mRNA_15316 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|352691 vs. uniprot
Match: A0A835ZK91_9STRA (J domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZK91_9STRA) HSP 1 Score: 774 bits (1999), Expect = 2.210e-278 Identity = 486/486 (100.00%), Postives = 486/486 (100.00%), Query Frame = 3
Query: 87 MSGSARHLHYHHQQGQHRAACGFAPAGQIRQYRSSGAARRDDEYYNVLGVSRSATAVEIKKAYFAQAKKYHPDANQGSDDAKKQFQKVTEAYEILGNVEKRQMYDQFGKAAVDGSGGGGDPFGGFGGXXXXXXXXXXXSGMYGQRINVDPQDIFGAFEEMFGRGGFQKGARGPRRGQNLQIGLNIGFLDAVFGAKREVNVAYKLRGKGNRKTKQVMVDIPPGVEDGMVFQIEGEGAEGEKGSPKGDLLVQVSVADDPYFTRDGADIHVEASVSLAQAILGGKVDVLTLEGMVELTVPPGTAPDTVLMMRQRGVKSLSGRGRGDQYVHVKVEVPTPNQLTVAQRKLVEQLRELEVAEMQGASSAAGAGDDSGAGPIRRFGRKVQDALSRLMAHMAKKTEEADKAKVAREAEAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSAQQKPEGSKEP 1544
MSGSARHLHYHHQQGQHRAACGFAPAGQIRQYRSSGAARRDDEYYNVLGVSRSATAVEIKKAYFAQAKKYHPDANQGSDDAKKQFQKVTEAYEILGNVEKRQMYDQFGKAAVDGSGGGGDPFGGFGGXXXXXXXXXXXSGMYGQRINVDPQDIFGAFEEMFGRGGFQKGARGPRRGQNLQIGLNIGFLDAVFGAKREVNVAYKLRGKGNRKTKQVMVDIPPGVEDGMVFQIEGEGAEGEKGSPKGDLLVQVSVADDPYFTRDGADIHVEASVSLAQAILGGKVDVLTLEGMVELTVPPGTAPDTVLMMRQRGVKSLSGRGRGDQYVHVKVEVPTPNQLTVAQRKLVEQLRELEVAEMQGASSAAGAGDDSGAGPIRRFGRKVQDALSRLMAHMAKKTEEADKAKVAREAEAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSAQQKPEGSKEP
Sbjct: 1 MSGSARHLHYHHQQGQHRAACGFAPAGQIRQYRSSGAARRDDEYYNVLGVSRSATAVEIKKAYFAQAKKYHPDANQGSDDAKKQFQKVTEAYEILGNVEKRQMYDQFGKAAVDGSGGGGDPFGGFGGXXXXXXXXXXXSGMYGQRINVDPQDIFGAFEEMFGRGGFQKGARGPRRGQNLQIGLNIGFLDAVFGAKREVNVAYKLRGKGNRKTKQVMVDIPPGVEDGMVFQIEGEGAEGEKGSPKGDLLVQVSVADDPYFTRDGADIHVEASVSLAQAILGGKVDVLTLEGMVELTVPPGTAPDTVLMMRQRGVKSLSGRGRGDQYVHVKVEVPTPNQLTVAQRKLVEQLRELEVAEMQGASSAAGAGDDSGAGPIRRFGRKVQDALSRLMAHMAKKTEEADKAKVAREAEAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSAQQKPEGSKEP 486
BLAST of jgi.p|Trimin1|352691 vs. uniprot
Match: D8LIJ8_ECTSI (Heat shock protein 40 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIJ8_ECTSI) HSP 1 Score: 313 bits (802), Expect = 3.930e-97 Identity = 172/337 (51.04%), Postives = 228/337 (67.66%), Query Frame = 3
Query: 174 RQYRSSGAARRDDEYYNVLGVSRSATAVEIKKAYFAQAKKYHPDANQGSDDAKKQFQKVTEAYEILGNVEKRQMYDQFGKAAVD-------GSGGGGDPFGGFGGXXXXXXXXXXXSGMYGQRINVDPQDIFGAFEEMFGR--GGFQKGARGPRRGQNLQIGLNIGFLDAVFGAKREVNVAYKL--RGKGNRKTKQVMVDIPPGVEDGMVFQIEGEGAEGEKGSPKGDLLVQVSVADDPYFTRDGADIHVEASVSLAQAILGGKVDVLTLEGMVELTVPPGTAPDTVLMMRQRGVKSLSGRG----RGDQYVHVKVEVPTPNQLTVAQRKLVEQLRE 1139
RQ+ S+ A + D +Y+VLGV++ A E+KK YF AKKYHPD N+ + DAK +FQ+VTEAYE+L + +KR YDQFG A VD G GGGGDPF GFGG G + +++DPQD+F E++FG GG Q+ RGPR GQ+LQ+ + + FL+A FG R ++V Y + GK RKT+ V V++P GVE G+ + GEGAEGEKG+P GDL VQ+ VA DPYF R GAD+HV A VS+AQA LGGKVD++T++GMVE+T+P G PD VLM+R RG+ L+G G RG+Q VH+++ +PT +L QRKL+E LRE
Sbjct: 96 RQFHSTRPAEKRD-FYDVLGVAKGADKSEVKKKYFQLAKKYHPDQNKDNPDAKAKFQEVTEAYEVLSDSDKRSRYDQFGHAGVDPNNAGAGGPGGGGDPFAGFGGFRGGPFQ----QGGFQSNVDIDPQDLF---EQLFGAQMGGRQRRPRGPRPGQDLQLRMKLSFLEAAFGTNRSLDVTYHVVEGGKRRRKTRSVKVEVPGGVESGIAIHVRGEGAEGEKGAPNGDLYVQLEVAPDPYFERSGADLHVTADVSIAQAALGGKVDIMTIDGMVEVTIPKGAQPDAVLMLRGRGLPRLTGSGASAGRGNQLVHLRILIPT--KLNDRQRKLMEDLRE 422
BLAST of jgi.p|Trimin1|352691 vs. uniprot
Match: A0A448ZBY7_9STRA (J domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZBY7_9STRA) HSP 1 Score: 252 bits (644), Expect = 3.030e-74 Identity = 143/323 (44.27%), Postives = 205/323 (63.47%), Query Frame = 3
Query: 141 AACGFAPAGQIRQYRSSGAARRDDEYYNVLGVSRSATAVEIKKAYFAQAKKYHPDANQGSDDAKKQFQKVTEAYEILGNVEKRQMYDQFGKAAVDGS----GGGGDPFGGFGGXXXXXXXXXXXSGMYGQRINVDPQDIFGAFEEMFGRGGFQKGARGPRRGQNLQIGLNIGFLDAVFGAKREVNVAYKLRGKGNR----KTKQVMVDIPPGVEDGMVFQIEGEGAEGEKGSPKGDLLVQVSVADDPYFTRDGADIHVEASVSLAQAILGGKVDVLTLEGMVELTVPPGTAPDTVLMMRQRGVKSLSGRGRGDQYVHVKVEVP 1085
AA A +R + SSGA R + Y VLGV +SA +IKKAYF AK+YHPD N+ + A ++F++ T AYE L + E+R+MYDQFG AA D + G+PFGGFG SG G+ +DP+++F AF G + RGP+RG +LQ+ + + F +AV GA + +N+ Y++ + N K + V VD PPG+++GM ++ GEGAEG+ G+P+G+LLVQV V +D YF RDG+++H EA +S+ QAILGG VDV TL+G VE+ +P G PD LM+R +G++ L G +GD VH+K+E+P
Sbjct: 83 AAAKHNRASNLRSF-SSGAKR---DLYEVLGVPKSANKADIKKAYFKLAKQYHPDTNKDDEGAAEKFKEATAAYETLSDDEQRKMYDQFGHAATDPNFQQQQQQGNPFGGFG--FQDGGFHFHSSGGGGE---IDPEELFDAFF-----GXXXRRRRGPQRGSDLQMHVRLSFKEAVQGASKNLNLRYQVMNRENGQIEIKERDVTVDTPPGIDNGMNLRLSGEGAEGDPGAPRGNLLVQVLVDEDDYFVRDGSNVHTEAMISITQAILGGTVDVKTLDGEVEVKIPKGCQPDAKLMLRGKGIQKLHGASKGDHVVHLKIEIP 391
BLAST of jgi.p|Trimin1|352691 vs. uniprot
Match: A0A812VKF9_SYMMI (DnaJ protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812VKF9_SYMMI) HSP 1 Score: 248 bits (632), Expect = 5.770e-74 Identity = 149/325 (45.85%), Postives = 210/325 (64.62%), Query Frame = 3
Query: 210 DEYYNVLGVSRSATAVEIKKAYFAQAKKYHPDANQGSDDAKKQFQKVTEAYEILGNVEKRQMYDQFGKAAVDGSGGGGDPFGGFGGXXXXXXXXXXXSGMYGQRINVDPQDIFGAFEEMFGRGGFQKGARGPRRGQNLQIGLNIGFLDAVFGAKREVNVAYKLRGK-GNRKTKQVMVDIPPGVEDGMVFQIEGEGAEGEKGSPKGDLLVQVSVADDPYFTRDGADIHVEASVSLAQAILGGKVDVLTLEGMVELTVPPGTAPDTVLMMRQRGVKSLSGRGRGDQYVHVKVEVPTPNQLTVAQRKLVEQLRELEVAEMQGASSAAG 1181
++YYN+LG+ + A+ EIKK YF AKK+HPD N+ A+ +F+++TEAYE+L + +KRQ+YD +G A VDGS XXXXXXXXXXX G VD ++F FE MFG GA +RG+++Q L + F +AV G +EVNV Y R G KTK V V +P GV+DG+V +++GEG +G G GDL +++ V DPYF RDG ++HVE +S+ QAILGG VDVLTL+GMVE+ VP GT PD L++R +G+K L+ RGDQY+H+K+ +P +++ Q++L LR+ E+ + +G S G
Sbjct: 4 EDYYNILGIDKGASKSEIKKKYFELAKKFHPDVNK-EPSAEIKFKQITEAYEVLEDDQKRQLYDSYGHAGVDGSAXXXXXX-----XXXXXXXXXXXXXXXGHAQQVDADELFEMFEGMFG------GAGARQRGRDVQQVLQLSFFEAVNGCTKEVNVKYTDRNAPGTTKTKTVKVAVPAGVDDGVVMRVQGEGGQGLPGKGSGDLRLEIRVKKDPYFVRDGPNVHVEQPISITQAILGGVVDVLTLKGMVEVKVPQGTQPDAKLVLRGKGIKDLNSIHRGDQYIHLKIRIP--KKVSDRQKEL---LRKFEIEDSEGGSGGVG 311
BLAST of jgi.p|Trimin1|352691 vs. uniprot
Match: A0A1E7FR18_9STRA (DnaJ_C-domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FR18_9STRA) HSP 1 Score: 246 bits (628), Expect = 9.870e-74 Identity = 132/301 (43.85%), Postives = 191/301 (63.46%), Query Frame = 3
Query: 213 EYYNVLGVSRSATAVEIKKAYFAQAKKYHPDANQGSDDAKKQFQKVTEAYEILGNVEKRQMYDQFGKAAVDGS------GGGGDPFGGFGGXXXXXXXXXXXSGMYGQRINVDPQDIFGAFEEMFGRGGFQKGARGPRRGQNLQIGLNIGFLDAVFGAKREVNVAYKLRGKGNR----KTKQVMVDIPPGVEDGMVFQIEGEGAEGEKGSPKGDLLVQVSVADDPYFTRDGADIHVEASVSLAQAILGGKVDVLTLEGMVELTVPPGTAPDTVLMMRQRGVKSLSGRGRGDQYVHVKVEVP 1085
+ Y VLGV RS+ E+KKAYF AKK+HPD N+ + A +F++ T AYE L + ++R++YDQFG AA D + PFGG GG G G +DP ++F AF FG G ++ RGP+RG +LQ+ + + F +AV GA +++++ Y++ + N K + V VD PPG+++GM ++ GEGAEG+ G+P+G+LLVQV V +D YF RDGA++H EA +S+ QAILGG VDV TL G VE+ VP G PD LM+R +G++ L G +G+ VH+K+E+P
Sbjct: 3 DLYEVLGVPRSSDKGEVKKAYFKLAKKFHPDTNKDDEKAADKFKEATAAYETLSDDKQRKLYDQFGHAATDPNFQQXXXXXXXXPFGGAGGGFNFQDGSFHFGGQGGAGGEIDPDELFEAF---FGGGSRRR--RGPQRGSDLQMHVRLSFQEAVKGASKDLHLRYQVMNRENGQVEIKERDVKVDTPPGIDNGMNLRVSGEGAEGDAGAPRGNLLVQVLVDEDDYFVRDGANVHTEAPISITQAILGGTVDVKTLNGEVEVKVPQGCQPDMQLMLRGKGIQKLHGASKGNHVVHLKIEIP 298
BLAST of jgi.p|Trimin1|352691 vs. uniprot
Match: A0A7S3VBQ1_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VBQ1_9STRA) HSP 1 Score: 251 bits (640), Expect = 1.450e-73 Identity = 145/311 (46.62%), Postives = 201/311 (64.63%), Query Frame = 3
Query: 213 EYYNVLGVSRSATAVEIKKAYFAQAKKYHPDANQGSDDAKKQFQKVTEAYEILGNVEKRQMYDQFGKAAVDGSGG----GGDPFGGFGGXXXXXXXXXXXSGMY---GQRINVDPQDIFGAFEEMFGRGGFQKGARGPRRGQNLQIGLNIGFLDAVFGAKREVNVAYKLR----GKGNRKTKQVMVDIPPGVEDGMVFQIEGEGAEGEKGSPKGDLLVQVSVADDP--YFTRDGADIHVEASVSLAQAILGGKVDVLTLEGMVELTVPPGTAPDTVLMMRQRGVKSLSGRGRGDQYVHVKVEVP---TPNQ 1097
++Y L V +SA +KKAYF AK+YHPD N+G + A ++F+KVTEAYE+L + ++R++YD +G A VD + G GG+PFGG XXXXXX S + G +DP+D+F AF G + RGPRRG +LQ+ +N+ F+DAV G KR++NV Y+LR G+ K + V IP G++ GM ++ G+GAEG+ G+P+GDL+V V V +D YF R+GAD+HVE VS+ QAILGG VDV TL G E+ +P G PDT LMMR +G+ L +G+Q VH+K+E+P TP Q
Sbjct: 94 DFYTTLNVPKSADKASVKKAYFKLAKEYHPDTNKGDEKASEKFKKVTEAYEVLSDDKQRELYDNYGHAGVDPNSGFNQQGGNPFGGXXXXXXXXXGFNDGSFHFHSSGGGQQIDPEDLFDAFF------GGSRRQRGPRRGADLQMHVNLPFMDAVLGVKRDLNVRYQLRDPVSGRVEVKERSVECSIPAGIDSGMNLRLGGQGAEGDPGAPRGDLMVTVIVEEDENDYFQRNGADVHVEIPVSVTQAILGGSVDVKTLTGTAEMKIPQGCQPDTKLMMRGKGIPYLKSSQKGNQIVHLKIEIPQKVTPKQ 398
BLAST of jgi.p|Trimin1|352691 vs. uniprot
Match: A0A7S3DRQ6_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DRQ6_9STRA) HSP 1 Score: 251 bits (642), Expect = 1.580e-73 Identity = 141/338 (41.72%), Postives = 218/338 (64.50%), Query Frame = 3
Query: 186 SSGAARRDDEYYNVLGVSRSATAVEIKKAYFAQAKKYHPDANQGSDDAKKQFQKVTEAYEILGNVEKRQMYDQFGKAAVDGS--GGGGDPFG-GFGGXXXXXXXXXXXSGMYGQRINVDPQDIFGAFEEMFGRGGFQKGARGPRRGQNLQIGLNIGFLDAVFGAKREVNVAYKL----RGKGNRKTKQVMVDIPPGVEDGMVFQIEGEGAEGEKGSPKGDLLVQVSVADDPYFTRDGADIHVEASVSLAQAILGGKVDVLTLEGMVELTVPPGTAPDTVLMMRQRGVKSLSGRGRGDQYVHVKVEVPTPNQLTVAQRKLVEQLRELEVAEMQGASSAA 1178
SSG R ++Y VLGV +SA IKKAYF AK++HPD NQG+D A +F++ TEAYE+L + ++R+MY+QFG A VD + G G+PFG GF G G G+ +D ++IF F G G ++ +RGPRRGQ+LQ+ + + F++AVFG ++++++ Y+ G + K ++V V IP G+++GM +++G+GAEG+ G+ G+LLVQV V DP F RDG D+H E +++ QA+LGG VDV TL+G VE+ +P G PD L++R +G++ L+G +G+ YVHVK+E+P +++ Q +L+ + E + +G + AA
Sbjct: 129 SSGGKR---DFYEVLGVPKSADKATIKKAYFKLAKQHHPDTNQGNDKAADKFKEATEAYEVLSDDKQREMYNQFGHAGVDPNFQGADGNPFGEGFEGFNFQDGSFHFQGGGPGE---MDAEEIFDMFFGSQGGGSRRRRSRGPRRGQDLQMHVRVSFMEAVFGTEKDLDLRYQQVNSKTGSVSVKERKVNVKIPAGIDNGMNLRLQGQGAEGDPGAQSGNLLVQVIVDSDPNFERDGYDVHTEVPINIIQAVLGGTVDVKTLKGEVEMKIPKGCQPDAKLLLRGKGIQELNGHRKGNHYVHVKLEIP--KEISKRQEELLREFEEEGKPKSKGFAKAA 458
BLAST of jgi.p|Trimin1|352691 vs. uniprot
Match: A0A1Z5K114_FISSO (Curved DNA-binding protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K114_FISSO) HSP 1 Score: 246 bits (627), Expect = 1.900e-72 Identity = 144/333 (43.24%), Postives = 201/333 (60.36%), Query Frame = 3
Query: 144 ACGFAP----------AGQIRQYRSSGAARRDDEYYNVLGVSRSATAVEIKKAYFAQAKKYHPDANQGSDDAKKQFQKVTEAYEILGNVEKRQMYDQFGKAAVDGSGGGGDPFGGFG-----GXXXXXXXXXXXSGMYGQRINVDPQDIFGAFEEMFGRGGFQKGARGPRRGQNLQIGLNIGFLDAVFGAKREVNVAYKL----RGKGNRKTKQVMVDIPPGVEDGMVFQIEGEGAEGEKGSPKGDLLVQVSVADDPYFTRDGADIHVEASVSLAQAILGGKVDVLTLEGMVELTVPPGTAPDTVLMMRQRGVKSLSGRGRGDQYVHVKVEVP 1085
AC F P G Q R +A + D +Y VLGVSR+A EIKKAYF AK+YHPD N+ +A ++F+ VTEAYE+L + ++R +YDQFG A VD + G+P G GQ I DP+D+F F FG G ++ RGPRRG +LQ+ + + F +AVFG +++N+ Y++ G+ K K+V V IPPG++ GM ++ G+GAEG+ G+P G+LLVQV V D YF RDG D+H E +S+ QAILGG VDV TL G VE+ +P G PDT LM+R +G++ L G +G+Q VH+K+++P
Sbjct: 3 ACSFRPQENYFRXXXNCGSPSQVRCFSSAGKKD-FYEVLGVSRTADKAEIKKAYFKLAKQYHPDTNRDDKEAAEKFKTVTEAYEVLSDEKQRGLYDQFGHAGVDPNFQAGNPXXXXXXXXXXGFNFNDGSFHFHGSAGGQEI--DPEDLFDMF---FGSG--RRRPRGPRRGSDLQMQVRLTFQEAVFGVDKDLNLQYQVVDRKTGQVEVKDKEVTVSIPPGIDTGMNIRLAGQGAEGDPGAPAGNLLVQVIVDPDDYFERDGFDVHTEVPISVTQAILGGTVDVRTLSGEVEVKIPKGCQPDTKLMLRGKGIQELRGTRKGNQVVHLKLQIP 327
BLAST of jgi.p|Trimin1|352691 vs. uniprot
Match: A0A7S2LGX2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LGX2_9STRA) HSP 1 Score: 240 bits (612), Expect = 2.200e-70 Identity = 140/299 (46.82%), Postives = 200/299 (66.89%), Query Frame = 3
Query: 213 EYYNVLGVSRSATAVEIKKAYFAQAKKYHPDANQGSDDAKKQFQKVTEAYEILGNVEKRQMYDQFGKAAVD----GSGGGGDPFGGFG-GXXXXXXXXXXXSGMYGQRINVDPQDIFGAFEEMFGRGGFQKGARGPRRGQNLQIGLNIGFLDAVFGAKREVNVAYKLRGKGNRKTKQ--VMVDIPPGVEDGMVFQIEGEGAEGEKGSPKGDLLVQVSVADDPYFTRDGADIHVEASVSLAQAILGGKVDVLTLEGMVELTVPPGTAPDTVLMMRQRGVKSLSGRG-RGDQYVHVKVEVP 1085
++Y VLGVS+ A EIKKAYF AK+YHPD N+ + +A ++F++ T AYE+L + +++++YD +G A VD G GD F GF G XXXXXXXXXX + D +D+F AF FG G + RGPRRG +LQ+ +N+ F +AVFG+ +++ + Y++R TK+ V V+ P GV+ GM +++G+GAEG+ G+P+G+LLVQV V +D YF RDG D+H E +S QA+LGG VDV TL G+VE+ +P G PDT LM+R +G+ L G G RG+Q H+K+E+P
Sbjct: 17 DFYEVLGVSKGADKGEIKKAYFKLAKEYHPDRNKDNPEAAEKFKEATAAYEVLSDEKQKELYDSYGHAGVDPNFQAGQGFGDGFAGFDFGGXXXXXXXXXXXXXXXXAHDADIEDLFEAF---FGGGAGGRRQRGPRRGSDLQMRVNLSFQEAVFGSSKDLKLKYQVRENDRYVTKEREVTVETPAGVDTGMNLRLQGQGAEGDPGAPRGNLLVQVIVEEDEYFHRDGFDVHTEVPISFVQAVLGGTVDVRTLTGIVEMKIPSGCQPDTKLMLRGKGIPRLHGNGGRGNQIAHLKIEIP 312
BLAST of jgi.p|Trimin1|352691 vs. uniprot
Match: A0A7S2UKR1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UKR1_9STRA) HSP 1 Score: 239 bits (610), Expect = 3.260e-70 Identity = 144/338 (42.60%), Postives = 215/338 (63.61%), Query Frame = 3
Query: 165 GQIRQYRS-SGAARRDDEYYNVLGVSRSATAVEIKKAYFAQAKKYHPDANQGSDDAKKQFQKVTEAYEILGNVEKRQMYDQFGKAAVD-GSGGGG-----DPFGGFGGXXXXXXXXXXXSGMYGQRINVDPQDIFGAFEEMFGRGGFQKGARGPRRGQNLQIGLNIGFLDAVFGAKREVNVAYKLR----GKGNRKTKQVMVDIPPGVEDGMVFQIEGEGAEGEKGSPKGDLLVQVSVADDP--YFTRDGADIHVEASVSLAQAILGGKVDVLTLEGMVELTVPPGTAPDTVLMMRQRGVKSLSGRGRGDQYVHVKVEVPTPNQLTVAQRKLVEQLRE 1139
G+ +Q RS S +A+RD +Y VL V+R A +KKAYF AKKYHPD N D A +F++ TEAYE+L + ++R++YD +G A VD SG GG +PF GF G G+ +DP+++F AF FG GG + RGPR+G +LQ+ + + F +AVFGA +++++ Y+LR G+ + K ++V VD P G+++GM ++ G+GAEG+ G+ +G+LLVQV V +D YF RDG DIH EA +SL QA+LGG VDV TL G+VE+ +P G D+ L++R +GV+ L +G+ VH+K+E+P ++T Q +L+ + E
Sbjct: 15 GKTQQVRSLSSSAKRD--FYEVLNVARGADKGTVKKAYFKLAKKYHPDTNTDDDSAADKFKEATEAYEVLSDPKQRELYDNYGHAGVDPNSGFGGXXXXXNPFEGF--NFNDGSFHFSQGGPGGE---IDPEELFDAF---FG-GGRSRRPRGPRKGADLQMHVRLTFQEAVFGASKDLHLRYQLRDSSTGQSSIKEREVTVDTPAGIDNGMNLRLSGQGAEGDPGASRGNLLVQVIVDEDKDGYFQRDGVDIHTEAPISLTQAVLGGMVDVRTLTGVVEMKIPKGCQIDSKLLLRGKGVQRLQSTSKGNHIVHLKMEIP--KKITPRQEELLREFDE 339 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352691 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_15316 ID=mRNA_15316|Name=jgi.p|Trimin1|352691|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1658bp|location=Sequence derived from alignment at Contig_128:364896..375974+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. CGGGAAGGCTGCTCGCGAGACACAGCCGCTGCGCGCAGCACCTGACGACAback to top protein sequence of jgi.p|Trimin1|352691 >Trimin1|352691|estExt_Genemark1.C_Ctg_1280037 ID=Trimin1|352691|estExt_Genemark1.C_Ctg_1280037|Name=jgi.p|Trimin1|352691|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=487bp MSGSARHLHYHHQQGQHRAACGFAPAGQIRQYRSSGAARRDDEYYNVLGVback to top mRNA from alignment at Contig_128:364896..375974+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_15316 ID=mRNA_15316|Name=jgi.p|Trimin1|352691|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=11079bp|location=Sequence derived from alignment at Contig_128:364896..375974+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_128:364896..375974+ >mRNA_15316 ID=mRNA_15316|Name=jgi.p|Trimin1|352691|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1461bp|location=Sequence derived from alignment at Contig_128:364896..375974+ (Tribonema minus UTEX_B_3156 )back to top |