mRNA_15304 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|352686 vs. uniprot
Match: A0A835ZE89_9STRA (EXS family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE89_9STRA) HSP 1 Score: 1574 bits (4076), Expect = 0.000e+0 Identity = 844/844 (100.00%), Postives = 844/844 (100.00%), Query Frame = 1
Query: 1 MVQFGLKLQDNIVAKWADHYMDYKKLKTELTRRYKAWEAAALADAKQNKLRLLAASLGVKSPGKLEAKASPGRGRSPKRGNSGGVEEEESFKSLIIAEIDKVXXXXXXXXXXXXXXYVRTRDSLGKELDMLLVGELSGPFRMRRPTLGSSDSEQLESMRGFSEDYYDGNSMSRATGSFRMKKSHIFASQHCVTPQLQAASRETSAADALESDSLQRAMSEIYRDLTLLRNFAIINYTAAVKLLKKHDKKLAKPKGPRKRTTSTSSLHSMGMSFRGLQPQAPKNTDAAILAAALKPSDAITADVMAYLHRQDFYALKRLTQEKQFHSDFYTLKRLDEXXXXXXXXXEVTRMCEKEFAIMFCSGNVSQARGMLLPQKTDERFDWAQFQLGYHLGIAAVLAFWVVWDCCVEVFKRGEDVSVMGQPAFRVYRGVAGLLLLHWAWGFSVLVWTRTRINFIYLFELDPRHQMTWCIXXXXXXXXXXXXQPKXXXXXXXXXXXXXXXAPPISIFNDAALETVVFLANLLAYYKAQMGLPTRSFVPPGIYPLVLCLYTAKRLIYPMDVKMEVDFFATYCADVLTSSVKTVLDMAWTIGFFLSGDFLMDRHVWMARHKSNSWEQQFWYVSVLVPALCVLPLWLRFQQCLRRYHDTGKRFPNLANALKYAMAQTVSIFGVFRPPAPTIDVYNGIWMALYIVSSLYSFWWDIKQDWGLGHRKHGWLSERRMHSRVWVYWATIAVDLILRFNWLYSFIPPGTSHFFIVPNYVTTVVIMLEIFRRTLWGFFRLENEHLRNTEGYRTIDVVPLHFHTAKTITEKKSKGGAWVLGEVFLVAASAIVVTVAAVVVARNHD 2532
MVQFGLKLQDNIVAKWADHYMDYKKLKTELTRRYKAWEAAALADAKQNKLRLLAASLGVKSPGKLEAKASPGRGRSPKRGNSGGVEEEESFKSLIIAEIDKVXXXXXXXXXXXXXXYVRTRDSLGKELDMLLVGELSGPFRMRRPTLGSSDSEQLESMRGFSEDYYDGNSMSRATGSFRMKKSHIFASQHCVTPQLQAASRETSAADALESDSLQRAMSEIYRDLTLLRNFAIINYTAAVKLLKKHDKKLAKPKGPRKRTTSTSSLHSMGMSFRGLQPQAPKNTDAAILAAALKPSDAITADVMAYLHRQDFYALKRLTQEKQFHSDFYTLKRLDEXXXXXXXXXEVTRMCEKEFAIMFCSGNVSQARGMLLPQKTDERFDWAQFQLGYHLGIAAVLAFWVVWDCCVEVFKRGEDVSVMGQPAFRVYRGVAGLLLLHWAWGFSVLVWTRTRINFIYLFELDPRHQMTWCIXXXXXXXXXXXXQPKXXXXXXXXXXXXXXXAPPISIFNDAALETVVFLANLLAYYKAQMGLPTRSFVPPGIYPLVLCLYTAKRLIYPMDVKMEVDFFATYCADVLTSSVKTVLDMAWTIGFFLSGDFLMDRHVWMARHKSNSWEQQFWYVSVLVPALCVLPLWLRFQQCLRRYHDTGKRFPNLANALKYAMAQTVSIFGVFRPPAPTIDVYNGIWMALYIVSSLYSFWWDIKQDWGLGHRKHGWLSERRMHSRVWVYWATIAVDLILRFNWLYSFIPPGTSHFFIVPNYVTTVVIMLEIFRRTLWGFFRLENEHLRNTEGYRTIDVVPLHFHTAKTITEKKSKGGAWVLGEVFLVAASAIVVTVAAVVVARNHD
Sbjct: 1 MVQFGLKLQDNIVAKWADHYMDYKKLKTELTRRYKAWEAAALADAKQNKLRLLAASLGVKSPGKLEAKASPGRGRSPKRGNSGGVEEEESFKSLIIAEIDKVXXXXXXXXXXXXXXYVRTRDSLGKELDMLLVGELSGPFRMRRPTLGSSDSEQLESMRGFSEDYYDGNSMSRATGSFRMKKSHIFASQHCVTPQLQAASRETSAADALESDSLQRAMSEIYRDLTLLRNFAIINYTAAVKLLKKHDKKLAKPKGPRKRTTSTSSLHSMGMSFRGLQPQAPKNTDAAILAAALKPSDAITADVMAYLHRQDFYALKRLTQEKQFHSDFYTLKRLDEXXXXXXXXXEVTRMCEKEFAIMFCSGNVSQARGMLLPQKTDERFDWAQFQLGYHLGIAAVLAFWVVWDCCVEVFKRGEDVSVMGQPAFRVYRGVAGLLLLHWAWGFSVLVWTRTRINFIYLFELDPRHQMTWCIXXXXXXXXXXXXQPKXXXXXXXXXXXXXXXAPPISIFNDAALETVVFLANLLAYYKAQMGLPTRSFVPPGIYPLVLCLYTAKRLIYPMDVKMEVDFFATYCADVLTSSVKTVLDMAWTIGFFLSGDFLMDRHVWMARHKSNSWEQQFWYVSVLVPALCVLPLWLRFQQCLRRYHDTGKRFPNLANALKYAMAQTVSIFGVFRPPAPTIDVYNGIWMALYIVSSLYSFWWDIKQDWGLGHRKHGWLSERRMHSRVWVYWATIAVDLILRFNWLYSFIPPGTSHFFIVPNYVTTVVIMLEIFRRTLWGFFRLENEHLRNTEGYRTIDVVPLHFHTAKTITEKKSKGGAWVLGEVFLVAASAIVVTVAAVVVARNHD 844
BLAST of jgi.p|Trimin1|352686 vs. uniprot
Match: A0A835YP28_9STRA (EXS family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP28_9STRA) HSP 1 Score: 773 bits (1995), Expect = 2.050e-268 Identity = 436/820 (53.17%), Postives = 509/820 (62.07%), Query Frame = 1
Query: 1 MVQFGLKLQDNIVAKWADHYMDYKKLKTELTRRYKAWEAAALADAKQNKLRLLAASLGVKSPGKLEAKASPGRGRSPKRGNSGGV------EEEESFKSLIIAEIDKVXXXXXXXXXXXXXXYVRTRDSLGKELDMLLVGELSGPFRMRRPTLGSSDSEQLESMRGFSEDYYDGNSMSRATGSFRMKKSHIFASQHCVTPQLQAASRETSAADALESDSLQRAMSEIYRDLTLLRNFAIINYTAAVKLLKKHDKKLA-KPKGPRKRTTSTSSLHSMGMSFRGLQPQAPKNTDAAILAAALKPSDAITADVMAYLHRQDFYALKRLTQEKQFHSDFYTLKRLDEXXXXXXXXXEVTRMCEKEFAIMFCSGNVSQARGMLLPQKTDERFDWAQFQLGYHLGIAAVLAFWVVWDCCVEVFKRGEDVSVMGQPAFRVYRGVAGLLLLHWAWGFSVLVWTRTRINFIYLFELDPRHQMTWCIXXXXXXXXXXXXQPKXXXXXXXXXXXXXXXAPPISIFNDAALETVVFLANLLAYYKAQMGLPTRSFVPPGIYPLVLCLYTAKRLIYPMDVKMEVDFFATYCADVLTSSVKTVLDMAWTIGFFLSGDFLMDRHVWMARHKSNSWEQQFWYVSVLVPALCVLPLWLRFQQCLRRYHDTGKRFPNLANALKYAMAQTVSIFGVFRPPAPTIDVYNGIWMALYIVSSLYSFWWDIKQDWGLGHRKHGWLSERRMHSRVWVYWATIAVDLILRFNWLYSFIPPGTSHFFIVPNYVTTVVIMLEIFRRTLWGFFRLENEHLRNTEGYRTIDVVPLHFHTAKTITEKKSK 2439
MVQFGLKLQDNIVAKWADHY+DYKKLK L+++ KAWEA LA AK K +LL G L +SP G SPK+ + G E F+SL+++E+DKV Y RT D L KELD LL+GE + G D +E+ E Y Q+AMS+IYRDLTLLRNFAI+NYT VK+LKKHDKKLA K + + +ST + S+ + Q DAAILAAA KP I+ +V+A++H+QDFY+ RL +V R CE+EFA++FC G+++QARGMLLPQK DE DW QFQLGYHLGIAA+LAFWVVWDCCVEV K+GEDVSVMGQPAFRV+R VAGLLLLHWAW FSVL WTRTRINF+YLFELDPRHQ +PP+++FND A ETVVFLA LLAYYKAQ+G F+P G YPL LCLY K+L P+ VK+EVDFFATYCADVLTSSVKT+LD AWT+ FF SGDFL+ R W+ R + WE FWY SVLVPALC+LPLWLRFQQCL+RYHDTGKRFPNLANAL +SLYSFWWD++QDWGLGHR+ G+LS+RRM SR W Y+ATIAVDL+LRFNWLYSFIPPG SHFFI+PNYVTT+VI+LEIFRRTLWGFFRLENEHLRNTEGYR+IDVVPLHF T K K K
Sbjct: 132 MVQFGLKLQDNIVAKWADHYLDYKKLKVVLSKKSKAWEAGVLAAAKA-KAKLL-------RKGALSRLSSPA-GPSPKKLGTAGDGKAFFNEANLPFESLVLSEVDKVERF-----------YCRTVDRLAKELDALLLGEQAAQE-------GDGDRGGVEASTTVVEVDY------------------------------------------------QQAMSDIYRDLTLLRNFAILNYTGCVKILKKHDKKLAPSTKDAKPKPSSTGGVSSVPKT-----KQKRPGKDAAILAAAPKPCRPISEEVLAHVHKQDFYSCARLD--------------------------DVMRACEREFALLFCGGDLAQARGMLLPQKLDEAIDWGQFQLGYHLGIAAILAFWVVWDCCVEVAKKGEDVSVMGQPAFRVFRAVAGLLLLHWAWAFSVLYWTRTRINFLYLFELDPRHQ-----------------------------------SPPLALFNDVAGETVVFLACLLAYYKAQVG-ALDHFIPGGYYPLALCLYVFKKLFLPLSVKLEVDFFATYCADVLTSSVKTLLDWAWTLMFFASGDFLLSRKKWVVRPPRHIWEHSFWYGSVLVPALCILPLWLRFQQCLKRYHDTGKRFPNLANAL----------------------------------NSLYSFWWDVRQDWGLGHRQFGYLSDRRMQSRRWAYYATIAVDLVLRFNWLYSFIPPGKSHFFILPNYVTTLVIILEIFRRTLWGFFRLENEHLRNTEGYRSIDVVPLHFTTTKKADLSKVK 775
BLAST of jgi.p|Trimin1|352686 vs. uniprot
Match: A0A7S4MNN5_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MNN5_9STRA) HSP 1 Score: 394 bits (1013), Expect = 2.170e-120 Identity = 292/926 (31.53%), Postives = 435/926 (46.98%), Query Frame = 1
Query: 1 MVQFGLKLQDNIVAKWADHYMDYKKLKTELTRRYKAWEAA-ALADAKQNKLRLLAASLGVKSPGKLEAKASPGRGRSPKRGNSGGVEEEESFKSLIIAEIDKVXXXXXXXXXXXXXXYVRTRDSLGKELDMLLVGELSGPFRMRRPTLGSSDSEQLESMRGFSED--------------------YYDGNSMSRATGSFRMKKSHIFASQHCVTPQLQAASRETSAADALESDSLQR--AMSEIYRDL-------TLLRNFAIINYTAAVKL--LKKHDKKLAKPKGPRKRTTSTSSLHSMGMSFRGLQPQAPKNTDAAILAAALKPSDAITADVMAYLHRQDFYALKRLTQE--------KQFHSDFYTLKRL-------DEXXXXXXXXXEVTRMCEKEFAIMFCSGNVSQARGMLLPQKTDE-RFDWAQFQLGYHLGIAAVLAFWVVWDCCVEVFKRGEDVSVMGQPAFRVYRGVAGLLLLHWAWGFSVLVWTRTRINFIYLFELDPRHQMTWCIXXXXXXXXXXXXQPKXXXXXXXXXXXXXXXAPPISIFNDAALETVVFLANLLAYYKAQM-GLPTRSFVPPGIYPLVLCLYTAKRLIYPMDVKMEV---------------DFFATYCADVLTSSVKTVLDMAWTIGFFLSGDFLMDRHVWMARHKSNSWEQQFWYVSVLVPALCVLPLWLRFQQCLRRYHDTGKRFPNLANALKYAMAQTVSIFGVFRP------------------PAPTIDVYNGIWMALYIVSSLYSFWWDIKQDWGLGHRKHGWLSERRMHSRVWVYWATIAVDLILRFNWLYSFIPPGTSHFFIVPNYVTTVVIMLEIFRRTLWGFFRLENEHLRNTEGYRTIDVVPLHFHTAKTITEKKSKG--GAWVLGEVFLVAASAIVVTVAAVVVARN 2526
MV+FGLKL+DN V +W+ +Y+DY+KLK+ + + KA EA +LA + + A+L K+ + S + + G+S + ++ S++ A + + +E LL S + +RP G +++ S ED Y+ GN +S+ S + + C+ +++ + S A ES+ QR + E D T R ++ +KL + KH P + S +G F +P+ T +K +D+I +++ LHR+ L K+F+ F K L D ++ E+ +A FC N +AR +LP++ D DW+Q +LGY +G+ ++LA WV WDC + G + ++ G+ AF V+R GLLLLHW WG SV VWTR RIN+I+LF+ +PR T P++IFN+ ET+VF +L YYK+ +P +P G YP +L LYT K+LI+P + + F TY D+ TS VK D+ WT+ F SG+FL ++ + W+ FWY +V++P +C+ PLW+RF QCLRRY DTGKR+PNLANA KYAM+QTV++FG F P + +++ WM L+I SSLYSF WD+ DWGLG ++ L R M Y+ I +DL+LRF W+ + +PP + F +P Y+T + + LE+ RRTLWGFFRLE+EH NTEGYR +D VPLHF T KK K G VL EV V+A I V+V +V+ A+
Sbjct: 1 MVEFGLKLEDNKVEEWSGNYIDYEKLKSLIKKANKAAEARDSLAQRRPEVAAEVTAALDAGIHPKMIKQGSSSDPQLSRHGDSDD-DLSKATGSVVPARTCGSSGSVVISEISVGIELSKNQGGQQEEQARLLERTPSKTYGSQRPFRGLKLADKQGSFSSIGEDMISRSDSTHSLGGALERIKGYFRGNYVSKLAESMQEVDVRLALFSKCIHEEVE---KVNSFYMATESEYHQRLEVLIESVGDKKPKGDSRTHNRRLSLTEREGLMKLKDVVKHRLHTVIPAA----SQDVPSNSPLGDYFSDEEPE----TGRVDKKQQIKEADSIKRELID-LHRRTTLLLNFSIMNYTGFVKIVKKFNKTFPEQKDLFSHLVQKDNVCHEGKEAEQLVGKMERLYAKWFCDDNAREARAQMLPKRGDGLSMDWSQLRLGYRMGMCSILALWVCWDCIWGLVADG-NTTIGGRSAFPVFRACGGLLLLHWFWGTSVYVWTRYRINYIFLFDFNPRIVDT-----------------------------------PMNIFNETVDETLVFFICMLLYYKSGAHDMP--EMIPAGGYPFLLVLYTGKKLIFPWRTRAPMWKTIWEVISAPLYSPKFIHTYVGDIFTSMVKVFQDILWTLCFVFSGNFLQPENL-KTDKSPHPWQHAFWYKNVMIPLICLFPLWIRFNQCLRRYTDTGKRWPNLANAFKYAMSQTVTLFGAFHPLYMLHMNKKMLYEAEIALESNANNIFQVFWMGLFICSSLYSFTWDVYMDWGLGKPQYQGLGPRLMFPNRLHYYGVIVIDLVLRFMWVSTLLPPQSGASFELPQYLTALTMSLELMRRTLWGFFRLEHEHRANTEGYRRVDFVPLHFSTGHDHKYKKDKERIGWHVLAEVCTVSAIVIAVSVTSVIAAQK 874
BLAST of jgi.p|Trimin1|352686 vs. uniprot
Match: A0A1Z5JJL2_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JJL2_FISSO) HSP 1 Score: 385 bits (988), Expect = 2.960e-117 Identity = 211/512 (41.21%), Postives = 291/512 (56.84%), Query Frame = 1
Query: 1063 FAIMFCSGNVSQARGMLLPQKTDE-RFDWAQFQLGYHLGIAAVLAFWVVWDCCVEVFKRGEDVSVMGQPAFRVYRGVAGLLLLHWAWGFSVLVWTRTRINFIYLFELDPRHQMTWCIXXXXXXXXXXXXQPKXXXXXXXXXXXXXXXAPPISIFNDAALETVVFLANLLAYYKAQMGLPTRSFVPPGIYPLVLCLYTAKRLIYPMDVKMEV---------------DFFATYCADVLTSSVKTVLDMAWTIGFFLSGDFLMDRHVWMARHKSNSWEQQFWYVSVLVPALCVLPLWLRFQQCLRRYHDTGKRFPNLANALKYAMAQTVSIFGVFRPPAPTID----VYNGIWMALYIVSSLYSFWWDIKQDWGLGHRKHGWLSERRMHSRVWVYWATIAVDLILRFNWLYSFIPPGTSHFFIVPNYVTTVVIMLEIFRRTLWGFFRLENEHLRNTEGYRTIDVVPLHFHTAKTITEKKSKG--GAWVLGEVFLVAASAIVVTVAAV-VVARNH 2529
FA FC ++++AR +LP+K D + DW+Q +LGY +G+ +VLA WV WDC + + G ++ G+ AF V+RG GLLL+ W WG SV VWTR R+N+IY+ +LDP PI+IFND+ +T+ +L +L YYKA + +F P GI+P + Y RLI+P+ +++ + F+ +Y D+ TS VK D+AWT GF LSGDFL+ R +++W WY +L+P L + PLW RF QCLRRY DTG RFP+LANA KYA+ QTV++FG F P T ++ W ++ SSLYSF+WD+ DWGLG + +L R M+ R +Y+ I +DL+LRF W+ + +PP + F +P Y+T V +MLE+FRRT+WGF RLENEH NT GYR + VPLHF T T K+K G VL EV V + +VV AAV VVA H
Sbjct: 355 FANWFCDRDINEARAQMLPKKGDGLQMDWSQLRLGYRMGMCSVLALWVCWDCIWGMLQNGST-TIGGRTAFPVFRGFFGLLLVQWFWGASVWVWTRYRVNYIYIMDLDPH-----------------------------------LVRSPIAIFNDSVDDTLFYLITMLLYYKAGVHDIPGNF-PAGIFPAIAVCYALYRLIFPLQLRIPMWTTIWEVITAPMTSPAFYHSYIGDIFTSMVKVFQDLAWTTGFMLSGDFLISED--SKRATNHTWSHASWYKQILIPLLTLAPLWFRFNQCLRRYMDTGNRFPHLANAFKYALTQTVTLFGAFHPLYMTNKHESALFQLFWTCAFVSSSLYSFFWDVYMDWGLGRPEFRFLGPRLMYPRRKLYFVIIGLDLVLRFAWVLTLVPPESGAAFALPAYLTAVSMMLELFRRTVWGFLRLENEHRSNTAGYRRVGFVPLHFATGHTHDYNKAKEMRGTSVLIEVAFV--TIVVVAAAAVSVVAAQH 825
BLAST of jgi.p|Trimin1|352686 vs. uniprot
Match: A0A6H5KYB6_9PHAE (EXS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYB6_9PHAE) HSP 1 Score: 363 bits (932), Expect = 7.460e-115 Identity = 186/361 (51.52%), Postives = 238/361 (65.93%), Query Frame = 1
Query: 1507 PISIFNDAALETVVFLANLLAYYKAQMGLPTRSFVPPGIYPLVLCLYTAKRLIYPMDVKME---------------VDFFATYCADVLTSSVKTVLDMAWTIGFFLSGDFLMDRHVWMARHKSNSWEQQFWYVSVLVPALCVLPLWLRFQQCLRRYHDTGKRFPNLANALKYAMAQTVSIFGVFRPPAPTIDVYNGIWMALYIVSSLYSFWWDIKQDWGLGHRKHGWLSERRMHSRVWVYWATIAVDLILRFNWLYSFIPPGTS-----HFFIVPNYVTTVVIMLEIFRRTLWGFFRLENEHLRNTEGYRTIDVVPLHFHTAKTITEKKSKGGAWVLGEVFLVAASAIVVTVAAVVVARNH 2529
P+ +FN+ A ETVV+LANLL YYK M +P G PL+LC Y ++IYP+ E VDFFATY DV+TSSVKT D+AWT FFLSGDFL++ + K SW+ YV++++PALCVLPLWLRFQQC+RRYHDT KRFP+LAN LKY+M+ TV++FGVF PP T +W +Y+VS+LY+F WD+ QDWGLGH +G+L ++R+ R VY+A + +DL+LRFNWLYS IPPG + H +P +TT VI+ E RRT+WGFFR+ENEHL NTEGYR+ D VPLHF T T EK K G V+GEV V I + AA++ AR+
Sbjct: 9 PLQVFNNVAAETVVYLANLLLYYKILMN-RFPPILPAGCLPLLLCFYVIFQVIYPVHKSKEFWRVIIRSLVAPLCKVDFFATYVTDVMTSSVKTTQDIAWTFCFFLSGDFLLNLEDY--HRKGLSWQHSAVYVNLVIPALCVLPLWLRFQQCVRRYHDTQKRFPHLANCLKYSMSFTVALFGVFSPPHSTTTAVKILWFVMYVVSTLYTFSWDVLQDWGLGHPMYGFLRKKRLFPRSSVYYAAVVLDLVLRFNWLYSLIPPGHNPLPFMHSSTLPVVITTNVIVCEFLRRTMWGFFRVENEHLNNTEGYRSTDHVPLHF-TTPTAREKPRKKGVLVIGEVLAVTVGGIAMATAAIMAARDQ 365
BLAST of jgi.p|Trimin1|352686 vs. uniprot
Match: W7TDD1_9STRA (Xenotropic and polytropic murine leukemia virus receptor xpr1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TDD1_9STRA) HSP 1 Score: 376 bits (965), Expect = 2.340e-114 Identity = 235/666 (35.29%), Postives = 332/666 (49.85%), Query Frame = 1
Query: 628 ESDSLQRAMSEIYRDLTLLRNFAIINYTAAVKLLKKHDKKLAKPKGPRKRTTSTSSLHSMGMSFRGLQPQAPKNTDAAILAAALKPSDAITADVMAYLHRQDFYALKRLTQEKQFHSDFYTLKRLDEXXXXXXXXXEVTRMCEKEFAIMFCSGNVSQARGMLLPQKTDERFDWAQFQLGYHLGIAAVLAFWVVWDCCVEVFKRGEDVSVMGQPAFRVYRGVAGLLLLHWAWGFSVLVWTRTRINFIYLFELDPRHQMTWCIXXXXXXXXXXXXQPKXXXXXXXXXXXXXXXAPPISIFNDAALETVVFLANLLAYYKAQMGLPTRSFVPPGIYPLVLCLYTAKRLIYPMDVK---------------MEVDFFATYCADVLTSSVKTVLDMAWTIGFFLSGDFLMDRHVWMARHKSNSWEQQFWYVSVLVPALCVLPLWLRFQQCLRRYHDTGKRFPNLANALKYAMAQTVSIFGVFRP--------------PAPTIDVYNGIWMALYIVSSLYSFWWDIKQDWGLGHRKHGWLSERRMHSRVWVYWATIAVDLILRFNWLYSFIPPGTSHFFIVPNYVTTVVIMLEIFRRTLWGFFRLENEHLRNTEGYRTIDVVPLHFHTAKT--ITEKKSKGGAWVLGEVFLVAASAIVVTVAAVVVARNHD 2532
E + ++ + + R+LTLL NF IINYT +K+LKKHDK L PS + A V+ L + F+ RL K EVT + FA +FC+ + +QA MLLP++ D+ QLGY LG+AA LA WVVWDC V+V K G+ +++ + AF V+R V GLLLLHW WG RINF+YL +L P++ + P IF++A E++V+L +L YYK +G ++P G YP+ L +YT L++P + + V T ADVLTS VK +LD+AW+ + +SGDF D + A + SWE Y VL P + +LP W RF QCLRR++DTG R+P+L NA KYAMAQTV++FG F P+ T DV +W+ + ++S+ YS+ WD+ DWGLG G+L++RRM S Y++ + DL LRF W+ + IPPG+ F +P Y+ ++++EI RR WG FRLENE LRNT+G+R +DV+PL F T + K+ V+ EV VA I +++ AVVVA D
Sbjct: 235 ERELIETTLMRLNRELTLLENFCIINYTGFIKILKKHDK--------------------------------------------LMPSRPLRASVLPQLEKAQFFRHARLEDIK----------------------LEVTTI----FADVFCNKDKNQAAAMLLPKRFRTNVDFFLLQLGYKLGVAATLALWVVWDCVVQVAKFGKP-TIVTKMAFPVFRAVGGLLLLHWCWGIIEHFCNYLRINFVYLLDLSPKN-----------------------------------VSSPRKIFDEAVNESIVYLTCMLLYYKVLVG-GFPDWIPAGFYPIFLLVYTLYCLVFPWKQRKGIWWIVGRVVVAPLVSVTLLDTVVADVLTSLVKVLLDLAWSAFYVISGDFTRD--IRGAPDEVPSWELSVLYSKVLAPVIVILPYWWRFMQCLRRFYDTGNRWPHLLNATKYAMAQTVTLFGAFHHVYYHVRGGKGGRVHPSLTYDV---VWVMVTVISTFYSYVWDVTMDWGLGRPSKGFLNDRRMCSSNVPYYSAMVADLFLRFLWVNTLIPPGSGGLFSLPLYLNAFLMVMEILRRMFWGVFRLENEQLRNTQGFRRVDVIPLSFSTENQHEYRDPKNTNNLRVILEVSFVAGLVIFLSIGAVVVADGID 788
BLAST of jgi.p|Trimin1|352686 vs. uniprot
Match: A0A7S2KW14_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KW14_9STRA) HSP 1 Score: 360 bits (923), Expect = 6.640e-113 Identity = 190/445 (42.70%), Postives = 249/445 (55.96%), Query Frame = 1
Query: 1207 WDCCVEVFKRGEDVSVMGQPAFRVYRGVAGLLLLHWAWGFSVLVWTRTRINFIYLFELDPRHQMTWCIXXXXXXXXXXXXQPKXXXXXXXXXXXXXXXAPPISIFNDAALETVVFLANLLAYYKAQMG---LPTRSFVPPGIYPLVLCLYTAKRLIYPMDVKMEV---------------DFFATYCADVLTSSVKTVLDMAWTIGFFLSGDFLMDRHVWMARHKSNSWEQQFWYVSVLVPALCVLPLWLRFQQCLRRYHDTGKRFPNLANALKYAMAQTVSIFGVFRP--------------------------PAPTIDVYNGIWMALYIVSSLYSFWWDIKQDWGLGHRKHGWLSERRMHSRVWVYWATIAVDLILRFNWLYSFIPPGTSHFFIVPNYVTTVVIMLEIFRRTLWGFFRLENEHLRNTEGYRTIDVVPLHFHT 2409
WDC RGE VS+ G+ AF V+RG GLL HW WG SV VWTR RIN+IYLFE DPR+ T PI IFNDA ET+VFL +L YYK + P +PPG YP+ L LYT K +I+P ++ + FF TY DV TS VK D+ W++ F SGD+L+ A H ++W Q WY ++ +P +C+ PLWLRF QCLRRY DTGKRFPNLANA KYAM+Q V++FG F P ++++ WM L+I SSLYS+ WD+ DWGLG R++G+L R M R Y++ +A DLILRF W+ + IPP + F +P Y++ + ++LE+FRRT+W FFRLE+EH +NT+GYR + VVPLHF+T
Sbjct: 2 WDCVWGQLSRGE-VSIGGRTAFPVFRGCFGLLAWHWFWGLSVYVWTRYRINYIYLFEFDPRNVDT-----------------------------------PIDIFNDAVDETLVFLICMLLYYKTESDDQLFP--DLIPPGAYPMFLILYTIKCMIFPWKLRKPLWNSIRQVLLASFVSPTFFLTYVGDVFTSMVKVFQDILWSVCFVASGDWLISDKQHAAMHHVHAWSDQLWYKNIAIPLICLFPLWLRFNQCLRRYMDTGKRFPNLANAFKYAMSQAVTLFGAFHPLYLMHERNEHYDVSLSDDDEEGIVLSSRHGVNLFQIFWMGLFISSSLYSYIWDVYMDWGLGRREYGFLGPRLMFPRKSHYFSVMAADLILRFMWVLTLIPPQSGAKFELPAYLSAISMVLELFRRTIWSFFRLEHEHRQNTDGYRRVGVVPLHFNT 408
BLAST of jgi.p|Trimin1|352686 vs. uniprot
Match: A0A7S4AUW5_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AUW5_9STRA) HSP 1 Score: 361 bits (926), Expect = 5.080e-108 Identity = 219/666 (32.88%), Postives = 334/666 (50.15%), Query Frame = 1
Query: 625 LESDSLQRAMSEIYRDLTLLRNFAIINYTAAVKLLKKHDKKLAKPKGPRKRTTSTSSLHSMGMSFRGLQPQAPKNTDAAILAAALKPSDAITADVMAYLHRQDFYALKRLTQEKQFHSDFYTLKRLDEXXXXXXXXXEVTRMCEKEFAIMFCSGNVSQARGMLLPQKTDER-FDWAQFQLGYHLGIAAVLAFWVVWDCCVEVFKRGEDVSVMGQPAFRVYRGVAGLLLLHWAWGFSVLVWTRTRINFIYLFELDPRHQMTWCIXXXXXXXXXXXXQPKXXXXXXXXXXXXXXXAPPISIFNDAALETVVFLANLLAYYKAQM-GLPTRSFVPPGIYPLVLCLYTAKRLIYPMDVKMEV---------------DFFATYCADVLTSSVKTVLDMAWTIGFFLSGDFLMDRHVWMARHKSNSWEQQFWYVSVLVPALCVLPLWLRFQQCLRRYHDTGKRFPNLANALKYAMAQTVSIFGVFRPPAPTI----------DVYNGIWMALYIVSSLYSFWWDIKQDWGLGHRKHGWLSERRMHSRVWVYWATIAVDLILRFNWLYSFIPPGTSHFFIVPNYVTTVVIMLEIFRRTLWGFFRLENEHLRNTEGYRTIDVVPLHF---HTAKTITEKKSKGGAWVLGEVFLVAASAIVVTVAAVVVARNHD 2532
L++ +++R++++ YR LL+N+A++N T VK++KK DK + G R +H+M D A++ L+ + EK FA FCSG++ +A+ +L ++ D DW+Q QLGY +G++A+LA WV WD + G+ ++ + AF V+RG GLLLL W WGFSV +WTR R+N+I+LF+ +PR T P I +DA T+ +L +L YYKA +P +PPG YPL+L T +L++P+ ++ + FF TY D+ TS VK ++D++WT + LSGDFL+ W +Y +VL+P +C+LPL RF QCLR+Y D+G RFP+L NA KYA++Q V++ G F P + VY W L+ SS++SF WD+ DWGLG +K+ +L R M+ + +VY+ TIA+DL+LR W+ + +PP + F +P Y+ ++ ++LE+FRRT+WGFFRLENEH N YR +D VPLHF H +K + G VL EV LV + +A+++ A+ +
Sbjct: 292 LKAATIRRSLTDQYRLAKLLQNYAMMNITGFVKIVKKFDKTVPSENG---RFKDALEIHNM---------------------------------------LNDAKAVETLSNKY-----------------------------EKYFANWFCSGDLREAKAQMLTKRGDGLDMDWSQLQLGYRMGMSAILALWVCWDLIWGMVAYGKT-TIGARHAFPVFRGCGGLLLLQWFWGFSVFMWTRYRVNYIFLFDFNPRIVRT-----------------------------------PKEIISDAVDNTLSYLVLMLLYYKAGAHDIP--QVIPPGGYPLILVFGTTWKLVFPLKTRIPMWQTIFRVVTAPCHAPTFFQTYVGDIFTSLVKVLVDLSWTFFWVLSGDFLLAERT--TEDHLGHWSNTHFYKNVLIPIICMLPLVFRFNQCLRKYVDSGDRFPHLVNASKYALSQLVTLTGAFHPLYMEVASKKGRVGRESVYQIFWTFLFFASSIFSFSWDVYMDWGLGRKKYDFLGPRLMYPKKYVYYITIAMDLVLRSLWVLTLLPPSSGARFALPAYMYSLQVILELFRRTIWGFFRLENEHRSNVNRYRRVDFVPLHFDTGHNKHMHKDKMERSGISVLREVILVTLVVVGFCIASIISAQRAN 846
BLAST of jgi.p|Trimin1|352686 vs. uniprot
Match: A0A448Z962_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z962_9STRA) HSP 1 Score: 347 bits (891), Expect = 1.560e-102 Identity = 185/504 (36.71%), Postives = 275/504 (54.56%), Query Frame = 1
Query: 1039 VTRMCEKEFAIMFCSGNVSQARGMLLPQKTDE-RFDWAQFQLGYHLGIAAVLAFWVVWDCCVEVFKRGEDVSVMGQPAFRVYRGVAGLLLLHWAWGFSVLVWTRTRINFIYLFELDPRHQMTWCIXXXXXXXXXXXXQPKXXXXXXXXXXXXXXXAPPISIFNDAALETVVFLANLLAYYKAQMGLPTRSFVPPGIYPLVLCLYTAKRLIYPMDVKMEV---------------DFFATYCADVLTSSVKTVLDMAWTIGFFLSGDFLMDRHVWMARHKSNSWEQQFWYVSVLVPALCVLPLWLRFQQCLRRYHDTGKRFPNLANALKYAMAQTVSIFGVFRPPAPTID-------VYNGIWMALYIVSSLYSFWWDIKQDWGLGHRKHGWLSERRMHSRVWVYWATIAVDLILRFNWLYSFIPPGTSHFFIVPNYVTTVVIMLEIFRRTLWGFFRLENEHLRNTEGYRTIDVVPLHFHTAKT--ITEKKSKGGAWVLGEVFLV 2475
+T+ E +A FC G+V A+ +L +K D+ DW+Q QLGY +G+ AVLA WV WDC V K G+ ++ + AF ++R GLLLL W WG S+ +WTR RIN+I+LF+ P T P F A T++FL +L YYKA + +P +YPL L T RL +P+ ++ + FF TY D+LTS VK D+AW+I + +G+++ + ++ + W +WY SV++P + ++PL +RF Q LR++ DTG+RFP+LANA KY ++ + +FG+F P D + W +++ SS+YSF WD+ DWGLG K +L++ + R W Y+ATI +DL+LRF W+ + +PP + F +P Y+TT+ + LE+FRRTLWGFFRLE+EH + YR VPLHF+T ++K + G+ VL EV LV
Sbjct: 412 LTKRYEAYYANWFCEGDVRAAKVQMLSKKGDDLETDWSQLQLGYRMGVCAVLAVWVCWDCVWGVVKSGKS-TIAERSAFPIFRACGGLLLLQWFWGCSIFIWTRYRINYIFLFDFIPSTVST-----------------------------------PFDTFCAAVDNTLIFLTLMLLYYKAGVN-DIPEVIPTEMYPLFLMFITLFRLAFPLRQRLPMWRSIYKVVSSPLHSPSFFQTYVGDILTSMVKIFQDIAWSISWLWAGEYMASKDSGVS--TTQMWCNTYWYKSVVIPLITMMPLVIRFNQNLRKFWDTGERFPHLANASKYVLSSLLPLFGIFHPLYLEYDRGAXENRFFKTFWTLIFVTSSVYSFLWDVYMDWGLGRHKXSFLNQSLVFPRKWYYYATIGIDLVLRFLWVLTLVPPDSGASFALPQYLTTLSMALELFRRTLWGFFRLEHEHRNHEHDYRRKGFVPLHFNTGHLHKYKDEKERAGSEVLREVILV 876
BLAST of jgi.p|Trimin1|352686 vs. uniprot
Match: K3WSV9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSV9_GLOUD) HSP 1 Score: 331 bits (849), Expect = 3.990e-98 Identity = 247/844 (29.27%), Postives = 364/844 (43.13%), Query Frame = 1
Query: 1 MVQFGLKLQDNIVAKWADHYMDYKKLKTELTRRYKAWEAAALADAKQNKLRLLAASLGVKSPGKLEAKASPGRGRSPKRGNSGGVEEEESFKSLIIAEIDKVXXXXXXXXXXXXXXYVRTRDSLGKELDMLLVGELSGPFRMRRPTLGSSDSEQLESMRGFSEDYYDGNSMSRATGSFRMKKSHIFASQHCVTPQLQAASRETSAADALESDSLQRAMSEIYRDLTLLRNFAIINYTAAVKLLKKHDKKLAKPKGPRKRTTSTSSLHSMGMSFRGLQPQAPKNTDAAILAAALKPSDAITADVMAYLHRQDFYALKRLTQEKQFHSDFYTLKRLDEXXXXXXXXXEVTRMCEKEFAIMFCSGNVSQARGMLLPQKTDERFDWAQFQLGYHLGIAAVLAFWVVWDCCV-EVFKRGEDVSVMGQP---AFRVYRGVAGLLLLHWAWGFSVLVWTRTRINFIYLFELDPRHQMTWCIXXXXXXXXXXXXQPKXXXXXXXXXXXXXXXAPPISIFNDAALETVVFLANLLAYYKAQMGLPTRSFVPPGIYPLVLCLYTAKRLIYPMDVKME----------------VDFFATYCADVLTSSVKTVLDMAWTIGFFLSGDFLMDRHVWMARHKSN-------------------SWEQQFWYVSVLVPALCVLPLWLRFQQCLRRYHDTGKRFPNLANALKYAMAQTVSIFGVFRP----PAPTIDVYNGIWMALYIVSSLYSFWWDIKQDWGLGHRKHGWLSERRMHSRVWVYWATIAVDLILRFNWLYSFIPPGTSHFFIVPNYVTTVVIMLEIFRRTLWGFFRLENEHLRNTEGYRTIDVVPLHF 2403
MV F L+L+DN+ A+W Y+DYKKLK L ++ + A+L A L + S A S S G+SGG SF + K EL L++ + + R ++ ++ + F+++ ++ +R A A +SL+ ++ E++R L LL+NFA++NYT +K+LKKHDK + P P + D L R F ++ E+ R E+ FA +FC N S A L+ +K D +WA +G +G +L WVVWD V FK + ++ A+ VYRG+ LLLLHW G S+ VW RIN+ Y+FELDPR+ + +F+DA T+VFL N+L YYK G + + G YPL+L +YT I K V FF T+ D LTS+VK D+ W++ FF + +FL + A + + + +YV+V VP +C LPLW RF Q LRR +DT +PNL NA KYA+AQ V++FG+F P ++ + W+ L+ +SS+Y++ WD+ DWGLG +H +L +R+M SR WVY+ I DL LRF W + IPP +S ++P Y+ ++ E+FRRT W FFRLENEHLRNT+G+R +D +PLH+
Sbjct: 1 MVHFNLRLRDNMYAEWRHEYVDYKKLKRLLKKQQQI--DASLTVAASTALLDVDTDASSASDDNYAAICSSKNDASANSGSSGGRRSTSSFLRSLAPNSQKAVDT--------------------SELQALVIAPAAFEDALERE-YDKVENAYIKHVTQFADE------LALLKDQYRYD------------------------APAATQESLKNSLVELHRLLNLLQNFALLNYTGFIKILKKHDK---------------------------MFPSLPS----------------LRRDHKRRLQRFAFAEAQQCR--------------------------ELLRELEQVFADLFCESNRSVAIATLMTKKEDF-VNWAHIYIGIKIGSCIILLVWVVWDSLVVPTFKSERERHIIDLALTRAYPVYRGIGCLLLLHWLVGLSLYVWRLARINYRYIFELDPRNTQQYA-----------------------------------EVFSDATNMTIVFLVNVLLYYKVVNGYFPEAILHRGYYPLLLSVYTFYFYIVRNWGKQHGLLRTLVEIVCSPFYSVTFFHTFVGDYLTSTVKVSQDICWSLCFFATQEFLEKDVIPDAGKRMSPLLHNAALDLGNSDDIQQGGCQNNVYYVNVAVPLICALPLWWRFLQSLRRIYDTETWWPNLPNAFKYALAQVVALFGIFHPFYSGDRDNVEAFQITWIVLFTLSSMYTWVWDVTMDWGLGRPQHKFLGDRQMFSRKWVYYLAIVADLFLRFAWTMTLIPPHSSR--MLPLYLLPFTMVGELFRRTFWSFFRLENEHLRNTQGFRRVDFIPLHY 684 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352686 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_15304 ID=mRNA_15304|Name=jgi.p|Trimin1|352686|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2535bp|location=Sequence derived from alignment at Contig_128:266278..288598+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGTGCAGTTCGGGCTCAAGCTGCAGGACAACATAGTGGCGAAGTGGGCback to top protein sequence of jgi.p|Trimin1|352686 >Trimin1|352686|estExt_Genemark1.C_Ctg_1280029 ID=Trimin1|352686|estExt_Genemark1.C_Ctg_1280029|Name=jgi.p|Trimin1|352686|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=845bp MVQFGLKLQDNIVAKWADHYMDYKKLKTELTRRYKAWEAAALADAKQNKLback to top mRNA from alignment at Contig_128:266278..288598+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_15304 ID=mRNA_15304|Name=jgi.p|Trimin1|352686|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=22321bp|location=Sequence derived from alignment at Contig_128:266278..288598+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_128:266278..288598+ >mRNA_15304 ID=mRNA_15304|Name=jgi.p|Trimin1|352686|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2535bp|location=Sequence derived from alignment at Contig_128:266278..288598+ (Tribonema minus UTEX_B_3156 )back to top |