTTACGTACTG
TCTTTGTTGGGGTTCAAGCTTGCTTTTATTTGCAGCGGAGGTTGTCATGT
TTTTACTGCTGGTACAAGTAAATCTTCGAAAACTCGCCACTTGCAGGCAG
CGGTCGCAGGACTTGAAGGCCGAAATCCCATGTAACGCGTTCTGAAATGT
TACCAGTGACAGCCTGTGCACAGCCCTGTGGCATACTGCTGTTAGAGCCA
TGCAGGGTAGGTTGTGTGATTGGGAGCGAATGGCAGCTAACACAGCTACT
GAACCTGTCTTGCAACAACAAAGTGGCCTCTTAGTAATGTGCACGCCTGT
ACAACTTTTGGAAACTGACTTCAAGCGCAACTGTTATAGTTGCTAACTGG
GGATAGGGTTGTGGTATCATTGCGGTTTTACGAGAGGTTGGGTTTTACCC
TCATTATGAACCGAGCAGCGTTGTGACTAGCAGCACCTACAGCGCCGCGC
ACATAACATGCATGAAAATCGACTTACCCCAAGTTCCATGTTGGCGTTGC
CGATGTATGTACGTATGCAGATGCGGTCACCCAGCAACAGCAGGCGCAAC
AACAATCTCAGCAACAACCGCAACAACCGTTTTATCTCATAGCCGTGCGC
GCTTGCGTCTGTCTCCCCTGCAAGAAACGGCAGTTAGGGCAGTTACGCAC
TCTGGGCAAGCCGCCGCGTGCACGCTGCATGTACACATGGGAATGGAGAA
TGTGACTGAATCTGAGTGATGCATGCACTCGCTGCCGCAGTCGCAGCGAG
TGCAATGACAATTGAGTGAGTAATGTACAAGTGATGGTATAAGGCAGC

Coding sequence (CDS) from alignment at Contig_112:70546..80393+

>mRNA_15505 ID=mRNA_15505|Name=jgi.p|Trimin1|352209|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=465bp|location=Sequence derived from alignment at Contig_112:70546..80393+ (Tribonema minus UTEX_B_3156 )
ATGGAACAGGTTCAGGACATGCTGGCGAAGCTGCGTGGGTTTCTTGACAC
GGCGCCGGGCGCACCATACCTGACGAAGGCAGAGGAGGCGACTGGAGTGC
CCAAGCAGCTCATGGTGGTGGGGGTTTTGACGCTCAGCAGCATTGCCTTT
GCCTTTGTGCTCGGAGTCGCGTCTGTCTGCAATCTGGTGGGATTTGTGTA
CCCAGCGTACTGCTCTTTCAAGGCGATCGAGAGCACAGGATCCAGCCAGG
AAGATACGCAGTGGCTAACGTACTGGGTGCTGTATGGATGCTTCAGCATA
GTGGAGGTGTTCCAGGGCCTGGTCAACAACCTGCCCTTCTTCTACCAGTT
CAAGTTTGCATTCCTGCTGTGGTGCATGCTGCCTTCAACACGAGGAGCGT
CACTGCTGTACGCCTCTGTCCTCAGGGATGCGCTGAGGCCGCTGGTAAAG
CCCAAGGCCACCTGA