mRNA_15302 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|352685
Unique Name	mRNA_15302
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|352685 vs. uniprot
Match: A0A835ZFV9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFV9_9STRA)

HSP 1 Score: 495 bits (1274), Expect = 2.770e-170
Identity = 411/411 (100.00%), Postives = 411/411 (100.00%), Query Frame = 3

Query:   96 MSAGGRKQAAGVRQSNGPDGSVGFGAGRGKPASPSPPPIESGNGEIGGLQGASQSSLSGGAVPLKIVSALELAAVGQEREQLQXXXXXXXXXXQFMGSVEGYGSPGDFRRGSTGSERKAVVDAGLWLKDGKVKARRRGDNPSDPDFQRNYEVYRPSFAPYRETAASQAQAGPLPIPPAQGQLPQWGPDPQQQQYLMQGQQGGLSPIQMQQLAAQLHPQHAAQQQQVYYATGMQQMAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGPTAQQXXXXXXXXXXXXXXXXXXXXXVRQETDYYAIXXXXXXXXXXXXXXXXXXXMGYAMHSAMALNLQQHAHMQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHTTRMHNASYNENFPALS 1328
            MSAGGRKQAAGVRQSNGPDGSVGFGAGRGKPASPSPPPIESGNGEIGGLQGASQSSLSGGAVPLKIVSALELAAVGQEREQLQXXXXXXXXXXQFMGSVEGYGSPGDFRRGSTGSERKAVVDAGLWLKDGKVKARRRGDNPSDPDFQRNYEVYRPSFAPYRETAASQAQAGPLPIPPAQGQLPQWGPDPQQQQYLMQGQQGGLSPIQMQQLAAQLHPQHAAQQQQVYYATGMQQMAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGPTAQQXXXXXXXXXXXXXXXXXXXXXVRQETDYYAIXXXXXXXXXXXXXXXXXXXMGYAMHSAMALNLQQHAHMQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHTTRMHNASYNENFPALS
Sbjct:    1 MSAGGRKQAAGVRQSNGPDGSVGFGAGRGKPASPSPPPIESGNGEIGGLQGASQSSLSGGAVPLKIVSALELAAVGQEREQLQXXXXXXXXXXQFMGSVEGYGSPGDFRRGSTGSERKAVVDAGLWLKDGKVKARRRGDNPSDPDFQRNYEVYRPSFAPYRETAASQAQAGPLPIPPAQGQLPQWGPDPQQQQYLMQGQQGGLSPIQMQQLAAQLHPQHAAQQQQVYYATGMQQMAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGPTAQQXXXXXXXXXXXXXXXXXXXXXVRQETDYYAIXXXXXXXXXXXXXXXXXXXMGYAMHSAMALNLQQHAHMQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHTTRMHNASYNENFPALS 411

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BLAST of jgi.p|Trimin1|352685 vs. uniprot
Match: A0A6H5KC01_9PHAE (SUZ domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC01_9PHAE)

HSP 1 Score: 61.6 bits (148), Expect = 2.700e-6
Identity = 58/159 (36.48%), Postives = 68/159 (42.77%), Query Frame = 3

Query:  114 KQAAGVRQSNGPDGSVGFGAGRGKPASPSPPPIESGNGEIGGLQGASQSSLSGGAVP-LKIVSALELAAVGQEREQLQXXXXXXXXXXQFMGSVEGYGSPGDFRRGSTGSERKAVVDAGLWLKDGKVKARRRGDNPSDPDFQRNYEVYRPSFAPYRETA 587
            KQA G   S GPDG++GFG+GRGKP                              VP          AA G+E E+               G+ EG  S G       GS R AV +AG W K  +   R R    SDPDF RNY+ YRPSFAPYR+ A
Sbjct:  504 KQAGGAVTSQGPDGTMGFGSGRGKP------------------------------VPGXXXXXXXXXAAAGREGER-------GVREEGGAGAAEGPVSXGAXXXXXRGSRRPAV-NAGEW-KGQRGMQRNRMAEKSDPDFVRNYDHYRPSFAPYRQLA 623

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|352685 vs. uniprot

BLAST of jgi.p|Trimin1|352685 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A835ZFV9_9STRA	2.770e-170	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A6H5KC01_9PHAE	2.700e-6	36.48	SUZ domain-containing protein n=1 Tax=Ectocarpus s...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_128	contig	Contig_128:229546..237210 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|352685\|estExt_Genemark1.C_Ctg_1280025
Hectar predicted targeting category	other localisation
TranscriptId	353007
Track	FilteredModels1
ProteinId	352685

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|352685	gene_15302	Tribonema minus UTEX_B_3156	gene	Contig_128 229546..237210 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_15302_1	exon_15302_1	Tribonema minus UTEX_B_3156	exon	Contig_128 229546..229679 +
exon_15302_2	exon_15302_2	Tribonema minus UTEX_B_3156	exon	Contig_128 230781..230916 +
exon_15302_3	exon_15302_3	Tribonema minus UTEX_B_3156	exon	Contig_128 231118..231335 +
exon_15302_4	exon_15302_4	Tribonema minus UTEX_B_3156	exon	Contig_128 232754..232813 +
exon_15302_5	exon_15302_5	Tribonema minus UTEX_B_3156	exon	Contig_128 233386..233488 +
exon_15302_6	exon_15302_6	Tribonema minus UTEX_B_3156	exon	Contig_128 234020..234198 +
exon_15302_7	exon_15302_7	Tribonema minus UTEX_B_3156	exon	Contig_128 234327..234363 +
exon_15302_8	exon_15302_8	Tribonema minus UTEX_B_3156	exon	Contig_128 234494..234540 +
exon_15302_9	exon_15302_9	Tribonema minus UTEX_B_3156	exon	Contig_128 235414..235533 +
exon_15302_10	exon_15302_10	Tribonema minus UTEX_B_3156	exon	Contig_128 236052..236177 +
exon_15302_11	exon_15302_11	Tribonema minus UTEX_B_3156	exon	Contig_128 236875..237210 +

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_15302	UTR5_15302	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_128 229546..229640 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_15302	CDS_15302	Tribonema minus UTEX_B_3156	CDS	Contig_128 229641..229679 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_15302	UTR3_15302	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_128 237046..237210 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|352685	Trimin1\|352685\|estExt_Genemark1.C_Ctg_1280025	Tribonema minus UTEX_B_3156	polypeptide	Contig_128 229641..237045 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_128:229546..237210+
coding sequence from alignment at Contig_128:229546..237210+

spliced messenger RNA

>mRNA_15302 ID=mRNA_15302|Name=jgi.p|Trimin1|352685|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1496bp|location=Sequence derived from alignment at Contig_128:229546..237210+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GCGGCAATGGCGGTGGCGGCGGCAGCGGCGGGCGGGGCGGGCGCAGCGCC
AGTCAGTCGCAGAGCGAGCCATGCACGCCCGGCACGAGCCCGGTGATGTC
CGCTGGCGGGAGAAAACAGGCGGCGGGCGTGCGGCAAAGCAATGGACCGG
ATGGATCTGTGGGGTTTGGTGCCGGGCGGGGCAAACCTGCATCCCCGTCC
CCCCCGCCCATCGAGAGTGGCAATGGAGAGATAGGGGGGCTGCAGGGGGC
ATCGCAATCATCTTTATCAGGCGGCGCGGTGCCATTGAAGATTGTGTCGG
CGCTGGAGCTGGCGGCGGTTGGGCAGGAACGGGAGCAGCTGCAACGTCAG
CAGCAGCAGCAACAGCAGCAGCAGCAGTTCATGGGGAGCGTGGAGGGATA
TGGGAGCCCTGGCGATTTTAGGCGGGGGTCCACTGGCAGCGAGAGGAAAG
CAGTGGTGGACGCGGGGCTGTGGCTCAAAGATGGCAAGGTCAAGGCGCGG
CGGCGTGGCGACAACCCTAGCGACCCCGACTTCCAGCGCAATTACGAGGT
TTACCGGCCCAGTTTCGCGCCGTATCGGGAGACGGCTGCTTCTCAGGCGC
AGGCGGGGCCGCTTCCCATACCCCCCGCTCAGGGGCAGTTGCCTCAATGG
GGTCCTGACCCGCAGCAGCAGCAGTACCTCATGCAGGGGCAGCAGGGGGG
GCTGTCGCCAATTCAGATGCAGCAACTGGCGGCGCAGCTGCACCCGCAGC
ACGCGGCGCAGCAGCAGCAGGTGTACTACGCCACGGGCATGCAGCAGATG
GCGCAACAGACGGCACCCTATATGCAGCAGCAGAATGGCGCAGCAGCCAG
CGCCCTACATGCAGCAGCGGGCATGCAGCAGATGGCACAGCAGCCGGCGC
CCTACATGCAGCAGTATGGTCCCACTGCTCAGCAGCAGCAGCAGCAGCAG
CAGCAGCAGATCATGCTGCAGCAGCAGCAGCAGCAGTCGCAGACGCCTGT
GCGGCAGGAGACGGACTATTACGCGATACAGCTGGCTCAGCAACAGGCGG
CGCAGCTGGCGCAACAACAGCAGCAGCAGCAGCAGATGGGCTACGCCATG
CACAGCGCCATGGCGTTGAATCTGCAGCAGCACGCGCACATGCAGCAGCA
GCAGCAGCAGCAGCTGCGGCAGTCCCCGCCGCCGGCCAACAGCCAGCAGT
CGTATGGCGGCACACCCCAGCAGCAGCAGCTCATGCTGCAGCAGCAGCAG
GCGCAGGCGCAGCAGCAGCAGCAGCACACGACGCGCATGCACAACGCCAG
CTACAACGAGAACTTTCCGGCGCTGAGCTGAAGGGACGTTCCGGCACTGT
GCTGCACGAAGCGATGCCCCCCCCCCCCCCTTCCTTCTCCCCCTGTTCCT
CTTGGAATTGCGGATGCAATGCGGTCAAGCGCAGCAAAAACCGCGCGTGC
AGACTCTACATGTAGGTCTGCATACACGGCCGCGTTTGCAGCGCCT

protein sequence of jgi.p|Trimin1|352685

>Trimin1|352685|estExt_Genemark1.C_Ctg_1280025 ID=Trimin1|352685|estExt_Genemark1.C_Ctg_1280025|Name=jgi.p|Trimin1|352685|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=412bp
MSAGGRKQAAGVRQSNGPDGSVGFGAGRGKPASPSPPPIESGNGEIGGLQ
GASQSSLSGGAVPLKIVSALELAAVGQEREQLQRQQQQQQQQQQFMGSVE
GYGSPGDFRRGSTGSERKAVVDAGLWLKDGKVKARRRGDNPSDPDFQRNY
EVYRPSFAPYRETAASQAQAGPLPIPPAQGQLPQWGPDPQQQQYLMQGQQ
GGLSPIQMQQLAAQLHPQHAAQQQQVYYATGMQQMAQQTAPYMQQQNGAA
ASALHAAAGMQQMAQQPAPYMQQYGPTAQQQQQQQQQQIMLQQQQQQSQT
PVRQETDYYAIQLAQQQAAQLAQQQQQQQQMGYAMHSAMALNLQQHAHMQ
QQQQQQLRQSPPPANSQQSYGGTPQQQQLMLQQQQAQAQQQQQHTTRMHN
ASYNENFPALS*

mRNA from alignment at Contig_128:229546..237210+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_15302 ID=mRNA_15302|Name=jgi.p|Trimin1|352685|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=7665bp|location=Sequence derived from alignment at Contig_128:229546..237210+ (Tribonema minus UTEX_B_3156 )
GCGGCAATGGCGGTGGCGGCGGCAGCGGCGGGCGGGGCGGGCGCAGCGCC
AGTCAGTCGCAGAGCGAGCCATGCACGCCCGGCACGAGCCCGGTGATGTC
CGCTGGCGGGAGAAAACAGGCGGCGGGCGTGCGGGTGAGTGCTGAGCACT
GCTGCACACTGCTCATTGTGGGGGCAGAAGTGTTTGTGGCACCGGCTGCA
GGGCGTGTCATTGCTTGATGTCAGAGGATATGATTGCTCTGACCGGGTCT
GGTGACAGAGCGCGTACTGCGTTGGCATGCGGCAGAAGCCCTCAATCAGA
CTTGGCCGTAGCTGTCAGTATAATCCCTGGGTTTCAGGAAAAACAGTAGA
CACTCATGTTGTTGACGGCATCGGCAGGCTGTGCAGTTGAGTGCAGCTTA
GCATAAGCCACAGGTTGAGCAGCATCTAGTTGCACCTCTCCTGGGCCAGG
TCAGGGCCAAACCTCTTCAGTGCAATGGTCGCCAGATTGCCATCGCACTT
TGAATATGTTGATGACATTCTTCACACATCACATTGGCCACACCTGGGCC
ATGTGTCGTTCTGCGGCTGCCAACTAAGCACTTGTTGCGCTCGTGTACCC
ACCACCCTTGCCGCAAGTCTCATTGCCAGACTATCATGACATATAAAGTG
TATGGTGTTCCAAGTGATGCCAGAGTCAGATTAATTTCAAGCGATCAACA
TGGCAGATTCAGCCCACGGCTATCCTTTCTTCAGATGGCAATCTAGCTGG
CCTCGACTTTCTCAGGTGACAGTGAACCCAGTGAGCGCAGCTACTTGCTG
CTTTTCCTTGCTTTTGTGTAGACTAGAGTCATTGGAGTCTTTGCAGCTAT
CCGTTGTACAGTACATTCAATCTCATTGTGCTTTGAAGCTGCGTGGTCCT
AACATAGGAACCACCTGCCTTACTGTTCATGCAATTACATTGATGTTTCT
CACCTCTCACTGTGCTCATCACCTCCTCCCACTTTCAGCGCTCACCACAC
TGTCCATTCAATCATTCCTGCTTGTGAGAATATGGTAATGTTCATCCTGA
GATGGGTCATTTGTGATCACACACCAATGTCAGCTACGCGCTCCAAGCTG
CCCTGTCGCTGCATCGCCACAGTCTAGCAGTCAGCGCTCAGCATCAGCTG
AGCAGTGCATCAGACGCCATTGCGCTCAAATTCAGTCTTATCAACCAAAT
GCCCATCCCCCCAAAAACTGTTCGCTTGTCAGCAGCAAAGCAATGGACCG
GATGGATCTGTGGGGTTTGGTGCCGGGCGGGGCAAACCTGCATCCCCGTC
CCCCCCGCCCATCGAGAGTGGCAATGGAGAGATAGGGGGGCTGCAGGGGG
CATCGCAATCATCTTTATCAGGTAGAAACATGCAGCGCCGCATTGTATGC
ATTTCATGTGATCATCAGGACTTGATTGCGAATCGCTACAAATGTCGCGT
GCTCTCATATCGGCTGGCATCGGCCATGATGATGCGTCTTGGAGCGTGGC
AGTTGCATTTACACACGTTGAAGATTCGTCCGTTGACAATTACGTAACTG
CCATCATTGTCGCACGCTGCAGGCGGCGCGGTGCCATTGAAGATTGTGTC
GGCGCTGGAGCTGGCGGCGGTTGGGCAGGAACGGGAGCAGCTGCAACGTC
AGCAGCAGCAGCAACAGCAGCAGCAGCAGTTCATGGGGAGCGTGGAGGGA
TATGGGAGCCCTGGCGATTTTAGGCGGGGGTCCACTGGCAGCGAGAGGAA
AGCAGTGGTGGACGCGGGGCTGTGGCTCAAAGATGGCAAGGTGAGATCAA
TTTCAGCTTGAAGATGACAATACAGCAAAACAGTATCGGTGCAGGACCTG
CGATTCAAGCTTGGCAAGGAACTACTTCAACTTGAAGCTGGTACTTCATT
ATGTGCACCTCTGCAAAGCTCAAGAGACAGCGGCAGTGGTTGGACAGGGG
AGCAGACATTGCCGGCGCATCGATTTGTCTTGGGGACTTCACACTTTGTC
AGCGTGAAAGAATGGGAGGCCTTTGCTGCTGGCCGCTTGGACATTGCTGC
ATGTCAGCCCAGTCTACGACTGTGGTACAGCTTCAAAAGACAACGATATC
ACTGTGTGTGCAACCGACGAGCCGGGGATCACAGTGGCCGTAAAGTTCAC
GCTGTTTACCTCAAGAAAACCTGTGCCTACAGCCAGCGGGCTGTCGCTAT
GTCCATATATGTGGCATCTCCAAACAAGTGTAGTTTTGACAAACAGCGTC
ATGCATAGATATTAGGGCAGCCAGTGCACTTCAGGGGACGTGGGGACGCA
GAATGCAGGCAGCAGTGGCGTGGTCGTACGAAAGTAGATTGGGCCGGGTA
TGCATCAGATAGCTAGAATGACGACACTGCTGTGATGGGACCCACCCTAC
CCATCTTCTGTAGCATTATTGACAGCTCATGTTGAATGACCAAGGGTGGG
GGCAGTGTGAATGGTATGCGCAGGCAGACCTGTCTCCATCTCACCATGTG
CAGTAGAAGCACCGGGAGCATCGCCGAGACACGTGTATCTGGTTTCGGAG
CGCTGCTATCGTAAGCAAAACGGGGGTGCATGGACAAACAATGAGTTCAC
AGTTCGAGATGGTATTTTGAAAAGCTGCACTGCTGAGGCACACAGCTGCC
ACAAACAATTCTTATTTCGGAAGCTGTACTGGCTTATACAGGAAGATTAG
TGCATTTGACAGGTACACTACGTCGGATGCTCACAGGAAATGAATAGCGT
GCACTTGCGACAACATGCCGTCTGCTGGCGTCTCGTGCATAAACAGGTGC
CGCATCCGCCGTCGGTCTCCGTATGCACCTCAGATGCCCACACAAGAAGC
GGTTGTTTTGTACAATACAAACCTTCAAAACAGATTGTACCATTTTGACG
GAACATCGCCTGCACTGAATGTTGTCAAAATGGTCCCATGGCGCGCGCCT
GGTGCGGGCCACCTCTGACGACAATTCGCACTGTCTACAACTTGTCGTCA
CTCTGGCATACTGTTGCTCACTCCGACTAGTAGAGTCCAGCACTGTTTGC
TCTGACACACACATGAGCGCGCGCAACCTGCAGCTGTGGTGCTCGAAATG
AACACCTCTGCAGAGTTTTGGAGCGGGGGAGGCTTAGCTTTCCAAAGCTG
TGCACAAAGCCTATATCTCATTTCATTGCTTTTTGCCATTTCGGTCGAAC
AACTGCAGGTCAAGGCGCGGCGGCGTGGCGACAACCCTAGCGACCCCGAC
TTCCAGCGCAATTACGAGGTATGTATTGCATGCTGCGCATGTGTATACCC
CCACCAATAATTGTCTTGAACGTCTCTCAAGTATTGGGCGCTGTTGGCCA
GGGCTGCTAGCCTGCTGTAGCTCATGTGGCCCGTGTTTGCGCAACCGGGA
TTTGCGCAAGTCTGTTCAATTCTGTAACTGTCAGATTCTATAACCAACGG
CGTCATCGCCTCCGCATCAGCGGTGTGTCACATGTGGCGACGCTGTCTCC
ATCGCAGCCCATTCGCTGCGCTTGGGCGTGTTGCAAACGGAGAGCCTGCT
GTGCATGCCGCTGCTACGCGGGTAAGCACACCGCTCTGCGTGCGTCACAT
CAGTGCTCAGTGCACAACAAGCTGAGCATCAACACACAAATCTCCTTGTC
ATGCAACAATGAATGCCCTCGCATTGGATGCCTTCCACTCTCTCATGGGC
TGTGCCATCGTCACCGAACACTGCGCCAGAACTCGTTTGCGGGCCCGCTC
CCCCCCCCCGTTGCTGCTGCGAACGCTACATCTATGACTTTTTGAACATG
CGTGCCTGATGTCATCGCTTATGGGACCCTGCCGCGTCAGGTTTACCGGC
CCAGTTTCGCGCCGTATCGGGAGACGGCTGCTTCTCAGGCGCAGGCGGGG
CCGCTTCCCATACCCCCCGCTCAGGGGCAGTTGCCTCAATGGGGTGAGTT
GCGTTTTTTGAGTCGTATGTCATGGTGATGATTTGTGATTCATGTGATGA
GTCATGAGTCGTATGAGAAGTTGAGTTGCGCATGCGTCTTTGCTGTCTGG
CGGTGGCCTTTCGGATTATGAAAATTGTGCATACGCTGACATGGGTATCC
TGCACGTGTGCGAAGCACTCTAGTTGAGTGTGCTGCACATGCTGGCAGTT
AGTTACACCACTGAATCCATGACATACGCCTGTCTGTTCCGCTTGTAACT
GCCACATGGCATGATGTGGCTCAGGTCTCGATCCGCAGCAGCAGCAAAAC
CTCATGCAGGGGCAGCAGGGGGGGCTCTTGCCCATCCAGATTTGCACTTA
TTGTGCTTACTGTTGCGTTTGTAACTGCCGCATTGCATGATTCACCTCAG
GTCCTGACCCCCAGCAGCAGCAGTACCTCATGCAGGGGCAGCAGGGGGGG
CTGTCACCCATCCAGATCTGCAAGTATTGCTTACTGTTACGTTTGTAATT
GCCACATCGCATGATTCGCCTCAGGTCCTGACCCGCAGCAGCAGCAGTAC
CTCATGCAGGGGCAGCAGGGGGGGCTGTCGCCAATTCAGATGCAGCAACT
GGCGGCGCAGCTGCACCCGCAGCACGCGGCGCAGCAGCAGCAGGTGTACT
ACGCCACGGGCATGCAGCAGATGGCGCAACAGACGGCACCCTATATGCAG
CAGGTGCGTGTTTGAAGACGGACCCTTGCAGCAGAAAACACAATTTTCAC
CTCACTCGCAGAGCAGGGGTTCAATCATAGACAACACGCTTCTTCCTCCA
ATTCAAATTGCAAAATTTACTGCGCATGCAGCAGAATGGCGCAGCAGCCA
GCGCCCTACATGCAGCAGGTACGTCCTCAGTTTACAACCTAAGCTACGCA
CTTCGGTACTTTTAGCAGCATGCGGCGCAGTAGCAGCAGGTTTACTTTTT
TGATTTTGGTTGTCAATGGGGCGCGGAAACAGCATGCGTACTGCGCAGCG
GGCATGCAGCAGATGGCACAGCAGCCGGCGCCCTACATGCAGCAGGTACG
TCCTCAGTTGCCAGCCTACACACTTGGTACTTCCGTACCTACGCACTCAG
GGAATTTGAGGTTGGGGCTCACCTGACGGCTTGAAAAAATACAGGCGACT
CATGTAGTTCTGCGCAGCAGATGGCGCAGCAGCTTGCGCTCTACATCAGT
GGGTGCATCCTCACTTCGTACGTACTGTGTTCGTCAGGTATTGTGGGGGG
CTGTAGCTGGCGCGCTACATGCGGGCAGGTGTGTCCTTTGTGTGCCCACG
CGCGTGTTAAAGTGCGCGAACCGAGCGGCAACATCCTCAATAGCTACAGC
GCAAGCTCATCACCCCCAGCTTCCCAGCGAAATAACTTGCAAATTCAAAA
TACGGCCACCGTCAGCAGGTACCTATCTGCGCGTCTCAAGCGCCGCAAGT
TTGCGTGGCTAGGATCAGAGCTAAGCTGTACGTGCAGCATGCACATGATT
CTGTCGGTCCCCAATATCGTCAGCGGCAGGTGTGCCATTGTACTGGCACG
CGGCGAATGCTCACCAGCCAATGCAGCACCTGCAGCAGGTGCTTCTGCTC
TGACCGTAACACCAGGTGGCCCGTGCATACTTCTGACGCGCTCTCCTGAT
GCTCTGCGGACCTCACTCTCGCAGCAGATGCTCAGCAGACAGTACTCTAT
GGGCCCAGCCCCTATGTAGTTGAGTGCACCTGTAGCAAGTGATTTACTCA
GACTGCAGCATACTCGCGTGCATCACTCCGGCGCACGATACGCGTTTCTT
CAACGCGCCAACTGCGTAGTTCTGCAGTCCTGTCTCTGATAAGGTGACCA
CGCAAGAGGATTCACATTAGAACCACTATTGTACTGTACCTGTCGCTCTA
TGTCTTGTGCATTTGCAGTATGGTCCCACTGCTCAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGATCATGCTGCAGCAGCAGCAGCAGCAGTCGCAGACGC
CTGTGCGGCAGGAGACGGACTATTACGCGATACAGCTGGTGAGACACTGT
ACTGTTGTACTGATTAAATTGTACTGTGAACTGTCAACACTGAATTGTGA
ACTCCTACGCACTGCAGCTGCGCCCTTCACAACGCTCTTCACAACGCTAG
CGCACTATAGGTCCGCAAGCATGCAGGATGCTTGCCTGCCTAGAGTAGAT
AGATTCAATGTCCTTTGTTTTACTGCACTGCGTGCTCGTGTCATCCTTAC
ACCTCAGGCACTCGCCTGCCATTTTGTCAGGTGTAGCAAGAAGACGCCGG
CTACATACATCATTGGTTTCTGGTACCAGACTTCAGGCATGACTGTGTGT
ACATGCAGCTGTGCGTCTCTCATGGTGTGGGAAAGGACCATGTGATGCGT
TCTCTTATTGCGCCAAGTGCAGGTGCGGGGTGAGTTGCGCATTTGTGATT
GCTTCAGTAGTCGTCTTTGGTGTAACTGCTGGCTTTGCTGGGGCTGCTTC
TCTGCACACAGCAGCAAGGAGCTCAGACGCCGAAGGTTCTGTTGTTTGCG
TGGCAGGCTCAGCAACAGGCGGCGCAGCTGGCGCAACAACAGCAGCAGCA
GCAGCAGATGGGCTACGCCATGCACAGCGCCATGGCGTTGAATCTGCAGC
AGCACGCGCACATGCAGCAGCAGCAGCAGCAGGTGATTGTTTATAAACGC
ATGCATCAAGCGCCCGACTTGGTGTTGAAGGCTATTGCAGCTGCGCTGAA
CTTGCTTGTTCAGAGCTCCATTTGAGTGTCGGTGAACCATGCTGTTTGTT
GACTCATGCTTACCGATGCTTATTTGCTGTGCATTCTTTCTTTACTTCAG
CCGTTGGGGATGCAGCAAATGCTGCCGACCACCACAATCTTACCATTAAC
GCAAAGCTTGTTCTCAAAGGTAGTCAGGCCGTGGGTTAAGGTTCATGTTT
TCATCGTCCTGTGTACATCGTAGTTGTAGCAATCCTTTCCTTTCCCTGCG
CCTTTTGGTTCCTGGTGATGATGATGATGATGCTCAACACCTCCCCATGC
AGTTTACTGAGCATGCCCCGTTTTACTCCCAAGTTAAAAGCTTTCAACTG
TGAGCCCGGGTGCCTTCTCTGCCAGCTCTGTATTTTTTTCTTCTGCGCAT
ACAGACACCTCCATCGCTTTGCTCCATTTGCATCCTTCATGATGCACAAT
GTTATTTCCAGTGGTTTAAAATGCTGCTTATCTCAAGTCAGCTAAAATTG
AAGCAGCGGATGCAGCGCCACTTTTGTCTCACATTTCGGTGCTCCCACAT
CGTGCATGCTCTGCAGCTGTTTCGGATGCAGTGCCAGGCTTGTCTCACAT
TTCGATGCTCCCCTCTCGTGCACGCGCAGCAGCTGCGGCAGTCCCCGCCG
CCGGCCAACAGCCAGCAGTCGTATGGCGGCACACCCCAGCAGCAGCAGCT
CATGCTGCAGCAGCAGCAGGCGCAGGCGCAGCAGCAGCAGCAGCACACGA
CGCGCATGCACAACGCCAGCTACAACGAGAACTTTCCGGCGCTGAGCTGA
AGGGACGTTCCGGCACTGTGCTGCACGAAGCGATGCCCCCCCCCCCCCCT
TCCTTCTCCCCCTGTTCCTCTTGGAATTGCGGATGCAATGCGGTCAAGCG
CAGCAAAAACCGCGCGTGCAGACTCTACATGTAGGTCTGCATACACGGCC
GCGTTTGCAGCGCCT

Coding sequence (CDS) from alignment at Contig_128:229546..237210+

>mRNA_15302 ID=mRNA_15302|Name=jgi.p|Trimin1|352685|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1236bp|location=Sequence derived from alignment at Contig_128:229546..237210+ (Tribonema minus UTEX_B_3156 )
ATGTCCGCTGGCGGGAGAAAACAGGCGGCGGGCGTGCGGCAAAGCAATGG
ACCGGATGGATCTGTGGGGTTTGGTGCCGGGCGGGGCAAACCTGCATCCC
CGTCCCCCCCGCCCATCGAGAGTGGCAATGGAGAGATAGGGGGGCTGCAG
GGGGCATCGCAATCATCTTTATCAGGCGGCGCGGTGCCATTGAAGATTGT
GTCGGCGCTGGAGCTGGCGGCGGTTGGGCAGGAACGGGAGCAGCTGCAAC
GTCAGCAGCAGCAGCAACAGCAGCAGCAGCAGTTCATGGGGAGCGTGGAG
GGATATGGGAGCCCTGGCGATTTTAGGCGGGGGTCCACTGGCAGCGAGAG
GAAAGCAGTGGTGGACGCGGGGCTGTGGCTCAAAGATGGCAAGGTCAAGG
CGCGGCGGCGTGGCGACAACCCTAGCGACCCCGACTTCCAGCGCAATTAC
GAGGTTTACCGGCCCAGTTTCGCGCCGTATCGGGAGACGGCTGCTTCTCA
GGCGCAGGCGGGGCCGCTTCCCATACCCCCCGCTCAGGGGCAGTTGCCTC
AATGGGGTCCTGACCCGCAGCAGCAGCAGTACCTCATGCAGGGGCAGCAG
GGGGGGCTGTCGCCAATTCAGATGCAGCAACTGGCGGCGCAGCTGCACCC
GCAGCACGCGGCGCAGCAGCAGCAGGTGTACTACGCCACGGGCATGCAGC
AGATGGCGCAACAGACGGCACCCTATATGCAGCAGCAGAATGGCGCAGCA
GCCAGCGCCCTACATGCAGCAGCGGGCATGCAGCAGATGGCACAGCAGCC
GGCGCCCTACATGCAGCAGTATGGTCCCACTGCTCAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGATCATGCTGCAGCAGCAGCAGCAGCAGTCGCAGACG
CCTGTGCGGCAGGAGACGGACTATTACGCGATACAGCTGGCTCAGCAACA
GGCGGCGCAGCTGGCGCAACAACAGCAGCAGCAGCAGCAGATGGGCTACG
CCATGCACAGCGCCATGGCGTTGAATCTGCAGCAGCACGCGCACATGCAG
CAGCAGCAGCAGCAGCAGCTGCGGCAGTCCCCGCCGCCGGCCAACAGCCA
GCAGTCGTATGGCGGCACACCCCAGCAGCAGCAGCTCATGCTGCAGCAGC
AGCAGGCGCAGGCGCAGCAGCAGCAGCAGCACACGACGCGCATGCACAAC
GCCAGCTACAACGAGAACTTTCCGGCGCTGAGCTGA