mRNA_15500 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|174279
Unique NamemRNA_15500
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|174279 vs. uniprot
Match: A0A835ZGA3_9STRA (Sulf_transp domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGA3_9STRA)

HSP 1 Score: 615 bits (1585), Expect = 4.240e-221
Identity = 346/346 (100.00%), Postives = 346/346 (100.00%), Query Frame = 1
Query:    1 MLPATEWTLQQSLAGGIVLGSSTALMMVLKGRIAGLSGIFATITQPLDDSWHWKAAFTAGFAGASAAIAIWYPGAFITEVGYSRVRYALAGALVGFGARLGNGCTSGHGICGLARLSRRSLVAVLTFMTAAAAVATSLELNGALTTLPPGPADQPGAPSGAAAXXXXXXXAAQRCYAKRDITSLFVSVPLGALFAAGLALAGMGNRGKVLGFLVPRIGGGDGGGAWDPSLALVMGGAIPVAALGFAFTKRRTPLLGGAKCPPPPSDIDLPLVLGAWIFGAGWGAAGLCPGPAVLLAAAGVRNVWAYFVPAMAAGMAGAKAVNAALARXXXXXXXXXXXXXSDSKQH 1038
            MLPATEWTLQQSLAGGIVLGSSTALMMVLKGRIAGLSGIFATITQPLDDSWHWKAAFTAGFAGASAAIAIWYPGAFITEVGYSRVRYALAGALVGFGARLGNGCTSGHGICGLARLSRRSLVAVLTFMTAAAAVATSLELNGALTTLPPGPADQPGAPSGAAAXXXXXXXAAQRCYAKRDITSLFVSVPLGALFAAGLALAGMGNRGKVLGFLVPRIGGGDGGGAWDPSLALVMGGAIPVAALGFAFTKRRTPLLGGAKCPPPPSDIDLPLVLGAWIFGAGWGAAGLCPGPAVLLAAAGVRNVWAYFVPAMAAGMAGAKAVNAALARXXXXXXXXXXXXXSDSKQH
Sbjct:    1 MLPATEWTLQQSLAGGIVLGSSTALMMVLKGRIAGLSGIFATITQPLDDSWHWKAAFTAGFAGASAAIAIWYPGAFITEVGYSRVRYALAGALVGFGARLGNGCTSGHGICGLARLSRRSLVAVLTFMTAAAAVATSLELNGALTTLPPGPADQPGAPSGAAAXXXXXXXAAQRCYAKRDITSLFVSVPLGALFAAGLALAGMGNRGKVLGFLVPRIGGGDGGGAWDPSLALVMGGAIPVAALGFAFTKRRTPLLGGAKCPPPPSDIDLPLVLGAWIFGAGWGAAGLCPGPAVLLAAAGVRNVWAYFVPAMAAGMAGAKAVNAALARXXXXXXXXXXXXXSDSKQH 346          
BLAST of jgi.p|Trimin1|174279 vs. uniprot
Match: A0A8J5XUX3_DIALT (Sulf_transp domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XUX3_DIALT)

HSP 1 Score: 179 bits (453), Expect = 3.140e-49
Identity = 141/329 (42.86%), Postives = 182/329 (55.32%), Query Frame = 1
Query:   37 LAGGIVLGSSTALMMVLKGRIAGLSGIFATITQPL--DDSWHWKAAFTAGFAGASAAIAIWYPGAFITEV-GYSRVRYALAGALVGFGARLGNGCTSGHGICGLARLSRRSLVAVLTFMTAAAAVATS---LELNGALTTLPPGPADQPGAPSGAAAXXXXXXXAA-----------QRCYAKRDITSLFVSVPLGALFAAGLALAGMGNRGKVLGFLVPRIGGGDGGGAWDPSLALVMGGAIPVAALGFAFTKRRT-PLLGGAKCPPPPSDIDLPLVLGAWIFGAGWGAAGLCPGPAVLLAAAGVRNVWAYFVPAMAAGMAGAKAVNA 969
            L GG  L  + +  ++L+GRI G+SGI A ++ P    +  HW+ AF AG   ASA +A   P AF  +    S +   +AGALVG G +LG+GCTSGHG+CGL R SRRSLVAV TFM      A++   L L  ALTT    PA    A SGA A XXXXX A            +   A R+     +S  LGALFA GL+++GM    +VLGFL P    G     WDP+LA V+GGA+ V    F    RR+ PLL  A   P   D+   L++G+  FG GWG AG+CPGPA+++  AG + V   FV A+    A  +A  A
Sbjct:   24 LLGGACLALAASAHLLLRGRITGISGICAALSSPFLAPEKRHWRVAFLAGMGVASALVARLLPEAFAADAQDPSPLAAFVAGALVGAGTKLGSGCTSGHGVCGLPRFSRRSLVAVCTFMAVGVITASTIGALGLRPALTT----PAPPSAALSGAVAAXXXXXLAVLIGGRTPAANGKDELAPREHVDAALSAGLGALFAVGLSVSGMARPSRVLGFLDPFSRAG-----WDPTLACVLGGALAVNVCTFGLILRRSRPLLARAFELPTARDVTPSLLVGSATFGLGWGLAGVCPGPAIVILGAG-KPVAVAFVAALLGAQAATEAAQA 342          
BLAST of jgi.p|Trimin1|174279 vs. uniprot
Match: A0A5A8DR13_CAFRO (Sulf_transp domain-containing protein n=5 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DR13_CAFRO)

HSP 1 Score: 173 bits (438), Expect = 1.900e-47
Identity = 140/348 (40.23%), Postives = 188/348 (54.02%), Query Frame = 1
Query:    1 MLPATEWTLQQSLAGGIVLGSSTALMMVLKGRIAGLSGIFA--TITQPLDDSWHWKAAFTAGFAGASAAIAIWYPGAFITEVGYSRVRYALAGALVGFGARLGNGCTSGHGICGLARLSRRSLVAVLTFMTAAAAVATSLELNGALTTLPPGPADQ-----PG---AP--SGAAAXXXXXXX-----------AAQRCYAKRDIT--SLFVSVP-------LGALFAAGLALAGMGNRGKVLGFLVPRIGGGDGGGAWDPSLALVMGGAIPVAALGFAF-TKRRTPLLGGAKCPPPPSDIDLPLVLGAWIFGAGWGAAGLCPGPAVLLAAAGVRNVWAYFVPAMAAGM 945
            M+ ++ +T   S  GG+++G+S A  M+  GRI G+SGI +    T  LD +W  KAAF  G   ++AA  +++P  F T +  +    A AG LVGFG ++G+GCTSGHG+CG+ARLS RS VAV TFM+ A A A++++   AL  L  G   Q     PG   AP  +G A                   AA++  A   +T  SL  SVP       +GA FA GL ++GM N   +LGFL P    G     W+P+LA+VMGGA+ V  + F      + PLLG     P   DI   LVLG+ +FG GWG  G CPGPA+  A  G  +  A  V A+AAGM
Sbjct:    1 MMISSAFTPMASGIGGVIIGTSAAANMLGNGRITGISGILSGTLFTSGLDSAW--KAAFLGGMLSSAAAQTVYFPEYFGT-LKINPAMSAAAGLLVGFGTQMGSGCTSGHGVCGMARLSARSWVAVATFMSTAIATASTVQAVPALKELVFGAEGQEFFVIPGSEYAPLVAGIAGVGLLVEAIFSRASESNLHAAKKEEADSKVTHASLTASVPAIGLSWAIGATFAFGLGMSGMLNPAIILGFLTPTSAEG-----WNPNLAMVMGGAVAVTGIAFPLIVNNKAPLLGDRWHLPTAKDITPGLVLGSAMFGVGWGLGGFCPGPAISAATTGTSHAVATAV-ALAAGM 339          
BLAST of jgi.p|Trimin1|174279 vs. uniprot
Match: A0A6V1PAC3_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PAC3_HETAK)

HSP 1 Score: 172 bits (435), Expect = 3.660e-46
Identity = 139/380 (36.58%), Postives = 183/380 (48.16%), Query Frame = 1
Query:    7 PATEWTLQQSLAGGIVLGSSTALMMVLKGRIAGLSGIFATITQPLDDSWHWKAAFTAGFAGASAAIAIWYPGAFITEVGYSRVRYALA--GALVGFGARLGNGCTSGHGICGLARLSRRSLVAVLTFMTAAAAVATSLE-LNGALTTLPPGPADQPGAPSGAAAXXXXXXXAAQRCYAKRDI---TSLFVSVPLGALFAAGLALAGMGNRGKVLGFLVPRIGGGDGGGAWDPSLALVMGGAIPVAALGFAF--TKRRTPLLGGAKC-----------------PPPPSD--------------------------------IDLPLVLGAWIFGAGWGAAGLCPGPAVLLAAAGVRNVWAYFVPAMAAGMAGAKAVNAAL 975
            P TE T   S AGG++L  ST  M++  G++ GLSGI   +       + WKAAFTA F   +  +A  +P + + ++      Y +   G LVG+G RLGNGCTSGHGICGLARLS RS+ AV+TF+TAA A A +L  + GA  +      DQP   +  AA        A       +      L  +    ALFAAGL +AGMG R K+L FLV R  G      WD SL  ++G A+ +  + F    +    PLL   +                  P  PS                                 +DLPL+LGAW+FG GWG  G+CPGPA+LL AAG   V   ++PA+  GMA A+A    L
Sbjct:    7 PITEPTPLLSSAGGVMLAISTITMLMFNGKLLGLSGIAEGLLFYDKTDFKWKAAFTASFMAMAQIVAKVWP-SLLDQLNLGSPWYIMTFGGFLVGYGTRLGNGCTSGHGICGLARLSSRSIAAVVTFLTAAIATARTLHGMPGAHISADSW--DQPSVTAFYAASGGLLALFALATVGPGEAHRPARLLCTAAAAALFAAGLCVAGMGRRAKILNFLVLRREG------WDYSLLFILGFAVVICFIAFRLILSSLDRPLLCNLRVELEKNSVMTDEDVNTNMPLSPSSSVKQVVTKASRSTHVSLGSFDGCTFGIPKNTALDLPLILGAWLFGIGWGLCGICPGPAMLLVAAGYPKVSLMYLPALYVGMAAARATKTLL 377          
BLAST of jgi.p|Trimin1|174279 vs. uniprot
Match: A0A6H5JNH2_9PHAE (Sulf_transp domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JNH2_9PHAE)

HSP 1 Score: 166 bits (419), Expect = 1.730e-44
Identity = 130/340 (38.24%), Postives = 172/340 (50.59%), Query Frame = 1
Query:   43 GGIVLGSSTALMMVLKGRIAGLSGIFATITQPLDDSWHWKAAFTAGFAGASAAIAIWYPGAFITEVG---YSRVRYALAGALVGFGARLGNGCTSGHGICGLARLSRRSLVAVLTFMTAA-AAVATSLELN-----GALTTLPPGPADQPGAPSGAAAXXXXXXXAAQRCYAKRDITSLFVSVPLGALFAAGLALAGMGNRGKVLGFLVPRIGGGDGGGAWDPSLALVMGGAIPVAALGFAFTKR-------RTP--------LLGGAKCP-----PPPSDIDLPLVLGAWIFGAGWGAAGLCPGPAVLLAAAGVRNVWAYFVPAMAAGMAGAKAVNAAL 975
            GG +LG +T +M+   G++AGLSGIF  +         WK  F +GF        I YP A + + G    S +R+A+AG LVG G RLG+GCTSGHG+CGL RLSRRS+VA LTF+T+  AA + S   N     GA+      P       S AAA         +R   +    +   S   G  FA GL ++GM  R KV+ FL  R        +WDPSL  V+G  + V  +GF    R       R P        L  GA        P  +++D+PLVLG W+FG GWG  GLCPGPAV+ A  G+   +  F+P++  GM  A  +  AL
Sbjct:   13 GGAILGITTTVMLAATGKLAGLSGIFDGVFSRTPGR-GWKVLFLSGFIVGGVVAGIVYP-AGLDQTGAPALSLLRFAVAGFLVGLGTRLGSGCTSGHGLCGLPRLSRRSIVATLTFLTSGIAAASVSAAWNDSASGGAVLETHETPMLAARYASLAAAAVGTLLTLTKR-EERAQWKAHLASFLCGGSFAGGLVISGMTQRAKVVNFLALRRN------SWDPSLMFVLGVGVMVGLVGFPLVTRSLGAPLCRLPAKAEEEQSLATGAPLAEKFEIPTGTELDVPLVLGGWLFGIGWGMGGLCPGPAVVAATFGLPGPFLAFMPSLVVGMKAAGRLKGAL 343          
BLAST of jgi.p|Trimin1|174279 vs. uniprot
Match: A0A2P6TJL1_CHLSO (3-phosphoshikimate 1-carboxyvinyltransferase n=3 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TJL1_CHLSO)

HSP 1 Score: 168 bits (425), Expect = 1.500e-42
Identity = 130/327 (39.76%), Postives = 163/327 (49.85%), Query Frame = 1
Query:   16 EWTLQQSLAGGIVLGSSTALMMVLKGRIAGLSGIFATITQPLDDSWH--WKAAFTAGFAGASAAIAIWYP-GAFITEVGYSRVRYALAGALVGFGARLGNGCTSGHGICGLARLSRRSLVAVLTFMT---AAAAVATSLELNG---------ALTTLPPGPADQPGAPSGAAAXXXXXXXAAQRCYAKRDITSLFVSVPLGALFAAGLALAGMGNRGKVLGFLVPRIGGGDGGGAWDPSLALVMGGAIPVAALGFAFTKRRT--PLLGGAKCPPPPSDIDLPLVLGAWIFGAGWGAAGLCPGPAVLLAAAGVRNVWAYFVPAMAAGM 945
             +T   S AGG ++G + A  + L GRI G+SGI   + +    +W   W+ AF  G A  + A A  YP G F     YS  R A  G LVG G  LG+GCTSGHG+CG+ARL+ RSL A  TFM    A AA+A SL   G         AL T        P      AA       A     + + +         GA+FAAGLAL+GM    KV+GFL P +       AWDPSL  VMG A+ +    F + KRR   PL   A   P  S ID PL++G+ +FGAGW  AG+CPGPA++ A             AM AGM
Sbjct:  895 HFTPDASAAGGALIGLAAASKLGLTGRILGVSGIVGGLVR---GAWSEGWRYAFLGGLAAGALASASVYPEGFFHFPESYSLARAAAGGLLVGVGTSLGSGCTSGHGVCGIARLAPRSLAATGTFMASGVATAALAGSLAATGVDPAATTPLALMTTQQWQVAAPLLGGSLAAVALLRGAATHSAPSSKPLLGQAAEFASGAIFAAGLALSGMCQPSKVVGFLSPLVP------AWDPSLMFVMGSALAITVPTFQYLKRRGTGPLCSAAFALPTKSAIDKPLLVGSGLFGAGWAVAGVCPGPALVAAIGAPGPESLTIAGAMVAGM 1212          
BLAST of jgi.p|Trimin1|174279 vs. uniprot
Match: A0A0D2LMA2_9CHLO (Sulf_transp domain-containing protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2LMA2_9CHLO)

HSP 1 Score: 159 bits (403), Expect = 2.140e-42
Identity = 141/333 (42.34%), Postives = 162/333 (48.65%), Query Frame = 1
Query:   16 EWTLQQSLAGGIVLGSSTALMMVLKGRIAGLSGIFATITQPLDDSWH-WKAAFTAGFAGASAAIAIWYPGAFIT-EVGYSRVRYALAGALVGFGARLGNGCTSGHGICGLARLSRRSLVAVLTFMTAAAAVAT---SLELNGALTTLPP---GPAD---QPGAPSGAAAXXXXXXXAAQRC---YAKRDITSLFVSVPLGALFAAGLALAGMGNRGKVLGFLVPRIGGGDGGGAWDPSLALVMGGAIPVAALGFAFTKRRT-----PLLGGAKCPPPPSDIDLPLVLGAWIFGAGWGAAGLCPGPA-VLLAAAGVR--NVWAYFVPAMAAGMA 948
            ++T    LAGG VLG +     V+ GR+ G+SG    I   L   W  W+ AF  G   A+       P AF T    Y+  R AL G LVG GA +GNGCTSGHGICG ARLS RS    LTFM A  A AT   + +  G L    P    P+D     GA   AAA        A         R   SL   +  G LFA GL   GM    KV  FL P         AWDP+L  VMGGA+ VA  GF + KR       PL G A   P    ID  L+LG  +FGAGWG +G+CPGPA V L A GV    V AY   AM AGMA
Sbjct:    2 QFTPLVGLAGGAVLGLAAFGKYVINGRVLGISG---GIKGWLTGDWRSWRVAFNGGLLAAAMVAGFITPAAFDTLPASYTVERAALGGLLVGLGASVGNGCTSGHGICGNARLSARSFAYTLTFMAAGVAAATLSGTAQALGILAQTAPLVWWPSDVVINQGAMLVAAAILGVAGCGALAKGIEAGSRKAVSLLTELVAGGLFAFGLTYTGMVRPTKVAAFLSPLYP------AWDPTLMCVMGGALLVALPGFQWVKRARSAPPKPLAGDAYLEPAAKAIDARLLLGGLLFGAGWGLSGMCPGPALVALVATGVPPPQVAAY-CGAMVAGMA 324          
BLAST of jgi.p|Trimin1|174279 vs. uniprot
Match: A0A835WLH7_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835WLH7_9CHLO)

HSP 1 Score: 160 bits (404), Expect = 6.430e-42
Identity = 124/325 (38.15%), Postives = 161/325 (49.54%), Query Frame = 1
Query:   43 GGIVLGSSTALMMVLKGRIAGLSGIFATITQPLDDSWHWKAAFTAGFAGASAAIAIWYPGAFITEVG-YSRVRYALAGALVGFGARLGNGCTSGHGICGLARLSRRSLVAVLTFMTAAAAVATSLELNGALTTLP-------PGPADQPGAPSGAAAXXXXXXXAAQRCYAKRDITSLFVSVP------------LGALFAAGLALAGMGNRGKVLGFLVPRIGGGDGGGAWDPSLALVMGGAIPVAALGFA----FTKRRTPLLGGAKCPPPPSDIDLPLVLGAWIFGAGWGAAGLCPGPAVLLAAAGVRNVWAYFVPAMAAGM 945
            GG+VLG +TA+ +V  GR+ G+SG    +     ++  W+ AF  G    +  ++  +P AF    G +   R +LAG LVG GA +GNGCTSGHGICG ARLS RS     TFM A  A AT      A+   P       P  A+   A + A          A    A R  +S   + P             G LFA GL ++GM +  KV GFL   +       +WD SL  VMGGA+ VAA+ F     F     PL     C P  S ID  L+ G  +FGAGWG AG+CPGPA++ A  G  +V AY + +MA GM
Sbjct:   20 GGLVLGVATAIKVVATGRVLGISGAVKGLVN--GEAAPWRFAFLGGMLAGAIVLSSIFPAAFEMIPGSFPLWRASLAGLLVGLGAAMGNGCTSGHGICGSARLSTRSFAYTGTFMAAGMATATLTNTAAAMNVAPVAAAFAGPAAAEMQLALTAAVGGLAAFAALASAXRAMRGSSSSSAAAPGSAPFELGSELLAGLLFAVGLGISGMTHPSKVAGFLTVGVP------SWDASLPFVMGGAVLVAAIAFQGIQRFKMMSKPLFTPGFCIPNSSVIDGRLLTGGLLFGAGWGLAGMCPGPAIVGAVVGDPHVLAY-LGSMAGGM 335          
BLAST of jgi.p|Trimin1|174279 vs. uniprot
Match: A0A0L0DU79_THETB (Integral membrane protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DU79_THETB)

HSP 1 Score: 156 bits (395), Expect = 3.040e-41
Identity = 124/321 (38.63%), Postives = 164/321 (51.09%), Query Frame = 1
Query:    1 MLPATEWTLQQSLAGGIVLGSSTALMMVLKGRIAGLSGIFATITQPLD--DSWHWKAAFTAGFAGASAAIAIWYPGAF---------------ITEVGYSRVRYALAGALVGFGARLGNGCTSGHGICGLARLSRRSLVAVLTFMTAAAAVATSLELNGALTTLPPGPADQPGAPSGAA-----AXXXXXXXAAQRCYAKRDITSLFVSVPLGA---LFAAGLALAGMGNRGKVLGFLVPRIGGGDGGGAWDPSLALVMGGAIPVAALGFAFTKRRTPLLGGAKCP---PPPSDIDLPLVLGAWIFGAGWGAAGLCPGPAV 879
            ML +  +T   SLAGG+ +G+S++L++  +G+I G+SGI      P     +  W+ AF +G   A + +A+  P  F                + V  +   YA AG LVG G ++G+GCTSGHG+CGL R S RSLVAVL+FM++AAA   +L +   L      P   P A S  A     A       AA       D T L   +  GA   LFA+GL LAGM N  KVLGFL P        G WDPSLALVMGGA+    + F     R   +     P   P  SD++  L+ G+ +FG GW  AG CPGPA+
Sbjct:    1 MLLSPLFTPLASLAGGLAIGASSSLLLATQGKILGVSGIAYMSASPDTHVSNRTWRLAFLSGMVAAGSGLAVLAPAVFGPALVPGALPVAPLAASGVLTANAAYAAAGFLVGLGTKIGSGCTSGHGVCGLPRWSARSLVAVLSFMSSAAA---TLAITAGLGWT--SPVAVPAAGSAVASTSPLAPAVAAVLAAAALAWPADATPLANKLMAGAWGMLFASGLGLAGMLNPLKVLGFLSPSAV----AGGWDPSLALVMGGAVAFNLVAFPILTARGSTVTSPALPLDLPTSSDLNPRLIGGSVLFGLGWAIAGFCPGPAI 312          
BLAST of jgi.p|Trimin1|174279 vs. uniprot
Match: C1MLY4_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MLY4_MICPC)

HSP 1 Score: 155 bits (393), Expect = 5.070e-41
Identity = 119/326 (36.50%), Postives = 161/326 (49.39%), Query Frame = 1
Query:   34 SLAGGIVLGSSTALMMVLKGRIAGLSGIFATITQPLDDSWHWKAAFTAGFAGASAAIAIWYPGAFITEVGYSRVRYALAGALVGFGARLGNGCTSGHGICGLARLSRRSLVAVLTFMTAAAAVATSLELNGALTTLPPGPADQPGAPSG-----------AAAXXXXXXXAAQRCYAKR---------DITSLFVSVPLGALFAAGLALAGMGNRGKVLGFLVPRIGGGDGGGAWDPSLALVMGGAIPVAALGFAFTKRRTPLLGGAKCPPPPSD--IDLPLVLGAWIFGAGWGAAGLCPGPAVLLAAAGVRNVWAYFVPAMAAGM 945
            +L GG +LG +T   ++L GR+ G+SG F  +   + D+  W+ AF AG  G+  A A   P   + E      R  +AG LVG G+ LGNGCTSGHGICG +R + RS+   + FM    A AT  + N AL   P    D+   PS            AAA          R +AK+         D   L   V  G +F  GL+++GM    KV GFL           +WDPSL LVMGGA+ +A   FA ++  T      +   PP +  ID  L+LG  +FGAGWG AG+CPGPA++  AA        ++ A+  GM
Sbjct:   12 ALIGGAILGVATVGKLLLTGRVLGISGSFKGLVT-IGDTSRWRFAFLAGLVGSGLADAYMNPDQ-VAEPSAGLTRTVVAGLLVGAGSGLGNGCTSGHGICGNSRFAPRSMAYTVLFMATGFAAATLFDTNAALGVNPASALDRMKLPSAEEMIGYGNIIAAAAASFLGLGQLARAHAKKNDGEHTDFHDTLGLVAEVISGFVFGLGLSISGMRRAAKVSGFLSATAS------SWDPSLMLVMGGAMGLAIPAFARSESETKPHCAREFSVPPKNRGIDKNLLLGGVMFGAGWGLAGMCPGPAIVSFAANPTGTVGAWLLAVVVGM 329          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|174279 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZGA3_9STRA4.240e-221100.00Sulf_transp domain-containing protein n=1 Tax=Trib... [more]
A0A8J5XUX3_DIALT3.140e-4942.86Sulf_transp domain-containing protein n=1 Tax=Diac... [more]
A0A5A8DR13_CAFRO1.900e-4740.23Sulf_transp domain-containing protein n=5 Tax=Cafe... [more]
A0A6V1PAC3_HETAK3.660e-4636.58Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A6H5JNH2_9PHAE1.730e-4438.24Sulf_transp domain-containing protein n=2 Tax=Ecto... [more]
A0A2P6TJL1_CHLSO1.500e-4239.763-phosphoshikimate 1-carboxyvinyltransferase n=3 T... [more]
A0A0D2LMA2_9CHLO2.140e-4242.34Sulf_transp domain-containing protein n=1 Tax=Mono... [more]
A0A835WLH7_9CHLO6.430e-4238.15Uncharacterized protein n=1 Tax=Chlamydomonas schl... [more]
A0A0L0DU79_THETB3.040e-4138.63Integral membrane protein n=1 Tax=Thecamonas trahe... [more]
C1MLY4_MICPC5.070e-4136.50Predicted protein n=1 Tax=Micromonas pusilla (stra... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_112contigContig_112:19226..21363 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|174279|e_gw1.112.50.1
BRITEko00000
KEGG koko:K07112
Max annot lvl2759|Eukaryota
EggNOG OGsCOG2391@1|root,2S27S@2759|Eukaryota
Evalue1.1e-42
Seed ortholog2880.D7G370
Hectar predicted targeting categoryother localisation
TranscriptId174601
TrackFilteredModels1
ProteinId174279
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|174279gene_15500Tribonema minus UTEX_B_3156 geneContig_112 19226..21363 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_15500_1exon_15500_1Tribonema minus UTEX_B_3156 exonContig_112 19226..19482 +
exon_15500_2exon_15500_2Tribonema minus UTEX_B_3156 exonContig_112 20580..21363 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_15500CDS_15500Tribonema minus UTEX_B_3156 CDSContig_112 19226..19482 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|174279Trimin1|174279|e_gw1.112.50.1Tribonema minus UTEX_B_3156 polypeptideContig_112 19226..21363 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_15500 ID=mRNA_15500|Name=jgi.p|Trimin1|174279|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1041bp|location=Sequence derived from alignment at Contig_112:19226..21363+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCTGCCGGCGACTGAATGGACTCTGCAGCAGAGCTTGGCGGGAGGCAT
TGTTCTTGGTTCCAGCACAGCTCTCATGATGGTGCTCAAAGGACGCATAG
CTGGCTTGAGTGGCATCTTTGCCACCATCACGCAGCCCCTTGATGACTCC
TGGCACTGGAAGGCGGCGTTCACAGCGGGCTTCGCGGGAGCCTCCGCGGC
GATTGCTATCTGGTATCCTGGCGCCTTCATAACTGAGGTCGGCTACTCGA
GAGTCAGGTACGCGCTCGCGGGCGCCCTCGTCGGCTTCGGCGCACGCCTC
GGCAACGGCTGCACCTCGGGGCACGGCATCTGCGGCCTAGCGCGCCTGTC
ACGCCGCTCCCTCGTCGCAGTCCTCACCTTCATGACCGCCGCCGCCGCCG
TCGCGACGTCCCTCGAACTCAACGGCGCACTCACCACGCTCCCGCCGGGC
CCCGCCGACCAGCCCGGCGCTCCCTCCGGCGCCGCTGCCGCGGTGCTGCT
GGCAGCGGCGGCGGCGCAGCGCTGCTACGCGAAGCGCGACATTACTTCGC
TTTTTGTGAGCGTGCCGCTGGGGGCGCTGTTCGCGGCGGGCCTCGCGCTC
GCGGGCATGGGCAACCGCGGCAAGGTCCTCGGCTTCCTCGTGCCGCGCAT
CGGCGGCGGCGACGGCGGCGGAGCGTGGGACCCCAGTCTCGCCCTCGTCA
TGGGCGGCGCGATTCCTGTGGCGGCGCTCGGATTCGCCTTCACCAAGCGC
CGCACGCCGCTGCTCGGCGGCGCCAAGTGCCCCCCTCCCCCCTCCGATAT
CGACCTCCCCCTGGTGCTCGGCGCTTGGATTTTTGGCGCGGGGTGGGGCG
CGGCGGGGCTCTGCCCGGGGCCTGCGGTGCTGCTGGCGGCGGCGGGCGTG
CGCAACGTCTGGGCGTACTTTGTGCCGGCGATGGCGGCGGGGATGGCGGG
CGCCAAGGCCGTGAACGCGGCGCTCGCGCGGCGGCGGCAGCGCGGCGGCG
GCGGCGGCGGCGCCGGCGGCAGCGACAGCAAGCAGCACTGA
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protein sequence of jgi.p|Trimin1|174279

>Trimin1|174279|e_gw1.112.50.1 ID=Trimin1|174279|e_gw1.112.50.1|Name=jgi.p|Trimin1|174279|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=347bp
MLPATEWTLQQSLAGGIVLGSSTALMMVLKGRIAGLSGIFATITQPLDDS
WHWKAAFTAGFAGASAAIAIWYPGAFITEVGYSRVRYALAGALVGFGARL
GNGCTSGHGICGLARLSRRSLVAVLTFMTAAAAVATSLELNGALTTLPPG
PADQPGAPSGAAAAVLLAAAAAQRCYAKRDITSLFVSVPLGALFAAGLAL
AGMGNRGKVLGFLVPRIGGGDGGGAWDPSLALVMGGAIPVAALGFAFTKR
RTPLLGGAKCPPPPSDIDLPLVLGAWIFGAGWGAAGLCPGPAVLLAAAGV
RNVWAYFVPAMAAGMAGAKAVNAALARRRQRGGGGGGAGGSDSKQH*
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mRNA from alignment at Contig_112:19226..21363+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_15500 ID=mRNA_15500|Name=jgi.p|Trimin1|174279|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2138bp|location=Sequence derived from alignment at Contig_112:19226..21363+ (Tribonema minus UTEX_B_3156 )
ATGCTGCCGGCGACTGAATGGACTCTGCAGCAGAGCTTGGCGGGAGGCAT TGTTCTTGGTTCCAGCACAGCTCTCATGATGGTGCTCAAAGGACGCATAG CTGGCTTGAGTGGCATCTTTGCCACCATCACGCAGCCCCTTGATGACTCC TGGCACTGGAAGGCGGCGTTCACAGCGGGCTTCGCGGGAGCCTCCGCGGC GATTGCTATCTGGTATCCTGGCGCCTTCATAACTGAGGTCGGCTACTCGA GAGTCAGGTGCGCAAACCCAGGCAATAGCCTTATCGCCCTCCATTTTCAG TCAATGCAATGTGTACTTTTTTGAGCATACAACTCCAATATCTAGTAGCC TGAACTTGGTAATTTTGCTGTGCCAATAACAATTGGGGTGAGAAATGCGC TGCAAGCACTCCAAAAAAATTAACGTCTGCACTAGGGGAAGCGCGTGGTG TTCAAGTATTTCTTTCTAACAATGCACATGTGTGGCCGGACTGTGTGCAA AACTGACTTGATGACTCAGCGATGCTGAGCTGGCCTTATGCAGGTTTTCA TGCTTTCATACTGTTTCATCTCACTACTTTCAGCAGAGAGTTGTGTGCCG CCTCTCTCTCAAAACATGAGGTTCATGATGAAACACACGGTTTGCTATAC CTGCATGCCACATCTGCCAACGACGGACATGTGCATGATGAGAGTCGCTG TCAACTTGAGGTTATGAGAACTTGGTTCCCCTGCTTTGTGTTCACTTTCA CACCTGTTCAGTACAGAGTCTGTGTTCGGCTGCCACGGTTGCCACCTGAT TACGCTCCATGTATGCTCAGCAATTATGCTGCAAGCCCATGAAATTCATG CATGCACTGCTGTGCTCTGCAAGTGCACGCACGCTCCTGCAGCCACATTT TGAAGTTTTCATTGAAGTTGTCATTGTCTCACAACCAGCTGGGTCAGGCT ACTGTACTTCGGGCGAGTGCAGACCTAGCCCTAACCCTAAGCTGCCAGGT CTTCGCCTGGCCTACCCCCAATCCTTACCGTACACCGCACCACGCAATAA TGCACTCTCACACTGCGCCATTCCTTCCACATAACCTTGAACTTTGACTT CGACCTCACCGTTTGCCGACGCATGACAGCAGCCACACACCGCAACCTAC ACAGTCCCACAGCACGCACATCATACACCTGTGCAAGTTGAACTTCAACT ACAACGTAAATTGCAGGTACGCGCCCGCCGGCGTCCTCGTCGGCTTTGGC GCGCGCCTCGGCAACGGCTGCACCTCTCCTTATTAAATTCAACTTCAACT GACCGCCATATTTGAACTTCAACTTCAAATCAAATGCACCTTTGGAAACC GCAGGTACGCGCTCGCGGGCGCCCTCGTCGGCTTCGGCGCACGCCTCGGC AACGGCTGCACCTCGGGGCACGGCATCTGCGGCCTAGCGCGCCTGTCACG CCGCTCCCTCGTCGCAGTCCTCACCTTCATGACCGCCGCCGCCGCCGTCG CGACGTCCCTCGAACTCAACGGCGCACTCACCACGCTCCCGCCGGGCCCC GCCGACCAGCCCGGCGCTCCCTCCGGCGCCGCTGCCGCGGTGCTGCTGGC AGCGGCGGCGGCGCAGCGCTGCTACGCGAAGCGCGACATTACTTCGCTTT TTGTGAGCGTGCCGCTGGGGGCGCTGTTCGCGGCGGGCCTCGCGCTCGCG GGCATGGGCAACCGCGGCAAGGTCCTCGGCTTCCTCGTGCCGCGCATCGG CGGCGGCGACGGCGGCGGAGCGTGGGACCCCAGTCTCGCCCTCGTCATGG GCGGCGCGATTCCTGTGGCGGCGCTCGGATTCGCCTTCACCAAGCGCCGC ACGCCGCTGCTCGGCGGCGCCAAGTGCCCCCCTCCCCCCTCCGATATCGA CCTCCCCCTGGTGCTCGGCGCTTGGATTTTTGGCGCGGGGTGGGGCGCGG CGGGGCTCTGCCCGGGGCCTGCGGTGCTGCTGGCGGCGGCGGGCGTGCGC AACGTCTGGGCGTACTTTGTGCCGGCGATGGCGGCGGGGATGGCGGGCGC CAAGGCCGTGAACGCGGCGCTCGCGCGGCGGCGGCAGCGCGGCGGCGGCG GCGGCGGCGCCGGCGGCAGCGACAGCAAGCAGCACTGA
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Coding sequence (CDS) from alignment at Contig_112:19226..21363+

>mRNA_15500 ID=mRNA_15500|Name=jgi.p|Trimin1|174279|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1041bp|location=Sequence derived from alignment at Contig_112:19226..21363+ (Tribonema minus UTEX_B_3156 )
ATGCTGCCGGCGACTGAATGGACTCTGCAGCAGAGCTTGGCGGGAGGCAT
TGTTCTTGGTTCCAGCACAGCTCTCATGATGGTGCTCAAAGGACGCATAG
CTGGCTTGAGTGGCATCTTTGCCACCATCACGCAGCCCCTTGATGACTCC
TGGCACTGGAAGGCGGCGTTCACAGCGGGCTTCGCGGGAGCCTCCGCGGC
GATTGCTATCTGGTATCCTGGCGCCTTCATAACTGAGGTCGGCTACTCGA
GAGTCAGGTACGCGCTCGCGGGCGCCCTCGTCGGCTTCGGCGCACGCCTC
GGCAACGGCTGCACCTCGGGGCACGGCATCTGCGGCCTAGCGCGCCTGTC
ACGCCGCTCCCTCGTCGCAGTCCTCACCTTCATGACCGCCGCCGCCGCCG
TCGCGACGTCCCTCGAACTCAACGGCGCACTCACCACGCTCCCGCCGGGC
CCCGCCGACCAGCCCGGCGCTCCCTCCGGCGCCGCTGCCGCGGTGCTGCT
GGCAGCGGCGGCGGCGCAGCGCTGCTACGCGAAGCGCGACATTACTTCGC
TTTTTGTGAGCGTGCCGCTGGGGGCGCTGTTCGCGGCGGGCCTCGCGCTC
GCGGGCATGGGCAACCGCGGCAAGGTCCTCGGCTTCCTCGTGCCGCGCAT
CGGCGGCGGCGACGGCGGCGGAGCGTGGGACCCCAGTCTCGCCCTCGTCA
TGGGCGGCGCGATTCCTGTGGCGGCGCTCGGATTCGCCTTCACCAAGCGC
CGCACGCCGCTGCTCGGCGGCGCCAAGTGCCCCCCTCCCCCCTCCGATAT
CGACCTCCCCCTGGTGCTCGGCGCTTGGATTTTTGGCGCGGGGTGGGGCG
CGGCGGGGCTCTGCCCGGGGCCTGCGGTGCTGCTGGCGGCGGCGGGCGTG
CGCAACGTCTGGGCGTACTTTGTGCCGGCGATGGCGGCGGGGATGGCGGG
CGCCAAGGCCGTGAACGCGGCGCTCGCGCGGCGGCGGCAGCGCGGCGGCG
GCGGCGGCGGCGCCGGCGGCAGCGACAGCAAGCAGCACTGA
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