mRNA_15306 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|175650 vs. uniprot
Match: A0A836CM90_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM90_9STRA) HSP 1 Score: 752 bits (1942), Expect = 3.180e-274 Identity = 384/384 (100.00%), Postives = 384/384 (100.00%), Query Frame = 1 Query: 1 MFLLADLLPSPAAGTLLGGAYNTAARCKLNSLRIPIVVVQVLSGFLTITSLHFPAALEHLLDRLSFLTQYGFFLSCVVSMTFYTTLLLVTLVPLGLAAIIATHWYLVAWLRKRRPQNMRGNRAPTVHKHSRVLIALAFYVFSITSGTIFQTFGCSILEEVGASGTSDLRADYSKECGTTEHRRYQAYAWCMIIVYPIGVPALFAWLLYKKRAPDHAGGTAETAAEQDVSSFLWQPYKPGLCRYWELVECLRRLALTGFLVFIMPGTAGQAAWSMLFAFASIVIFMAAKPHAELSQSRQYMLGGLIIYLSTTSARLEKLDYTHESSQGAVGILLALLTSALIATGVILALHGACDARHDIGAIRDAIRNKSSNVKHTAKAVSQQS 1152 MFLLADLLPSPAAGTLLGGAYNTAARCKLNSLRIPIVVVQVLSGFLTITSLHFPAALEHLLDRLSFLTQYGFFLSCVVSMTFYTTLLLVTLVPLGLAAIIATHWYLVAWLRKRRPQNMRGNRAPTVHKHSRVLIALAFYVFSITSGTIFQTFGCSILEEVGASGTSDLRADYSKECGTTEHRRYQAYAWCMIIVYPIGVPALFAWLLYKKRAPDHAGGTAETAAEQDVSSFLWQPYKPGLCRYWELVECLRRLALTGFLVFIMPGTAGQAAWSMLFAFASIVIFMAAKPHAELSQSRQYMLGGLIIYLSTTSARLEKLDYTHESSQGAVGILLALLTSALIATGVILALHGACDARHDIGAIRDAIRNKSSNVKHTAKAVSQQS Sbjct: 1 MFLLADLLPSPAAGTLLGGAYNTAARCKLNSLRIPIVVVQVLSGFLTITSLHFPAALEHLLDRLSFLTQYGFFLSCVVSMTFYTTLLLVTLVPLGLAAIIATHWYLVAWLRKRRPQNMRGNRAPTVHKHSRVLIALAFYVFSITSGTIFQTFGCSILEEVGASGTSDLRADYSKECGTTEHRRYQAYAWCMIIVYPIGVPALFAWLLYKKRAPDHAGGTAETAAEQDVSSFLWQPYKPGLCRYWELVECLRRLALTGFLVFIMPGTAGQAAWSMLFAFASIVIFMAAKPHAELSQSRQYMLGGLIIYLSTTSARLEKLDYTHESSQGAVGILLALLTSALIATGVILALHGACDARHDIGAIRDAIRNKSSNVKHTAKAVSQQS 384
BLAST of jgi.p|Trimin1|175650 vs. uniprot
Match: A0A835Z836_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z836_9STRA) HSP 1 Score: 219 bits (558), Expect = 1.810e-64 Identity = 138/333 (41.44%), Postives = 188/333 (56.46%), Query Frame = 1 Query: 118 QVLSGFLTITSLHFPAALEHLLDRLSFLTQYGFFLSCVVSMTFYTTLLLVTLVPLGLAAIIATHWYLVAWLRKRRPQNMRGN------RAPTVHKHSRVLIALAFYVFSITSGTIFQTFGCSILEEVGASGTSDLRADYSKEC-GTTEHRRYQAYAWCMIIVYPIGVPALFAWLLYKKRAPDHAGGTAETAAEQ-----------DVSSFLWQPYKPGLCRYWELVECLRRLALTGFLVFIMPGTAGQAAWSMLFAFASIVIFMAAKPHAELSQSRQYMLGGLIIYLSTTSARLEKLDYTHESSQGAVGILLALLTSALIATGVILALHGACD 1062 Q+++GFL +T L E+ + +L+ L F CV + TFY LL +TL PL A++ W L A R+ R + + G R + KH +AL F V+ S IFQTF C ++E+ T LRADYS +C +E+ RY AYA M +VYP+GVPAL+A LL KR A A AA SSFLW YKP +WE+VEC RR+ LTG LVFI+PG+AGQAA S+LFAF +IFMA +PH E + RQY+LG +I+Y ++ +A L K + SQ VGI++ ++++ALI V L+G D Sbjct: 23 QLVAGFLEVTGLQLAPTFENFIHKLAILPNLSFAWGCVYNATFYEKLLAMTLGPLVAVALLGCSW-LWAVAREHRLRRVAGADAARAARLKALRKHWTAFLALTFLVYGTVSSIIFQTFACDYMQELD---TYYLRADYSIQCYNNSEYWRYFAYAMTMFVVYPLGVPALYALLLCFKRRQHQARQGAVAAAPSVQGLEPHWDLVHASSFLWAQYKPK-AEWWEMVECARRVVLTGVLVFILPGSAGQAAVSVLFAFLLTLIFMAVRPHREHAMQRQYLLGAVIVYFASMNALLIKSQVSGAQSQLVVGIVMIIISTALIVAAVAQTLYGVAD 350
BLAST of jgi.p|Trimin1|175650 vs. uniprot
Match: A0A835ZPJ6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZPJ6_9STRA) HSP 1 Score: 211 bits (536), Expect = 1.060e-61 Identity = 133/331 (40.18%), Postives = 183/331 (55.29%), Query Frame = 1 Query: 109 VVVQVLSGFLTITSLHFPAALEHLLDRLSFLTQYGFFLSCVVSMTFYTTLLLVTLVPLGLAAIIATHWYLVAWLRKRRPQNMRGNRAP------TVHKHSRVLIALAFYVFSITSGTIFQTFGCSILEEVGASGTSDLRADYSKECGTTEHRRYQAYAWCMIIVYPIGVPALFAWLLYKKR-------------APDHAGGTAETAAEQDVSSFLWQPYKPGLCRYWELVECLRRLALTGFLVFIMPGTAGQAAWSMLFAFASIVIFMAAKPHAELSQSRQYMLGGLIIYLSTTSARLE--KLDYTHE-SSQGAVGILLALLTSALIATGV 1035 +VVQ+L GF+ IT L P A E LD+L+F+ + + C+ + FY LL TL PL A++ W L A RR + G A + +H + + + F F S +F+TF C EE+G LRADYS +C + Y AYA+C ++VYPIG+PALFA L+++KR D G + + + S FLW+ YK YW++ EC RRL LTGF+ F++PG AGQAA SML +F ++ FM A+PH E QY+LG +IIYLST +A L +LDY++E SS+ VG LL L ALI V Sbjct: 1 IVVQLLCGFVAITGLALPEAYEQFLDKLAFIADFTIMMGCIADLDFYDKLLATTLAPLMYIALVGCSW-LAAQHCVRRARLDAGETAAQLADLDALRRHWTLFLGILFLNFGSVSSVVFRTFACEHFEELGEWY---LRADYSIQCFANGYWWYAAYAFCAMLVYPIGIPALFAVLVWQKRKLRRCKANLLVPATQDSTGSPSRSDRLFEASGFLWEQYKTQ-AEYWKVFECARRLLLTGFIAFLLPGEAGQAAISMLLSFTLLLAFMIARPHRERQVHWQYLLGAVIIYLSTAAALLISLRLDYSNEPSSRRVVGWLLVALNVALITAAV 326
BLAST of jgi.p|Trimin1|175650 vs. uniprot
Match: A0A835ZA22_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA22_9STRA) HSP 1 Score: 209 bits (532), Expect = 4.650e-61 Identity = 129/314 (41.08%), Postives = 180/314 (57.32%), Query Frame = 1 Query: 91 SLRIPIVVVQVLSGFLTITSLHFPAALEHLLDRLSFLTQYGFFLSCVVSMTFYTTLLLVTLVPLGLAAIIATHWYLVAWLRKRRPQNMRGN------RAPTVHKHSRVLIALAFYVFSITSGTIFQTFGCSILEEVGASGTSDLRADYSKEC-GTTEHRRYQAYAWCMIIVYPIGVPALFAWLLYKKRAPDHAGGTAETAAEQD-------VSSFLWQPYKPGLCRYWELVECLRRLALTGFLVFIMPGTAGQAAWSMLFAFASIVIFMAAKPHAELSQSRQYMLGGLIIYLSTTSARLEKLDYTHESSQGAVG 990 SL ++ Q+++GFL +T L A E+ + +L+ L F CV + TFY LL++TL PL A++ W L A +R+ R Q + G R + KH +AL F V+ S TIFQTF C ++E+ T LRADYS +C E+ RY AYA M +VYP+GVPAL+A LL +R H AA + SSFLW YKP +WE+VEC RR+ LTG LVFI+PG+AGQAA S+LFAF ++FMA +P+ E + RQY+LG +I+Y ++ +A L K + + + G G Sbjct: 1 SLCAVLLPPQLVAGFLEVTGLQLAPAFENFIHKLATLLNLSFAWGCVYNATFYEQLLVMTLGPLVAVALLGCSW-LWALVREHRVQRVAGADAARAVRLKALRKHWTAFLALTFLVYGTVSSTIFQTFACDYVQELD---TYYLRADYSIQCYNNLEYWRYFAYAMTMFVVYPLGVPALYALLLCSRRRQQHQAQQGLVAAAPNSHWDLVHASSFLWAQYKPE-AEWWEIVECARRVVLTGVLVFILPGSAGQAAVSVLFAFFLALMFMAVRPYREHTMQRQYLLGAVIVYFASMNALLIKSQVSDDQATGCRG 309
BLAST of jgi.p|Trimin1|175650 vs. uniprot
Match: A0A836CMM3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMM3_9STRA) HSP 1 Score: 213 bits (541), Expect = 1.190e-60 Identity = 141/353 (39.94%), Postives = 185/353 (52.41%), Query Frame = 1 Query: 82 KLNSLRIPIVVVQVLSGFLTITSLHFPAALEHLLDRLSFLTQYGFFLSCVVSMTFYTTLLLVTLVPLGLAAIIATHWYLVAWLRKRRPQNMRGNRAPTVHKHSRVLIALAFYVFSITSGTIFQTFGCSILEEVGASGTSDLRADYSKECGTTEHRRYQAYAWCMIIVYPIGVPALFAWLLYKKR---------------------------APDHA---------GGTAETAAEQDV--SSFLWQPYKPGLCRYWELVECLRRLALTGFLVFIMPGTAGQAAWSMLFAFASIVIFMAAKPHAELSQSRQYMLGGLIIYLSTTSARLEKLDYTHES-SQGAVGILLALLTSALI 1023 K +SLRI IVV+Q+L GF IT L P E L+D+ +FL+ + L C +TF LL+ TLVPLG++A++A S +F+TF C L E GAS LR DYS C T EH RY YA M+ ++P+G+PAL+A LL+ KR +P H+ GG++ A++ V S FLW+PY+ G +WELVEC+RRL LTG LVFIMPGTAGQAA S LFAFA +++FM A+PH S YMLG LI+Y ST SA L LD T ++ S VG+LL +L+ L+ Sbjct: 126 KFDSLRILIVVMQILWGFQHITGLPLPEPFEQLVDKFTFLSDFALLLGCAFRITFSQRLLITTLVPLGISALLAI------------------------------------------SCVVFETFACDELPETGASY---LRTDYSVSCDTAEHARYSIYAAVMVFIHPVGIPALYAALLWSKRRQDCAXXXXXXXXXXXXSTSDSAMPISSPHHSQLRESVVGNGGSSIRASDALVRASDFLWRPYRDGAF-WWELVECVRRLLLTGLLVFIMPGTAGQAAVSTLFAFALLIVFMGARPHRSRGDSANYMLGCLILYFSTISALLLYLDVTGDTDSHSIVGVLLVVLSVLLL 432
BLAST of jgi.p|Trimin1|175650 vs. uniprot
Match: A0A835YJS2_9STRA (TRP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJS2_9STRA) HSP 1 Score: 205 bits (521), Expect = 1.320e-58 Identity = 136/378 (35.98%), Postives = 194/378 (51.32%), Query Frame = 1 Query: 94 LRIPIVVVQVLSGFLTITSLHFPAALEHLLDRLSFLTQYGFFLSCVVSMTFYTTLLLVTLVPLGLAAIIATHWYLVAWLRKRRPQNMRGNRAP------TVHKHSRVLIALAFYVFSITSGTIFQTFGCSILEEVGASGTSDLRADYSKECGTTEHRRYQAYAWCMIIVYPIGVPALFAWLLYKKRA--PDHAGGT--------AETAAEQDVSSFLWQPYKPGLCRYWELVECLRRLALTGFLVFIMPGTAGQAAWSMLFAFASIVIFMAAKPHAELSQSRQYMLGGLIIYLSTTSARLEKLDYTHE-SSQGAVGILLALLTSALIATGVILALHGACDA----------------RHDIGAIRDAIRNKSSNVKHT 1128 LR+PIVV Q+L GF+ +T L +P ++ +SF + L CV + FY LL +TL PL + ++ W L W R ++ Q G A + +H +A F VF + S +F TF C L+ LRADYS +C T+E+ Y YA M+ VYPIG+ AL++ LL++K ++ G + A + + S FLW+ Y +WE+ EC+RRL +TGF+ FI+PGT QA ML AFAS++ ++ +PH + QY+ G LI+YLST SA L+KLD E SQ VGI+L +L+ A+IA V G A RH G + SS+VK T Sbjct: 43 LRLPIVVFQLLWGFMEVTGLAYPQVYATMIAYISFASDLTLVLGCVAELNFYQKLLAMTLAPLAVVVLLGASWLLACW-RAQQLQRSDGFEAAYLMHQEALRRHWTAFLAFTFLVFGVVSSVVFLTFVCEELDY--------LRADYSVQCYTSEYWAYAVYAAVMLFVYPIGITALYSVLLWRKSKLKMNNKGNSKIVRVASLAPRSRLVEASGFLWEQYTEET-PWWEIAECVRRLLITGFVAFILPGTVSQAVVGMLMAFASLMAYLMVRPHRDRRTYWQYITGALILYLSTMSALLQKLDIAKEPQSQAIVGIVLIVLSVAMIAAAVFQTFAGFTAAVVPKGTEGVTQEHHHHRHTSGCTEAEMDQVSSSVKAT 410
BLAST of jgi.p|Trimin1|175650 vs. uniprot
Match: A0A836CE47_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE47_9STRA) HSP 1 Score: 202 bits (514), Expect = 2.680e-58 Identity = 128/316 (40.51%), Postives = 181/316 (57.28%), Query Frame = 1 Query: 97 RIPIVVVQVLSGFLTITSLHFPAALEHL-----LDRLSFLTQYGFFLSCVVSMTFYTTLLLVTLVPLGLAAII-ATHWYLVAWLRKRRPQNMRGNRAPTVHKHSRVLIALAFYVFSITSGTIFQTFGCSILEEVGASGTSDLRADYSKECGTTEHRRYQAYAWCMIIVYPIGVPALFAWLLYKKRAPDHAGGTAETAAEQDVSSFLWQPYKPGLCRYWELVECLRRLALTGFLVFIMPGTAGQAAWSMLFAFASIVIFMAAKPHAELSQSRQYMLGGLIIYLSTTSARLEKLDYTHESSQGAVGILLALLTSALIA 1026 R P++V+Q+L+ F++IT + P L++L +D +S ++ CV+ ++FY LLL TLVPLG+A +I A Y + +P++ K VL+ AF V+S S TIFQTF C LE G GT LRADY+ +C T EH Y YA M+++YP+G+PA+FAW++ A E +A +SFL +PY P C YWE ECLRRL L G LVFIMPGTAGQ A + +FA + +++ + +PH E + Y LG II S ++ L ++ Y E SQ A+G LL L L+A Sbjct: 1 RTPVIVMQILTQFVSITGVALP--LQYLDFLQVMDLISLDLRWLTSPGCVLHLSFYQRLLLTTLVPLGIAGVILAPRAYRLC-----KPRSAGAKLQRVCEKDLHVLLVFAFLVYSGVSLTIFQTFACDYLEYDGPDGTWYLRADYTIQCRTPEHTAYVTYAAIMLLMYPLGIPAIFAWMIRLG-----AADVRERSALASATSFLRKPYSPHAC-YWECAECLRRLLLAGLLVFIMPGTAGQTAMACVFAVLAGMVYESVRPHEETGEEFLYRLGYGIIAASMFTSLLIQVKYVDEYSQNAIGKLLIALNVILLA 303
BLAST of jgi.p|Trimin1|175650 vs. uniprot
Match: A0A835ZGE0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGE0_9STRA) HSP 1 Score: 214 bits (544), Expect = 4.340e-58 Identity = 151/416 (36.30%), Postives = 204/416 (49.04%), Query Frame = 1 Query: 88 NSLRIPIVVVQVLSGFLTITSLHFPAALEHLLDRLSFLTQYGFFLSCVVSMTFYTTLLLVTLVPLGLAAIIATHWYLVAWLRKRRPQNMRGN----------RAPTVHKHSRVLIALAFYVFSITSGTIFQTFGCSILEEVGASGTSDLRADYSKECGTTEHRRYQAYAWCMIIVYPIGVPALFAWLLYKKR----------------------AP-------------------------DHAGGTAETAAEQD----VSSFLWQPYKPGLCRYWELVECLRRLALTGFLVFIMPGTAGQAAWSMLFAFASIVIFMAAKPHAELSQSRQYMLGGLIIYLSTTSARLEKLDYTHES-SQGAVGILLALLTSALIATGVILALHGACD------ARHDIGAIRDAIRNKSSNVKHTA 1131 N LRIPI+VVQ+++GF++IT L A E + RL+ + + F C+ FY LL+VTL PL A++ W W R A + KH L+A F V+ TS IFQTF C+ +EE+ S LRADYS C + Y AYA MI+VYP+GVPAL A LLY+KR AP + + G +E E SSF+W PY +WELVEC RR+ LTG LVFI PGT GQAA SML AF +++ FMA +PH + + +QY+LG LI+Y ++T+A L L+ + + SQ VGILL +L+ LI + + GA D R DA+ +SS+ + A Sbjct: 646 NYLRIPIIVVQLVAGFMSITGLQLAAPFEAFIRRLAVIPDFTFIFGCIFHANFYQKLLVVTLAPLLPVALLGCSWL---WSLSRXXXXXXXXXXXXXXXXXAHARALRKHWTALLAFTFLVYGTTSSYIFQTFACASVEELDESY---LRADYSIRCYDRRYWPYFAYAMAMILVYPVGVPALNAVLLYRKRRLNKEAELQAAFARANAAAARRAPAAKMPSQTSQVALPSSHATVSQLELERSNGGSEREQEYSGLVGASSFIWAPYT-NAAEWWELVECARRVLLTGILVFIAPGTPGQAAVSMLMAFVALLAFMAVRPHRDHAMHQQYLLGALIVYFASTNALLLDLNISQSAQSQTVVGILLVVLSVVLIVAAAVQTVSGAVDFTKVLKVRRPTATKEDALPRRSSSQRAEA 1054
BLAST of jgi.p|Trimin1|175650 vs. uniprot
Match: A0A835ZAX5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAX5_9STRA) HSP 1 Score: 201 bits (511), Expect = 1.460e-56 Identity = 136/355 (38.31%), Postives = 194/355 (54.65%), Query Frame = 1 Query: 28 SPAAGTLLGGAYNTAARCKLNSLRIPIVVVQVLSGFLTITSLHFPAALEHLLDRLSFLTQYGFFLSCVVSMTFYTTLLLVTLVPLGLAAIIATHWYLVAWLRKRRPQNMRGNRAPTVHKHSRVL-------IALAFYVFSITSGTIFQTFGCSILEEVGASGTS-DLRADYSKECGTTEHRRYQAYAWCMIIVYPIGVPALFAWLLYKKRAPDHA----------GGTAETAAEQD---VSSFLWQPYKPGLCRYWELVECLRRLALTGFLVFIMPGTAGQAAWSMLFAFASIVIFMAAKPHAELSQSRQYMLGGLIIYLSTTSARLEKLDYTHESSQGAV--GILLALLTSALI 1023 S +A L A N + NSLRIPIVVVQ+++G ++IT L + E + L+ L F C+ +FY LL +TL+PL + W L + R R Q +RAP + H+ L +A F+++S S T+FQTF C +EE + + LRADYS C + AY M++VYPIG+PAL+A++L++KR D G + E SSFLW Y +WE VEC RR+ TGFLVFIMPGTAGQAA S+L F ++V F+A +P+ + ++ QY LG LI++LS+ +A L K+D + ++ Q V G LL +L+ LI Sbjct: 73 SNSAMRLATRACNVHFKFNSNSLRIPIVVVQLIAGLVSITGLQLAPSFESFIHLLAILPDVSFAFGCIFDASFYERLLFMTLMPLVPVIFLGCSW-LWSMRRVHRLQET-ADRAPALAAHAESLRRHWTLFLAWTFFIYSTVSSTVFQTFACDKIEEWSSRPYNWYLRADYSITCYDQLYWCNFAYTAVMVLVYPIGIPALYAYVLHRKRCADQLERQYSDMSARGANTGSNGESSFIVASSFLWDQYTDE-AYWWEPVECARRVLFTGFLVFIMPGTAGQAAVSVLLTFVAVVSFLAVQPYRQRARHYQYFLGALIVFLSSFNALLLKVDASSDNGQSQVIIGALLIVLSVVLI 424
BLAST of jgi.p|Trimin1|175650 vs. uniprot
Match: A0A835YI67_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI67_9STRA) HSP 1 Score: 202 bits (515), Expect = 7.430e-55 Identity = 128/319 (40.13%), Postives = 181/319 (56.74%), Query Frame = 1 Query: 94 LRIPIVVVQVLSGFLTITSLHFPA-------ALEHLLDRLSFLTQYGFFLSCVVSMTFYTTLLLVTLVPLGLAAIIATHWYLVAWLRKRRPQNMRGNRAPTVHKHSRVLIALAFYVFSITSGTIFQTFGCSILEEVGASGTSDLRADYSKECGTTEHRRYQAYAWCMIIVYPIGVPALFAWLLYKKRAPDHAGGTAETAAEQDVSSFLWQPY-KPGLCRYWELVECLRRLALTGFLVFIMPGTAGQAAWSMLFAFASIVIFMAAKPHAELSQSRQYMLGGLIIYLSTTSARLEKLDYTHESSQGAVGILLALLTSALIA 1026 LRIPI+V+Q+L+ F++IT L P A++ L + +LT G C +++ FY LL+ TL PL + A+I T V+ R+ R K + F +FS S TIF+TF C L G GTS LRADYS +C T EH Y+ YA MI+VYP G+PA++ L+ ++ A + AE++ +SFLW+PY K GL YWE +EC+RRL LTG LVFI GTAGQ+A++ +FAF S V++ +PH Y LG I+++S ++ L ++ + E SQ VGILL L L+A Sbjct: 412 LRIPIIVLQLLTQFISITGLSLPPDYLKFLRAMDVLTLDMRWLTSPG----CALTIGFYQKLLISTLAPLAVVALIFTPRLCVSAARRGRRACGSAKLQRVAAKDFNAFLVFTFLIFSGVSLTIFETFACDFLRYDGPDGTSYLRADYSVQCFTPEHTAYRIYAAIMILVYPFGIPAMYC-LVLRRCAVEKGERRAESSRFATSASFLWRPYNKDGLAFYWESIECVRRLLLTGVLVFIDAGTAGQSAFACVFAFLSGVVYEQVRPHESSGDRSLYTLGYSIVFISMFTSLLLQVTFKDEQSQQVVGILLIALNVILLA 725 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|175650 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_15306 ID=mRNA_15306|Name=jgi.p|Trimin1|175650|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1155bp|location=Sequence derived from alignment at Contig_128:297478..299004- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGTTTCTGCTGGCGGACCTCTTGCCATCCCCTGCTGCGGGAACGCTGCTback to top protein sequence of jgi.p|Trimin1|175650 >Trimin1|175650|e_gw1.128.49.1 ID=Trimin1|175650|e_gw1.128.49.1|Name=jgi.p|Trimin1|175650|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=385bp MFLLADLLPSPAAGTLLGGAYNTAARCKLNSLRIPIVVVQVLSGFLTITSback to top mRNA from alignment at Contig_128:297478..299004- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_15306 ID=mRNA_15306|Name=jgi.p|Trimin1|175650|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1527bp|location=Sequence derived from alignment at Contig_128:297478..299004- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_128:297478..299004- >mRNA_15306 ID=mRNA_15306|Name=jgi.p|Trimin1|175650|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1155bp|location=Sequence derived from alignment at Contig_128:297478..299004- (Tribonema minus UTEX_B_3156 )back to top |