mRNA_15500 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|174279 vs. uniprot
Match: A0A835ZGA3_9STRA (Sulf_transp domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGA3_9STRA) HSP 1 Score: 615 bits (1585), Expect = 4.240e-221 Identity = 346/346 (100.00%), Postives = 346/346 (100.00%), Query Frame = 1
Query: 1 MLPATEWTLQQSLAGGIVLGSSTALMMVLKGRIAGLSGIFATITQPLDDSWHWKAAFTAGFAGASAAIAIWYPGAFITEVGYSRVRYALAGALVGFGARLGNGCTSGHGICGLARLSRRSLVAVLTFMTAAAAVATSLELNGALTTLPPGPADQPGAPSGAAAXXXXXXXAAQRCYAKRDITSLFVSVPLGALFAAGLALAGMGNRGKVLGFLVPRIGGGDGGGAWDPSLALVMGGAIPVAALGFAFTKRRTPLLGGAKCPPPPSDIDLPLVLGAWIFGAGWGAAGLCPGPAVLLAAAGVRNVWAYFVPAMAAGMAGAKAVNAALARXXXXXXXXXXXXXSDSKQH 1038
MLPATEWTLQQSLAGGIVLGSSTALMMVLKGRIAGLSGIFATITQPLDDSWHWKAAFTAGFAGASAAIAIWYPGAFITEVGYSRVRYALAGALVGFGARLGNGCTSGHGICGLARLSRRSLVAVLTFMTAAAAVATSLELNGALTTLPPGPADQPGAPSGAAAXXXXXXXAAQRCYAKRDITSLFVSVPLGALFAAGLALAGMGNRGKVLGFLVPRIGGGDGGGAWDPSLALVMGGAIPVAALGFAFTKRRTPLLGGAKCPPPPSDIDLPLVLGAWIFGAGWGAAGLCPGPAVLLAAAGVRNVWAYFVPAMAAGMAGAKAVNAALARXXXXXXXXXXXXXSDSKQH
Sbjct: 1 MLPATEWTLQQSLAGGIVLGSSTALMMVLKGRIAGLSGIFATITQPLDDSWHWKAAFTAGFAGASAAIAIWYPGAFITEVGYSRVRYALAGALVGFGARLGNGCTSGHGICGLARLSRRSLVAVLTFMTAAAAVATSLELNGALTTLPPGPADQPGAPSGAAAXXXXXXXAAQRCYAKRDITSLFVSVPLGALFAAGLALAGMGNRGKVLGFLVPRIGGGDGGGAWDPSLALVMGGAIPVAALGFAFTKRRTPLLGGAKCPPPPSDIDLPLVLGAWIFGAGWGAAGLCPGPAVLLAAAGVRNVWAYFVPAMAAGMAGAKAVNAALARXXXXXXXXXXXXXSDSKQH 346
BLAST of jgi.p|Trimin1|174279 vs. uniprot
Match: A0A8J5XUX3_DIALT (Sulf_transp domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XUX3_DIALT) HSP 1 Score: 179 bits (453), Expect = 3.140e-49 Identity = 141/329 (42.86%), Postives = 182/329 (55.32%), Query Frame = 1
Query: 37 LAGGIVLGSSTALMMVLKGRIAGLSGIFATITQPL--DDSWHWKAAFTAGFAGASAAIAIWYPGAFITEV-GYSRVRYALAGALVGFGARLGNGCTSGHGICGLARLSRRSLVAVLTFMTAAAAVATS---LELNGALTTLPPGPADQPGAPSGAAAXXXXXXXAA-----------QRCYAKRDITSLFVSVPLGALFAAGLALAGMGNRGKVLGFLVPRIGGGDGGGAWDPSLALVMGGAIPVAALGFAFTKRRT-PLLGGAKCPPPPSDIDLPLVLGAWIFGAGWGAAGLCPGPAVLLAAAGVRNVWAYFVPAMAAGMAGAKAVNA 969
L GG L + + ++L+GRI G+SGI A ++ P + HW+ AF AG ASA +A P AF + S + +AGALVG G +LG+GCTSGHG+CGL R SRRSLVAV TFM A++ L L ALTT PA A SGA A XXXXX A + A R+ +S LGALFA GL+++GM +VLGFL P G WDP+LA V+GGA+ V F RR+ PLL A P D+ L++G+ FG GWG AG+CPGPA+++ AG + V FV A+ A +A A
Sbjct: 24 LLGGACLALAASAHLLLRGRITGISGICAALSSPFLAPEKRHWRVAFLAGMGVASALVARLLPEAFAADAQDPSPLAAFVAGALVGAGTKLGSGCTSGHGVCGLPRFSRRSLVAVCTFMAVGVITASTIGALGLRPALTT----PAPPSAALSGAVAAXXXXXLAVLIGGRTPAANGKDELAPREHVDAALSAGLGALFAVGLSVSGMARPSRVLGFLDPFSRAG-----WDPTLACVLGGALAVNVCTFGLILRRSRPLLARAFELPTARDVTPSLLVGSATFGLGWGLAGVCPGPAIVILGAG-KPVAVAFVAALLGAQAATEAAQA 342
BLAST of jgi.p|Trimin1|174279 vs. uniprot
Match: A0A5A8DR13_CAFRO (Sulf_transp domain-containing protein n=5 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DR13_CAFRO) HSP 1 Score: 173 bits (438), Expect = 1.900e-47 Identity = 140/348 (40.23%), Postives = 188/348 (54.02%), Query Frame = 1
Query: 1 MLPATEWTLQQSLAGGIVLGSSTALMMVLKGRIAGLSGIFA--TITQPLDDSWHWKAAFTAGFAGASAAIAIWYPGAFITEVGYSRVRYALAGALVGFGARLGNGCTSGHGICGLARLSRRSLVAVLTFMTAAAAVATSLELNGALTTLPPGPADQ-----PG---AP--SGAAAXXXXXXX-----------AAQRCYAKRDIT--SLFVSVP-------LGALFAAGLALAGMGNRGKVLGFLVPRIGGGDGGGAWDPSLALVMGGAIPVAALGFAF-TKRRTPLLGGAKCPPPPSDIDLPLVLGAWIFGAGWGAAGLCPGPAVLLAAAGVRNVWAYFVPAMAAGM 945
M+ ++ +T S GG+++G+S A M+ GRI G+SGI + T LD +W KAAF G ++AA +++P F T + + A AG LVGFG ++G+GCTSGHG+CG+ARLS RS VAV TFM+ A A A++++ AL L G Q PG AP +G A AA++ A +T SL SVP +GA FA GL ++GM N +LGFL P G W+P+LA+VMGGA+ V + F + PLLG P DI LVLG+ +FG GWG G CPGPA+ A G + A V A+AAGM
Sbjct: 1 MMISSAFTPMASGIGGVIIGTSAAANMLGNGRITGISGILSGTLFTSGLDSAW--KAAFLGGMLSSAAAQTVYFPEYFGT-LKINPAMSAAAGLLVGFGTQMGSGCTSGHGVCGMARLSARSWVAVATFMSTAIATASTVQAVPALKELVFGAEGQEFFVIPGSEYAPLVAGIAGVGLLVEAIFSRASESNLHAAKKEEADSKVTHASLTASVPAIGLSWAIGATFAFGLGMSGMLNPAIILGFLTPTSAEG-----WNPNLAMVMGGAVAVTGIAFPLIVNNKAPLLGDRWHLPTAKDITPGLVLGSAMFGVGWGLGGFCPGPAISAATTGTSHAVATAV-ALAAGM 339
BLAST of jgi.p|Trimin1|174279 vs. uniprot
Match: A0A6V1PAC3_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PAC3_HETAK) HSP 1 Score: 172 bits (435), Expect = 3.660e-46 Identity = 139/380 (36.58%), Postives = 183/380 (48.16%), Query Frame = 1
Query: 7 PATEWTLQQSLAGGIVLGSSTALMMVLKGRIAGLSGIFATITQPLDDSWHWKAAFTAGFAGASAAIAIWYPGAFITEVGYSRVRYALA--GALVGFGARLGNGCTSGHGICGLARLSRRSLVAVLTFMTAAAAVATSLE-LNGALTTLPPGPADQPGAPSGAAAXXXXXXXAAQRCYAKRDI---TSLFVSVPLGALFAAGLALAGMGNRGKVLGFLVPRIGGGDGGGAWDPSLALVMGGAIPVAALGFAF--TKRRTPLLGGAKC-----------------PPPPSD--------------------------------IDLPLVLGAWIFGAGWGAAGLCPGPAVLLAAAGVRNVWAYFVPAMAAGMAGAKAVNAAL 975
P TE T S AGG++L ST M++ G++ GLSGI + + WKAAFTA F + +A +P + + ++ Y + G LVG+G RLGNGCTSGHGICGLARLS RS+ AV+TF+TAA A A +L + GA + DQP + AA A + L + ALFAAGL +AGMG R K+L FLV R G WD SL ++G A+ + + F + PLL + P PS +DLPL+LGAW+FG GWG G+CPGPA+LL AAG V ++PA+ GMA A+A L
Sbjct: 7 PITEPTPLLSSAGGVMLAISTITMLMFNGKLLGLSGIAEGLLFYDKTDFKWKAAFTASFMAMAQIVAKVWP-SLLDQLNLGSPWYIMTFGGFLVGYGTRLGNGCTSGHGICGLARLSSRSIAAVVTFLTAAIATARTLHGMPGAHISADSW--DQPSVTAFYAASGGLLALFALATVGPGEAHRPARLLCTAAAAALFAAGLCVAGMGRRAKILNFLVLRREG------WDYSLLFILGFAVVICFIAFRLILSSLDRPLLCNLRVELEKNSVMTDEDVNTNMPLSPSSSVKQVVTKASRSTHVSLGSFDGCTFGIPKNTALDLPLILGAWLFGIGWGLCGICPGPAMLLVAAGYPKVSLMYLPALYVGMAAARATKTLL 377
BLAST of jgi.p|Trimin1|174279 vs. uniprot
Match: A0A6H5JNH2_9PHAE (Sulf_transp domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JNH2_9PHAE) HSP 1 Score: 166 bits (419), Expect = 1.730e-44 Identity = 130/340 (38.24%), Postives = 172/340 (50.59%), Query Frame = 1
Query: 43 GGIVLGSSTALMMVLKGRIAGLSGIFATITQPLDDSWHWKAAFTAGFAGASAAIAIWYPGAFITEVG---YSRVRYALAGALVGFGARLGNGCTSGHGICGLARLSRRSLVAVLTFMTAA-AAVATSLELN-----GALTTLPPGPADQPGAPSGAAAXXXXXXXAAQRCYAKRDITSLFVSVPLGALFAAGLALAGMGNRGKVLGFLVPRIGGGDGGGAWDPSLALVMGGAIPVAALGFAFTKR-------RTP--------LLGGAKCP-----PPPSDIDLPLVLGAWIFGAGWGAAGLCPGPAVLLAAAGVRNVWAYFVPAMAAGMAGAKAVNAAL 975
GG +LG +T +M+ G++AGLSGIF + WK F +GF I YP A + + G S +R+A+AG LVG G RLG+GCTSGHG+CGL RLSRRS+VA LTF+T+ AA + S N GA+ P S AAA +R + + S G FA GL ++GM R KV+ FL R +WDPSL V+G + V +GF R R P L GA P +++D+PLVLG W+FG GWG GLCPGPAV+ A G+ + F+P++ GM A + AL
Sbjct: 13 GGAILGITTTVMLAATGKLAGLSGIFDGVFSRTPGR-GWKVLFLSGFIVGGVVAGIVYP-AGLDQTGAPALSLLRFAVAGFLVGLGTRLGSGCTSGHGLCGLPRLSRRSIVATLTFLTSGIAAASVSAAWNDSASGGAVLETHETPMLAARYASLAAAAVGTLLTLTKR-EERAQWKAHLASFLCGGSFAGGLVISGMTQRAKVVNFLALRRN------SWDPSLMFVLGVGVMVGLVGFPLVTRSLGAPLCRLPAKAEEEQSLATGAPLAEKFEIPTGTELDVPLVLGGWLFGIGWGMGGLCPGPAVVAATFGLPGPFLAFMPSLVVGMKAAGRLKGAL 343
BLAST of jgi.p|Trimin1|174279 vs. uniprot
Match: A0A2P6TJL1_CHLSO (3-phosphoshikimate 1-carboxyvinyltransferase n=3 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TJL1_CHLSO) HSP 1 Score: 168 bits (425), Expect = 1.500e-42 Identity = 130/327 (39.76%), Postives = 163/327 (49.85%), Query Frame = 1
Query: 16 EWTLQQSLAGGIVLGSSTALMMVLKGRIAGLSGIFATITQPLDDSWH--WKAAFTAGFAGASAAIAIWYP-GAFITEVGYSRVRYALAGALVGFGARLGNGCTSGHGICGLARLSRRSLVAVLTFMT---AAAAVATSLELNG---------ALTTLPPGPADQPGAPSGAAAXXXXXXXAAQRCYAKRDITSLFVSVPLGALFAAGLALAGMGNRGKVLGFLVPRIGGGDGGGAWDPSLALVMGGAIPVAALGFAFTKRRT--PLLGGAKCPPPPSDIDLPLVLGAWIFGAGWGAAGLCPGPAVLLAAAGVRNVWAYFVPAMAAGM 945
+T S AGG ++G + A + L GRI G+SGI + + +W W+ AF G A + A A YP G F YS R A G LVG G LG+GCTSGHG+CG+ARL+ RSL A TFM A AA+A SL G AL T P AA A + + + GA+FAAGLAL+GM KV+GFL P + AWDPSL VMG A+ + F + KRR PL A P S ID PL++G+ +FGAGW AG+CPGPA++ A AM AGM
Sbjct: 895 HFTPDASAAGGALIGLAAASKLGLTGRILGVSGIVGGLVR---GAWSEGWRYAFLGGLAAGALASASVYPEGFFHFPESYSLARAAAGGLLVGVGTSLGSGCTSGHGVCGIARLAPRSLAATGTFMASGVATAALAGSLAATGVDPAATTPLALMTTQQWQVAAPLLGGSLAAVALLRGAATHSAPSSKPLLGQAAEFASGAIFAAGLALSGMCQPSKVVGFLSPLVP------AWDPSLMFVMGSALAITVPTFQYLKRRGTGPLCSAAFALPTKSAIDKPLLVGSGLFGAGWAVAGVCPGPALVAAIGAPGPESLTIAGAMVAGM 1212
BLAST of jgi.p|Trimin1|174279 vs. uniprot
Match: A0A0D2LMA2_9CHLO (Sulf_transp domain-containing protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2LMA2_9CHLO) HSP 1 Score: 159 bits (403), Expect = 2.140e-42 Identity = 141/333 (42.34%), Postives = 162/333 (48.65%), Query Frame = 1
Query: 16 EWTLQQSLAGGIVLGSSTALMMVLKGRIAGLSGIFATITQPLDDSWH-WKAAFTAGFAGASAAIAIWYPGAFIT-EVGYSRVRYALAGALVGFGARLGNGCTSGHGICGLARLSRRSLVAVLTFMTAAAAVAT---SLELNGALTTLPP---GPAD---QPGAPSGAAAXXXXXXXAAQRC---YAKRDITSLFVSVPLGALFAAGLALAGMGNRGKVLGFLVPRIGGGDGGGAWDPSLALVMGGAIPVAALGFAFTKRRT-----PLLGGAKCPPPPSDIDLPLVLGAWIFGAGWGAAGLCPGPA-VLLAAAGVR--NVWAYFVPAMAAGMA 948
++T LAGG VLG + V+ GR+ G+SG I L W W+ AF G A+ P AF T Y+ R AL G LVG GA +GNGCTSGHGICG ARLS RS LTFM A A AT + + G L P P+D GA AAA A R SL + G LFA GL GM KV FL P AWDP+L VMGGA+ VA GF + KR PL G A P ID L+LG +FGAGWG +G+CPGPA V L A GV V AY AM AGMA
Sbjct: 2 QFTPLVGLAGGAVLGLAAFGKYVINGRVLGISG---GIKGWLTGDWRSWRVAFNGGLLAAAMVAGFITPAAFDTLPASYTVERAALGGLLVGLGASVGNGCTSGHGICGNARLSARSFAYTLTFMAAGVAAATLSGTAQALGILAQTAPLVWWPSDVVINQGAMLVAAAILGVAGCGALAKGIEAGSRKAVSLLTELVAGGLFAFGLTYTGMVRPTKVAAFLSPLYP------AWDPTLMCVMGGALLVALPGFQWVKRARSAPPKPLAGDAYLEPAAKAIDARLLLGGLLFGAGWGLSGMCPGPALVALVATGVPPPQVAAY-CGAMVAGMA 324
BLAST of jgi.p|Trimin1|174279 vs. uniprot
Match: A0A835WLH7_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835WLH7_9CHLO) HSP 1 Score: 160 bits (404), Expect = 6.430e-42 Identity = 124/325 (38.15%), Postives = 161/325 (49.54%), Query Frame = 1
Query: 43 GGIVLGSSTALMMVLKGRIAGLSGIFATITQPLDDSWHWKAAFTAGFAGASAAIAIWYPGAFITEVG-YSRVRYALAGALVGFGARLGNGCTSGHGICGLARLSRRSLVAVLTFMTAAAAVATSLELNGALTTLP-------PGPADQPGAPSGAAAXXXXXXXAAQRCYAKRDITSLFVSVP------------LGALFAAGLALAGMGNRGKVLGFLVPRIGGGDGGGAWDPSLALVMGGAIPVAALGFA----FTKRRTPLLGGAKCPPPPSDIDLPLVLGAWIFGAGWGAAGLCPGPAVLLAAAGVRNVWAYFVPAMAAGM 945
GG+VLG +TA+ +V GR+ G+SG + ++ W+ AF G + ++ +P AF G + R +LAG LVG GA +GNGCTSGHGICG ARLS RS TFM A A AT A+ P P A+ A + A A A R +S + P G LFA GL ++GM + KV GFL + +WD SL VMGGA+ VAA+ F F PL C P S ID L+ G +FGAGWG AG+CPGPA++ A G +V AY + +MA GM
Sbjct: 20 GGLVLGVATAIKVVATGRVLGISGAVKGLVN--GEAAPWRFAFLGGMLAGAIVLSSIFPAAFEMIPGSFPLWRASLAGLLVGLGAAMGNGCTSGHGICGSARLSTRSFAYTGTFMAAGMATATLTNTAAAMNVAPVAAAFAGPAAAEMQLALTAAVGGLAAFAALASAXRAMRGSSSSSAAAPGSAPFELGSELLAGLLFAVGLGISGMTHPSKVAGFLTVGVP------SWDASLPFVMGGAVLVAAIAFQGIQRFKMMSKPLFTPGFCIPNSSVIDGRLLTGGLLFGAGWGLAGMCPGPAIVGAVVGDPHVLAY-LGSMAGGM 335
BLAST of jgi.p|Trimin1|174279 vs. uniprot
Match: A0A0L0DU79_THETB (Integral membrane protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DU79_THETB) HSP 1 Score: 156 bits (395), Expect = 3.040e-41 Identity = 124/321 (38.63%), Postives = 164/321 (51.09%), Query Frame = 1
Query: 1 MLPATEWTLQQSLAGGIVLGSSTALMMVLKGRIAGLSGIFATITQPLD--DSWHWKAAFTAGFAGASAAIAIWYPGAF---------------ITEVGYSRVRYALAGALVGFGARLGNGCTSGHGICGLARLSRRSLVAVLTFMTAAAAVATSLELNGALTTLPPGPADQPGAPSGAA-----AXXXXXXXAAQRCYAKRDITSLFVSVPLGA---LFAAGLALAGMGNRGKVLGFLVPRIGGGDGGGAWDPSLALVMGGAIPVAALGFAFTKRRTPLLGGAKCP---PPPSDIDLPLVLGAWIFGAGWGAAGLCPGPAV 879
ML + +T SLAGG+ +G+S++L++ +G+I G+SGI P + W+ AF +G A + +A+ P F + V + YA AG LVG G ++G+GCTSGHG+CGL R S RSLVAVL+FM++AAA +L + L P P A S A A AA D T L + GA LFA+GL LAGM N KVLGFL P G WDPSLALVMGGA+ + F R + P P SD++ L+ G+ +FG GW AG CPGPA+
Sbjct: 1 MLLSPLFTPLASLAGGLAIGASSSLLLATQGKILGVSGIAYMSASPDTHVSNRTWRLAFLSGMVAAGSGLAVLAPAVFGPALVPGALPVAPLAASGVLTANAAYAAAGFLVGLGTKIGSGCTSGHGVCGLPRWSARSLVAVLSFMSSAAA---TLAITAGLGWT--SPVAVPAAGSAVASTSPLAPAVAAVLAAAALAWPADATPLANKLMAGAWGMLFASGLGLAGMLNPLKVLGFLSPSAV----AGGWDPSLALVMGGAVAFNLVAFPILTARGSTVTSPALPLDLPTSSDLNPRLIGGSVLFGLGWAIAGFCPGPAI 312
BLAST of jgi.p|Trimin1|174279 vs. uniprot
Match: C1MLY4_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MLY4_MICPC) HSP 1 Score: 155 bits (393), Expect = 5.070e-41 Identity = 119/326 (36.50%), Postives = 161/326 (49.39%), Query Frame = 1
Query: 34 SLAGGIVLGSSTALMMVLKGRIAGLSGIFATITQPLDDSWHWKAAFTAGFAGASAAIAIWYPGAFITEVGYSRVRYALAGALVGFGARLGNGCTSGHGICGLARLSRRSLVAVLTFMTAAAAVATSLELNGALTTLPPGPADQPGAPSG-----------AAAXXXXXXXAAQRCYAKR---------DITSLFVSVPLGALFAAGLALAGMGNRGKVLGFLVPRIGGGDGGGAWDPSLALVMGGAIPVAALGFAFTKRRTPLLGGAKCPPPPSD--IDLPLVLGAWIFGAGWGAAGLCPGPAVLLAAAGVRNVWAYFVPAMAAGM 945
+L GG +LG +T ++L GR+ G+SG F + + D+ W+ AF AG G+ A A P + E R +AG LVG G+ LGNGCTSGHGICG +R + RS+ + FM A AT + N AL P D+ PS AAA R +AK+ D L V G +F GL+++GM KV GFL +WDPSL LVMGGA+ +A FA ++ T + PP + ID L+LG +FGAGWG AG+CPGPA++ AA ++ A+ GM
Sbjct: 12 ALIGGAILGVATVGKLLLTGRVLGISGSFKGLVT-IGDTSRWRFAFLAGLVGSGLADAYMNPDQ-VAEPSAGLTRTVVAGLLVGAGSGLGNGCTSGHGICGNSRFAPRSMAYTVLFMATGFAAATLFDTNAALGVNPASALDRMKLPSAEEMIGYGNIIAAAAASFLGLGQLARAHAKKNDGEHTDFHDTLGLVAEVISGFVFGLGLSISGMRRAAKVSGFLSATAS------SWDPSLMLVMGGAMGLAIPAFARSESETKPHCAREFSVPPKNRGIDKNLLLGGVMFGAGWGLAGMCPGPAIVSFAANPTGTVGAWLLAVVVGM 329 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|174279 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_15500 ID=mRNA_15500|Name=jgi.p|Trimin1|174279|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1041bp|location=Sequence derived from alignment at Contig_112:19226..21363+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGCTGCCGGCGACTGAATGGACTCTGCAGCAGAGCTTGGCGGGAGGCATback to top protein sequence of jgi.p|Trimin1|174279 >Trimin1|174279|e_gw1.112.50.1 ID=Trimin1|174279|e_gw1.112.50.1|Name=jgi.p|Trimin1|174279|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=347bp MLPATEWTLQQSLAGGIVLGSSTALMMVLKGRIAGLSGIFATITQPLDDSback to top mRNA from alignment at Contig_112:19226..21363+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_15500 ID=mRNA_15500|Name=jgi.p|Trimin1|174279|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2138bp|location=Sequence derived from alignment at Contig_112:19226..21363+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_112:19226..21363+ >mRNA_15500 ID=mRNA_15500|Name=jgi.p|Trimin1|174279|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1041bp|location=Sequence derived from alignment at Contig_112:19226..21363+ (Tribonema minus UTEX_B_3156 )back to top |