mRNA_15280 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|130634 vs. uniprot
Match: A0A835ZCG5_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCG5_9STRA) HSP 1 Score: 303 bits (777), Expect = 2.440e-104 Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 1 Query: 1 IDHKRFEKALYKATDSRTALKRTLHDYMRIMGKLEVGLGVLSCIVMGLVCGIILDVNFVQAGTTWLTLALAFSFCFGDTVKRLFEGLVLVFVWNPYGISDRVFINDDNKVEMNLVVTKINLLNTEFIRSDGQLCIISNSIIQQRDVRNASRAEF 462 IDHKRFEKALYKATDSRTALKRTLHDYMRIMGKLEVGLGVLSCIVMGLVCGIILDVNFVQAGTTWLTLALAFSFCFGDTVKRLFEGLVLVFVWNPYGISDRVFINDDNKVEMNLVVTKINLLNTEFIRSDGQLCIISNSIIQQRDVRNASRAEF Sbjct: 1 IDHKRFEKALYKATDSRTALKRTLHDYMRIMGKLEVGLGVLSCIVMGLVCGIILDVNFVQAGTTWLTLALAFSFCFGDTVKRLFEGLVLVFVWNPYGISDRVFINDDNKVEMNLVVTKINLLNTEFIRSDGQLCIISNSIIQQRDVRNASRAEF 154
BLAST of jgi.p|Trimin1|130634 vs. uniprot
Match: A0A835YYX4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYX4_9STRA) HSP 1 Score: 300 bits (769), Expect = 6.020e-96 Identity = 153/154 (99.35%), Postives = 153/154 (99.35%), Query Frame = 1 Query: 1 IDHKRFEKALYKATDSRTALKRTLHDYMRIMGKLEVGLGVLSCIVMGLVCGIILDVNFVQAGTTWLTLALAFSFCFGDTVKRLFEGLVLVFVWNPYGISDRVFINDDNKVEMNLVVTKINLLNTEFIRSDGQLCIISNSIIQQRDVRNASRAEF 462 IDHKRFEKALYKATDSRTALKRTLHDYMRIMGKLEVGLGVLSCIVMGLVCGIILDVNFVQAGTTWLTLALAFSFCFGDTVKRLFEGLVLVFVWNPYGISDRVFINDD KVEMNLVVTKINLLNTEFIRSDGQLCIISNSIIQQRDVRNASRAEF Sbjct: 62 IDHKRFEKALYKATDSRTALKRTLHDYMRIMGKLEVGLGVLSCIVMGLVCGIILDVNFVQAGTTWLTLALAFSFCFGDTVKRLFEGLVLVFVWNPYGISDRVFINDDYKVEMNLVVTKINLLNTEFIRSDGQLCIISNSIIQQRDVRNASRAEF 215
BLAST of jgi.p|Trimin1|130634 vs. uniprot
Match: A0A835YRB7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRB7_9STRA) HSP 1 Score: 242 bits (617), Expect = 8.730e-80 Identity = 118/154 (76.62%), Postives = 137/154 (88.96%), Query Frame = 1 Query: 1 IDHKRFEKALYKATDSRTALKRTLHDYMRIMGKLEVGLGVLSCIVMGLVCGIILDVNFVQAGTTWLTLALAFSFCFGDTVKRLFEGLVLVFVWNPYGISDRVFINDDNKVEMNLVVTKINLLNTEFIRSDGQLCIISNSIIQQRDVRNASRAEF 462 IDHK FE+ALYKATDSR+ALK TL YM+IM KL+ G VLSCI++ +VC I+L V+FV+A TWLTL LAF FCFGDTV+RLFEGLVLVFVW+P+G++DRVFINDDN +EMN VV+KINLLNTEFIRSDGQLCI+SNS+IQQRDVRNASRAEF Sbjct: 1 IDHKTFERALYKATDSRSALKSTLQCYMKIMTKLKAGFTVLSCILLAVVCAIVLGVDFVKASPTWLTLVLAFGFCFGDTVRRLFEGLVLVFVWHPFGVADRVFINDDNNMEMNFVVSKINLLNTEFIRSDGQLCILSNSVIQQRDVRNASRAEF 154
BLAST of jgi.p|Trimin1|130634 vs. uniprot
Match: A0A836CK56_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK56_9STRA) HSP 1 Score: 160 bits (405), Expect = 1.440e-44 Identity = 78/149 (52.35%), Postives = 104/149 (69.80%), Query Frame = 1 Query: 16 FEKALYKATDSRTALKRTLHDYMRIMGKLEVGLGVLSCIVMGLVCGIILDVNFVQAGTTWLTLALAFSFCFGDTVKRLFEGLVLVFVWNPYGISDRVFINDDNKVEMNLVVTKINLLNTEFIRSDGQLCIISNSIIQQRDVRNASRAEF 462 F KA+ + DSR ALK TL DY+ I+ KL+ L VL+ +V+ ++C II V+ + GTTWLT LAFSF FGDT +++FEG +LVF+W Y +SDR+ I DD+ NL VTKI+LL TE +R DG + ++SNS IQ RD+RN SR F Sbjct: 181 FLKAVVRTMDSRIALKATLDDYISIVMKLDAALSVLAALVLLIICCIIAGVDLMTTGTTWLTFILAFSFLFGDTARKMFEGFILVFIWQAYAVSDRILIQDDSNEVQNLTVTKISLLTTELLRGDGMVYVMSNSAIQARDIRNISRGSF 329
BLAST of jgi.p|Trimin1|130634 vs. uniprot
Match: A0A1Y1YFR3_9FUNG (EF-hand domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YFR3_9FUNG) HSP 1 Score: 77.0 bits (188), Expect = 8.280e-14 Identity = 45/136 (33.09%), Postives = 77/136 (56.62%), Query Frame = 1 Query: 49 RTALKRTLHDYMRIMGKLEVGLGVLSCIVMGLVCGIILDVNFVQAGTTWLTLALAFSFCFGDTVKRLFEGLVLVFVWNPYGISDRVFINDDNKVEMNLVVTKINLLNTEFIRSDGQLCIISNSIIQQRDVRNASRA 456 R AL + D + +GKL+ V + IV+ + C ++ D + V+ ++ LA +F FG T LF+ ++ VFV +PY DRVF++ DN L+V K+ LL+T F+++DGQ+ N ++ + + N R+ Sbjct: 84 RKALMIGMRDMSQAVGKLDRIFLVFAFIVLFIACCMLFDNSIVKTLIPLGSMFLALTFVFGSTAASLFKSIIFVFVTHPYDAGDRVFLDGDN-----LMVFKVGLLSTIFVKADGQMIYAPNEVMCTKFIHNIRRS 214
BLAST of jgi.p|Trimin1|130634 vs. uniprot
Match: A0A0L0UY58_9BASI (EF-hand domain-containing protein n=3 Tax=Puccinia striiformis TaxID=27350 RepID=A0A0L0UY58_9BASI) HSP 1 Score: 73.2 bits (178), Expect = 3.630e-12 Identity = 45/143 (31.47%), Postives = 82/143 (57.34%), Query Frame = 1 Query: 28 LYKATDSRTALKRTLHDYMRIMGKLEVGLGVLSCIVMGLVCGIILDVNFVQAGTTWLTLALAFSFCFGDTVKRLFEGLVLVFVWNPYGISDRVFINDDNKVEMNLVVTKINLLNTEFIRSDGQLCIISNSIIQQRDVRNASRA 456 +++A R AL +L D +G+L+ + +S IV + I+ +++ +A T+ T+ +A +F F +T +F+ +++VF +PY DRV +++D VE LVV ++ LL T F+R DG NS++ Q+ + N R+ Sbjct: 563 IFRAYKERRALANSLQDVSHAIGRLDRIMMAMSGIVFIFIALSIVGIDYSKALTSVYTVGIAAAFIFKETAGNVFDAIIMVFCTHPYDTGDRVIMDNDG-VEEVLVVKRMGLLVTVFLRWDGTEWFAPNSLLGQKFIINLRRS 704
BLAST of jgi.p|Trimin1|130634 vs. uniprot
Match: A0A8H7PGE9_9FUNG (EF-hand domain-containing protein n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7PGE9_9FUNG) HSP 1 Score: 72.0 bits (175), Expect = 9.140e-12 Identity = 43/136 (31.62%), Postives = 73/136 (53.68%), Query Frame = 1 Query: 49 RTALKRTLHDYMRIMGKLEVGLGVLSCIVMGLVCGIILDVNFVQAGTTWLTLALAFSFCFGDTVKRLFEGLVLVFVWNPYGISDRVFINDDNKVEMNLVVTKINLLNTEFIRSDGQLCIISNSIIQQRDVRNASRA 456 R L ++ D + GKL+V L ++ I+ ++ +N + T+ +A SF FG++ K +FE ++ +FV +PY I DRVFI +N V + LL T F++ DG + + NSI+ + + N SR+ Sbjct: 575 RKLLSASMRDLSQASGKLDVILLTIAAIIWAVIVCSCFGINVGTSLMPLWTMFVAVSFIFGNSAKDMFESIIFIFVTHPYDIGDRVFIGTEN-----WQVKSMGLLITTFLKWDGTIVYVKNSILAPQYIFNVSRS 705
BLAST of jgi.p|Trimin1|130634 vs. uniprot
Match: A0A1R1YHE5_9FUNG (Mechanosensitive ion channel protein 8 n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1YHE5_9FUNG) HSP 1 Score: 71.2 bits (173), Expect = 1.470e-11 Identity = 46/151 (30.46%), Postives = 85/151 (56.29%), Query Frame = 1 Query: 16 FEKALYKATDSRTALKRTLHDYMRIMGKLEVGLGVLSCIVMGLVCG---IILDVNFVQAGTTWLTLALAFSFCFGDTVKRLFEGLVLVFVWNPYGISDRVFINDDNKVEMNLVVTKINLLNTEFIRSDGQLCIISNSIIQQRDVRNASRAE 459 F++ + + + A+K D ++GK+ L C+V+ ++ +IL N ++ ++ +LA+A+SF FG+++K F+ + +F+ NPY I D V+I+ N +VV K+ LL+T F + DGQ I N ++ Q+ + N R+E Sbjct: 262 FQQTFIEYYNEKGAIKGIFGDMSDVLGKVN---NFLLCVVLLIIFVFLLVILTFNPLKNILSFGSLAIAWSFIFGNSLKTSFDCFIFLFMVNPYDIGDHVYIDLQN-----MVVKKVRLLSTIFEKLDGQYITIPNIVLSQKSIINFRRSE 404
BLAST of jgi.p|Trimin1|130634 vs. uniprot
Match: A0A1R1YQ66_9FUNG (Mechanosensitive ion channel protein 10 n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1YQ66_9FUNG) HSP 1 Score: 71.2 bits (173), Expect = 1.540e-11 Identity = 43/148 (29.05%), Postives = 84/148 (56.76%), Query Frame = 1 Query: 16 FEKALYKATDSRTALKRTLHDYMRIMGKLEVGLGVLSCIVMGLVCGIILDVNFVQAGTTWLTLALAFSFCFGDTVKRLFEGLVLVFVWNPYGISDRVFINDDNKVEMNLVVTKINLLNTEFIRSDGQLCIISNSIIQQRDVRNASRAE 459 F++ + + + A+K D ++GK+ L + +++ + +IL N ++ ++ +LA+A+SF FG+++K F+ + +F+ NPY I D V+I+ N ++V K+ LL+T F + DGQ I N ++ Q+ + N R+E Sbjct: 345 FQQTFIEYYNEKGAIKGIFGDMSDVLGKVNRFLLCIVLLIIFVFLLVILTYNPLKNILSFGSLAIAWSFIFGNSLKTSFDCFIFLFMVNPYDIGDHVYIDLQN-----MIVKKVRLLSTIFEKLDGQYITIPNIVLSQKSIINFRRSE 487
BLAST of jgi.p|Trimin1|130634 vs. uniprot
Match: A0A8H7U854_MORIS (EF-hand domain-containing protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7U854_MORIS) HSP 1 Score: 71.2 bits (173), Expect = 1.700e-11 Identity = 42/136 (30.88%), Postives = 72/136 (52.94%), Query Frame = 1 Query: 49 RTALKRTLHDYMRIMGKLEVGLGVLSCIVMGLVCGIILDVNFVQAGTTWLTLALAFSFCFGDTVKRLFEGLVLVFVWNPYGISDRVFINDDNKVEMNLVVTKINLLNTEFIRSDGQLCIISNSIIQQRDVRNASRA 456 R L ++ D + GKL++ L ++ ++ ++ +N + T+ +A SF FG++ K +FE ++ +FV +PY I DRVFI +N V + LL T F++ DG + + NSI+ + N SRA Sbjct: 591 RKLLSASMRDLSQASGKLDMILLTIAVVIWAVIVCACFGINVGTSLMPLWTMFVAVSFIFGNSAKDMFESIIFIFVLHPYDIGDRVFIGTEN-----WQVKSMGLLMTTFLKWDGTIVYVKNSILAPLYILNVSRA 721 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|130634 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_15280 ID=mRNA_15280|Name=jgi.p|Trimin1|130634|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=462bp|location=Sequence derived from alignment at Contig_128:18283..18744+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATTGACCACAAGCGCTTCGAGAAGGCATTGTATAAGGCTACTGACAGCCGback to top protein sequence of jgi.p|Trimin1|130634 >Trimin1|130634|gw1.128.5.1 ID=Trimin1|130634|gw1.128.5.1|Name=jgi.p|Trimin1|130634|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=154bp IDHKRFEKALYKATDSRTALKRTLHDYMRIMGKLEVGLGVLSCIVMGLVCback to top mRNA from alignment at Contig_128:18283..18744+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_15280 ID=mRNA_15280|Name=jgi.p|Trimin1|130634|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=462bp|location=Sequence derived from alignment at Contig_128:18283..18744+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_128:18283..18744+ >mRNA_15280 ID=mRNA_15280|Name=jgi.p|Trimin1|130634|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=462bp|location=Sequence derived from alignment at Contig_128:18283..18744+ (Tribonema minus UTEX_B_3156 )back to top |