mRNA_1527 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|161950
Unique NamemRNA_1527
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|161950 vs. uniprot
Match: A0A835Z327_9STRA (Histidine kinase-like ATPase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z327_9STRA)

HSP 1 Score: 822 bits (2122), Expect = 4.600e-300
Identity = 411/431 (95.36%), Postives = 421/431 (97.68%), Query Frame = 1
Query:    1 MSAGEGSFYSDWRVLQPDGSTIHLKCRAEVCTAESSGEKHLVGICLDISETVRLSRDVVEAERHSESRLFQLIRTTCHEIRNPLQGMIGCAETQLLLLEKVMGSSKTNDDMANIMAELKSLASDIHACANHQACVITDLLDFEREISDAPQPVCCATNITHAHNTSLVLHIPKQLWVSTDVRLTKRIMINLVSNAVKFTDNGTIHISAQHKSDTLTMEVSDNGCGIPDDFKKNIFHVTGCTSQSEYITGSGLGLCIVNQLTNSLGGTISFKDNKPKGTVFTLVVPCEPSLPGSPDMASKDSWTSDDPCFSELDIVVADDNIVNRKVLSRMLQTSFRQVIVVEDGALAVATFESNNPSFVILDVHMPIMDGLKAASIIRKADASVPIIFLTGEIGDSLVNVVHQLKPSQLLLKPVSKNKLLHELKQFRLQNK 1293
            MSAGEGSFYSDWRVLQPDGSTIHLKCRAEVCT+ESSGEKHLVGICLDISETVRLSRD+VEAERHSESRLFQLIRTTCHEIRNPLQGMIGCAETQLLLLEKVMGSSKT+DDMANIMA+LKSLASDIHACANHQACVITDLLDFEREISDAPQPVCCATNITHAHNTSLVLHIPKQLWVSTDVRLTKRIMINLVSNAVKFTDNGTIHISAQH SD LTMEVSDNGCGIPDDFKKNIFHVTGCTSQSEYITGSGLGLCIV QLTNSLGGTISFKDNKPKGTVFTLVVPCEPSLPGSPDMASKDSWTSDDPCFSELDIVVADDNIVNRKVLSRMLQ SFRQVIVVEDGALA+A F+SNN SFVILDVHMPIMDGLKAASIIRKADASVPIIFLTGEIGDSLV+VV  + P+QLLLKPVSK+KLLHELKQFRL NK
Sbjct:    1 MSAGEGSFYSDWRVLQPDGSTIHLKCRAEVCTSESSGEKHLVGICLDISETVRLSRDIVEAERHSESRLFQLIRTTCHEIRNPLQGMIGCAETQLLLLEKVMGSSKTDDDMANIMADLKSLASDIHACANHQACVITDLLDFEREISDAPQPVCCATNITHAHNTSLVLHIPKQLWVSTDVRLTKRIMINLVSNAVKFTDNGTIHISAQHNSDGLTMEVSDNGCGIPDDFKKNIFHVTGCTSQSEYITGSGLGLCIVKQLTNSLGGTISFKDNKPKGTVFTLVVPCEPSLPGSPDMASKDSWTSDDPCFSELDIVVADDNIVNRKVLSRMLQASFRQVIVVEDGALAIAAFKSNNASFVILDVHMPIMDGLKAASIIRKADASVPIIFLTGEIGDSLVDVVKAMAPAQLLLKPVSKSKLLHELKQFRLHNK 431          
BLAST of jgi.p|Trimin1|161950 vs. uniprot
Match: A0A835ZPN3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZPN3_9STRA)

HSP 1 Score: 181 bits (460), Expect = 2.040e-46
Identity = 146/411 (35.52%), Postives = 204/411 (49.64%), Query Frame = 1
Query:  100 ESSGEKHLVGICLDISETVRLSRDVVE-------AERHSESRLFQLIRTTCHEIRNPLQGMIGCAETQLLLLEKVMGSSKTNDDMANIMAELKSLASDIHACANHQACVITDLLDFE-------------REISDAPQPVCCATNI--THAHN--TSLVLHIPK-QLWVSTDVRLTKRIMINLVSNAVKFTDNG--TIHISAQHKSDTLTMEVSDNGCGIPDDFKKNIFHVTGCTS-QSEYITGSGLGLCIVNQLTNSLGGTISFKDNKPKGTVFTLVVPCEPS-LPGSPDMASKD-------------------SWTSDDPCFSELDIVVADDNIVNRKVLSRMLQTSFRQVIVVEDGALAVATFESNNPSFV-ILDVHMPIMDGLKAASIIRKADASVPIIFLTGEIGD 1185
            ++ G + +VG  +DI+E   +     E        E    S    LI  T +   + LQG  G A+T              + + A+++   +S   D+  CA+HQ  VI DLLD+E             RE+ D        + I  + A N    LV ++P     ++TD +  KRI++N VSNAVKFTD G  T+ I+       L M VSD G GIPD+F+  +FH  G T+  ++Y++GSGLGL I   L + LGG++SF DN P+GTV    +P +P  L  S   AS D                     T          ++VA+DN +N KVL RML+     + +V DGA AV  FE + P  V ILDVHMP M G +AA+ IR+  +SVPIIFLTG+  D
Sbjct:  126 KADGTRSMVGTVMDITELKNMQDREAEHVVLKKTLEAGILSNTQTLISMTANLGPDQLQG--GPADTP-------------HTNRADVV---RSTLDDLLECAHHQLMVINDLLDYEMVTTAAASKVARPREVVDIDAMAASVSRIFSSSARNKMVKLVHNVPHVHRMINTDEQAVKRILMNFVSNAVKFTDEGSVTVEIALDIDKCELKMVVSDTGRGIPDEFRDLLFHTMGLTTTNTDYVSGSGLGLAICKSLADGLGGSVSFHDNAPRGTVMICTLPLQPEDLCLSTSTASADVPEHPVSLAELRRNSLNVAGATGALGALRRSRVLVAEDNRINCKVLRRMLEGECADLKMVNDGAAAVDQFEHDGPFDVCILDVHMPKMGGKEAAARIRQLASSVPIIFLTGKCND 518          
BLAST of jgi.p|Trimin1|161950 vs. uniprot
Match: A0A3R8TJR3_9GAMM (Histidine kinase n=4 Tax=Pseudoalteromonas TaxID=53246 RepID=A0A3R8TJR3_9GAMM)

HSP 1 Score: 161 bits (408), Expect = 1.290e-39
Identity = 117/417 (28.06%), Postives = 197/417 (47.24%), Query Frame = 1
Query:    7 AGEGSFYSDWRVLQPDGSTIHLKCRAEVCTAESSGEKHLVGICLDISETVR---LSRDVVEAERHSESRLFQLIRTTCHEIRNPLQGMIGCAETQLLLLEKVMGSSKTNDDMANIMAELKSLASDIHACANHQACVITDLLDFER------EISDAPQPVCCATN--------ITHAHNTSLVLHIPKQL---WVSTDVRLTKRIMINLVSNAVKFTDNGTIHISA----QHKSDTLTMEVSDNGCGIPDDFKKNIFH--VTGCTSQSEYITGSGLGLCIVNQLTNSLGGTISFKDNKPKGTVFTLVVPCEPSLPGSPDMASKDSWTSDDPCFSELDIVVADDNIVNRKVLSRMLQTSFRQVIVVEDGALAVATFESNNPSFVILDVHMPIMDGLKAASIIRKADASVPIIFLTGEI 1179
            AG G +  ++RV+ P+G    +K  A++   + +    +VG+  D++E ++   +S     A  HS       +    HEIR P+  ++G     L LLE     S     + N +   KSL +           +I D+LD+ +      E+  AP  +    +        +        V++I K     W+   VR+ K+I++NL SNAVKFT  G + I+A     + +  + + + D+G G+ +  +K IF       TS +    G+GLG+ I   L   + GTI+      KGT   + +P E S   S    +K       P    L+I++A+DN +N+ ++  ML+ +   + VVE+G LAV     N+   +++D+HMP+MDG+ A   IRK D  +P+I LT  +
Sbjct:  373 AGTGEYEPEFRVVHPNGDIRTIKASAQIIRDKDNKPTRVVGVNYDVTEKIKAIEVSETARLAAEHSSKAKSDFLANMSHEIRTPMNAILG----GLQLLENASLDSDLRKVLTNAIFSAKSLLT-----------IINDILDYSKIESNKIELESAPISIRNILDSVKYDLDALVSNKGVDFVVNIDKHFEDGWLGDLVRV-KQIILNLASNAVKFTHKGKVSITATNVIHNNNAAIHLSIQDSGIGMDEQTQKRIFERFSQADTSTTRQYGGTGLGMSITVNLIKLMNGTINLTSKAGKGTTVDVTLPLEQSNSQSQVTQTK---ALTPPNLQNLEILIAEDNPINQILVKTMLKETGAIITVVENGDLAVKACRENSFHLILMDIHMPVMDGVDAIKAIRKLDIKIPVIALTANV 770          
BLAST of jgi.p|Trimin1|161950 vs. uniprot
Match: A0A0P7E0Q3_9GAMM (Histidine kinase n=1 Tax=Pseudoalteromonas lipolytica TaxID=570156 RepID=A0A0P7E0Q3_9GAMM)

HSP 1 Score: 158 bits (400), Expect = 1.520e-38
Identity = 122/452 (26.99%), Postives = 219/452 (48.45%), Query Frame = 1
Query:   10 GEGSFYSDWRVLQPDGSTIHLKCRAEVCTAESSGEKHLVGICLDISETVRLSRDVVEAERHSESRL---FQLIRTTCHEIRNPLQGMIGCAETQLLLLEKVMGSSKTNDDMANIMAELKSLASDIHACANHQACVITDLLDFEREISDAPQPVCCATNITHA------------HNTSLVLHIPK-----QLWVSTDVRLTKRIMINLVSNAVKFTDNGTIHISAQHK----SDTLTMEVSDNGCGIPDDFKKNIFH--VTGCTSQSEYITGSGLGLCIVNQLTNSLGGTISFKDNKPKGTVFTLVVPCEPSLPGSPDMASKDSWTSD--DPCFSELDIVVADDNIVNRKVLSRMLQTSFRQVIVVEDGALAVATFESNNPSFVILDVHMPIMDGLKAASIIRKADASVPIIFLTGEI-GDSLVNVVHQLKPSQLLLKPVSKNKLLHELKQF 1278
            GEG +  ++RV+ P+G    +K  AEV          ++G+  D++E V   + + EA+  +E+ +      +    HEIR P+  ++G     L LL+            A +  ELK++ S+    A     +I D+LD+ +  S+  Q      ++T               N  +   + K       W+   VR+ K+I++NL SNAVKFT+ G++ ++   +     D + ++V D+G G+ ++  + IF       TS +    G+GLG+ I   L   +GG I  +    KGT  ++++P +       DM SK+        P  S   I+VA+DN +N+ ++  ML+++  +V +VE+G LA+   +  +   V++D+HMP MDG++A   +++    +P+I LT  +  D + N + Q   + +  KP+  N+L   LK F
Sbjct:  375 GEGVYDPEFRVVHPNGDIKVIKASAEVIRDTDGKAVKVIGVNYDVTEKVNAIQVLYEAKLAAENAVKAKSDFLANMSHEIRTPMNAILG----GLQLLQD-----------AKLSRELKTVLSNASFSAQSLLTIINDILDYSKIESNNLQLEQIQFSLTEVLESVKYDLDGQVSNKQIQFIVNKGERYKDYWLGDLVRV-KQIILNLASNAVKFTEKGSVKVNIDSRPYSGKDAIYIQVIDSGIGMTEEAAQRIFERFAQADTSTTRKYGGTGLGMSITTNLIKMMGGEIDVQSQLDKGTTVSVILPLQ-----EVDMVSKEKAKKSLSAPDLSSKQILVAEDNAINQVLIQSMLKSTKAKVTIVENGQLAIDEVKKGSYDIVLMDIHMPEMDGVEAQKQLKQLFPKLPVIALTANVMKDDVENYIQQGFVAHIA-KPIDINQLYGSLKHF 804          
BLAST of jgi.p|Trimin1|161950 vs. uniprot
Match: C3L4M4_AMOA5 (Non-specific serine/threonine protein kinase n=2 Tax=Candidatus Amoebophilus asiaticus TaxID=281120 RepID=C3L4M4_AMOA5)

HSP 1 Score: 158 bits (400), Expect = 2.780e-38
Identity = 139/471 (29.51%), Postives = 221/471 (46.92%), Query Frame = 1
Query:   31 DWRVLQPDGSTIHLKCRAEVCTAESSGEK-HLVGICLDISETVRLSRDVVEA---------ERHSESRLF-----QLIRTTCHEIRNPLQGMIGCAETQLLLLEKVMGSSKTNDDM-ANIMAELKSLA-------SDIHACANHQACVITDLLDFER------EISDAP--------QPVCCATNITHAHNTSLVLHIPKQ-LWVSTDVRLTKRIMINLVSNAVKFTDNGTIHISAQHKS-DT----LTMEVSDNGCGIPDDFKKNIFHVTGCTSQSEYITGSGLGLCIVNQLTNSLGGTISFKDNKPKGTVFTLVVPCEPSLPGSPDMASKDSWTSDD-PCFSELDIVVADDNIVNRKVLSRMLQTSFRQVIVVEDGALA---------VATFESNNPS---FVILDVHMPIMDGLKAASIIRKADA-----SVPIIFLTGEIGDSLVNVVHQLKPSQLLLKPVSKNKLL 1260
            D+RV+ PDGS   +    +V    +SG    + G+CLDI+E  +L +D +EA         +R  E+  +     + I T CHEIRNP+ G+   + T + L EK+    K  + +  +   ELK L          I  C NHQ  VI  +L+  R      ++   P        + +   T+       +L++ +PKQ + +  D    K I+INL+SNA+KFT+ G I IS Q ++ D+    L + V D G G+  + +  +F        S+Y  GSGLGL I  +L + +GGTI     K +G+ FT+ + CE    G   +  K        P  +   I++ +DNIVN+K+L R L+ +    +V ++G  A         V T E  N +    +++D+ MP+M G++A   IRK +      S+PII L+    +       +        KP  K +LL
Sbjct: 1797 DYRVIWPDGSQHMITAHGQVYRDTTSGSPIKMTGVCLDITERKKLEQDRLEALQQAKEKEQQRADEAERYFKQQEEFINTVCHEIRNPMNGI---SNTVVFLEEKITSLKKLKESLPGSFQPELKELLPTLEEDIQTIQHCVNHQLVVINGVLNLSRLEAGKEKLLLKPFKPKTIIEESILLFTSQLKTKQLNLIIDLPKQAIAIQGDPERFKMILINLISNAIKFTEKGHIKISFQTQAVDSTHVELVIRVEDTGIGMTPEEQSCLFQRFSRPLSSQY-EGSGLGLAISKKLLDLMGGTIQVDSVKGQGSTFTIHLTCEMVDIGEKLIYQKPPAPLPILPPIAVKHILIVEDNIVNQKILRRQLEAAGYTCMVADNGQKAIEAIGAIEEVETLEQWNLAAFDLILMDLEMPVMGGIEATGWIRKKEQQLGVPSIPIIGLSAYAEEIYGETAKKAGMDAYNTKPYRKEELL 2263          
BLAST of jgi.p|Trimin1|161950 vs. uniprot
Match: A0A4Z0SYV8_9GAMM (Histidine kinase n=4 Tax=unclassified Pseudoalteromonas TaxID=194690 RepID=A0A4Z0SYV8_9GAMM)

HSP 1 Score: 157 bits (396), Expect = 5.180e-38
Identity = 117/419 (27.92%), Postives = 205/419 (48.93%), Query Frame = 1
Query:    4 SAGEGSFYS-DWRVLQPDGSTIHLKCRAEVCTAESSGEKHLVGICLDISETVRL---SRDVVEAERHSESRLFQLIRTTCHEIRNPLQGMIGCAETQLLLLEKVMGSSKTNDDMANIMAELKSLASDIHACANHQACVITDLLDFER------EISDAPQPVCCATNITHAHNTSLV--------LHIPKQL---WVSTDVRLTKRIMINLVSNAVKFTDNGTIHISA---QHKSD-TLTMEVSDNGCGIPDDFKKNIFH--VTGCTSQSEYITGSGLGLCIVNQLTNSLGGTISFKDNKPKGTVFTLVVPCEPSLPGSPDMASKDSWTSDDPCFSELDIVVADDNIVNRKVLSRMLQTSFRQVIVVEDGALAVATFESNNPSFVILDVHMPIMDGLKAASIIRKADASVPIIFLTGEI 1179
            S  +G+ Y  ++RV+ PDG    LK  A V   +      ++G+  D+++ ++    S +   A  ++       +    HEIR P+  ++G    QLL             D A +  +L+ +  +  + A     +I D+LD+ +      EI   P  +    N       +L+        + + K     W+   VR+ K+I++NL SNAVKFT+ G + I+    +HKS  T+ ++V D+G G+ ++ +  IF       TS +    G+GLG+ I   L   +GG I+    K +GT+  + +P E +   +P      S T   P  S   I++A+DN +N+ ++  MLQ +   +++VE+G LAV  F++     V++D+HMP+MDG++A   I+  + S+PII LT  +
Sbjct:  374 SIEKGALYEPEFRVVHPDGKIRTLKASARVIRDKWGTPLKVIGVSYDVTDKIQAIETSENARVAAENASKIKSDFLANMSHEIRTPMNAILG--GLQLL-------------DNAELSTDLRKILVNATSSAKSLLTIINDILDYSKVESNKIEIEKMPLSIVDILNSVKYDLDALISNQQIDFKIDVSKNFHDNWLGDQVRV-KQIILNLASNAVKFTNQGCVKIAVDCIEHKSQQTILIKVEDSGIGMSEEAQGRIFERFSQADTSTTREYGGTGLGMSITISLVKLMGGEIAVNSIKGRGTIIDVTLPLEKTHV-APKKVKAQSCTP--PALSGKRILIAEDNKINQMLIKTMLQETESSLVIVENGMLAVDAFKNQPFDLVLMDIHMPVMDGVEALKSIKTLNNSIPIIALTANV 773          
BLAST of jgi.p|Trimin1|161950 vs. uniprot
Match: V4HIG7_9GAMM (Histidine kinase n=3 Tax=Pseudoalteromonas TaxID=53246 RepID=V4HIG7_9GAMM)

HSP 1 Score: 154 bits (390), Expect = 7.540e-38
Identity = 122/396 (30.81%), Postives = 202/396 (51.01%), Query Frame = 1
Query:  175 VEAERHSESRLFQLIRTTCHEIRNPLQGMIGCAETQLLLLEKVMGSSKTNDDMANIMAELKSLASDIHACANHQACVITDLLDFER-------------EISDAPQPVCCATNITHAHNTSLVLHIPKQLWVSTDVRL-----TKRIMINLVSNAVKFTDNGTIHI---SAQHKSDT-LTMEVSDNGCGIPDDFKKNIFH--VTGCTSQSEYITGSGLGLCIVNQLTNSLGGTISFKDNKPKGTVFTLVVPCEPSLPGSPDMASKDSWTSDDPCFSELDIVVADDNIVNRKVLSRMLQTSFRQVIVVEDGALAVATFESNNPSFVILDVHMPIMDGLKAASIIRKADASVPIIFLTGEIGDSLVNVVHQLKPSQLLLKPVSKNKLLHELKQFRLQN 1290
            ++AE+ S+++  + +    HEIR P+ G++G     L + EK            N+  E KSL S     A     VI D+LDF +              +SD  + V     +  A   S+ LH    L  S+D RL      ++I++NLVSNAVKFTD+G I I   + Q++ ++ L + V D G G+  + +++IF       +S +    G+GLGL I   L   +GGTI+ K  + KGT   +++P   +    PD   K+      P F+ L I++A+DN +N+ V+S+ML+ +   + VVE+G LAV  F  ++   V++D+ MP MDG++A  +I+K + ++P+I LT  +    +     L  +  + KPV+ + +   + Q   QN
Sbjct:  197 IKAEQASKAK-SEFLANMSHEIRTPMNGILGA----LQIFEK-----------GNLDEESKSLMSKAVYSAQSLLTVINDILDFSKIEAHKLTLEVAPFSMSDTVESVVSDLKV-EADKKSISLHASYDLG-SSDGRLGDSVRVRQILLNLVSNAVKFTDSGGIKIELHAIQYQGESALHIAVIDTGIGMDKNAQQSIFDRFQQADSSTTRKYGGTGLGLAITASLVRLMGGTINLKSEQGKGTTIDVILPLAQAELSDPD---KEGGEDQLPNFAALKILIAEDNEINQIVISKMLEKTGATMDVVENGKLAVEAFNQSSYDIVLMDIQMPEMDGIEAFMLIQKVNPNIPVIALTANVMSQDIAHYKSLGFAAHIGKPVAMHAMYRTINQSVKQN 571          
BLAST of jgi.p|Trimin1|161950 vs. uniprot
Match: A0A166YYS6_9GAMM (Histidine kinase n=2 Tax=Pseudoalteromonas luteoviolacea TaxID=43657 RepID=A0A166YYS6_9GAMM)

HSP 1 Score: 154 bits (389), Expect = 5.560e-37
Identity = 123/438 (28.08%), Postives = 215/438 (49.09%), Query Frame = 1
Query:   10 GEGSFYSDWRVLQPDGSTIHLKCRAEVCTAESSGEKHLVGICLDISETVRLSRDVVEAERHSESR---LFQLIRTTCHEIRNPLQGMIGCAETQLLLLEKVMGSSKTNDDMANIMAE-LKSLASDIHACANHQACVIT---DLLDFEREISDAPQPV-CCATNITHAHNTSLVLHIPKQL---WVSTDVRLTKRIMINLVSNAVKFTDNGTIHISAQ----HKSDTLTMEVSDNGCGIPDDFKKNIFH--VTGCTSQSEYITGSGLGLCIVNQLTNSLGGTISFKDNKPKGTVFTLVVPCEPSLPGSPDMASKDSWTSDDPCFSELDIVVADDNIVNRKVLSRMLQTSFRQVIVVEDGALAVATFESNNPSFVILDVHMPIMDGLKAASIIRKADASVPIIFLTGEIGDSLVNVVHQLKPSQLLLKPVSKNKLLHELK 1272
            G   + +++R+++PDG    +K  AEV T E      +VG+  D++E +     +  A++ +E         +    HEIR P+  ++GC   QL    K+     T  D A+  A+ L ++ +DI   +  ++  +T       FE+ +      +   A+N         + +I  +    W+   VR+ K++++NLVSNAVKFT  G + +S      +  + + + V D+G G+ +D +K IF       +S S    G+GLG+ I   L   +GG IS K    KGT  ++++P E S   + + +S+   +   P  S + I+VA+DN +N+ ++  ML+     V +VE+G  AV   ++     V++D+HMP MDG++A  +I+  D S+P++ LT  +    V    Q      + KP+  N L   LK
Sbjct:  505 GTAIYDTEFRIVRPDGVIRTMKASAEVITDEQGNALKVVGVNYDLTEKIEALETLAVAKQEAEKANRAKSDFLANMSHEIRTPMNAILGCL--QLFKNAKLDNELSTILDNASFSAQSLLTIINDILDYSKIESNKLTLEQAPFSFEQILDSVKYDLDALASN----KGIDFLFYIDDKFHDGWLGDLVRV-KQVLLNLVSNAVKFTHKGAVSVSVSSTKLNSKEAIRVVVIDSGIGMSEDAQKRIFDRFSQADSSTSRQYGGTGLGMSITVSLVKLMGGEISLKSEVNKGTEVSVILPLERS---NVEHSSQKQESVMPPDLSGMKILVAEDNKINQVLIRTMLKPCHAAVTLVENGLQAVNLVKNTAFDLVLMDIHMPEMDGVEAQRLIKSLDQSLPVVALTANVMSKDVQSYLQQGFVSHVGKPIDINNLYGVLK 932          
BLAST of jgi.p|Trimin1|161950 vs. uniprot
Match: UPI001AF81DED (ATP-binding protein n=1 Tax=Luteitalea sp. TBR-22 TaxID=2802971 RepID=UPI001AF81DED)

HSP 1 Score: 152 bits (385), Expect = 1.940e-36
Identity = 124/408 (30.39%), Postives = 203/408 (49.75%), Query Frame = 1
Query:    4 SAGEGSFYSDWRVLQPDGSTIHLKCRAEVCTAESSGEKHLVGICLDISETVRLSRDVVEAERHSESRLF---QLIRTTCHEIRNPLQGMIGCAETQLLLLEKVMGSSKTNDDMANIMAE-LKSLASDIHACANHQAC-VITDLLDFE--REISDAP---QPVCCATNITHAHNTSLVLHIPKQLWVSTDVRLTKRIMINLVSNAVKFTDNGTIHISAQHKSDT----LTMEVSDNGCGIPDDFKKNIFH--VTGCTSQSEYITGSGLGLCIVNQLTNSLGGTISFKDNKPKGTVFTLVVPCEPSLPGSPDMASKDSWTSDDPCFSELDIVVADDNIVNRKVLSRMLQTSFRQVIVVEDGALAVATFESNNPSFVILDVHMPIMDGLKAASIIRKA---DASVPIIFLT 1170
            S  E    + +R+++PDG   HL+   +V   ES G + L+G+ LD++  V L  ++ +    +ES      Q + T  HEIR P+ G++G  E  LLL   +         MA++ A  L  + +DI   +  +A  V+ + + FE  R + D      P     ++T A      L      W+  D    +++++NLV NA+KFT  G + +  + ++DT    L +EV D+G GI  + +  +F   V    S +    G+GLGL I  QL   +GG I  +    +G++F   VP   +   +  +  + + T+       L I+VA+DN+VN++++   L     +V++V DGA AVA  +      V++DV MP MDGL+A + IR     D +VPII LT
Sbjct:  553 SDSERLLEAQYRIVRPDGCVRHLRANGQVF--ESDGRRVLLGVNLDVTGDVELQHELNDQRLKAESATAAKAQFLATMSHEIRTPMNGVLGMLE--LLLRSDLTPEQHETATMAHVSASALLHILNDILDLSKLEAQQVVLETIAFEPSRLVGDTLALLSPRALEKHLTLASEVDPAL----PAWLEADPTRIRQVLLNLVGNAIKFTARGDVRVRLR-RADTHDTLLRVEVQDSGEGISPEVQARLFQRFVQADASTTRRHGGTGLGLAICRQLVELMGGEIGVESVPGEGSLFWFTVPVRVTQAPARRLDVQHA-TAPVALQLPLRILVAEDNLVNQRLVRAFLAPGRHEVVMVGDGAAAVAALDEGTYDVVLMDVQMPGMDGLQATAAIRARTTPDHAVPIIALT 950          
BLAST of jgi.p|Trimin1|161950 vs. uniprot
Match: UPI00191E5F39 (PAS domain-containing hybrid sensor histidine kinase/response regulator n=1 Tax=Marivirga atlantica TaxID=1548457 RepID=UPI00191E5F39)

HSP 1 Score: 149 bits (377), Expect = 3.320e-36
Identity = 114/387 (29.46%), Postives = 189/387 (48.84%), Query Frame = 1
Query:  139 DISETVRLSRDVVEAERHSESRLFQLIRTTCHEIRNPLQGMIGCAETQLLLLEKVMGSSKTNDDMANIMAE---LKSLASDI---HACANHQACVITDLLDFEREISDAPQPVCCATNITHAHNTSLVLHIPKQLWVSTDVRLTKRIMINLVSNAVKFTDNGTIHISAQHKSDTLTMEVSDNGCGIPDDFKKNIFHVTGCTSQS--EYITGSGLGLCIVNQLTNSLGGTISFKDNKPKGTVFTLVVPCEPSLPGSPDMASKDSWTSDDPCFSELDIVVADDNIVNRKVLSRMLQTSFRQVIVVEDGALAVATFESNNP-SFVILDVHMPIMDGLKAASIIRKADASVPIIFLTGEIGDSLVNVVHQLKPSQLLLKPVSKNKLLHELK 1272
            D+++ ++  +   E+     + L  +     HEIR PL  ++G +    LL  K +  S  +D + NI      L  L SDI       ++Q  +I +  +    I D  Q    +   + A   S+     ++  + TD     +I+INL++NA+KFT  G I I+ + K DTL   V D G GIP D ++NIF     T QS      GSGLGL IV  L   + G I  +    KG+ F   +P  P+   + ++ASK           +  ++V +DN VNR +L   L+    ++I   +G  A+   +S+N    V++D++MPIMDG +A  +I++ ++ + +I  TG   ++ +  + + +    L+KPV + KLL  LK
Sbjct:  170 DVTDLIKAQKKAQESNELKSAFLSNM----SHEIRTPLNAILGFSS---LLRNKNLSESSQDDYLRNIKQSGERLLRLISDIIDTSKIESNQISIIKENCNLNILIDDVIQQCSLSQRNSKAEIKSIKGLADEESHIITDCHRLTQILINLLTNALKFTKEGAITIAYEQKEDTLQFYVRDTGIGIPADQQENIFKRFSQTDQSGRNVKEGSGLGLSIVKGLLKLMEGEIWVESELGKGSCFYFSIPHNPTDTPTKNIASKTPLNKKFKALQDAVVLVVEDNEVNRFLLEAYLKDHIGKIIEAYNGQEAIELVKSHNDIDVVLMDINMPIMDGYEAVKLIKEYNSDITVIAQTGHAMEAEIQELKKSEFDDYLIKPVDEFKLLEMLK 549          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|161950 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z327_9STRA4.600e-30095.36Histidine kinase-like ATPase n=2 Tax=Tribonema min... [more]
A0A835ZPN3_9STRA2.040e-4635.52Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A3R8TJR3_9GAMM1.290e-3928.06Histidine kinase n=4 Tax=Pseudoalteromonas TaxID=5... [more]
A0A0P7E0Q3_9GAMM1.520e-3826.99Histidine kinase n=1 Tax=Pseudoalteromonas lipolyt... [more]
C3L4M4_AMOA52.780e-3829.51Non-specific serine/threonine protein kinase n=2 T... [more]
A0A4Z0SYV8_9GAMM5.180e-3827.92Histidine kinase n=4 Tax=unclassified Pseudoaltero... [more]
V4HIG7_9GAMM7.540e-3830.81Histidine kinase n=3 Tax=Pseudoalteromonas TaxID=5... [more]
A0A166YYS6_9GAMM5.560e-3728.08Histidine kinase n=2 Tax=Pseudoalteromonas luteovi... [more]
UPI001AF81DED1.940e-3630.39ATP-binding protein n=1 Tax=Luteitalea sp. TBR-22 ... [more]
UPI00191E5F393.320e-3629.46PAS domain-containing hybrid sensor histidine kina... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_18contigContig_18:1331164..1332501 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|161950|e_gw1.18.249.1
DescriptionHistidine kinase
COG categoryT
Max annot lvl1236|Gammaproteobacteria
EggNOG OGsCOG0642@1|root,COG5002@1|root,COG2205@2|Bacteria,COG5002@2|Bacteria,1NRP8@1224|Proteobacteria,1SKTW@1236|Gammaproteobacteria
Evalue6.07e-37
Seed ortholog156578.ATW7_06343
Hectar predicted targeting categoryother localisation
TranscriptId162272
TrackFilteredModels1
ProteinId161950
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|161950gene_1527Tribonema minus UTEX_B_3156 geneContig_18 1331164..1332501 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_1527_1exon_1527_1Tribonema minus UTEX_B_3156 exonContig_18 1331164..1331641 +
exon_1527_2exon_1527_2Tribonema minus UTEX_B_3156 exonContig_18 1331684..1332501 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_1527CDS_1527Tribonema minus UTEX_B_3156 CDSContig_18 1331164..1331641 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|161950Trimin1|161950|e_gw1.18.249.1Tribonema minus UTEX_B_3156 polypeptideContig_18 1331164..1332501 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_1527 ID=mRNA_1527|Name=jgi.p|Trimin1|161950|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1296bp|location=Sequence derived from alignment at Contig_18:1331164..1332501+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGTCAGCAGGCGAGGGGTCGTTCTATAGTGATTGGAGAGTATTGCAGCC
GGATGGCAGCACCATTCACTTGAAATGTCGTGCCGAAGTCTGTACCGCGG
AGTCTTCAGGAGAAAAGCATCTTGTAGGCATATGCTTGGACATTAGTGAA
ACTGTGAGGCTGTCAAGAGATGTTGTTGAAGCAGAGCGACATAGTGAGAG
CCGCCTGTTCCAGCTCATCCGCACTACCTGCCATGAAATACGCAACCCCC
TGCAGGGCATGATCGGATGCGCTGAAACGCAACTGCTATTGCTTGAGAAG
GTTATGGGCTCGAGCAAGACTAATGATGACATGGCAAACATCATGGCGGA
GCTCAAGTCACTGGCATCTGATATTCACGCTTGCGCAAATCACCAAGCGT
GTGTGATTACTGATTTACTGGATTTCGAGCGCGAGATCAGTGACGCACCA
CAACCAGTTTGCTGTGCAACCAACATCACACACGCACATAACACGTCGCT
GGTGCTTCACATACCGAAGCAACTATGGGTCTCTACAGATGTTCGATTGA
CGAAACGCATTATGATCAATCTAGTCTCCAACGCAGTCAAGTTCACAGAC
AATGGTACAATACATATCAGCGCGCAGCATAAGAGTGACACGCTAACTAT
GGAAGTGAGCGACAACGGATGTGGCATTCCTGATGATTTCAAGAAGAATA
TATTTCATGTGACCGGTTGCACCAGTCAGAGTGAGTATATTACAGGATCA
GGACTTGGTCTCTGTATCGTCAATCAACTCACCAATTCCCTAGGTGGCAC
CATTTCATTCAAGGACAACAAGCCCAAAGGGACCGTGTTCACTTTGGTGG
TGCCATGCGAGCCATCGCTTCCTGGTTCACCTGACATGGCATCCAAGGAT
AGCTGGACATCAGATGACCCGTGTTTCTCAGAGCTTGACATTGTCGTGGC
TGATGATAACATTGTCAACCGCAAGGTGCTTTCAAGGATGCTGCAGACGT
CATTTCGGCAAGTGATAGTAGTGGAAGATGGAGCCTTAGCGGTTGCTACC
TTTGAAAGCAACAATCCTAGCTTTGTCATACTCGATGTGCACATGCCAAT
TATGGACGGCTTGAAAGCAGCATCAATCATACGGAAAGCTGATGCTTCTG
TGCCAATCATTTTCCTGACGGGTGAAATTGGCGACTCATTGGTGAATGTA
GTCCACCAGCTGAAGCCATCGCAACTTTTGTTGAAACCTGTATCCAAGAA
CAAACTGCTTCATGAATTGAAACAATTTCGGCTCCAAAACAAGTGA
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protein sequence of jgi.p|Trimin1|161950

>Trimin1|161950|e_gw1.18.249.1 ID=Trimin1|161950|e_gw1.18.249.1|Name=jgi.p|Trimin1|161950|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=432bp
MSAGEGSFYSDWRVLQPDGSTIHLKCRAEVCTAESSGEKHLVGICLDISE
TVRLSRDVVEAERHSESRLFQLIRTTCHEIRNPLQGMIGCAETQLLLLEK
VMGSSKTNDDMANIMAELKSLASDIHACANHQACVITDLLDFEREISDAP
QPVCCATNITHAHNTSLVLHIPKQLWVSTDVRLTKRIMINLVSNAVKFTD
NGTIHISAQHKSDTLTMEVSDNGCGIPDDFKKNIFHVTGCTSQSEYITGS
GLGLCIVNQLTNSLGGTISFKDNKPKGTVFTLVVPCEPSLPGSPDMASKD
SWTSDDPCFSELDIVVADDNIVNRKVLSRMLQTSFRQVIVVEDGALAVAT
FESNNPSFVILDVHMPIMDGLKAASIIRKADASVPIIFLTGEIGDSLVNV
VHQLKPSQLLLKPVSKNKLLHELKQFRLQNK*
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mRNA from alignment at Contig_18:1331164..1332501+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_1527 ID=mRNA_1527|Name=jgi.p|Trimin1|161950|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1338bp|location=Sequence derived from alignment at Contig_18:1331164..1332501+ (Tribonema minus UTEX_B_3156 )
ATGTCAGCAGGCGAGGGGTCGTTCTATAGTGATTGGAGAGTATTGCAGCC GGATGGCAGCACCATTCACTTGAAATGTCGTGCCGAAGTCTGTACCGCGG AGTCTTCAGGAGAAAAGCATCTTGTAGGCATATGCTTGGACATTAGTGAA ACTGTGAGGCTGTCAAGAGATGTTGTTGAAGCAGAGCGACATAGTGAGAG CCGCCTGTTCCAGCTCATCCGCACTACCTGCCATGAAATACGCAACCCCC TGCAGGGCATGATCGGATGCGCTGAAACGCAACTGCTATTGCTTGAGAAG GTTATGGGCTCGAGCAAGACTAATGATGACATGGCAAACATCATGGCGGA GCTCAAGTCACTGGCATCTGATATTCACGCTTGCGCAAATCACCAAGCGT GTGTGATTACTGATTTACTGGATTTCGAGCGCGAGATCAGTGACGCACCA CAACCAGTTTGCTGTGCAACCAACATCAGTCACATGCTGCGAGACGTCTA CTTGATGTTCCAGCATGCAGCACACGCACATAACACGTCGCTGGTGCTTC ACATACCGAAGCAACTATGGGTCTCTACAGATGTTCGATTGACGAAACGC ATTATGATCAATCTAGTCTCCAACGCAGTCAAGTTCACAGACAATGGTAC AATACATATCAGCGCGCAGCATAAGAGTGACACGCTAACTATGGAAGTGA GCGACAACGGATGTGGCATTCCTGATGATTTCAAGAAGAATATATTTCAT GTGACCGGTTGCACCAGTCAGAGTGAGTATATTACAGGATCAGGACTTGG TCTCTGTATCGTCAATCAACTCACCAATTCCCTAGGTGGCACCATTTCAT TCAAGGACAACAAGCCCAAAGGGACCGTGTTCACTTTGGTGGTGCCATGC GAGCCATCGCTTCCTGGTTCACCTGACATGGCATCCAAGGATAGCTGGAC ATCAGATGACCCGTGTTTCTCAGAGCTTGACATTGTCGTGGCTGATGATA ACATTGTCAACCGCAAGGTGCTTTCAAGGATGCTGCAGACGTCATTTCGG CAAGTGATAGTAGTGGAAGATGGAGCCTTAGCGGTTGCTACCTTTGAAAG CAACAATCCTAGCTTTGTCATACTCGATGTGCACATGCCAATTATGGACG GCTTGAAAGCAGCATCAATCATACGGAAAGCTGATGCTTCTGTGCCAATC ATTTTCCTGACGGGTGAAATTGGCGACTCATTGGTGAATGTAGTCCACCA GCTGAAGCCATCGCAACTTTTGTTGAAACCTGTATCCAAGAACAAACTGC TTCATGAATTGAAACAATTTCGGCTCCAAAACAAGTGA
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Coding sequence (CDS) from alignment at Contig_18:1331164..1332501+

>mRNA_1527 ID=mRNA_1527|Name=jgi.p|Trimin1|161950|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1296bp|location=Sequence derived from alignment at Contig_18:1331164..1332501+ (Tribonema minus UTEX_B_3156 )
ATGTCAGCAGGCGAGGGGTCGTTCTATAGTGATTGGAGAGTATTGCAGCC
GGATGGCAGCACCATTCACTTGAAATGTCGTGCCGAAGTCTGTACCGCGG
AGTCTTCAGGAGAAAAGCATCTTGTAGGCATATGCTTGGACATTAGTGAA
ACTGTGAGGCTGTCAAGAGATGTTGTTGAAGCAGAGCGACATAGTGAGAG
CCGCCTGTTCCAGCTCATCCGCACTACCTGCCATGAAATACGCAACCCCC
TGCAGGGCATGATCGGATGCGCTGAAACGCAACTGCTATTGCTTGAGAAG
GTTATGGGCTCGAGCAAGACTAATGATGACATGGCAAACATCATGGCGGA
GCTCAAGTCACTGGCATCTGATATTCACGCTTGCGCAAATCACCAAGCGT
GTGTGATTACTGATTTACTGGATTTCGAGCGCGAGATCAGTGACGCACCA
CAACCAGTTTGCTGTGCAACCAACATCACACACGCACATAACACGTCGCT
GGTGCTTCACATACCGAAGCAACTATGGGTCTCTACAGATGTTCGATTGA
CGAAACGCATTATGATCAATCTAGTCTCCAACGCAGTCAAGTTCACAGAC
AATGGTACAATACATATCAGCGCGCAGCATAAGAGTGACACGCTAACTAT
GGAAGTGAGCGACAACGGATGTGGCATTCCTGATGATTTCAAGAAGAATA
TATTTCATGTGACCGGTTGCACCAGTCAGAGTGAGTATATTACAGGATCA
GGACTTGGTCTCTGTATCGTCAATCAACTCACCAATTCCCTAGGTGGCAC
CATTTCATTCAAGGACAACAAGCCCAAAGGGACCGTGTTCACTTTGGTGG
TGCCATGCGAGCCATCGCTTCCTGGTTCACCTGACATGGCATCCAAGGAT
AGCTGGACATCAGATGACCCGTGTTTCTCAGAGCTTGACATTGTCGTGGC
TGATGATAACATTGTCAACCGCAAGGTGCTTTCAAGGATGCTGCAGACGT
CATTTCGGCAAGTGATAGTAGTGGAAGATGGAGCCTTAGCGGTTGCTACC
TTTGAAAGCAACAATCCTAGCTTTGTCATACTCGATGTGCACATGCCAAT
TATGGACGGCTTGAAAGCAGCATCAATCATACGGAAAGCTGATGCTTCTG
TGCCAATCATTTTCCTGACGGGTGAAATTGGCGACTCATTGGTGAATGTA
GTCCACCAGCTGAAGCCATCGCAACTTTTGTTGAAACCTGTATCCAAGAA
CAAACTGCTTCATGAATTGAAACAATTTCGGCTCCAAAACAAGTGA
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