mRNA_1527 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|161950 vs. uniprot
Match: A0A835Z327_9STRA (Histidine kinase-like ATPase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z327_9STRA) HSP 1 Score: 822 bits (2122), Expect = 4.600e-300 Identity = 411/431 (95.36%), Postives = 421/431 (97.68%), Query Frame = 1 Query: 1 MSAGEGSFYSDWRVLQPDGSTIHLKCRAEVCTAESSGEKHLVGICLDISETVRLSRDVVEAERHSESRLFQLIRTTCHEIRNPLQGMIGCAETQLLLLEKVMGSSKTNDDMANIMAELKSLASDIHACANHQACVITDLLDFEREISDAPQPVCCATNITHAHNTSLVLHIPKQLWVSTDVRLTKRIMINLVSNAVKFTDNGTIHISAQHKSDTLTMEVSDNGCGIPDDFKKNIFHVTGCTSQSEYITGSGLGLCIVNQLTNSLGGTISFKDNKPKGTVFTLVVPCEPSLPGSPDMASKDSWTSDDPCFSELDIVVADDNIVNRKVLSRMLQTSFRQVIVVEDGALAVATFESNNPSFVILDVHMPIMDGLKAASIIRKADASVPIIFLTGEIGDSLVNVVHQLKPSQLLLKPVSKNKLLHELKQFRLQNK 1293 MSAGEGSFYSDWRVLQPDGSTIHLKCRAEVCT+ESSGEKHLVGICLDISETVRLSRD+VEAERHSESRLFQLIRTTCHEIRNPLQGMIGCAETQLLLLEKVMGSSKT+DDMANIMA+LKSLASDIHACANHQACVITDLLDFEREISDAPQPVCCATNITHAHNTSLVLHIPKQLWVSTDVRLTKRIMINLVSNAVKFTDNGTIHISAQH SD LTMEVSDNGCGIPDDFKKNIFHVTGCTSQSEYITGSGLGLCIV QLTNSLGGTISFKDNKPKGTVFTLVVPCEPSLPGSPDMASKDSWTSDDPCFSELDIVVADDNIVNRKVLSRMLQ SFRQVIVVEDGALA+A F+SNN SFVILDVHMPIMDGLKAASIIRKADASVPIIFLTGEIGDSLV+VV + P+QLLLKPVSK+KLLHELKQFRL NK Sbjct: 1 MSAGEGSFYSDWRVLQPDGSTIHLKCRAEVCTSESSGEKHLVGICLDISETVRLSRDIVEAERHSESRLFQLIRTTCHEIRNPLQGMIGCAETQLLLLEKVMGSSKTDDDMANIMADLKSLASDIHACANHQACVITDLLDFEREISDAPQPVCCATNITHAHNTSLVLHIPKQLWVSTDVRLTKRIMINLVSNAVKFTDNGTIHISAQHNSDGLTMEVSDNGCGIPDDFKKNIFHVTGCTSQSEYITGSGLGLCIVKQLTNSLGGTISFKDNKPKGTVFTLVVPCEPSLPGSPDMASKDSWTSDDPCFSELDIVVADDNIVNRKVLSRMLQASFRQVIVVEDGALAIAAFKSNNASFVILDVHMPIMDGLKAASIIRKADASVPIIFLTGEIGDSLVDVVKAMAPAQLLLKPVSKSKLLHELKQFRLHNK 431
BLAST of jgi.p|Trimin1|161950 vs. uniprot
Match: A0A835ZPN3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZPN3_9STRA) HSP 1 Score: 181 bits (460), Expect = 2.040e-46 Identity = 146/411 (35.52%), Postives = 204/411 (49.64%), Query Frame = 1 Query: 100 ESSGEKHLVGICLDISETVRLSRDVVE-------AERHSESRLFQLIRTTCHEIRNPLQGMIGCAETQLLLLEKVMGSSKTNDDMANIMAELKSLASDIHACANHQACVITDLLDFE-------------REISDAPQPVCCATNI--THAHN--TSLVLHIPK-QLWVSTDVRLTKRIMINLVSNAVKFTDNG--TIHISAQHKSDTLTMEVSDNGCGIPDDFKKNIFHVTGCTS-QSEYITGSGLGLCIVNQLTNSLGGTISFKDNKPKGTVFTLVVPCEPS-LPGSPDMASKD-------------------SWTSDDPCFSELDIVVADDNIVNRKVLSRMLQTSFRQVIVVEDGALAVATFESNNPSFV-ILDVHMPIMDGLKAASIIRKADASVPIIFLTGEIGD 1185 ++ G + +VG +DI+E + E E S LI T + + LQG G A+T + + A+++ +S D+ CA+HQ VI DLLD+E RE+ D + I + A N LV ++P ++TD + KRI++N VSNAVKFTD G T+ I+ L M VSD G GIPD+F+ +FH G T+ ++Y++GSGLGL I L + LGG++SF DN P+GTV +P +P L S AS D T ++VA+DN +N KVL RML+ + +V DGA AV FE + P V ILDVHMP M G +AA+ IR+ +SVPIIFLTG+ D Sbjct: 126 KADGTRSMVGTVMDITELKNMQDREAEHVVLKKTLEAGILSNTQTLISMTANLGPDQLQG--GPADTP-------------HTNRADVV---RSTLDDLLECAHHQLMVINDLLDYEMVTTAAASKVARPREVVDIDAMAASVSRIFSSSARNKMVKLVHNVPHVHRMINTDEQAVKRILMNFVSNAVKFTDEGSVTVEIALDIDKCELKMVVSDTGRGIPDEFRDLLFHTMGLTTTNTDYVSGSGLGLAICKSLADGLGGSVSFHDNAPRGTVMICTLPLQPEDLCLSTSTASADVPEHPVSLAELRRNSLNVAGATGALGALRRSRVLVAEDNRINCKVLRRMLEGECADLKMVNDGAAAVDQFEHDGPFDVCILDVHMPKMGGKEAAARIRQLASSVPIIFLTGKCND 518
BLAST of jgi.p|Trimin1|161950 vs. uniprot
Match: A0A3R8TJR3_9GAMM (Histidine kinase n=4 Tax=Pseudoalteromonas TaxID=53246 RepID=A0A3R8TJR3_9GAMM) HSP 1 Score: 161 bits (408), Expect = 1.290e-39 Identity = 117/417 (28.06%), Postives = 197/417 (47.24%), Query Frame = 1 Query: 7 AGEGSFYSDWRVLQPDGSTIHLKCRAEVCTAESSGEKHLVGICLDISETVR---LSRDVVEAERHSESRLFQLIRTTCHEIRNPLQGMIGCAETQLLLLEKVMGSSKTNDDMANIMAELKSLASDIHACANHQACVITDLLDFER------EISDAPQPVCCATN--------ITHAHNTSLVLHIPKQL---WVSTDVRLTKRIMINLVSNAVKFTDNGTIHISA----QHKSDTLTMEVSDNGCGIPDDFKKNIFH--VTGCTSQSEYITGSGLGLCIVNQLTNSLGGTISFKDNKPKGTVFTLVVPCEPSLPGSPDMASKDSWTSDDPCFSELDIVVADDNIVNRKVLSRMLQTSFRQVIVVEDGALAVATFESNNPSFVILDVHMPIMDGLKAASIIRKADASVPIIFLTGEI 1179 AG G + ++RV+ P+G +K A++ + + +VG+ D++E ++ +S A HS + HEIR P+ ++G L LLE S + N + KSL + +I D+LD+ + E+ AP + + + V++I K W+ VR+ K+I++NL SNAVKFT G + I+A + + + + + D+G G+ + +K IF TS + G+GLG+ I L + GTI+ KGT + +P E S S +K P L+I++A+DN +N+ ++ ML+ + + VVE+G LAV N+ +++D+HMP+MDG+ A IRK D +P+I LT + Sbjct: 373 AGTGEYEPEFRVVHPNGDIRTIKASAQIIRDKDNKPTRVVGVNYDVTEKIKAIEVSETARLAAEHSSKAKSDFLANMSHEIRTPMNAILG----GLQLLENASLDSDLRKVLTNAIFSAKSLLT-----------IINDILDYSKIESNKIELESAPISIRNILDSVKYDLDALVSNKGVDFVVNIDKHFEDGWLGDLVRV-KQIILNLASNAVKFTHKGKVSITATNVIHNNNAAIHLSIQDSGIGMDEQTQKRIFERFSQADTSTTRQYGGTGLGMSITVNLIKLMNGTINLTSKAGKGTTVDVTLPLEQSNSQSQVTQTK---ALTPPNLQNLEILIAEDNPINQILVKTMLKETGAIITVVENGDLAVKACRENSFHLILMDIHMPVMDGVDAIKAIRKLDIKIPVIALTANV 770
BLAST of jgi.p|Trimin1|161950 vs. uniprot
Match: A0A0P7E0Q3_9GAMM (Histidine kinase n=1 Tax=Pseudoalteromonas lipolytica TaxID=570156 RepID=A0A0P7E0Q3_9GAMM) HSP 1 Score: 158 bits (400), Expect = 1.520e-38 Identity = 122/452 (26.99%), Postives = 219/452 (48.45%), Query Frame = 1 Query: 10 GEGSFYSDWRVLQPDGSTIHLKCRAEVCTAESSGEKHLVGICLDISETVRLSRDVVEAERHSESRL---FQLIRTTCHEIRNPLQGMIGCAETQLLLLEKVMGSSKTNDDMANIMAELKSLASDIHACANHQACVITDLLDFEREISDAPQPVCCATNITHA------------HNTSLVLHIPK-----QLWVSTDVRLTKRIMINLVSNAVKFTDNGTIHISAQHK----SDTLTMEVSDNGCGIPDDFKKNIFH--VTGCTSQSEYITGSGLGLCIVNQLTNSLGGTISFKDNKPKGTVFTLVVPCEPSLPGSPDMASKDSWTSD--DPCFSELDIVVADDNIVNRKVLSRMLQTSFRQVIVVEDGALAVATFESNNPSFVILDVHMPIMDGLKAASIIRKADASVPIIFLTGEI-GDSLVNVVHQLKPSQLLLKPVSKNKLLHELKQF 1278 GEG + ++RV+ P+G +K AEV ++G+ D++E V + + EA+ +E+ + + HEIR P+ ++G L LL+ A + ELK++ S+ A +I D+LD+ + S+ Q ++T N + + K W+ VR+ K+I++NL SNAVKFT+ G++ ++ + D + ++V D+G G+ ++ + IF TS + G+GLG+ I L +GG I + KGT ++++P + DM SK+ P S I+VA+DN +N+ ++ ML+++ +V +VE+G LA+ + + V++D+HMP MDG++A +++ +P+I LT + D + N + Q + + KP+ N+L LK F Sbjct: 375 GEGVYDPEFRVVHPNGDIKVIKASAEVIRDTDGKAVKVIGVNYDVTEKVNAIQVLYEAKLAAENAVKAKSDFLANMSHEIRTPMNAILG----GLQLLQD-----------AKLSRELKTVLSNASFSAQSLLTIINDILDYSKIESNNLQLEQIQFSLTEVLESVKYDLDGQVSNKQIQFIVNKGERYKDYWLGDLVRV-KQIILNLASNAVKFTEKGSVKVNIDSRPYSGKDAIYIQVIDSGIGMTEEAAQRIFERFAQADTSTTRKYGGTGLGMSITTNLIKMMGGEIDVQSQLDKGTTVSVILPLQ-----EVDMVSKEKAKKSLSAPDLSSKQILVAEDNAINQVLIQSMLKSTKAKVTIVENGQLAIDEVKKGSYDIVLMDIHMPEMDGVEAQKQLKQLFPKLPVIALTANVMKDDVENYIQQGFVAHIA-KPIDINQLYGSLKHF 804
BLAST of jgi.p|Trimin1|161950 vs. uniprot
Match: C3L4M4_AMOA5 (Non-specific serine/threonine protein kinase n=2 Tax=Candidatus Amoebophilus asiaticus TaxID=281120 RepID=C3L4M4_AMOA5) HSP 1 Score: 158 bits (400), Expect = 2.780e-38 Identity = 139/471 (29.51%), Postives = 221/471 (46.92%), Query Frame = 1 Query: 31 DWRVLQPDGSTIHLKCRAEVCTAESSGEK-HLVGICLDISETVRLSRDVVEA---------ERHSESRLF-----QLIRTTCHEIRNPLQGMIGCAETQLLLLEKVMGSSKTNDDM-ANIMAELKSLA-------SDIHACANHQACVITDLLDFER------EISDAP--------QPVCCATNITHAHNTSLVLHIPKQ-LWVSTDVRLTKRIMINLVSNAVKFTDNGTIHISAQHKS-DT----LTMEVSDNGCGIPDDFKKNIFHVTGCTSQSEYITGSGLGLCIVNQLTNSLGGTISFKDNKPKGTVFTLVVPCEPSLPGSPDMASKDSWTSDD-PCFSELDIVVADDNIVNRKVLSRMLQTSFRQVIVVEDGALA---------VATFESNNPS---FVILDVHMPIMDGLKAASIIRKADA-----SVPIIFLTGEIGDSLVNVVHQLKPSQLLLKPVSKNKLL 1260 D+RV+ PDGS + +V +SG + G+CLDI+E +L +D +EA +R E+ + + I T CHEIRNP+ G+ + T + L EK+ K + + + ELK L I C NHQ VI +L+ R ++ P + + T+ +L++ +PKQ + + D K I+INL+SNA+KFT+ G I IS Q ++ D+ L + V D G G+ + + +F S+Y GSGLGL I +L + +GGTI K +G+ FT+ + CE G + K P + I++ +DNIVN+K+L R L+ + +V ++G A V T E N + +++D+ MP+M G++A IRK + S+PII L+ + + KP K +LL Sbjct: 1797 DYRVIWPDGSQHMITAHGQVYRDTTSGSPIKMTGVCLDITERKKLEQDRLEALQQAKEKEQQRADEAERYFKQQEEFINTVCHEIRNPMNGI---SNTVVFLEEKITSLKKLKESLPGSFQPELKELLPTLEEDIQTIQHCVNHQLVVINGVLNLSRLEAGKEKLLLKPFKPKTIIEESILLFTSQLKTKQLNLIIDLPKQAIAIQGDPERFKMILINLISNAIKFTEKGHIKISFQTQAVDSTHVELVIRVEDTGIGMTPEEQSCLFQRFSRPLSSQY-EGSGLGLAISKKLLDLMGGTIQVDSVKGQGSTFTIHLTCEMVDIGEKLIYQKPPAPLPILPPIAVKHILIVEDNIVNQKILRRQLEAAGYTCMVADNGQKAIEAIGAIEEVETLEQWNLAAFDLILMDLEMPVMGGIEATGWIRKKEQQLGVPSIPIIGLSAYAEEIYGETAKKAGMDAYNTKPYRKEELL 2263
BLAST of jgi.p|Trimin1|161950 vs. uniprot
Match: A0A4Z0SYV8_9GAMM (Histidine kinase n=4 Tax=unclassified Pseudoalteromonas TaxID=194690 RepID=A0A4Z0SYV8_9GAMM) HSP 1 Score: 157 bits (396), Expect = 5.180e-38 Identity = 117/419 (27.92%), Postives = 205/419 (48.93%), Query Frame = 1 Query: 4 SAGEGSFYS-DWRVLQPDGSTIHLKCRAEVCTAESSGEKHLVGICLDISETVRL---SRDVVEAERHSESRLFQLIRTTCHEIRNPLQGMIGCAETQLLLLEKVMGSSKTNDDMANIMAELKSLASDIHACANHQACVITDLLDFER------EISDAPQPVCCATNITHAHNTSLV--------LHIPKQL---WVSTDVRLTKRIMINLVSNAVKFTDNGTIHISA---QHKSD-TLTMEVSDNGCGIPDDFKKNIFH--VTGCTSQSEYITGSGLGLCIVNQLTNSLGGTISFKDNKPKGTVFTLVVPCEPSLPGSPDMASKDSWTSDDPCFSELDIVVADDNIVNRKVLSRMLQTSFRQVIVVEDGALAVATFESNNPSFVILDVHMPIMDGLKAASIIRKADASVPIIFLTGEI 1179 S +G+ Y ++RV+ PDG LK A V + ++G+ D+++ ++ S + A ++ + HEIR P+ ++G QLL D A + +L+ + + + A +I D+LD+ + EI P + N +L+ + + K W+ VR+ K+I++NL SNAVKFT+ G + I+ +HKS T+ ++V D+G G+ ++ + IF TS + G+GLG+ I L +GG I+ K +GT+ + +P E + +P S T P S I++A+DN +N+ ++ MLQ + +++VE+G LAV F++ V++D+HMP+MDG++A I+ + S+PII LT + Sbjct: 374 SIEKGALYEPEFRVVHPDGKIRTLKASARVIRDKWGTPLKVIGVSYDVTDKIQAIETSENARVAAENASKIKSDFLANMSHEIRTPMNAILG--GLQLL-------------DNAELSTDLRKILVNATSSAKSLLTIINDILDYSKVESNKIEIEKMPLSIVDILNSVKYDLDALISNQQIDFKIDVSKNFHDNWLGDQVRV-KQIILNLASNAVKFTNQGCVKIAVDCIEHKSQQTILIKVEDSGIGMSEEAQGRIFERFSQADTSTTREYGGTGLGMSITISLVKLMGGEIAVNSIKGRGTIIDVTLPLEKTHV-APKKVKAQSCTP--PALSGKRILIAEDNKINQMLIKTMLQETESSLVIVENGMLAVDAFKNQPFDLVLMDIHMPVMDGVEALKSIKTLNNSIPIIALTANV 773
BLAST of jgi.p|Trimin1|161950 vs. uniprot
Match: V4HIG7_9GAMM (Histidine kinase n=3 Tax=Pseudoalteromonas TaxID=53246 RepID=V4HIG7_9GAMM) HSP 1 Score: 154 bits (390), Expect = 7.540e-38 Identity = 122/396 (30.81%), Postives = 202/396 (51.01%), Query Frame = 1 Query: 175 VEAERHSESRLFQLIRTTCHEIRNPLQGMIGCAETQLLLLEKVMGSSKTNDDMANIMAELKSLASDIHACANHQACVITDLLDFER-------------EISDAPQPVCCATNITHAHNTSLVLHIPKQLWVSTDVRL-----TKRIMINLVSNAVKFTDNGTIHI---SAQHKSDT-LTMEVSDNGCGIPDDFKKNIFH--VTGCTSQSEYITGSGLGLCIVNQLTNSLGGTISFKDNKPKGTVFTLVVPCEPSLPGSPDMASKDSWTSDDPCFSELDIVVADDNIVNRKVLSRMLQTSFRQVIVVEDGALAVATFESNNPSFVILDVHMPIMDGLKAASIIRKADASVPIIFLTGEIGDSLVNVVHQLKPSQLLLKPVSKNKLLHELKQFRLQN 1290 ++AE+ S+++ + + HEIR P+ G++G L + EK N+ E KSL S A VI D+LDF + +SD + V + A S+ LH L S+D RL ++I++NLVSNAVKFTD+G I I + Q++ ++ L + V D G G+ + +++IF +S + G+GLGL I L +GGTI+ K + KGT +++P + PD K+ P F+ L I++A+DN +N+ V+S+ML+ + + VVE+G LAV F ++ V++D+ MP MDG++A +I+K + ++P+I LT + + L + + KPV+ + + + Q QN Sbjct: 197 IKAEQASKAK-SEFLANMSHEIRTPMNGILGA----LQIFEK-----------GNLDEESKSLMSKAVYSAQSLLTVINDILDFSKIEAHKLTLEVAPFSMSDTVESVVSDLKV-EADKKSISLHASYDLG-SSDGRLGDSVRVRQILLNLVSNAVKFTDSGGIKIELHAIQYQGESALHIAVIDTGIGMDKNAQQSIFDRFQQADSSTTRKYGGTGLGLAITASLVRLMGGTINLKSEQGKGTTIDVILPLAQAELSDPD---KEGGEDQLPNFAALKILIAEDNEINQIVISKMLEKTGATMDVVENGKLAVEAFNQSSYDIVLMDIQMPEMDGIEAFMLIQKVNPNIPVIALTANVMSQDIAHYKSLGFAAHIGKPVAMHAMYRTINQSVKQN 571
BLAST of jgi.p|Trimin1|161950 vs. uniprot
Match: A0A166YYS6_9GAMM (Histidine kinase n=2 Tax=Pseudoalteromonas luteoviolacea TaxID=43657 RepID=A0A166YYS6_9GAMM) HSP 1 Score: 154 bits (389), Expect = 5.560e-37 Identity = 123/438 (28.08%), Postives = 215/438 (49.09%), Query Frame = 1 Query: 10 GEGSFYSDWRVLQPDGSTIHLKCRAEVCTAESSGEKHLVGICLDISETVRLSRDVVEAERHSESR---LFQLIRTTCHEIRNPLQGMIGCAETQLLLLEKVMGSSKTNDDMANIMAE-LKSLASDIHACANHQACVIT---DLLDFEREISDAPQPV-CCATNITHAHNTSLVLHIPKQL---WVSTDVRLTKRIMINLVSNAVKFTDNGTIHISAQ----HKSDTLTMEVSDNGCGIPDDFKKNIFH--VTGCTSQSEYITGSGLGLCIVNQLTNSLGGTISFKDNKPKGTVFTLVVPCEPSLPGSPDMASKDSWTSDDPCFSELDIVVADDNIVNRKVLSRMLQTSFRQVIVVEDGALAVATFESNNPSFVILDVHMPIMDGLKAASIIRKADASVPIIFLTGEIGDSLVNVVHQLKPSQLLLKPVSKNKLLHELK 1272 G + +++R+++PDG +K AEV T E +VG+ D++E + + A++ +E + HEIR P+ ++GC QL K+ T D A+ A+ L ++ +DI + ++ +T FE+ + + A+N + +I + W+ VR+ K++++NLVSNAVKFT G + +S + + + + V D+G G+ +D +K IF +S S G+GLG+ I L +GG IS K KGT ++++P E S + + +S+ + P S + I+VA+DN +N+ ++ ML+ V +VE+G AV ++ V++D+HMP MDG++A +I+ D S+P++ LT + V Q + KP+ N L LK Sbjct: 505 GTAIYDTEFRIVRPDGVIRTMKASAEVITDEQGNALKVVGVNYDLTEKIEALETLAVAKQEAEKANRAKSDFLANMSHEIRTPMNAILGCL--QLFKNAKLDNELSTILDNASFSAQSLLTIINDILDYSKIESNKLTLEQAPFSFEQILDSVKYDLDALASN----KGIDFLFYIDDKFHDGWLGDLVRV-KQVLLNLVSNAVKFTHKGAVSVSVSSTKLNSKEAIRVVVIDSGIGMSEDAQKRIFDRFSQADSSTSRQYGGTGLGMSITVSLVKLMGGEISLKSEVNKGTEVSVILPLERS---NVEHSSQKQESVMPPDLSGMKILVAEDNKINQVLIRTMLKPCHAAVTLVENGLQAVNLVKNTAFDLVLMDIHMPEMDGVEAQRLIKSLDQSLPVVALTANVMSKDVQSYLQQGFVSHVGKPIDINNLYGVLK 932
BLAST of jgi.p|Trimin1|161950 vs. uniprot
Match: UPI001AF81DED (ATP-binding protein n=1 Tax=Luteitalea sp. TBR-22 TaxID=2802971 RepID=UPI001AF81DED) HSP 1 Score: 152 bits (385), Expect = 1.940e-36 Identity = 124/408 (30.39%), Postives = 203/408 (49.75%), Query Frame = 1 Query: 4 SAGEGSFYSDWRVLQPDGSTIHLKCRAEVCTAESSGEKHLVGICLDISETVRLSRDVVEAERHSESRLF---QLIRTTCHEIRNPLQGMIGCAETQLLLLEKVMGSSKTNDDMANIMAE-LKSLASDIHACANHQAC-VITDLLDFE--REISDAP---QPVCCATNITHAHNTSLVLHIPKQLWVSTDVRLTKRIMINLVSNAVKFTDNGTIHISAQHKSDT----LTMEVSDNGCGIPDDFKKNIFH--VTGCTSQSEYITGSGLGLCIVNQLTNSLGGTISFKDNKPKGTVFTLVVPCEPSLPGSPDMASKDSWTSDDPCFSELDIVVADDNIVNRKVLSRMLQTSFRQVIVVEDGALAVATFESNNPSFVILDVHMPIMDGLKAASIIRKA---DASVPIIFLT 1170 S E + +R+++PDG HL+ +V ES G + L+G+ LD++ V L ++ + +ES Q + T HEIR P+ G++G E LLL + MA++ A L + +DI + +A V+ + + FE R + D P ++T A L W+ D +++++NLV NA+KFT G + + + ++DT L +EV D+G GI + + +F V S + G+GLGL I QL +GG I + +G++F VP + + + + + T+ L I+VA+DN+VN++++ L +V++V DGA AVA + V++DV MP MDGL+A + IR D +VPII LT Sbjct: 553 SDSERLLEAQYRIVRPDGCVRHLRANGQVF--ESDGRRVLLGVNLDVTGDVELQHELNDQRLKAESATAAKAQFLATMSHEIRTPMNGVLGMLE--LLLRSDLTPEQHETATMAHVSASALLHILNDILDLSKLEAQQVVLETIAFEPSRLVGDTLALLSPRALEKHLTLASEVDPAL----PAWLEADPTRIRQVLLNLVGNAIKFTARGDVRVRLR-RADTHDTLLRVEVQDSGEGISPEVQARLFQRFVQADASTTRRHGGTGLGLAICRQLVELMGGEIGVESVPGEGSLFWFTVPVRVTQAPARRLDVQHA-TAPVALQLPLRILVAEDNLVNQRLVRAFLAPGRHEVVMVGDGAAAVAALDEGTYDVVLMDVQMPGMDGLQATAAIRARTTPDHAVPIIALT 950
BLAST of jgi.p|Trimin1|161950 vs. uniprot
Match: UPI00191E5F39 (PAS domain-containing hybrid sensor histidine kinase/response regulator n=1 Tax=Marivirga atlantica TaxID=1548457 RepID=UPI00191E5F39) HSP 1 Score: 149 bits (377), Expect = 3.320e-36 Identity = 114/387 (29.46%), Postives = 189/387 (48.84%), Query Frame = 1 Query: 139 DISETVRLSRDVVEAERHSESRLFQLIRTTCHEIRNPLQGMIGCAETQLLLLEKVMGSSKTNDDMANIMAE---LKSLASDI---HACANHQACVITDLLDFEREISDAPQPVCCATNITHAHNTSLVLHIPKQLWVSTDVRLTKRIMINLVSNAVKFTDNGTIHISAQHKSDTLTMEVSDNGCGIPDDFKKNIFHVTGCTSQS--EYITGSGLGLCIVNQLTNSLGGTISFKDNKPKGTVFTLVVPCEPSLPGSPDMASKDSWTSDDPCFSELDIVVADDNIVNRKVLSRMLQTSFRQVIVVEDGALAVATFESNNP-SFVILDVHMPIMDGLKAASIIRKADASVPIIFLTGEIGDSLVNVVHQLKPSQLLLKPVSKNKLLHELK 1272 D+++ ++ + E+ + L + HEIR PL ++G + LL K + S +D + NI L L SDI ++Q +I + + I D Q + + A S+ ++ + TD +I+INL++NA+KFT G I I+ + K DTL V D G GIP D ++NIF T QS GSGLGL IV L + G I + KG+ F +P P+ + ++ASK + ++V +DN VNR +L L+ ++I +G A+ +S+N V++D++MPIMDG +A +I++ ++ + +I TG ++ + + + + L+KPV + KLL LK Sbjct: 170 DVTDLIKAQKKAQESNELKSAFLSNM----SHEIRTPLNAILGFSS---LLRNKNLSESSQDDYLRNIKQSGERLLRLISDIIDTSKIESNQISIIKENCNLNILIDDVIQQCSLSQRNSKAEIKSIKGLADEESHIITDCHRLTQILINLLTNALKFTKEGAITIAYEQKEDTLQFYVRDTGIGIPADQQENIFKRFSQTDQSGRNVKEGSGLGLSIVKGLLKLMEGEIWVESELGKGSCFYFSIPHNPTDTPTKNIASKTPLNKKFKALQDAVVLVVEDNEVNRFLLEAYLKDHIGKIIEAYNGQEAIELVKSHNDIDVVLMDINMPIMDGYEAVKLIKEYNSDITVIAQTGHAMEAEIQELKKSEFDDYLIKPVDEFKLLEMLK 549 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|161950 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_1527 ID=mRNA_1527|Name=jgi.p|Trimin1|161950|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1296bp|location=Sequence derived from alignment at Contig_18:1331164..1332501+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGTCAGCAGGCGAGGGGTCGTTCTATAGTGATTGGAGAGTATTGCAGCCback to top protein sequence of jgi.p|Trimin1|161950 >Trimin1|161950|e_gw1.18.249.1 ID=Trimin1|161950|e_gw1.18.249.1|Name=jgi.p|Trimin1|161950|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=432bp MSAGEGSFYSDWRVLQPDGSTIHLKCRAEVCTAESSGEKHLVGICLDISEback to top mRNA from alignment at Contig_18:1331164..1332501+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_1527 ID=mRNA_1527|Name=jgi.p|Trimin1|161950|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1338bp|location=Sequence derived from alignment at Contig_18:1331164..1332501+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_18:1331164..1332501+ >mRNA_1527 ID=mRNA_1527|Name=jgi.p|Trimin1|161950|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1296bp|location=Sequence derived from alignment at Contig_18:1331164..1332501+ (Tribonema minus UTEX_B_3156 )back to top |