mRNA_15461 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|179117 vs. uniprot
Match: A0A835ZDN2_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDN2_9STRA) HSP 1 Score: 1000 bits (2585), Expect = 0.000e+0 Identity = 558/558 (100.00%), Postives = 558/558 (100.00%), Query Frame = 1 Query: 1 MSLDKEEESDAYTTDGPTVGRGSRKASVVATEGTTLVVRYAFGVSGPVRDNVGFVLAEDSSLEGEDHGAEYLVHPVGQQLAMYRMDDGSMQFFTGRAKNVKEIVALAISPNKRAVAVCERTDDAAAAQVSIYSVATAKRVRTLTHALRGEFTSCAFNTSSKLLAAVGGEAEAQLVVWAWEKGKVVRAGGAGGGAHHGPRVTRLHFSPDDDARLTTSGPQHLRIWYTMPDGAQKVHSLLPSGREFDALADHTWLRSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARMVAATDGEGVRDTRGASILVFDAIAAHPFLELRQMIQAHLPGSSRLETVVPCAKGFLAAGGGVASGFLSVYEATADRRAPYALVRALPTRAGALTALAVSRGGETAVAYARAGRLLALPLASVDALDESADHFVSLLPGGTHCGAVVAADVAVHKPLLATVGADRRLRVWNYLRWRCDIVHELRVEDPACVALHPSGYLVAVGFKASDDARRRRLPERIRLYHVLAAGLRPDRELSAKNVRALRFSRGGHLLAAAAGFSVCVFAA 1674 MSLDKEEESDAYTTDGPTVGRGSRKASVVATEGTTLVVRYAFGVSGPVRDNVGFVLAEDSSLEGEDHGAEYLVHPVGQQLAMYRMDDGSMQFFTGRAKNVKEIVALAISPNKRAVAVCERTDDAAAAQVSIYSVATAKRVRTLTHALRGEFTSCAFNTSSKLLAAVGGEAEAQLVVWAWEKGKVVRAGGAGGGAHHGPRVTRLHFSPDDDARLTTSGPQHLRIWYTMPDGAQKVHSLLPSGREFDALADHTWLRSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARMVAATDGEGVRDTRGASILVFDAIAAHPFLELRQMIQAHLPGSSRLETVVPCAKGFLAAGGGVASGFLSVYEATADRRAPYALVRALPTRAGALTALAVSRGGETAVAYARAGRLLALPLASVDALDESADHFVSLLPGGTHCGAVVAADVAVHKPLLATVGADRRLRVWNYLRWRCDIVHELRVEDPACVALHPSGYLVAVGFKASDDARRRRLPERIRLYHVLAAGLRPDRELSAKNVRALRFSRGGHLLAAAAGFSVCVFAA Sbjct: 1 MSLDKEEESDAYTTDGPTVGRGSRKASVVATEGTTLVVRYAFGVSGPVRDNVGFVLAEDSSLEGEDHGAEYLVHPVGQQLAMYRMDDGSMQFFTGRAKNVKEIVALAISPNKRAVAVCERTDDAAAAQVSIYSVATAKRVRTLTHALRGEFTSCAFNTSSKLLAAVGGEAEAQLVVWAWEKGKVVRAGGAGGGAHHGPRVTRLHFSPDDDARLTTSGPQHLRIWYTMPDGAQKVHSLLPSGREFDALADHTWLRSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARMVAATDGEGVRDTRGASILVFDAIAAHPFLELRQMIQAHLPGSSRLETVVPCAKGFLAAGGGVASGFLSVYEATADRRAPYALVRALPTRAGALTALAVSRGGETAVAYARAGRLLALPLASVDALDESADHFVSLLPGGTHCGAVVAADVAVHKPLLATVGADRRLRVWNYLRWRCDIVHELRVEDPACVALHPSGYLVAVGFKASDDARRRRLPERIRLYHVLAAGLRPDRELSAKNVRALRFSRGGHLLAAAAGFSVCVFAA 558
BLAST of jgi.p|Trimin1|179117 vs. uniprot
Match: D8LGN6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGN6_ECTSI) HSP 1 Score: 421 bits (1082), Expect = 9.450e-138 Identity = 234/557 (42.01%), Postives = 322/557 (57.81%), Query Frame = 1 Query: 61 RGSRKASVVATEGTTLVVRYAFGVSGPVRDNVGFVLAEDSSLEGEDHGAEYLVHPVGQQLAMYRMDDGSMQFFTGRAKNVKEIVALAISPNKRAVAVCER----TDDAAAAQVSIYSVATAKRVRTLTHALRGEFTSCAFNTSSKLLAAVGGEAEAQLVVWAWEKGKVVRAGGAGGGAHHGPRVTRLHFSPDDDARLTTSGPQHLRIWYTMPDGAQKVHSLLPSGREFDALADHTWLRSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARMVAATDGEG----------VRDTRGASILVFDAIAAHPFLELRQMIQAHLPGSSRLETVVPCAKGFLAAGGGVASGFLSVYEATADRRAPYALVRALPTRAGALTALAVSRGGETAVAYARAGRLLALPLASVDALDESADHFVSLLPGGTHCGAVVAADVAVHKPLLATVGADRRLRVWNYLRW-------RCDIVHELRVEDPACVALHPSGYLVAVGFKASDDARRRRLPERIRLYHVLAAGLRPDRELSAKNVRALRFSRGGHLLAAAAGFSVCVF 1668 +G++ + ++GT L +R+AFGV G +RDNV FV D EG YL+HPVGQQ+AM+R+DDGSM+F R +NV+EI+AL +SPNKR +AVCE+ +D +AQVS+Y VA KR+RT+ RG+F +C F+ SK L E E+ +VVW WEK KV + + G TR+ F P D TTSG QHLR+WYT D K H +LP +E DH W+ ++ RMVA TDG+ + RG+ ILVFDA A PFLEL+Q + A LP ++RLET++P +KGF+ AGGG+ +G+L VYE D R PY +++ L +L ++RG E Y+R +L L ++D LDE +HF LL GG H VVA DV + KP++ TVG DR LRVW+YL+W +C++V+E R EDP C +LHP+G+ VAVGFK +R+R+Y +L GLR R++ KN RA+ ++ GGHLLA A+GFS+ V+ Sbjct: 21 QGTKYHRTIQSDGTYLTLRHAFGVEGGIRDNVAFVTVPDPDAEGAGLMLGYLLHPVGQQVAMHRVDDGSMKFLVSRQRNVREILALCVSPNKRVIAVCEKGRTPEEDPGSAQVSVYLVANGKRIRTMLFPGRGDFITCCFSGDSKWLVTAATEPESNIVVWNWEKEKVDKTA-----QNSGSSATRVAFHPGDHGFFTTSGAQHLRLWYTSSDNVLKAHGILPQAKEQGNFTDHAWIPGTAGQP-------------------------------TRMVAITDGDDHGASXXXXXXXMNQRGSLILVFDATEASPFLELKQTLHAQLPHTARLETLMPFSKGFIVAGGGI-NGYLGVYENMEDHRDPYMWIKSFTANGSVLESLTLNRGSEVMYVYSRTNEILTFNLGNMDVLDEGINHFHPLLQGGNHTSPVVALDVCLTKPIVVTVGEDRVLRVWSYLKWGPNTQKWKCEVVYEFRNEDPNCASLHPTGFQVAVGFK-----------DRVRIYSLLMEGLRVLRDIPQKNCRAVAYANGGHLLAVASGFSLMVY 529
BLAST of jgi.p|Trimin1|179117 vs. uniprot
Match: A0A7S2QV56_9STRA (Hypothetical protein n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QV56_9STRA) HSP 1 Score: 283 bits (723), Expect = 1.420e-79 Identity = 180/532 (33.83%), Postives = 274/532 (51.50%), Query Frame = 1 Query: 94 EGTTLVVRYAFGVSGPVRDNVGFVLAEDSSLEGEDHGAEYLVHPVGQQLAMYRMDDGSMQFFTGRAKNVKEIVALAISPNKRAVAVCERTDDAA--AAQVSIYSVATAKRVRTLTHALRGE-FTSCAFNTSSKLLAAVGGEAEAQLVVWAWEKGKVVRAGGAGGGAHHGPRVTRLHFSPDDDARLTTSGPQHLRIWYTMPDGAQKVHSLLPSGREFDALADHTWLRSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARMVAATDGEGVRDT--RGASILVFDAIAAHPFLELRQMIQAHLPGSSRLETVVPCAKGFLAAGGGVASGFLSVYEATADRRAPYALVRALPTRAGALTALAVSRGGETAVAYARAGRLLALPLASVDALDESA--DHFVSLLPGGTHCGAVVAADVAVHKPLLATVGADRRLRVWNYLRWRCDIVHELRVEDPACVALHPSGYLVAVGFKASDDARRRRLPERIRLYHVLAAGLRPDRELSAKNVRALRFSRGGHLLAAAAGFSVCVF 1668 +G L +AFGV GP+RDNV F+ AE++ G++ E L+ PVGQ+L +Y +D M FFTG NV ++A+A SPN + VAVC++ + + AQ SIY + K+++ + + E F +C F+ SK+L V ++VW W G RV+ +P +L T+GP H+R+W D K L +E D DH WL RM A T+G ++ R SIL+ +I +E R+ + L G++++ T+ ++GF+ G +GF SVYE T DR+ PY ++ + +++ + E AVAY++ GRLL+ PL SVD +DES F+ ++PGGTH GA++ + + KPLLATVG D+ +R+WNYL+W C++ H+ +DP CV++HPSG + VG + ERIR+Y+V+ L+ REL K R L +S GGH+ AA G + V+ Sbjct: 19 DGVKLQFAHAFGVHGPIRDNVMFIRAENNV--GDEK--EALLFPVGQKLCLYWHEDSEMSFFTGTMPNVCGMLAMATSPNGKFVAVCDKVIETSNSGAQASIYMIKNRKKLKNVVTPPQKECFLNCCFSGDSKMLITVSDGPNRNMIVWDWASPTKPMKYQISLGQTAVTRVSSPLNNPPGVLQLITTGPYHIRVWNISGDNPIKSQVLY---KEHDNFVDHCWLTLDGGIQ--------------------------------RMAAVTEGTTAPNSNQRFGSILLCQSIDEDKLIEYRRTMTVVLQGNTQIRTIAKSSRGFIVGG---TNGFFSVYEKTDDRKDPYMHIKYFYCGRESFMSISANHNDEHAVAYSKTGRLLSFPLGSVDMIDESEAEKRFIDVIPGGTHEGAIIDSSLCAQKPLLATVGGDKSVRLWNYLKWECELTHKFNSDDPTCVSMHPSGIQILVGLR-----------ERIRMYNVMVNELKQFRELPLKGCRQLEYSNGGHMFAACVGQMISVY 497
BLAST of jgi.p|Trimin1|179117 vs. uniprot
Match: A0A7S0Z1R3_9CRYP (Hypothetical protein (Fragment) n=3 Tax=Hemiselmis TaxID=77924 RepID=A0A7S0Z1R3_9CRYP) HSP 1 Score: 194 bits (494), Expect = 2.920e-51 Identity = 146/495 (29.49%), Postives = 238/495 (48.08%), Query Frame = 1 Query: 202 GAEYLVHPVGQQLAMYRMDDGSMQFFTGRAKNVKEIVALAISPNKRAVAVCERTDDAAAAQVSIYSVATAKRVRTLTHALRGEFTSCAFNTSSKLLAAVGGEAEAQLVVWAWEKGKVVRAGGAGGGAHHGPRVTRLHFSPDDDARLTTSGPQHLRIWYTMPDGAQKVHSLLPSGREFDALADHTWLRSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARMVAATDGEGVRDTRGASILVFDAIAAHPFLELRQMIQAHLPGSSRLETVVPCAKGFLAAGGGVASGFLSVYEATADR-----RAPYALVRALPTR-AGALTALAVSRGGETAVAYARAGRLLALPLASVDALDESADHFVSLLPGGTHCGAVVAADVAVHKPLLATVGADRRLRVWNYLRWRCDIVHELRVEDPACVALHPSGYLVAVGFKASDDARRRRLPERIRLYHVLAAGLRPDRELSAKNVRALRFSRGGHLLAAAAGFSVCVF 1668 G +V+P G+ L +Y + M F + +NV+ I A+A S N++ + VCE+ D QV++Y+VA+ KR RT H FT+ AF++ SK LA VG E LV W W + KVV + V R+ FSP D+ ++ TSGP L++W + + K +++ + DH+W R++A+TD +G ++V ELR ++ + G+S + T+V + GF+ AG + G +SVYE R + PY + + A + +L++S E+ A+ + ++ P+A++D L E + F + G H V DV V KPL+AT GADR +RVWNY+ C++ + +D + +A+HPSG+ + VGF +++RL++VL L+ +E K+ R +RFS GGH AA ++ +F Sbjct: 36 GETSIVYPAGRHLGIYNTESKEMSFLL-QGENVEAITAMAASHNRKYLGVCEQLSDGGGGQVTVYNVASEKRYRTFQHPDCKSFTAVAFSSDSKFLATVGSAPEYLLVYWNWFQSKVVAS------VRVNSEVKRVSFSPLDNVQIATSGPGLLKLW-RLQESNLKGFNMVSGKAASQSFTDHSWAPGD------------------------------------RLLASTD-------QGDVLVVEQG-------ELRATVKTRMSGTS-IHTIVAYSSGFIVAG---SEGRMSVYEKNDAREKGEDKEPYHHFKTFKSPDAQDIISLSISHAEESLAAFFASNQVALFPIANIDILKEDQNQF-QFVGSGFHSAQVTGLDVCVRKPLVATCGADRSVRVWNYVDKTCEVAKVFQ-DDLSSIAIHPSGFHILVGFS-----------DKLRLFNVLIDDLKLFQEFPIKSCREVRFSHGGHRFAAVNISNIVIF 455
BLAST of jgi.p|Trimin1|179117 vs. uniprot
Match: A0A0M0JMK2_9EUKA (Wd repeat-containing protein 65 n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JMK2_9EUKA) HSP 1 Score: 182 bits (461), Expect = 3.910e-45 Identity = 163/548 (29.74%), Postives = 245/548 (44.71%), Query Frame = 1 Query: 118 YAFGVSGPVRDNVGFVLAEDSSLEGEDHGAEYLVHPVGQQLAMYRMDDGSMQFFTGRAKNVKEIVALAISPNKRAVAVCERTDDAAAAQVSIYSVATAKRVRTLTH------ALRGEFTSCAFNTSSKLLAAVGGEAEAQLVVWAWEKGKVVRAGGAGGGAHHGPRVTRLHFSPDDDAR---LTTSGPQHLRIWYTMPDGAQKVH--SLLPSGREFDALADHTWLRSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARMVAATD-GEGVRDTRGASILVFDAIAAHPFLELRQMIQAHLPGSSRLETVVPCAKGFLAAGGGVASGFLSVYEATADR-RAPYALVRALPTRAGA----------------LTALAVSRGGETAVAYARAGRLLALPLASVDALDESAD--HFVSLLPGGTHCGAVVAADVAVHKPLLATVGADRRLRVWNYLRWRCDIVHELRVEDPACVALHPSGYLVAVGFKASDDARRRRLPERIRLYHVLAAGLRPDRELSAKNVRALRFSRGGHLLAAAAGFSVCVF 1668 +AFG+S V++NV LA D + ++HPVG+ +A+Y ++ M F ++ ALA+SP+K+ +AVCER + A Q+SIY V++ K+ + L + F + AF++ SKLLAA G E LV+W W+KG+ + A + ++R+ F P + A+ + T+G + R+W + DG K S L +E DH WL R+V TD GE RG H R+ G++ L VV A+GF+ AG A+G + ++E D R PY L A + +TALA+S E + +L P+A++D L +D HF L GG H G V D V KPLL T GADR +RVWNY R C+ V E C +LHP+G + VGF +++RL+++L L+ + + K R + F+RGG AA +G + +F Sbjct: 25 HAFGLSNDVQNNV---LAVDEAT---------ILHPVGRAIALYNLESRKMAFVRDGTSEKGDVTALALSPSKKYLAVCERNETA---QISIYHVSSQKKTKVLPQGGPLADSTADRFITAAFSSDSKLLAAATGNGE--LVLWLWDKGRQL----AFQKSSVPYAISRISFDPREHAQGATICTTGAKFFRLW-RLADGQLKPAPGSGLAIKKEPPVYTDHAWLPGDD-----------------------------------RVVGCTDMGEVQLLERGE--------VKHTITSAREA------GAASLSCVVAFARGFITAG---AAGLICIFEGPKDEERVPYQLSHTFVCWAPSSPLSSSSASSGRQPLDITALAISPSEEMLICSCANSQLATFPIANIDILSSGSDECHFTLLAGGGFHHGTVTGLDTCVQKPLLVTCGADRTVRVWNYTRRICEHVKHFADEPLGC-SLHPTGNQILVGFS-----------DKLRLFNILMNDLQLVADFAVKGCRCVSFARGGQYFAAVSGPHIFIF 486
BLAST of jgi.p|Trimin1|179117 vs. uniprot
Match: A0A482RU12_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RU12_9ARCH) HSP 1 Score: 175 bits (444), Expect = 5.370e-45 Identity = 151/494 (30.57%), Postives = 226/494 (45.75%), Query Frame = 1 Query: 64 GSRKASVVATEGTT------LVVRYAFGVSGPVRDNVGFVLAEDSSLEGEDHGAEYLVHPVGQQLAMYRMDDGSMQFFTGRAKNVKEIVALAISPNKRAVAVCE--RTDDA---AAAQVSIYSVATAKRVRTLTHALRGEFTSCAFNTSSKLLAAVGGEAEAQLVVWAWEKGKVVRAGGAGGGAHHGPRVTRLHFSPDDDARLTTSGPQHLRIWYTMPDGAQKVHSLLPSGRE-FDALADHTWLRSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARMVAATDGEGVRDT---RGASILVFDAIAAH------PFL-ELRQMIQAHLPGSSRLETVVPCAKGFLAAGGGVASGFLSVYEATADRRAPYALVRALPTRAGALTALAVSRGGETAVAYARAGRLLALPLASV---------------DALDESADHFVSLLP------------GGTHCGAVVAADVAVHKPLLATVGADRRLRVWNYL 1398 G+ A+V A T V+ AFG P R + ++A +S +D+ ++ L+H VG+QL+++ + GS +FF R++NV ++ + S N+R VA+CE R D A A +QVS+YS++T R++TL H+L + F KL+AA+ E + +V+W WEK KV + H T L +P ++ LTTSG L+ W PDG K ++LP+ +E D DH WL S+ RM+ D + D R +I +F+ + P L E+RQ IQ L R+E +VP K F G G G+ + +E T D+ PY R L L V E V + GRLL++PL + +++ + SL+P GG H +++AAD+A +PLL TVGAD RVWNYL Sbjct: 11 GNHAAAVAAATHTNPAHAIRFTVKSAFGCQ-PTR--IDPLVAFSASSGNKDY-SDRLLHKVGKQLSVFDPETGSQEFFENRSRNVIDVTHFSTSANQRFVAMCEAIRHDKASSDAGSQVSVYSLSTFNRLKTLHHSLPRPYVCATFCGDPKLVAALSDEPDRHIVIWQWEKEKVHKV------VHVHVHATLLRSAPSNNLMLTTSGTGALKHWTLAPDGTLKHGNMLPTAKESLDVYTDHCWLPSTHSQH--------------------------------RMIVLVDPDSSNDINRHRKQAIYIFEGVDNEVPSSNLPLLMEMRQTIQLKLDQGCRVEKLVPSLKAFSVVGMG---GYFAAFERTDDKAEPYVESRRLALGDKHLIGGCVYPSEEKMVLLTKQGRLLSMPLDATIEQIKKAMGGTQDDAESVHSKEEGHRSLVPSLQSGGISDLRAGGHHTSSILAADMAFERPLLVTVGADNTARVWNYL 459
BLAST of jgi.p|Trimin1|179117 vs. uniprot
Match: K3WK97_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WK97_GLOUD) HSP 1 Score: 177 bits (450), Expect = 1.100e-43 Identity = 148/580 (25.52%), Postives = 249/580 (42.93%), Query Frame = 1 Query: 82 VVATEGTTLVVRYAF----GVSGPVRDNVGFVLAEDSSLEGEDHGAE--------YLVHPVGQQLAMYRMDDGSMQFFTGRAKNVKEIVALAISPNKRAVAVCERTDDAAAAQVS----------------------------------------IYSVATAKRVRTLTHALRGEFTSCAFNTSSKLLAAVGGEAEAQLVVWAWEKGKVVRAGGAGGGAHHGPRVTRLHFSPDDDARLTTSGPQHLRIWYTMPDGAQKVHSLLPSGREFDALADHTWLRSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARMVAATDGEGVRDTRGASILVFDAIAAHPFLELRQMIQAHLPGSSRLETVVPCAKGFLAAGGGVASGFLSVYEATADRRAPYALVRALPTRAGALTALAVSRGGETAVAYARAGRLLALPLASVDALDESADHFVSLLPGGTHCGAVVAADVAVHKPLLATVGADRRLRVWNYLRWRCDIVHELRVEDPACVALHPSGYLVAVGFKASDDARRRRLPERIRLYHVLAAGLRPDRELSAKNVRALRFSRGGHLLAAAAGFSVCV 1665 +VA +TLV G+ G +V F L + +L G ++V+PVG + +Y ++ SM+FF K V+ + ISPN+ +A+ E A++ S IY ++ RVR+L SC+F+T +K LA + + W K++ + R +R+H P + + ++ SGP L+ W + K+ + +P RE + DH W++ MVA ++ +G+ +L F A A + ++L + H R+E + AKGF+ G ++GF S+YE + D + P+A VR + A ++ +S ETA+ ++ LL ++++D + E + G G +V D + +P+LA+ G D+ +RVWNY +++H E+P + LHP G+ + V FK ER+R+Y VL LR +REL+ K+ RA+R++RGGHL+A AAG +V V Sbjct: 16 LVANPSSTLVTHRVLSRELGIGGEDERDVSFQLKQTFALGFRSCGHNVVQFLGELHVVYPVGHHVVIYNLESYSMEFFH-HTKTVQSVQCFNISPNREFIAIAEIHHTNASSSQSPTTVAASGSTLPIPSPFNKAQPSLAMSAHLQEQQQQHVLCIYKTSSRSRVRSLLLPHHSSIVSCSFSTCNKFLALLEDAPAHNVTYWKVSNSKLLAS------CKCPSRGSRIHIHPHNPSYISVSGPMVLKYWI-WSNSEFKIGNFVPQLREHEHFVDHVWMKEY-------------------------------------MVALSE-KGL-------LLCFRASADYASVDLVHSYRCHHLSFVRMECITAHAKGFVLGG---SAGFFSIYETSEDPKDPFAFVRNVSVGDIAFESITISPSVETAIVCTKSQELLTFNMSAIDTMQEDRVEYKEFTRHGFQVGGIVQVDTCIQRPILASCGTDKSVRVWNYELKHYEVLHACS-EEPLALGLHPCGFQLIVAFK-----------ERVRVYTVLVESLRQNRELAIKSCRAVRYARGGHLVACAAGLTVLV 527
BLAST of jgi.p|Trimin1|179117 vs. uniprot
Match: A0A5D6Y514_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y514_9STRA) HSP 1 Score: 176 bits (445), Expect = 4.870e-43 Identity = 141/522 (27.01%), Postives = 231/522 (44.25%), Query Frame = 1 Query: 214 LVHPVGQQLAMYRMDDGSMQFFTGRAKNVKEIVALAISPNKRAVAVCER-------TDDAAAAQVS------------------------------IYSVATAKRVRTLTHALRGEFTSCAFNTSSKLLAAVGGEAEAQLVVWAWEKGKVVRAGGAGGGAHHGPRVTRLHFSPDDDARLTTSGPQHLRIWYTMPDGAQKVHSLLPSGREFDALADHTWLRSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARMVAATDGEGVRDTRGASILVFDAIAAHPFLELRQMIQAHLPGSSRLETVVPCAKGFLAAGGGVASGFLSVYEATADRRAPYALVRALPTRAGALTALAVSRGGETAVAYARAGRLLALPLASVDALDESADHFVSLLPGGTHCGAVVAADVAVHKPLLATVGADRRLRVWNYLRWRCDIVHELRVEDPACVALHPSGYLVAVGFKASDDARRRRLPERIRLYHVLAAGLRPDRELSAKNVRALRFSRGGHLLAAAAGFSVCVF 1668 +V+P + ++ + SM+F ++V+ + +SPN+ +AV E A A VS IY A+ RVR +T SC F+ +K LA + + W K++ + R R+H +P + + ++ SGP L+ W + K+ + LP RE D DH W + M+A ++ +G+ +L F A A ++L + H R+E + AKGF+ G ++GF S+YE + D + P++LVR++ A ++AVS ET V ++ LL ++S+D + E + G GAVV D+ V +P++A+ GAD+ +RVWNY + +++H+ ++P + LHP G+ VAV FK ER+R++++L LR REL K+ RA+R++RGGHLLA AAG +V VF Sbjct: 65 VVYPAAHHVVLFNTETSSMEFLH-HTRSVRSVQCFHLSPNRELLAVAETHHSNASSLHQGATAGVSLAAPSPAKPTASSLAVSVHLHEQHEQHVLCIYRTASRSRVRAITLPHHSSIVSCGFSACNKFLALLEDAPTHNVTYWKVSNAKLLAS------CKCPSRGARIHINPSNASYISVSGPTVLKYWL-WTNSEFKIGNFLPQLREQDHFVDHVWTKEY-------------------------------------MIALSE-KGL-------LLCFRASADFASVDLVHSYRCHHLSFVRMECITAHAKGFVLGG---SAGFFSIYETSDDPKDPFSLVRSVSVGDVAFESVAVSPSVETVVVCTKSQELLTFAMSSIDTVQEDRVDYREFARHGYQVGAVVQIDICVQRPIVASCGADKSVRVWNYELKQYELLHQCS-DEPLALGLHPCGFQVAVAFK-----------ERVRVFNILVESLRQVRELPVKSCRAIRYARGGHLLACAAGLTVLVF 518
BLAST of jgi.p|Trimin1|179117 vs. uniprot
Match: A0A7S4ULA6_GUITH (Hypothetical protein (Fragment) n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4ULA6_GUITH) HSP 1 Score: 165 bits (418), Expect = 7.530e-41 Identity = 140/505 (27.72%), Postives = 230/505 (45.54%), Query Frame = 1 Query: 175 DSSLEGEDHGAEYLVHPVGQQLAMYRMDDGSMQFFTGRAKNVKEIVALAISPNKRA-VAVCERTDDAAAAQVSIYSVATAKRVRTLTHALRGEFTSCAFNTSSKLLAAVGGEAEAQLVVWAWEKGKVVRAGGAGGGAHHGPRVTRLHFSPDDDARLTTSGPQHLRIWYTMPDGAQKVHSLLPSGREFDALADHTWLRSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARMVAATDGEGVRDTRGASILVFDAIAAHPFLELRQMIQAHLPGSSRLETVVPCAKGFLAAGGGVASGFLSVYEATADR-----RAPYALVRALPTRAGA-LTALAVSRGGETAVAYARAGRLLALPLASVDALDESADHFVSLLPGGTHCGAVVAADVAVHKPLLATVGADRRLRVWNYLRWRCDIVHELRVEDPACVALHPSGYLVAVGFKASDDARRRRLPERIRLYHVLAAGLRPDRELSAKNVRALRFSRGGHLLAAAAGFSVCVF 1668 D+ + D+ Y P G+ L +Y + M F + +NV+ + A++ SPN R +AV E+ D + QVS+++ A+ KRV+TL+HA F S F+ SK L VGG E ++ W W KVV + V R+ FSP D+ ++ +SGP L++W + + K ++L DH W R++A+TD +LV + ELR +++ L GS + ++ + GF+ G G +SVYE R + PY + + + +++VS ET A+ ++ P+ ++D L E +HF + G H V D+ V +PL+AT G DR +R+WNY+ C+ V ++ ED + +A+HPSG+ V +GF +++R ++VL LR +E K + +RFS GGH AA ++ +F Sbjct: 24 DNVIHTSDNSIAY---PAGRHLCVYNSETKEMSFLL-QPENVEVMTAISASPNTRKYLAVAEQLVDGTS-QVSVFNTASEKRVKTLSHADCKTFVSLCFSNDSKFLVTVGGGPEFTMIYWNWFHAKVVAS------CRINSEVRRVSFSPLDNVQIASSGPGLLKLW-RLQESTLKGFNMLSGKIASSNFTDHAWAPGD------------------------------------RLLASTDN--------GDVLVVEQG------ELRCIVKTRLSGSP-INSLSVYSSGFIIGG---TEGRMSVYEKNDAREKGEDKDPYHHFKTFRSNEHVEILSVSVSPQEETLAAFFSNNQVATFPIVNIDILKEGDNHF-QYVGSGFHSQPVTGLDICVRRPLVATCGGDRSVRIWNYMDKNCE-VSKIFSEDLSAIAIHPSGFHVLIGFT-----------DKLRFFNVLMDDLRQFQEFPIKGCKEVRFSHGGHKFAAVNISNIVIF 449
BLAST of jgi.p|Trimin1|179117 vs. uniprot
Match: A0A7S4PQP4_GUITH (Hypothetical protein (Fragment) n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PQP4_GUITH) HSP 1 Score: 165 bits (418), Expect = 1.290e-39 Identity = 140/505 (27.72%), Postives = 230/505 (45.54%), Query Frame = 1 Query: 175 DSSLEGEDHGAEYLVHPVGQQLAMYRMDDGSMQFFTGRAKNVKEIVALAISPNKRA-VAVCERTDDAAAAQVSIYSVATAKRVRTLTHALRGEFTSCAFNTSSKLLAAVGGEAEAQLVVWAWEKGKVVRAGGAGGGAHHGPRVTRLHFSPDDDARLTTSGPQHLRIWYTMPDGAQKVHSLLPSGREFDALADHTWLRSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARMVAATDGEGVRDTRGASILVFDAIAAHPFLELRQMIQAHLPGSSRLETVVPCAKGFLAAGGGVASGFLSVYEATADR-----RAPYALVRALPTRAGA-LTALAVSRGGETAVAYARAGRLLALPLASVDALDESADHFVSLLPGGTHCGAVVAADVAVHKPLLATVGADRRLRVWNYLRWRCDIVHELRVEDPACVALHPSGYLVAVGFKASDDARRRRLPERIRLYHVLAAGLRPDRELSAKNVRALRFSRGGHLLAAAAGFSVCVF 1668 D+ + D+ Y P G+ L +Y + M F + +NV+ + A++ SPN R +AV E+ D + QVS+++ A+ KRV+TL+HA F S F+ SK L VGG E ++ W W KVV + V R+ FSP D+ ++ +SGP L++W + + K ++L DH W R++A+TD +LV + ELR +++ L GS + ++ + GF+ G G +SVYE R + PY + + + +++VS ET A+ ++ P+ ++D L E +HF + G H V D+ V +PL+AT G DR +R+WNY+ C+ V ++ ED + +A+HPSG+ V +GF +++R ++VL LR +E K + +RFS GGH AA ++ +F Sbjct: 24 DNVIHTSDNSIAY---PAGRHLCVYNSETKEMSFLL-QPENVEVMTAISASPNTRKYLAVAEQLVDGTS-QVSVFNTASEKRVKTLSHADCKTFVSLCFSNDSKFLVTVGGGPEFTMIYWNWFHAKVVAS------CRINSEVRRVSFSPLDNVQIASSGPGLLKLW-RLQESTLKGFNMLSGKIASSNFTDHAWAPGD------------------------------------RLLASTDN--------GDVLVVEQG------ELRCIVKTRLSGSP-INSLSVYSSGFIIGG---TEGRMSVYEKNDAREKGEDKDPYHHFKTFRSNEHVEILSVSVSPQEETLAAFFSNNQVATFPIVNIDILKEGDNHF-QYVGSGFHSQPVTGLDICVRRPLVATCGGDRSVRIWNYMDKNCE-VSKIFSEDLSAIAIHPSGFHVLIGFT-----------DKLRFFNVLMDDLRQFQEFPIKGCKEVRFSHGGHKFAAVNISNIVIF 449 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|179117 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_15461 ID=mRNA_15461|Name=jgi.p|Trimin1|179117|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1674bp|location=Sequence derived from alignment at Contig_185:37620..39782- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGAGCCTAGACAAGGAAGAGGAGAGCGACGCTTACACAACAGATGGTCCback to top protein sequence of jgi.p|Trimin1|179117 >Trimin1|179117|e_gw1.185.40.1 ID=Trimin1|179117|e_gw1.185.40.1|Name=jgi.p|Trimin1|179117|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=558bp MSLDKEEESDAYTTDGPTVGRGSRKASVVATEGTTLVVRYAFGVSGPVRDback to top mRNA from alignment at Contig_185:37620..39782- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_15461 ID=mRNA_15461|Name=jgi.p|Trimin1|179117|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2163bp|location=Sequence derived from alignment at Contig_185:37620..39782- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_185:37620..39782- >mRNA_15461 ID=mRNA_15461|Name=jgi.p|Trimin1|179117|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1674bp|location=Sequence derived from alignment at Contig_185:37620..39782- (Tribonema minus UTEX_B_3156 )back to top |