mRNA_15306 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|175650
Unique NamemRNA_15306
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|175650 vs. uniprot
Match: A0A836CM90_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM90_9STRA)

HSP 1 Score: 752 bits (1942), Expect = 3.180e-274
Identity = 384/384 (100.00%), Postives = 384/384 (100.00%), Query Frame = 1
Query:    1 MFLLADLLPSPAAGTLLGGAYNTAARCKLNSLRIPIVVVQVLSGFLTITSLHFPAALEHLLDRLSFLTQYGFFLSCVVSMTFYTTLLLVTLVPLGLAAIIATHWYLVAWLRKRRPQNMRGNRAPTVHKHSRVLIALAFYVFSITSGTIFQTFGCSILEEVGASGTSDLRADYSKECGTTEHRRYQAYAWCMIIVYPIGVPALFAWLLYKKRAPDHAGGTAETAAEQDVSSFLWQPYKPGLCRYWELVECLRRLALTGFLVFIMPGTAGQAAWSMLFAFASIVIFMAAKPHAELSQSRQYMLGGLIIYLSTTSARLEKLDYTHESSQGAVGILLALLTSALIATGVILALHGACDARHDIGAIRDAIRNKSSNVKHTAKAVSQQS 1152
            MFLLADLLPSPAAGTLLGGAYNTAARCKLNSLRIPIVVVQVLSGFLTITSLHFPAALEHLLDRLSFLTQYGFFLSCVVSMTFYTTLLLVTLVPLGLAAIIATHWYLVAWLRKRRPQNMRGNRAPTVHKHSRVLIALAFYVFSITSGTIFQTFGCSILEEVGASGTSDLRADYSKECGTTEHRRYQAYAWCMIIVYPIGVPALFAWLLYKKRAPDHAGGTAETAAEQDVSSFLWQPYKPGLCRYWELVECLRRLALTGFLVFIMPGTAGQAAWSMLFAFASIVIFMAAKPHAELSQSRQYMLGGLIIYLSTTSARLEKLDYTHESSQGAVGILLALLTSALIATGVILALHGACDARHDIGAIRDAIRNKSSNVKHTAKAVSQQS
Sbjct:    1 MFLLADLLPSPAAGTLLGGAYNTAARCKLNSLRIPIVVVQVLSGFLTITSLHFPAALEHLLDRLSFLTQYGFFLSCVVSMTFYTTLLLVTLVPLGLAAIIATHWYLVAWLRKRRPQNMRGNRAPTVHKHSRVLIALAFYVFSITSGTIFQTFGCSILEEVGASGTSDLRADYSKECGTTEHRRYQAYAWCMIIVYPIGVPALFAWLLYKKRAPDHAGGTAETAAEQDVSSFLWQPYKPGLCRYWELVECLRRLALTGFLVFIMPGTAGQAAWSMLFAFASIVIFMAAKPHAELSQSRQYMLGGLIIYLSTTSARLEKLDYTHESSQGAVGILLALLTSALIATGVILALHGACDARHDIGAIRDAIRNKSSNVKHTAKAVSQQS 384          
BLAST of jgi.p|Trimin1|175650 vs. uniprot
Match: A0A835Z836_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z836_9STRA)

HSP 1 Score: 219 bits (558), Expect = 1.810e-64
Identity = 138/333 (41.44%), Postives = 188/333 (56.46%), Query Frame = 1
Query:  118 QVLSGFLTITSLHFPAALEHLLDRLSFLTQYGFFLSCVVSMTFYTTLLLVTLVPLGLAAIIATHWYLVAWLRKRRPQNMRGN------RAPTVHKHSRVLIALAFYVFSITSGTIFQTFGCSILEEVGASGTSDLRADYSKEC-GTTEHRRYQAYAWCMIIVYPIGVPALFAWLLYKKRAPDHAGGTAETAAEQ-----------DVSSFLWQPYKPGLCRYWELVECLRRLALTGFLVFIMPGTAGQAAWSMLFAFASIVIFMAAKPHAELSQSRQYMLGGLIIYLSTTSARLEKLDYTHESSQGAVGILLALLTSALIATGVILALHGACD 1062
            Q+++GFL +T L      E+ + +L+ L    F   CV + TFY  LL +TL PL   A++   W L A  R+ R + + G       R   + KH    +AL F V+   S  IFQTF C  ++E+    T  LRADYS +C   +E+ RY AYA  M +VYP+GVPAL+A LL  KR    A   A  AA               SSFLW  YKP    +WE+VEC RR+ LTG LVFI+PG+AGQAA S+LFAF   +IFMA +PH E +  RQY+LG +I+Y ++ +A L K   +   SQ  VGI++ ++++ALI   V   L+G  D
Sbjct:   23 QLVAGFLEVTGLQLAPTFENFIHKLAILPNLSFAWGCVYNATFYEKLLAMTLGPLVAVALLGCSW-LWAVAREHRLRRVAGADAARAARLKALRKHWTAFLALTFLVYGTVSSIIFQTFACDYMQELD---TYYLRADYSIQCYNNSEYWRYFAYAMTMFVVYPLGVPALYALLLCFKRRQHQARQGAVAAAPSVQGLEPHWDLVHASSFLWAQYKPK-AEWWEMVECARRVVLTGVLVFILPGSAGQAAVSVLFAFLLTLIFMAVRPHREHAMQRQYLLGAVIVYFASMNALLIKSQVSGAQSQLVVGIVMIIISTALIVAAVAQTLYGVAD 350          
BLAST of jgi.p|Trimin1|175650 vs. uniprot
Match: A0A835ZPJ6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZPJ6_9STRA)

HSP 1 Score: 211 bits (536), Expect = 1.060e-61
Identity = 133/331 (40.18%), Postives = 183/331 (55.29%), Query Frame = 1
Query:  109 VVVQVLSGFLTITSLHFPAALEHLLDRLSFLTQYGFFLSCVVSMTFYTTLLLVTLVPLGLAAIIATHWYLVAWLRKRRPQNMRGNRAP------TVHKHSRVLIALAFYVFSITSGTIFQTFGCSILEEVGASGTSDLRADYSKECGTTEHRRYQAYAWCMIIVYPIGVPALFAWLLYKKR-------------APDHAGGTAETAAEQDVSSFLWQPYKPGLCRYWELVECLRRLALTGFLVFIMPGTAGQAAWSMLFAFASIVIFMAAKPHAELSQSRQYMLGGLIIYLSTTSARLE--KLDYTHE-SSQGAVGILLALLTSALIATGV 1035
            +VVQ+L GF+ IT L  P A E  LD+L+F+  +   + C+  + FY  LL  TL PL   A++   W L A    RR +   G  A        + +H  + + + F  F   S  +F+TF C   EE+G      LRADYS +C    +  Y AYA+C ++VYPIG+PALFA L+++KR               D  G  + +    + S FLW+ YK     YW++ EC RRL LTGF+ F++PG AGQAA SML +F  ++ FM A+PH E     QY+LG +IIYLST +A L   +LDY++E SS+  VG LL  L  ALI   V
Sbjct:    1 IVVQLLCGFVAITGLALPEAYEQFLDKLAFIADFTIMMGCIADLDFYDKLLATTLAPLMYIALVGCSW-LAAQHCVRRARLDAGETAAQLADLDALRRHWTLFLGILFLNFGSVSSVVFRTFACEHFEELGEWY---LRADYSIQCFANGYWWYAAYAFCAMLVYPIGIPALFAVLVWQKRKLRRCKANLLVPATQDSTGSPSRSDRLFEASGFLWEQYKTQ-AEYWKVFECARRLLLTGFIAFLLPGEAGQAAISMLLSFTLLLAFMIARPHRERQVHWQYLLGAVIIYLSTAAALLISLRLDYSNEPSSRRVVGWLLVALNVALITAAV 326          
BLAST of jgi.p|Trimin1|175650 vs. uniprot
Match: A0A835ZA22_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA22_9STRA)

HSP 1 Score: 209 bits (532), Expect = 4.650e-61
Identity = 129/314 (41.08%), Postives = 180/314 (57.32%), Query Frame = 1
Query:   91 SLRIPIVVVQVLSGFLTITSLHFPAALEHLLDRLSFLTQYGFFLSCVVSMTFYTTLLLVTLVPLGLAAIIATHWYLVAWLRKRRPQNMRGN------RAPTVHKHSRVLIALAFYVFSITSGTIFQTFGCSILEEVGASGTSDLRADYSKEC-GTTEHRRYQAYAWCMIIVYPIGVPALFAWLLYKKRAPDHAGGTAETAAEQD-------VSSFLWQPYKPGLCRYWELVECLRRLALTGFLVFIMPGTAGQAAWSMLFAFASIVIFMAAKPHAELSQSRQYMLGGLIIYLSTTSARLEKLDYTHESSQGAVG 990
            SL   ++  Q+++GFL +T L    A E+ + +L+ L    F   CV + TFY  LL++TL PL   A++   W L A +R+ R Q + G       R   + KH    +AL F V+   S TIFQTF C  ++E+    T  LRADYS +C    E+ RY AYA  M +VYP+GVPAL+A LL  +R   H       AA  +        SSFLW  YKP    +WE+VEC RR+ LTG LVFI+PG+AGQAA S+LFAF   ++FMA +P+ E +  RQY+LG +I+Y ++ +A L K   + + + G  G
Sbjct:    1 SLCAVLLPPQLVAGFLEVTGLQLAPAFENFIHKLATLLNLSFAWGCVYNATFYEQLLVMTLGPLVAVALLGCSW-LWALVREHRVQRVAGADAARAVRLKALRKHWTAFLALTFLVYGTVSSTIFQTFACDYVQELD---TYYLRADYSIQCYNNLEYWRYFAYAMTMFVVYPLGVPALYALLLCSRRRQQHQAQQGLVAAAPNSHWDLVHASSFLWAQYKPE-AEWWEIVECARRVVLTGVLVFILPGSAGQAAVSVLFAFFLALMFMAVRPYREHTMQRQYLLGAVIVYFASMNALLIKSQVSDDQATGCRG 309          
BLAST of jgi.p|Trimin1|175650 vs. uniprot
Match: A0A836CMM3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMM3_9STRA)

HSP 1 Score: 213 bits (541), Expect = 1.190e-60
Identity = 141/353 (39.94%), Postives = 185/353 (52.41%), Query Frame = 1
Query:   82 KLNSLRIPIVVVQVLSGFLTITSLHFPAALEHLLDRLSFLTQYGFFLSCVVSMTFYTTLLLVTLVPLGLAAIIATHWYLVAWLRKRRPQNMRGNRAPTVHKHSRVLIALAFYVFSITSGTIFQTFGCSILEEVGASGTSDLRADYSKECGTTEHRRYQAYAWCMIIVYPIGVPALFAWLLYKKR---------------------------APDHA---------GGTAETAAEQDV--SSFLWQPYKPGLCRYWELVECLRRLALTGFLVFIMPGTAGQAAWSMLFAFASIVIFMAAKPHAELSQSRQYMLGGLIIYLSTTSARLEKLDYTHES-SQGAVGILLALLTSALI 1023
            K +SLRI IVV+Q+L GF  IT L  P   E L+D+ +FL+ +   L C   +TF   LL+ TLVPLG++A++A                                           S  +F+TF C  L E GAS    LR DYS  C T EH RY  YA  M+ ++P+G+PAL+A LL+ KR                           +P H+         GG++  A++  V  S FLW+PY+ G   +WELVEC+RRL LTG LVFIMPGTAGQAA S LFAFA +++FM A+PH     S  YMLG LI+Y ST SA L  LD T ++ S   VG+LL +L+  L+
Sbjct:  126 KFDSLRILIVVMQILWGFQHITGLPLPEPFEQLVDKFTFLSDFALLLGCAFRITFSQRLLITTLVPLGISALLAI------------------------------------------SCVVFETFACDELPETGASY---LRTDYSVSCDTAEHARYSIYAAVMVFIHPVGIPALYAALLWSKRRQDCAXXXXXXXXXXXXSTSDSAMPISSPHHSQLRESVVGNGGSSIRASDALVRASDFLWRPYRDGAF-WWELVECVRRLLLTGLLVFIMPGTAGQAAVSTLFAFALLIVFMGARPHRSRGDSANYMLGCLILYFSTISALLLYLDVTGDTDSHSIVGVLLVVLSVLLL 432          
BLAST of jgi.p|Trimin1|175650 vs. uniprot
Match: A0A835YJS2_9STRA (TRP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJS2_9STRA)

HSP 1 Score: 205 bits (521), Expect = 1.320e-58
Identity = 136/378 (35.98%), Postives = 194/378 (51.32%), Query Frame = 1
Query:   94 LRIPIVVVQVLSGFLTITSLHFPAALEHLLDRLSFLTQYGFFLSCVVSMTFYTTLLLVTLVPLGLAAIIATHWYLVAWLRKRRPQNMRGNRAP------TVHKHSRVLIALAFYVFSITSGTIFQTFGCSILEEVGASGTSDLRADYSKECGTTEHRRYQAYAWCMIIVYPIGVPALFAWLLYKKRA--PDHAGGT--------AETAAEQDVSSFLWQPYKPGLCRYWELVECLRRLALTGFLVFIMPGTAGQAAWSMLFAFASIVIFMAAKPHAELSQSRQYMLGGLIIYLSTTSARLEKLDYTHE-SSQGAVGILLALLTSALIATGVILALHGACDA----------------RHDIGAIRDAIRNKSSNVKHT 1128
            LR+PIVV Q+L GF+ +T L +P     ++  +SF +     L CV  + FY  LL +TL PL +  ++   W L  W R ++ Q   G  A        + +H    +A  F VF + S  +F TF C  L+         LRADYS +C T+E+  Y  YA  M+ VYPIG+ AL++ LL++K     ++ G +        A  +   + S FLW+ Y      +WE+ EC+RRL +TGF+ FI+PGT  QA   ML AFAS++ ++  +PH +     QY+ G LI+YLST SA L+KLD   E  SQ  VGI+L +L+ A+IA  V     G   A                RH  G     +   SS+VK T
Sbjct:   43 LRLPIVVFQLLWGFMEVTGLAYPQVYATMIAYISFASDLTLVLGCVAELNFYQKLLAMTLAPLAVVVLLGASWLLACW-RAQQLQRSDGFEAAYLMHQEALRRHWTAFLAFTFLVFGVVSSVVFLTFVCEELDY--------LRADYSVQCYTSEYWAYAVYAAVMLFVYPIGITALYSVLLWRKSKLKMNNKGNSKIVRVASLAPRSRLVEASGFLWEQYTEET-PWWEIAECVRRLLITGFVAFILPGTVSQAVVGMLMAFASLMAYLMVRPHRDRRTYWQYITGALILYLSTMSALLQKLDIAKEPQSQAIVGIVLIVLSVAMIAAAVFQTFAGFTAAVVPKGTEGVTQEHHHHRHTSGCTEAEMDQVSSSVKAT 410          
BLAST of jgi.p|Trimin1|175650 vs. uniprot
Match: A0A836CE47_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE47_9STRA)

HSP 1 Score: 202 bits (514), Expect = 2.680e-58
Identity = 128/316 (40.51%), Postives = 181/316 (57.28%), Query Frame = 1
Query:   97 RIPIVVVQVLSGFLTITSLHFPAALEHL-----LDRLSFLTQYGFFLSCVVSMTFYTTLLLVTLVPLGLAAII-ATHWYLVAWLRKRRPQNMRGNRAPTVHKHSRVLIALAFYVFSITSGTIFQTFGCSILEEVGASGTSDLRADYSKECGTTEHRRYQAYAWCMIIVYPIGVPALFAWLLYKKRAPDHAGGTAETAAEQDVSSFLWQPYKPGLCRYWELVECLRRLALTGFLVFIMPGTAGQAAWSMLFAFASIVIFMAAKPHAELSQSRQYMLGGLIIYLSTTSARLEKLDYTHESSQGAVGILLALLTSALIA 1026
            R P++V+Q+L+ F++IT +  P  L++L     +D +S   ++     CV+ ++FY  LLL TLVPLG+A +I A   Y +      +P++          K   VL+  AF V+S  S TIFQTF C  LE  G  GT  LRADY+ +C T EH  Y  YA  M+++YP+G+PA+FAW++        A    E +A    +SFL +PY P  C YWE  ECLRRL L G LVFIMPGTAGQ A + +FA  + +++ + +PH E  +   Y LG  II  S  ++ L ++ Y  E SQ A+G LL  L   L+A
Sbjct:    1 RTPVIVMQILTQFVSITGVALP--LQYLDFLQVMDLISLDLRWLTSPGCVLHLSFYQRLLLTTLVPLGIAGVILAPRAYRLC-----KPRSAGAKLQRVCEKDLHVLLVFAFLVYSGVSLTIFQTFACDYLEYDGPDGTWYLRADYTIQCRTPEHTAYVTYAAIMLLMYPLGIPAIFAWMIRLG-----AADVRERSALASATSFLRKPYSPHAC-YWECAECLRRLLLAGLLVFIMPGTAGQTAMACVFAVLAGMVYESVRPHEETGEEFLYRLGYGIIAASMFTSLLIQVKYVDEYSQNAIGKLLIALNVILLA 303          
BLAST of jgi.p|Trimin1|175650 vs. uniprot
Match: A0A835ZGE0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGE0_9STRA)

HSP 1 Score: 214 bits (544), Expect = 4.340e-58
Identity = 151/416 (36.30%), Postives = 204/416 (49.04%), Query Frame = 1
Query:   88 NSLRIPIVVVQVLSGFLTITSLHFPAALEHLLDRLSFLTQYGFFLSCVVSMTFYTTLLLVTLVPLGLAAIIATHWYLVAWLRKRRPQNMRGN----------RAPTVHKHSRVLIALAFYVFSITSGTIFQTFGCSILEEVGASGTSDLRADYSKECGTTEHRRYQAYAWCMIIVYPIGVPALFAWLLYKKR----------------------AP-------------------------DHAGGTAETAAEQD----VSSFLWQPYKPGLCRYWELVECLRRLALTGFLVFIMPGTAGQAAWSMLFAFASIVIFMAAKPHAELSQSRQYMLGGLIIYLSTTSARLEKLDYTHES-SQGAVGILLALLTSALIATGVILALHGACD------ARHDIGAIRDAIRNKSSNVKHTA 1131
            N LRIPI+VVQ+++GF++IT L   A  E  + RL+ +  + F   C+    FY  LL+VTL PL   A++   W    W   R                   A  + KH   L+A  F V+  TS  IFQTF C+ +EE+  S    LRADYS  C    +  Y AYA  MI+VYP+GVPAL A LLY+KR                      AP                         + + G +E   E       SSF+W PY      +WELVEC RR+ LTG LVFI PGT GQAA SML AF +++ FMA +PH + +  +QY+LG LI+Y ++T+A L  L+ +  + SQ  VGILL +L+  LI    +  + GA D       R       DA+  +SS+ +  A
Sbjct:  646 NYLRIPIIVVQLVAGFMSITGLQLAAPFEAFIRRLAVIPDFTFIFGCIFHANFYQKLLVVTLAPLLPVALLGCSWL---WSLSRXXXXXXXXXXXXXXXXXAHARALRKHWTALLAFTFLVYGTTSSYIFQTFACASVEELDESY---LRADYSIRCYDRRYWPYFAYAMAMILVYPVGVPALNAVLLYRKRRLNKEAELQAAFARANAAAARRAPAAKMPSQTSQVALPSSHATVSQLELERSNGGSEREQEYSGLVGASSFIWAPYT-NAAEWWELVECARRVLLTGILVFIAPGTPGQAAVSMLMAFVALLAFMAVRPHRDHAMHQQYLLGALIVYFASTNALLLDLNISQSAQSQTVVGILLVVLSVVLIVAAAVQTVSGAVDFTKVLKVRRPTATKEDALPRRSSSQRAEA 1054          
BLAST of jgi.p|Trimin1|175650 vs. uniprot
Match: A0A835ZAX5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAX5_9STRA)

HSP 1 Score: 201 bits (511), Expect = 1.460e-56
Identity = 136/355 (38.31%), Postives = 194/355 (54.65%), Query Frame = 1
Query:   28 SPAAGTLLGGAYNTAARCKLNSLRIPIVVVQVLSGFLTITSLHFPAALEHLLDRLSFLTQYGFFLSCVVSMTFYTTLLLVTLVPLGLAAIIATHWYLVAWLRKRRPQNMRGNRAPTVHKHSRVL-------IALAFYVFSITSGTIFQTFGCSILEEVGASGTS-DLRADYSKECGTTEHRRYQAYAWCMIIVYPIGVPALFAWLLYKKRAPDHA----------GGTAETAAEQD---VSSFLWQPYKPGLCRYWELVECLRRLALTGFLVFIMPGTAGQAAWSMLFAFASIVIFMAAKPHAELSQSRQYMLGGLIIYLSTTSARLEKLDYTHESSQGAV--GILLALLTSALI 1023
            S +A  L   A N   +   NSLRIPIVVVQ+++G ++IT L    + E  +  L+ L    F   C+   +FY  LL +TL+PL     +   W L +  R  R Q    +RAP +  H+  L       +A  F+++S  S T+FQTF C  +EE  +   +  LRADYS  C    +    AY   M++VYPIG+PAL+A++L++KR  D            G    +  E      SSFLW  Y      +WE VEC RR+  TGFLVFIMPGTAGQAA S+L  F ++V F+A +P+ + ++  QY LG LI++LS+ +A L K+D + ++ Q  V  G LL +L+  LI
Sbjct:   73 SNSAMRLATRACNVHFKFNSNSLRIPIVVVQLIAGLVSITGLQLAPSFESFIHLLAILPDVSFAFGCIFDASFYERLLFMTLMPLVPVIFLGCSW-LWSMRRVHRLQET-ADRAPALAAHAESLRRHWTLFLAWTFFIYSTVSSTVFQTFACDKIEEWSSRPYNWYLRADYSITCYDQLYWCNFAYTAVMVLVYPIGIPALYAYVLHRKRCADQLERQYSDMSARGANTGSNGESSFIVASSFLWDQYTDE-AYWWEPVECARRVLFTGFLVFIMPGTAGQAAVSVLLTFVAVVSFLAVQPYRQRARHYQYFLGALIVFLSSFNALLLKVDASSDNGQSQVIIGALLIVLSVVLI 424          
BLAST of jgi.p|Trimin1|175650 vs. uniprot
Match: A0A835YI67_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI67_9STRA)

HSP 1 Score: 202 bits (515), Expect = 7.430e-55
Identity = 128/319 (40.13%), Postives = 181/319 (56.74%), Query Frame = 1
Query:   94 LRIPIVVVQVLSGFLTITSLHFPA-------ALEHLLDRLSFLTQYGFFLSCVVSMTFYTTLLLVTLVPLGLAAIIATHWYLVAWLRKRRPQNMRGNRAPTVHKHSRVLIALAFYVFSITSGTIFQTFGCSILEEVGASGTSDLRADYSKECGTTEHRRYQAYAWCMIIVYPIGVPALFAWLLYKKRAPDHAGGTAETAAEQDVSSFLWQPY-KPGLCRYWELVECLRRLALTGFLVFIMPGTAGQAAWSMLFAFASIVIFMAAKPHAELSQSRQYMLGGLIIYLSTTSARLEKLDYTHESSQGAVGILLALLTSALIA 1026
            LRIPI+V+Q+L+ F++IT L  P        A++ L   + +LT  G    C +++ FY  LL+ TL PL + A+I T    V+  R+ R             K     +   F +FS  S TIF+TF C  L   G  GTS LRADYS +C T EH  Y+ YA  MI+VYP G+PA++  L+ ++ A +     AE++     +SFLW+PY K GL  YWE +EC+RRL LTG LVFI  GTAGQ+A++ +FAF S V++   +PH        Y LG  I+++S  ++ L ++ +  E SQ  VGILL  L   L+A
Sbjct:  412 LRIPIIVLQLLTQFISITGLSLPPDYLKFLRAMDVLTLDMRWLTSPG----CALTIGFYQKLLISTLAPLAVVALIFTPRLCVSAARRGRRACGSAKLQRVAAKDFNAFLVFTFLIFSGVSLTIFETFACDFLRYDGPDGTSYLRADYSVQCFTPEHTAYRIYAAIMILVYPFGIPAMYC-LVLRRCAVEKGERRAESSRFATSASFLWRPYNKDGLAFYWESIECVRRLLLTGVLVFIDAGTAGQSAFACVFAFLSGVVYEQVRPHESSGDRSLYTLGYSIVFISMFTSLLLQVTFKDEQSQQVVGILLIALNVILLA 725          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|175650 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CM90_9STRA3.180e-274100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z836_9STRA1.810e-6441.44Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZPJ6_9STRA1.060e-6140.18Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835ZA22_9STRA4.650e-6141.08Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CMM3_9STRA1.190e-6039.94Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YJS2_9STRA1.320e-5835.98TRP domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A836CE47_9STRA2.680e-5840.51Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A835ZGE0_9STRA4.340e-5836.30Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZAX5_9STRA1.460e-5638.31Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YI67_9STRA7.430e-5540.13Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_128contigContig_128:297478..299004 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|175650|e_gw1.128.49.1
Max annot lvl2759|Eukaryota
EggNOG OGs2BFIX@1|root,2S176@2759|Eukaryota
Evalue4.06e-45
Seed ortholog2880.D8LRF9
Hectar predicted targeting categorysignal anchor
TranscriptId175972
TrackFilteredModels1
ProteinId175650
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|175650gene_15306Tribonema minus UTEX_B_3156 geneContig_128 297478..299004 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|175650Trimin1|175650|e_gw1.128.49.1Tribonema minus UTEX_B_3156 polypeptideContig_128 297478..299004 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_15306_2exon_15306_2Tribonema minus UTEX_B_3156 exonContig_128 297478..297971 -
exon_15306_1exon_15306_1Tribonema minus UTEX_B_3156 exonContig_128 298344..299004 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_15306CDS_15306Tribonema minus UTEX_B_3156 CDSContig_128 298344..299004 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_15306 ID=mRNA_15306|Name=jgi.p|Trimin1|175650|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1155bp|location=Sequence derived from alignment at Contig_128:297478..299004- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGTTTCTGCTGGCGGACCTCTTGCCATCCCCTGCTGCGGGAACGCTGCT
TGGTGGGGCCTACAACACAGCAGCAAGGTGCAAGCTGAACAGCCTCAGGA
TCCCCATTGTGGTCGTCCAGGTGCTTTCGGGCTTTCTGACTATCACCAGT
CTGCACTTCCCAGCGGCCTTGGAGCACCTCCTTGACCGGCTCAGCTTCCT
GACACAGTATGGCTTCTTCCTCAGTTGCGTGGTGTCAATGACCTTCTACA
CCACCCTGCTGCTGGTGACGCTTGTGCCGCTTGGCCTGGCTGCGATCATT
GCCACTCACTGGTATTTGGTAGCCTGGCTTCGCAAACGGCGGCCACAAAA
CATGCGCGGCAACCGTGCCCCCACCGTCCACAAGCACAGTCGTGTCTTGA
TAGCTTTGGCGTTTTATGTCTTTAGCATAACCTCTGGTACCATATTTCAA
ACTTTTGGCTGTTCCATACTGGAGGAGGTGGGTGCATCGGGCACGAGCGA
CCTGCGCGCTGACTACAGCAAGGAGTGCGGCACCACAGAGCACCGACGCT
ACCAGGCGTACGCCTGGTGCATGATCATTGTATACCCCATCGGTGTCCCA
GCACTGTTTGCTTGGCTCCTCTACAAGAAGCGAGCGCCTGACCACGCGGG
GGGCACTGCTGAAACCGCTGCGGAGCAGGATGTGTCATCTTTTTTGTGGC
AGCCATATAAGCCCGGCCTCTGCCGCTATTGGGAGCTGGTGGAGTGCCTG
AGGAGGCTGGCGCTCACAGGTTTTCTTGTGTTCATCATGCCTGGCACCGC
AGGGCAGGCGGCATGGTCCATGCTGTTTGCCTTCGCTAGCATTGTCATCT
TCATGGCGGCAAAACCACATGCGGAGCTGTCTCAGTCTCGCCAGTATATG
TTGGGCGGTCTCATTATATACCTCAGCACGACATCTGCGCGTCTTGAGAA
GCTGGACTACACCCATGAATCGTCACAGGGCGCGGTCGGCATCCTGTTGG
CTCTTCTAACCAGCGCGCTCATTGCCACTGGTGTCATTTTGGCCCTGCAT
GGCGCTTGTGATGCGCGGCATGACATTGGCGCCATCCGTGACGCCATCCG
CAACAAGAGCAGCAATGTGAAGCACACTGCAAAGGCTGTGTCTCAGCAGT
CTTGA
back to top

protein sequence of jgi.p|Trimin1|175650

>Trimin1|175650|e_gw1.128.49.1 ID=Trimin1|175650|e_gw1.128.49.1|Name=jgi.p|Trimin1|175650|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=385bp
MFLLADLLPSPAAGTLLGGAYNTAARCKLNSLRIPIVVVQVLSGFLTITS
LHFPAALEHLLDRLSFLTQYGFFLSCVVSMTFYTTLLLVTLVPLGLAAII
ATHWYLVAWLRKRRPQNMRGNRAPTVHKHSRVLIALAFYVFSITSGTIFQ
TFGCSILEEVGASGTSDLRADYSKECGTTEHRRYQAYAWCMIIVYPIGVP
ALFAWLLYKKRAPDHAGGTAETAAEQDVSSFLWQPYKPGLCRYWELVECL
RRLALTGFLVFIMPGTAGQAAWSMLFAFASIVIFMAAKPHAELSQSRQYM
LGGLIIYLSTTSARLEKLDYTHESSQGAVGILLALLTSALIATGVILALH
GACDARHDIGAIRDAIRNKSSNVKHTAKAVSQQS*
back to top

mRNA from alignment at Contig_128:297478..299004-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_15306 ID=mRNA_15306|Name=jgi.p|Trimin1|175650|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1527bp|location=Sequence derived from alignment at Contig_128:297478..299004- (Tribonema minus UTEX_B_3156 )
ATGTTTCTGCTGGCGGACCTCTTGCCATCCCCTGCTGCGGGAACGCTGCT TGGTGGGGCCTACAACACAGCAGCAAGGTGCAAGCTGAACAGCCTCAGGA TCCCCATTGTGGTCGTCCAGGTGCTTTCGGGCTTTCTGACTATCACCAGT CTGCACTTCCCAGCGGCCTTGGAGCACCTCCTTGACCGGCTCAGCTTCCT GACACAGTATGGCTTCTTCCTCAGTTGCGTGGTGTCAATGACCTTCTACA CCACCCTGCTGCTGGTGACGCTTGTGCCGCTTGGCCTGGCTGCGATCATT GCCACTCACTGGTATTTGGTAGCCTGGCTTCGCAAACGGCGGCCACAAAA CATGCGCGGCAACCGTGCCCCCACCGTCCACAAGCACAGTCGTGTCTTGA TAGCTTTGGCGTTTTATGTCTTTAGCATAACCTCTGGTACCATATTTCAA ACTTTTGGCTGTTCCATACTGGAGGAGGTGGGTGCATCGGGCACGAGCGA CCTGCGCGCTGACTACAGCAAGGAGTGCGGCACCACAGAGCACCGACGCT ACCAGGCGTACGCCTGGTGCATGATCATTGTATACCCCATCGGTGTCCCA GCACTGTTTGCTTGGCTCCTCTACAAGAAGCGAGCGCCTGACCACGCGGG GGGCACTGCTGGTGCTGCCACTGCCACCGCCGCCAAAATTACTGCAGCCG ATGGCACATTGCCAAGCTCGCGTCATGTCTTCAATACTGCTGTAAGTGCA CGCCCCAAGGAGCTCATGCACCCGATGCGGGCGCCGTCTTCCATAAAAGC TGGACAAGCACTCAGCCTTAGGTCCCCCAATAGTACTAGTGATAGCATGG CGGAAGAAGCGCCAGTGCGGCAGGGCAGCACCAGTGCTGTGACTGGTGTT GGGGCAGTAGCTGAGCTGGCGCCTATGGACCGTATCAAATTTGAGATCGA AGGCATGGAAAGGGCCCATACGGCCAACATGTCTGGTATGCTGACACAGC AGGTTGATACATTGGCTTGTGCGCCACAAGCAGAAACCGCTGCGGAGCAG GATGTGTCATCTTTTTTGTGGCAGCCATATAAGCCCGGCCTCTGCCGCTA TTGGGAGCTGGTGGAGTGCCTGAGGAGGCTGGCGCTCACAGGTTTTCTTG TGTTCATCATGCCTGGCACCGCAGGGCAGGCGGCATGGTCCATGCTGTTT GCCTTCGCTAGCATTGTCATCTTCATGGCGGCAAAACCACATGCGGAGCT GTCTCAGTCTCGCCAGTATATGTTGGGCGGTCTCATTATATACCTCAGCA CGACATCTGCGCGTCTTGAGAAGCTGGACTACACCCATGAATCGTCACAG GGCGCGGTCGGCATCCTGTTGGCTCTTCTAACCAGCGCGCTCATTGCCAC TGGTGTCATTTTGGCCCTGCATGGCGCTTGTGATGCGCGGCATGACATTG GCGCCATCCGTGACGCCATCCGCAACAAGAGCAGCAATGTGAAGCACACT GCAAAGGCTGTGTCTCAGCAGTCTTGA
back to top

Coding sequence (CDS) from alignment at Contig_128:297478..299004-

>mRNA_15306 ID=mRNA_15306|Name=jgi.p|Trimin1|175650|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1155bp|location=Sequence derived from alignment at Contig_128:297478..299004- (Tribonema minus UTEX_B_3156 )
ATGTTTCTGCTGGCGGACCTCTTGCCATCCCCTGCTGCGGGAACGCTGCT
TGGTGGGGCCTACAACACAGCAGCAAGGTGCAAGCTGAACAGCCTCAGGA
TCCCCATTGTGGTCGTCCAGGTGCTTTCGGGCTTTCTGACTATCACCAGT
CTGCACTTCCCAGCGGCCTTGGAGCACCTCCTTGACCGGCTCAGCTTCCT
GACACAGTATGGCTTCTTCCTCAGTTGCGTGGTGTCAATGACCTTCTACA
CCACCCTGCTGCTGGTGACGCTTGTGCCGCTTGGCCTGGCTGCGATCATT
GCCACTCACTGGTATTTGGTAGCCTGGCTTCGCAAACGGCGGCCACAAAA
CATGCGCGGCAACCGTGCCCCCACCGTCCACAAGCACAGTCGTGTCTTGA
TAGCTTTGGCGTTTTATGTCTTTAGCATAACCTCTGGTACCATATTTCAA
ACTTTTGGCTGTTCCATACTGGAGGAGGTGGGTGCATCGGGCACGAGCGA
CCTGCGCGCTGACTACAGCAAGGAGTGCGGCACCACAGAGCACCGACGCT
ACCAGGCGTACGCCTGGTGCATGATCATTGTATACCCCATCGGTGTCCCA
GCACTGTTTGCTTGGCTCCTCTACAAGAAGCGAGCGCCTGACCACGCGGG
GGGCACTGCTGAAACCGCTGCGGAGCAGGATGTGTCATCTTTTTTGTGGC
AGCCATATAAGCCCGGCCTCTGCCGCTATTGGGAGCTGGTGGAGTGCCTG
AGGAGGCTGGCGCTCACAGGTTTTCTTGTGTTCATCATGCCTGGCACCGC
AGGGCAGGCGGCATGGTCCATGCTGTTTGCCTTCGCTAGCATTGTCATCT
TCATGGCGGCAAAACCACATGCGGAGCTGTCTCAGTCTCGCCAGTATATG
TTGGGCGGTCTCATTATATACCTCAGCACGACATCTGCGCGTCTTGAGAA
GCTGGACTACACCCATGAATCGTCACAGGGCGCGGTCGGCATCCTGTTGG
CTCTTCTAACCAGCGCGCTCATTGCCACTGGTGTCATTTTGGCCCTGCAT
GGCGCTTGTGATGCGCGGCATGACATTGGCGCCATCCGTGACGCCATCCG
CAACAAGAGCAGCAATGTGAAGCACACTGCAAAGGCTGTGTCTCAGCAGT
CTTGA
back to top