mRNA_15240 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|178460
Unique NamemRNA_15240
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|178460 vs. uniprot
Match: A0A836CJR5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJR5_9STRA)

HSP 1 Score: 668 bits (1723), Expect = 3.840e-235
Identity = 559/559 (100.00%), Postives = 559/559 (100.00%), Query Frame = 1
Query:    1 METAVQHVVADLPLLQWAVSPSGGGDTMSKVTCAEAARGGQLDSLQWLREAGCGWDRRXXXXXXXXXXXXXXXXXXXXXAPICKNTAIKDAAGREHLRAVQWLHVRGSFYEFALHESVSAAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHARRSPWDETTCAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADGILPPLPKAGGRGIIWGHVPTLAVEGGNVAALKYVLENGCAWGYGKYGIESACLRAAEKGDIEMLDYLLAQGARCDDVQPLLDIAALSGDVGLLQWSHSVGADLDLQTLVRSAVSHGHFEVLAWMHTEGLLLRAHDGLRQHATLSXXXXXXXXXXXXXXXXXLLTDEDVCVTAXXXXXXXXXXXXXXXXXXXXXXXXXTLFTNGGAGYAYDNVPQRFKEVIYLAQTRGCTCPIHEHCPIPREDLEVSEPGVIWEYDSDTVHDPEFFPWYRRYVTEDAP 1677
            METAVQHVVADLPLLQWAVSPSGGGDTMSKVTCAEAARGGQLDSLQWLREAGCGWDRRXXXXXXXXXXXXXXXXXXXXXAPICKNTAIKDAAGREHLRAVQWLHVRGSFYEFALHESVSAAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHARRSPWDETTCAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADGILPPLPKAGGRGIIWGHVPTLAVEGGNVAALKYVLENGCAWGYGKYGIESACLRAAEKGDIEMLDYLLAQGARCDDVQPLLDIAALSGDVGLLQWSHSVGADLDLQTLVRSAVSHGHFEVLAWMHTEGLLLRAHDGLRQHATLSXXXXXXXXXXXXXXXXXLLTDEDVCVTAXXXXXXXXXXXXXXXXXXXXXXXXXTLFTNGGAGYAYDNVPQRFKEVIYLAQTRGCTCPIHEHCPIPREDLEVSEPGVIWEYDSDTVHDPEFFPWYRRYVTEDAP
Sbjct:    1 METAVQHVVADLPLLQWAVSPSGGGDTMSKVTCAEAARGGQLDSLQWLREAGCGWDRRXXXXXXXXXXXXXXXXXXXXXAPICKNTAIKDAAGREHLRAVQWLHVRGSFYEFALHESVSAAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHARRSPWDETTCAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADGILPPLPKAGGRGIIWGHVPTLAVEGGNVAALKYVLENGCAWGYGKYGIESACLRAAEKGDIEMLDYLLAQGARCDDVQPLLDIAALSGDVGLLQWSHSVGADLDLQTLVRSAVSHGHFEVLAWMHTEGLLLRAHDGLRQHATLSXXXXXXXXXXXXXXXXXLLTDEDVCVTAXXXXXXXXXXXXXXXXXXXXXXXXXTLFTNGGAGYAYDNVPQRFKEVIYLAQTRGCTCPIHEHCPIPREDLEVSEPGVIWEYDSDTVHDPEFFPWYRRYVTEDAP 559          
BLAST of jgi.p|Trimin1|178460 vs. uniprot
Match: A0A836CII6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CII6_9STRA)

HSP 1 Score: 112 bits (280), Expect = 5.380e-23
Identity = 72/179 (40.22%), Postives = 92/179 (51.40%), Query Frame = 1
Query:  868 AGGRGIIWG--------------HVPTLAVEGGNVAALKYVLENGCAWGYGKYGIESACLRAAEKGDIEMLDYLLAQGARCD----------------------------DVQPLLDIAALSGDVGLLQWSH-SVG-ADLDLQTLVRSAVSHGHFEVLAWMHTEGLLLRAHDGLRQHAT 1272
            AG RG  WG              ++P +A +G ++  LKYV+ENGC W       +  C  AA +GD++MLD+ +A GA CD                            DV+PLL  AAL+G V LLQW   S+G +  D+  LVR+A   G  EVLAWMH  GLL+RAHD LRQ AT
Sbjct:  204 AGERGFPWGSHKAAACVELIHRDYMPVVAAKGDSIEVLKYVIENGCEWD------QRVCSEAAGRGDVQMLDWAVANGAPCDYAEVTKRAWRAGRTAQLEVTKWLHTRGEDVKPLLVDAALAGHVPLLQWGRRSLGFSTTDVPALVRAAAKGGSVEVLAWMHAAGLLMRAHDDLRQLAT 376          
BLAST of jgi.p|Trimin1|178460 vs. uniprot
Match: A0A835ZGN6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGN6_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 1.100e-8
Identity = 33/58 (56.90%), Postives = 36/58 (62.07%), Query Frame = 1
Query:    1 METAVQHVVADLPLLQWAVSPSGGGDTMSKVTCAEAARGGQLDSLQWLREAGCGWDRR 174
            M TAV+HVV +  L QWAV   GGG   S   CA AAR GQL  LQWLR+  C WD R
Sbjct:   72 MMTAVEHVVDNFSLFQWAVDAGGGGCPKSADLCASAARSGQLPLLQWLRDGDCEWDNR 129          
BLAST of jgi.p|Trimin1|178460 vs. uniprot
Match: A0A836CK28_9STRA (Pept_C1 domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK28_9STRA)

HSP 1 Score: 682 bits (1760), Expect = 1.900e-248
Identity = 326/326 (100.00%), Postives = 326/326 (100.00%), Query Frame = 1
Query:    1 RMAFDSYRTQHARAYASDGEAERRFAAFKLNLALIDALNDANPLALFEGISSKVKGPNISKSQFGWITEEDCAACGMYPELGNYTLANMPTEFDWRAKYETPVSSQGYCGSCWSFSTAGDIEGKWFLATGQVVELSKQQLVACDQKRNAAEGCNGGLPYAAMQYVASTGGLVYEEDYPYKNVCAWGTCGSAPKGTPTCDTDQVRGSLKDSAVAHIGGWQMVALGAQYEDLLATAMVKNGPISIVLNAVGMEYYKAGAIDTTLPCEPTTLDHAVLVVGFGEQDGVEYWVVKNSWGSWWGEGGYYRVVKGQNHCGLANFAVTSVIKDP 978
            RMAFDSYRTQHARAYASDGEAERRFAAFKLNLALIDALNDANPLALFEGISSKVKGPNISKSQFGWITEEDCAACGMYPELGNYTLANMPTEFDWRAKYETPVSSQGYCGSCWSFSTAGDIEGKWFLATGQVVELSKQQLVACDQKRNAAEGCNGGLPYAAMQYVASTGGLVYEEDYPYKNVCAWGTCGSAPKGTPTCDTDQVRGSLKDSAVAHIGGWQMVALGAQYEDLLATAMVKNGPISIVLNAVGMEYYKAGAIDTTLPCEPTTLDHAVLVVGFGEQDGVEYWVVKNSWGSWWGEGGYYRVVKGQNHCGLANFAVTSVIKDP
Sbjct:    1 RMAFDSYRTQHARAYASDGEAERRFAAFKLNLALIDALNDANPLALFEGISSKVKGPNISKSQFGWITEEDCAACGMYPELGNYTLANMPTEFDWRAKYETPVSSQGYCGSCWSFSTAGDIEGKWFLATGQVVELSKQQLVACDQKRNAAEGCNGGLPYAAMQYVASTGGLVYEEDYPYKNVCAWGTCGSAPKGTPTCDTDQVRGSLKDSAVAHIGGWQMVALGAQYEDLLATAMVKNGPISIVLNAVGMEYYKAGAIDTTLPCEPTTLDHAVLVVGFGEQDGVEYWVVKNSWGSWWGEGGYYRVVKGQNHCGLANFAVTSVIKDP 326          
BLAST of jgi.p|Trimin1|178460 vs. uniprot
Match: A0A7S2BCN1_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BCN1_9STRA)

HSP 1 Score: 361 bits (926), Expect = 3.170e-119
Identity = 166/288 (57.64%), Postives = 205/288 (71.18%), Query Frame = 1
Query:  157 KVKGPNISKSQFGWITEEDCAACGMYPELGNYTLANMPTEFDWRAKYE--TPVSSQGYCGSCWSFSTAGDIEGKWFLATGQVVELSKQQLVACDQKRNAAEGCNGGLPYAAMQYVASTGGLVYEEDYPYKNVCAWGTCGSAPKGTPTCDTDQVRGSLKDSAVAHIGGWQMVALGAQYEDLLATAMVKNGPISIVLNAVGMEYY------------KAGAIDTTLPCEPTTLDHAVLVVGFGEQDGVEYWVVKNSWGSWWGEGGYYRVVKGQNHCGLANFAVTSVIKDP 978
            K  G   S  + GW++ +DCAAC +YP   NYT+ N+P  FDWRA  +  T V +Q YCGSCWSFSTA DIEGK + ATG+ V LS+QQLVACD K     GC+GG PY AMQY++  GG+++E  YPYK +CAWG CG+   GTPTCD+D +  ++K   V+ IGGWQMVA+G  YEDL+  A+VKNGPISI LNA GM+YY             AGAID   PCEPT LDHAVL+VG+G +D + YW++KNSWG  WGE GYYR+V+G NHCG+ANFA+TSVIK P
Sbjct:  202 KFDGSKFSSDEVGWVSVQDCAACALYPHFSNYTMGNLPDSFDWRAIGDVVTDVKNQKYCGSCWSFSTAQDIEGKHYFATGERVRLSEQQLVACDTKD---WGCDGGYPYRAMQYISQVGGMLHEASYPYKGICAWGACGNEEAGTPTCDSDTLNTNIKSGNVSAIGGWQMVAMGEDYEDLMRVALVKNGPISISLNANGMDYYVHGVVGCSNDDCNAGAIDVHTPCEPTALDHAVLLVGYGTEDDIPYWLIKNSWGDLWGEDGYYRLVRGSNHCGVANFAITSVIKAP 486          
BLAST of jgi.p|Trimin1|178460 vs. uniprot
Match: F0Y246_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y246_AURAN)

HSP 1 Score: 326 bits (835), Expect = 1.220e-107
Identity = 167/328 (50.91%), Postives = 217/328 (66.16%), Query Frame = 1
Query:    1 RMAFDSYRTQHARAYASDGEAERRFAAFKLNLALIDALNDANPLALFEGISSKVKGPNISKSQFGWITEEDCAACGMYPELGNYTLANMPTEFDWRAKYE-TPVSSQGYCGSCWSFSTAGDIEGKWFLATGQVVELSKQQLVACDQKRNAAEGCNGGLPYAAMQYVASTGGLVYEEDYPYKNVCAWGTCGSAP--KGTPTCDTDQVRGSLKDSAVAHIGGWQMVALGAQYEDLLATAMVKNGPISIVLNAVGMEYYKAGAIDTTLPCEPTTLDHAVLVVGFG-EQDGVEYWVVKNSWGSWWGEGGYYRVVKGQNHCGLANFAVTSVIK 972
            R  ++ ++ +  R +  D E  RRFA F+ NLA ID LN ANP A+F GI+S     +  +    W++  DCAAC  +P  G+Y + N+P +FDWRA    T V +Q YCGSCWSFS+AGDIEG  FLA   ++ LS QQLV+C+       GC+GG P+AAM+YV+  GGLV  +DYPYK +C    CG      GTPTCD + + G L    VA I G+Q VA+GA+YEDL+  A+VKNGP+S+  NA GME+Y AG +D   PC+PT LDHAVL+VG+G E   V YW++KNSW + WGEGGYYR+V+G N CG+AN  V SV K
Sbjct:    7 RDLYEQFKRRERRDF-DDAEDARRFAIFRRNLATIDTLNAANPAAVF-GITSFCDRTDEERQSVAWVSASDCAACDRFPHFGDYDMGNLPDDFDWRALGAVTAVKNQKYCGSCWSFSSAGDIEGTMFLAGDDLISLSTQQLVSCNTYNY---GCDGGWPFAAMEYVSHFGGLVPMDDYPYKGICMDNMCGGTEIFTGTPTCDKELLNGHLAAGDVAAIEGYQFVAMGAEYEDLMHVALVKNGPLSLAFNANGMEFY-AGGVDHHFPCDPTALDHAVLLVGYGTETFDVPYWLIKNSWDTEWGEGGYYRLVRGVNACGVANMVVHSVHK 328          
BLAST of jgi.p|Trimin1|178460 vs. uniprot
Match: A0A7S2W4U9_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W4U9_9STRA)

HSP 1 Score: 320 bits (820), Expect = 5.200e-103
Identity = 158/294 (53.74%), Postives = 198/294 (67.35%), Query Frame = 1
Query:  133 ALFEGISSKVKGPNISKSQFGWITEEDCAACGMYPELGNYTLANMPTEFDWRAKYE-TPVSSQGYCGSCWSFSTAGDIEGKWFLATGQVVELSKQQLVACDQKRNAAEGCNGGLPYAAMQYVASTGGLVYEEDYPYKNVCAWGTCGSAPKGTPTCDTDQVRGSLKDSAVAHIGGWQMVALGAQYEDLLATAMVKNGPISIVLNAVGMEYY-------------KAGAIDTTLPCEPTTLDHAVLVVGFGEQDGVEYWVVKNSWGSWWGEGGYYRVVKGQNHCGLANFAVTSVIK 972
            A+F+ +SSK    N+S     W++  DCAAC  +     YT  N+P  FDWR     T V +Q YCGSCW+FSTA D+EG  FLATG++  LS+QQLVAC+    A  GC+GG PY AMQY+   GGLV ++ Y YK +CAWG CG+   GTPTC T+ +   L+   VA IGG+Q+V+LGA+YE LL  A+VKNGPISI  NA GM+YY              AGAID   PC+P+ LDHAVL+VG+G + GV YWV+KNSWG  WGE GYYR+V+G NHCG+ANFAV SV+K
Sbjct:  214 AVFDALSSK----NMSFGMVPWVSASDCAACKRFEHFSLYTWDNLPENFDWRELGAVTDVKNQKYCGSCWTFSTAADLEGTHFLATGELESLSEQQLVACN---TADWGCDGGYPYRAMQYIHKFGGLVTDDAYGYKGICAWGDCGTPVAGTPTCHTEILNAELESKRVASIGGYQLVSLGAEYEALLRLALVKNGPISIAFNANGMDYYLHGVVGCSAENYCDAGAIDHHTPCDPSYLDHAVLIVGYGVEAGVPYWVIKNSWGDAWGEDGYYRIVRGSNHCGVANFAVHSVVK 500          
BLAST of jgi.p|Trimin1|178460 vs. uniprot
Match: A0A7S2BRB8_9STRA (Hypothetical protein n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BRB8_9STRA)

HSP 1 Score: 285 bits (728), Expect = 1.770e-91
Identity = 146/287 (50.87%), Postives = 179/287 (62.37%), Query Frame = 1
Query:  175 ISKSQFGWITEEDCAACGMYPELGNYTLANMPTEFDWR-AKYETPVSSQGYCGSCWSFSTAGDIEGKWFLATGQVVELSKQQLVACDQKRNAAEGCNGGLPYAAMQYVASTGGLVYEEDYPYKNVCAWGTCGSAPKGTPTCDTDQVRGSLKD---SAVAHIGGWQMVALGAQYEDLLATAMVKNGPISIVLNAVGMEYYK----------------AGAIDTTLPCEPTTLDHAVLVVGFGEQDGVEYWVVKNSWGSWWGEGGYYRVVKGQNHCGLANFAVTSVIKD 975
            IS  Q  W   + CAAC  YP    YT  N P  FDWR     T V +Q YCGSCW+FSTA D+EG  FLAT +++ LS+QQ+VACD   ++ +GC GG  YAAMQYV  TGGLV  +D PYK V           GTPTCDT+ +   LK    S   H  G+Q VA+G  YED +AT ++KNGP+S+ +NA GMEYY+                AG+I TT PC+PT+LDH VL V +G QDG +YWV+KNSWGS WGE GYYR  +G NHCG+AN  V SV K+
Sbjct:   12 ISVGQVEWADIDMCAACERYPGFKKYTSENRPDNFDWRDLGAVTEVKNQKYCGSCWTFSTAADVEGTHFLATDELISLSEQQIVACD---SSMDGCEGGYMYAAMQYVEKTGGLVSYDDMPYKGVFM-----DYMLGTPTCDTEAINSVLKSDDLSKFGHSEGFQFVAMGPDYEDRMATILLKNGPLSVGINANGMEYYEFGITGCETIAGSTYCEAGSISTTTPCDPTSLDHGVLAVAYGVQDGTDYWVIKNSWGSEWGEDGYYRQTRGDNHCGVANMVVHSVYKN 290          
BLAST of jgi.p|Trimin1|178460 vs. uniprot
Match: A0A7S2DDK6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DDK6_9STRA)

HSP 1 Score: 283 bits (723), Expect = 6.860e-91
Identity = 141/278 (50.72%), Postives = 179/278 (64.39%), Query Frame = 1
Query:  139 FEGISS--KVKGPNISKSQFGWITEEDCAACGMYPELGNYTLANMPTEFDWRAKYETP-VSSQGYCGSCWSFSTAGDIEGKWFLATGQVVELSKQQLVACDQKRNAAEGCNGGLPYAAMQYVASTGGLVYEEDYPYKNVCAWGTCG-SAPKGTPTCDTDQVRGSLKDSAVAHIGGWQMVALGAQYEDLLATAMVKNGPISIVLNAVGMEYY------------KAGAIDTTLPCEPTTLDHAVLVVGFGEQDG----VEYWVVKNSWGSWWGEGGYYR 912
            + G+ S  K  G  + KSQ GWI   DCAAC +YP   +Y ++NMPT FDWRA      + +Q YCGSCW+FST  D+EGK FLATG++   S+QQL+ACDQ R    GC+GG   AAMQY+   GGLV EE YPYK +CAW  C  +    TPTC+T  +   LK  +VAHIG WQMVA+G+ +E+ +  +M+KNGPISI +NA  M++Y            +AG ID    C+PT LDHAVL VG+G  DG    V YW++KNSWG  WGE GY+R
Sbjct:   39 YTGLDSDDKYTGRQMEKSQVGWIDPADCAACNLYPNFSHYDMSNMPTGFDWRAYGAVSHIRNQKYCGSCWTFSTVADVEGKHFLATGELKNFSEQQLIACDQGR-INWGCDGGYQQAAMQYLVDVGGLVEEEVYPYKGICAWDACDQNISYSTPTCNTTLLNQELKSMSVAHIGSWQMVAMGSDWEEPMVLSMLKNGPISISINAHAMDFYIHGIVGCNHKYCEAGKIDHKKNCDPTELDHAVLAVGYGTSDGTSDGVPYWIIKNSWGKDWGEDGYWR 315          
BLAST of jgi.p|Trimin1|178460 vs. uniprot
Match: F0Y300_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y300_AURAN)

HSP 1 Score: 285 bits (730), Expect = 1.350e-90
Identity = 154/341 (45.16%), Postives = 201/341 (58.94%), Query Frame = 1
Query:   10 FDSYRTQHARAYASDGEAERRFAAFKLNLALIDALNDANPLALF-----------EGISSKVKGPNISK-SQFGWITEEDCAACGMYPELGNYTLANMPTEFDWRAKYE-TPVSSQGYCGSCWSFSTAGDIEGKWFLATGQVVELSKQQLVACDQKRNAAEGCNGGLPYAAMQYVASTGGLVYEEDYPYKNVCAWGTCGSAPKGTPTCDTDQVRGSLKDSAVAHIGGWQMVALGAQYEDLLATAMVKNGPISIVLNAVGMEYYKAGAIDT--TLPCEPTTLDHAVLVVGFGEQ--DG---VEYWVVKNSWGSWWGEGGYYRVVKGQNHCGLANFAVTSVIK 972
            FD +  +++++Y +  E   RF  F  NL  IDALN  NP ALF           E    ++  P+I+  ++ GW +  DCAAC +YP  G Y + N+P +FDWR     T V +Q YCGSCWSFSTA D+EG  +LATG +   + QQLV C+       GC+GG P+AAMQY++  GG+V  E  PYK +                  + +   L+D  VAHI GWQMVA+GA YE L+   +VKNGP+SI  NA GM+YY  G         C+PT+LDHAVLVVG+G Q  DG   V YWV+KNSW   WGE GYYR+V+G N CG+AN  V S++K
Sbjct:   89 FDQFIDEYSKSYDTTHEYNDRFTIFSKNLNYIDALNTQNPHALFGLNVFADQTEEERSKRRMTDPSITNYTRVGWASGSDCAACNLYPAFGEYDMGNLPDDFDWRELGAVTRVKNQAYCGSCWSFSTAADLEGTHYLATGDLESYAPQQLVECNTMNL---GCDGGYPFAAMQYLSHFGGMVTWETMPYKKI------------------ELLNEKLEDGDVAHISGWQMVAMGADYESLMRVTLVKNGPLSIAFNANGMDYYVHGVDGDGDMFTCDPTSLDHAVLVVGYGVQHTDGNGKVPYWVIKNSWDDVWGEDGYYRLVRGSNACGVANMVVHSIVK 408          
BLAST of jgi.p|Trimin1|178460 vs. uniprot
Match: A0A7S3K4M5_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K4M5_9STRA)

HSP 1 Score: 282 bits (721), Expect = 4.210e-88
Identity = 140/294 (47.62%), Postives = 182/294 (61.90%), Query Frame = 1
Query:  178 SKSQFGWITEEDCAACGMYPELGNYTLANMPTEFDWRAKYE-TPVSSQGYCGSCWSFSTAGDIEGKWFLATGQVVELSKQQLVACDQKRNAAEGCNGGLPYAAMQYVASTGGLVYEEDYPYKNVCAWGTCGSAPKGTPTCDTDQVRGSLKDSAVAHIGGWQMVALGAQYEDLLATAMVKNGPISIVLNAVGMEYY--------------KAGAID--------TTLPCEPTTLDHAVLVVGFGEQD----GVEYWVVKNSWGSWWGEGGYYRVVKGQNHCGLANFAVTSVIKDP 978
            ++ +F W +  DCAAC  +   GNY   NMP  FDWR     T V +Q YCGSCWSFSTA D+EG W+LAT +++  S QQLV C+       GC+GG P+AAMQY++  GG++  +D PY  V   G   + P GTPTC+T  +   +K   VAHIGGWQMVALG +YEDL+   ++KNGP+SI  NA GM+YY              +AG++             C+PT+LDHAVL VG+G Q      + YW++KNSWG  WGE GYYR+V+G N CG+AN  V SV+KDP
Sbjct:  217 AQGEFAWASASDCAACRKFTAFGNYNFGNMPDNFDWRTLGAVTSVKNQAYCGSCWSFSTAADVEGTWYLATDELISRSPQQLVECNTMNL---GCDGGYPFAAMQYLSHIGGMLSWDDLPYDKVFE-GDALANPVGTPTCNTHLINEKMKTHQVAHIGGWQMVALGDEYEDLMRVVLLKNGPLSIAFNANGMDYYIHGVAGGCSSAEDCEAGSVSHPDIDGEGDMFTCDPTSLDHAVLAVGYGVQTTDNGDIPYWLIKNSWGDAWGEDGYYRLVRGTNACGVANMVVHSVVKDP 506          
BLAST of jgi.p|Trimin1|178460 vs. uniprot
Match: A0A7S2GII5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GII5_9STRA)

HSP 1 Score: 275 bits (703), Expect = 2.110e-87
Identity = 140/290 (48.28%), Postives = 180/290 (62.07%), Query Frame = 1
Query:  160 VKGPNISKSQFGWITEEDCAACGMYPELGNYTLANMPTEFDWR-AKYETPVSSQGYCGSCWSFSTAGDIEGKWFLATGQVVELSKQQLVACDQKRNAAEGCNGGLPYAAMQYVASTGGLVYEEDYPYKNVCAWGTCGSAPKGTPTCDTDQVRGSLKD--SAVAHIGGWQMVALGAQYEDLLATAMVKNGPISIVLNAVGMEYY----------------KAGAIDTTLPCEPTTLDHAVLVVGFGEQDGVEYWVVKNSWGSWWGEGGYYRVVKGQNHCGLANFAVTSVIK 972
            V G  +   Q  W   +DCAAC MYP+  +Y   N PT+FDWR     + V +Q YCGSC+SFSTA +IEG  FLATG +   S+QQ+VACD      +GC+GG  Y AMQY+A  GGLV E+ YPYK V           GTP CDTD +   L+   S + HI  +Q VA+GA++E+L+   ++KNGP+++ +NA GM+YY                 AGAIDTT PC+PT LDH VL VG+G Q+G EYWV+KNSWG  WGE GYYR+ +G +HCG+AN     V K
Sbjct:   67 VGGEKLKAGQVRWGGVDDCAACAMYPDFSDYNYTNHPTDFDWRDLGAVSDVKNQKYCGSCYSFSTAQNIEGVHFLATGNLTTFSEQQIVACDFLN---DGCDGGYMYRAMQYIADFGGLVSEDAYPYKAVMM-----DYKLGTPHCDTDLLNEKLEGDGSNIGHISSYQWVAMGAEFENLMKIFLLKNGPLALAVNANGMDYYVHGITGCKTIAGWEYCDAGAIDTTTPCDPTELDHGVLAVGYGNQEGSEYWVIKNSWGPQWGEDGYYRLERGTDHCGVANMVTHGVYK 348          
BLAST of jgi.p|Trimin1|178460 vs. uniprot
Match: A0A7S2BSW9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BSW9_9STRA)

HSP 1 Score: 270 bits (690), Expect = 3.730e-86
Identity = 149/293 (50.85%), Postives = 179/293 (61.09%), Query Frame = 1
Query:  175 ISKSQFGWITEEDCAACGMYPELGNYTLANMPTEFDWR-AKYETPVSSQGYCGSCWSFSTAGDIEGKWFLATGQVVELSKQQLVACDQKRNAAEGCNGGLPYAAMQYVASTGGLVYEEDYPYKNVCAWGTCGSAPKGTPTCDTDQVRGSLKDSA--VAHIGGWQMVALGAQYEDLLATAMVKNGPISIVLNAVGMEYY----------------KAGAID------TTLP--CEPTTLDHAVLVVGFGEQDGVEYWVVKNSWGSWWGEGGYYRVVKGQNHCGLANFAVTSVIK 972
            IS  Q  W   + CAAC  YP    YT  N P  FDWR     T V +Q YCGSCW+FSTA DIEG  FLATG +   S+QQ VACD       GC+GG  +AAMQYVA  G LV EE YPY  V       +    TPTCDTD +   L+     +AHI G+QMVA+GA+YEDL+AT M+KNGP+SI +NA GM+YY                +AGAID      +T+   C PT LDH VL+V +GEQDGV+YWV+KNSW   WGE GYYR+ +G N CG++NFA  SV K
Sbjct:   12 ISVGQVEWADIDMCAACERYPGFKKYTSENRPDNFDWRDLGAVTEVKNQKYCGSCWTFSTAQDIEGTHFLATGNLTSFSEQQFVACDTYNY---GCDGGWMFAAMQYVADFGILVSEEAYPYMGVMM-----TYNLPTPTCDTDLLNSKLEGDGDDIAHIEGYQMVAMGAEYEDLMATYMLKNGPLSIAINANGMDYYVHGIVGCETIAGSEYCEAGAIDAPSDGDSTMEHTCNPTDLDHGVLLVAYGEQDGVDYWVIKNSWAETWGEDGYYRIERGVNKCGVSNFAQHSVYK 296          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|178460 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A836CJR5_9STRA3.840e-235100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CII6_9STRA5.380e-2340.22Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZGN6_9STRA1.100e-856.90Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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BLAST of jgi.p|Trimin1|178460 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CK28_9STRA1.900e-248100.00Pept_C1 domain-containing protein (Fragment) n=1 T... [more]
A0A7S2BCN1_9STRA3.170e-11957.64Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
F0Y246_AURAN1.220e-10750.91Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S2W4U9_9STRA5.200e-10353.74Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A7S2BRB8_9STRA1.770e-9150.87Hypothetical protein n=2 Tax=Florenciella parvula ... [more]
A0A7S2DDK6_9STRA6.860e-9150.72Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
F0Y300_AURAN1.350e-9045.16Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S3K4M5_9STRA4.210e-8847.62Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S2GII5_9STRA2.110e-8748.28Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2BSW9_9STRA3.730e-8650.85Hypothetical protein n=1 Tax=Florenciella parvula ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_170contigContig_170:64230..66043 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|178460|e_gw1.170.19.1
Hectar predicted targeting categoryother localisation
TranscriptId178782
TrackFilteredModels1
ProteinId178460
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|178460gene_15240Tribonema minus UTEX_B_3156 geneContig_170 64230..66043 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_15240_1exon_15240_1Tribonema minus UTEX_B_3156 exonContig_170 64230..65300 +
exon_15240_2exon_15240_2Tribonema minus UTEX_B_3156 exonContig_170 65435..66043 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_15240CDS_15240Tribonema minus UTEX_B_3156 CDSContig_170 64230..65300 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|178460Trimin1|178460|e_gw1.170.19.1Tribonema minus UTEX_B_3156 polypeptideContig_170 64230..66043 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_15240 ID=mRNA_15240|Name=jgi.p|Trimin1|178460|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1680bp|location=Sequence derived from alignment at Contig_170:64230..66043+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGAGACTGCAGTGCAGCACGTCGTCGCCGACCTGCCGCTTCTTCAGTG
GGCAGTAAGCCCAAGCGGTGGGGGTGATACCATGAGCAAGGTCACCTGCG
CTGAGGCGGCTCGAGGTGGCCAGCTCGACTCACTGCAGTGGCTACGAGAA
GCTGGCTGCGGCTGGGACCGGCGCACGTGCACAGAGGCTGCAAGGACGGG
GCACCTGACCATGTTGCAATGGGCTGCAGACGCCGGTGCTCCTATATGTA
AGAACACGGCCATCAAAGACGCTGCCGGGCGGGAGCATCTGCGAGCAGTG
CAGTGGCTGCATGTGCGCGGCTCCTTCTACGAATTCGCTTTGCACGAATC
GGTGTCGGCGGCAGCAAAGGCAGGGCACCTGCACGTCCTTCGATGGTTGC
GCAAAGTCTACCCGCTTAAGACACAGCACTGCAGGGAACTCATGCTCATC
GCTGCGCGTGAAGGCTATCTGGCGATAGTTCACTGGCTGCATGCCAGGCG
CAGCCCCTGGGACGAGACGACGTGTGCAGCAGCTGCCGAGGGCGGCCACC
TGCATGTGCTGCAGTTCTTGCGCCACAACGGATGCCCCTGGGACGAAAGG
ACATGCAGCGCGGCTGCGGCCGGGGGACACTGGGACGTGCTGCTCTTTGC
ACGCGGCGGTGGTTGCCCCTGGGACGAGAGGACTGGCAGCGCGGCGGCGG
CTGGGGGGCACCTGGACGTGCTGCTCTTGGCACGCGAAGATGGCTGCCCC
TGGGACCAAGGAACATGCCATGCGCCACTCTATTCCGGACATCTGGAGGT
GCTGCTTTATGCCAGGGAGCAGGGCTGCGGATGGGCGGCGGACGGCATCT
TGCCGCCTCTGCCAAAGGCAGGGGGTAGGGGTATCATCTGGGGCCACGTC
CCAACGCTCGCAGTTGAAGGTGGGAACGTAGCAGCGCTCAAGTATGTCCT
TGAAAACGGCTGCGCGTGGGGGTATGGCAAATACGGAATCGAGAGCGCAT
GCCTCAGAGCAGCAGAGAAGGGAGATATTGAGATGCTTGACTATCTCCTG
GCTCAGGGCGCGCGTTGCGATGATGTGCAGCCACTGCTGGACATTGCCGC
ACTCTCGGGCGATGTGGGGCTGCTGCAGTGGAGCCATTCGGTAGGCGCCG
ACTTAGACCTGCAGACACTAGTGCGTAGTGCAGTGTCGCACGGGCACTTC
GAGGTCTTGGCGTGGATGCACACAGAAGGCCTTCTGCTGCGCGCGCACGA
CGGTCTTAGGCAGCACGCAACATTGTCCGCAGCGTCGCAAGGCCAACTTC
GCGTATTGAAGTGGCTCAAGGCCTATGGCCTTTTGACAGACGAGGACGTG
TGCGTGACCGCAGCCAGGGCGGCTGAGATCGAGGTGCTAGAGTGGGCGCT
TGAGAGCGGGTGGGCGTGGGACGACCGCATCTGCCTCACATTGTTCACTA
ATGGCGGTGCAGGGTATGCGTATGACAACGTACCACAGAGGTTTAAGGAA
GTCATATATTTGGCACAGACGCGAGGGTGCACCTGCCCCATCCATGAGCA
CTGCCCCATACCCAGAGAAGACCTTGAGGTGTCCGAGCCTGGTGTGATTT
GGGAGTACGACTCCGACACAGTCCACGACCCCGAGTTCTTCCCGTGGTAT
CGCCGTTATGTGACGGAGGACGCGCCATGA
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protein sequence of jgi.p|Trimin1|178460

>Trimin1|178460|e_gw1.170.19.1 ID=Trimin1|178460|e_gw1.170.19.1|Name=jgi.p|Trimin1|178460|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=560bp
METAVQHVVADLPLLQWAVSPSGGGDTMSKVTCAEAARGGQLDSLQWLRE
AGCGWDRRTCTEAARTGHLTMLQWAADAGAPICKNTAIKDAAGREHLRAV
QWLHVRGSFYEFALHESVSAAAKAGHLHVLRWLRKVYPLKTQHCRELMLI
AAREGYLAIVHWLHARRSPWDETTCAAAAEGGHLHVLQFLRHNGCPWDER
TCSAAAAGGHWDVLLFARGGGCPWDERTGSAAAAGGHLDVLLLAREDGCP
WDQGTCHAPLYSGHLEVLLYAREQGCGWAADGILPPLPKAGGRGIIWGHV
PTLAVEGGNVAALKYVLENGCAWGYGKYGIESACLRAAEKGDIEMLDYLL
AQGARCDDVQPLLDIAALSGDVGLLQWSHSVGADLDLQTLVRSAVSHGHF
EVLAWMHTEGLLLRAHDGLRQHATLSAASQGQLRVLKWLKAYGLLTDEDV
CVTAARAAEIEVLEWALESGWAWDDRICLTLFTNGGAGYAYDNVPQRFKE
VIYLAQTRGCTCPIHEHCPIPREDLEVSEPGVIWEYDSDTVHDPEFFPWY
RRYVTEDAP*
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mRNA from alignment at Contig_170:64230..66043+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_15240 ID=mRNA_15240|Name=jgi.p|Trimin1|178460|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1814bp|location=Sequence derived from alignment at Contig_170:64230..66043+ (Tribonema minus UTEX_B_3156 )
ATGGAGACTGCAGTGCAGCACGTCGTCGCCGACCTGCCGCTTCTTCAGTG GGCAGTAAGCCCAAGCGGTGGGGGTGATACCATGAGCAAGGTCACCTGCG CTGAGGCGGCTCGAGGTGGCCAGCTCGACTCACTGCAGTGGCTACGAGAA GCTGGCTGCGGCTGGGACCGGCGCACGTGCACAGAGGCTGCAAGGACGGG GCACCTGACCATGTTGCAATGGGCTGCAGACGCCGGTGCTCCTATATGTA AGAACACGGCCATCAAAGACGCTGCCGGGCGGGAGCATCTGCGAGCAGTG CAGTGGCTGCATGTGCGCGGCTCCTTCTACGAATTCGCTTTGCACGAATC GGTGTCGGCGGCAGCAAAGGCAGGGCACCTGCACGTCCTTCGATGGTTGC GCAAAGTCTACCCGCTTAAGACACAGCACTGCAGGGAACTCATGCTCATC GCTGCGCGTGAAGGCTATCTGGCGATAGTTCACTGGCTGCATGCCAGGCG CAGCCCCTGGGACGAGACGACGTGTGCAGCAGCTGCCGAGGGCGGCCACC TGCATGTGCTGCAGTTCTTGCGCCACAACGGATGCCCCTGGGACGAAAGG ACATGCAGCGCGGCTGCGGCCGGGGGACACTGGGACGTGCTGCTCTTTGC ACGCGGCGGTGGTTGCCCCTGGGACGAGAGGACTGGCAGCGCGGCGGCGG CTGGGGGGCACCTGGACGTGCTGCTCTTGGCACGCGAAGATGGCTGCCCC TGGGACCAAGGAACATGCCATGCGCCACTCTATTCCGGACATCTGGAGGT GCTGCTTTATGCCAGGGAGCAGGGCTGCGGATGGGCGGCGGACGGCATCT TGCCGCCTCTGCCAAAGGCAGGGGGTAGGGGTATCATCTGGGGCCACGTC CCAACGCTCGCAGTTGAAGGTGGGAACGTAGCAGCGCTCAAGTATGTCCT TGAAAACGGCTGCGCGTGGGGGTATGGCAAATACGGAATCGAGAGCGCAT GCCTCAGAGCAGCAGAGAAGGGAGATATTGAGATGCTTGACTATCTCCTG GCTCAGGGCGCGCGTTGCGATGTCGAAGAAATCAGCAAGCGGGGGATTCT TACAGAGCGGGAAATTAGAGCGCGTGGGATTATTACAAAGCGGGGACGTG AAGGGGGCAGATTGTGCAGGTGTCGATTGCAAAGTGGCTCCACGCAAGGG GTCAGGATGTGCAGCCACTGCTGGACATTGCCGCACTCTCGGGCGATGTG GGGCTGCTGCAGTGGAGCCATTCGGTAGGCGCCGACTTAGACCTGCAGAC ACTAGTGCGTAGTGCAGTGTCGCACGGGCACTTCGAGGTCTTGGCGTGGA TGCACACAGAAGGCCTTCTGCTGCGCGCGCACGACGGTCTTAGGCAGCAC GCAACATTGTCCGCAGCGTCGCAAGGCCAACTTCGCGTATTGAAGTGGCT CAAGGCCTATGGCCTTTTGACAGACGAGGACGTGTGCGTGACCGCAGCCA GGGCGGCTGAGATCGAGGTGCTAGAGTGGGCGCTTGAGAGCGGGTGGGCG TGGGACGACCGCATCTGCCTCACATTGTTCACTAATGGCGGTGCAGGGTA TGCGTATGACAACGTACCACAGAGGTTTAAGGAAGTCATATATTTGGCAC AGACGCGAGGGTGCACCTGCCCCATCCATGAGCACTGCCCCATACCCAGA GAAGACCTTGAGGTGTCCGAGCCTGGTGTGATTTGGGAGTACGACTCCGA CACAGTCCACGACCCCGAGTTCTTCCCGTGGTATCGCCGTTATGTGACGG AGGACGCGCCATGA
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Coding sequence (CDS) from alignment at Contig_170:64230..66043+

>mRNA_15240 ID=mRNA_15240|Name=jgi.p|Trimin1|178460|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1680bp|location=Sequence derived from alignment at Contig_170:64230..66043+ (Tribonema minus UTEX_B_3156 )
ATGGAGACTGCAGTGCAGCACGTCGTCGCCGACCTGCCGCTTCTTCAGTG
GGCAGTAAGCCCAAGCGGTGGGGGTGATACCATGAGCAAGGTCACCTGCG
CTGAGGCGGCTCGAGGTGGCCAGCTCGACTCACTGCAGTGGCTACGAGAA
GCTGGCTGCGGCTGGGACCGGCGCACGTGCACAGAGGCTGCAAGGACGGG
GCACCTGACCATGTTGCAATGGGCTGCAGACGCCGGTGCTCCTATATGTA
AGAACACGGCCATCAAAGACGCTGCCGGGCGGGAGCATCTGCGAGCAGTG
CAGTGGCTGCATGTGCGCGGCTCCTTCTACGAATTCGCTTTGCACGAATC
GGTGTCGGCGGCAGCAAAGGCAGGGCACCTGCACGTCCTTCGATGGTTGC
GCAAAGTCTACCCGCTTAAGACACAGCACTGCAGGGAACTCATGCTCATC
GCTGCGCGTGAAGGCTATCTGGCGATAGTTCACTGGCTGCATGCCAGGCG
CAGCCCCTGGGACGAGACGACGTGTGCAGCAGCTGCCGAGGGCGGCCACC
TGCATGTGCTGCAGTTCTTGCGCCACAACGGATGCCCCTGGGACGAAAGG
ACATGCAGCGCGGCTGCGGCCGGGGGACACTGGGACGTGCTGCTCTTTGC
ACGCGGCGGTGGTTGCCCCTGGGACGAGAGGACTGGCAGCGCGGCGGCGG
CTGGGGGGCACCTGGACGTGCTGCTCTTGGCACGCGAAGATGGCTGCCCC
TGGGACCAAGGAACATGCCATGCGCCACTCTATTCCGGACATCTGGAGGT
GCTGCTTTATGCCAGGGAGCAGGGCTGCGGATGGGCGGCGGACGGCATCT
TGCCGCCTCTGCCAAAGGCAGGGGGTAGGGGTATCATCTGGGGCCACGTC
CCAACGCTCGCAGTTGAAGGTGGGAACGTAGCAGCGCTCAAGTATGTCCT
TGAAAACGGCTGCGCGTGGGGGTATGGCAAATACGGAATCGAGAGCGCAT
GCCTCAGAGCAGCAGAGAAGGGAGATATTGAGATGCTTGACTATCTCCTG
GCTCAGGGCGCGCGTTGCGATGATGTGCAGCCACTGCTGGACATTGCCGC
ACTCTCGGGCGATGTGGGGCTGCTGCAGTGGAGCCATTCGGTAGGCGCCG
ACTTAGACCTGCAGACACTAGTGCGTAGTGCAGTGTCGCACGGGCACTTC
GAGGTCTTGGCGTGGATGCACACAGAAGGCCTTCTGCTGCGCGCGCACGA
CGGTCTTAGGCAGCACGCAACATTGTCCGCAGCGTCGCAAGGCCAACTTC
GCGTATTGAAGTGGCTCAAGGCCTATGGCCTTTTGACAGACGAGGACGTG
TGCGTGACCGCAGCCAGGGCGGCTGAGATCGAGGTGCTAGAGTGGGCGCT
TGAGAGCGGGTGGGCGTGGGACGACCGCATCTGCCTCACATTGTTCACTA
ATGGCGGTGCAGGGTATGCGTATGACAACGTACCACAGAGGTTTAAGGAA
GTCATATATTTGGCACAGACGCGAGGGTGCACCTGCCCCATCCATGAGCA
CTGCCCCATACCCAGAGAAGACCTTGAGGTGTCCGAGCCTGGTGTGATTT
GGGAGTACGACTCCGACACAGTCCACGACCCCGAGTTCTTCCCGTGGTAT
CGCCGTTATGTGACGGAGGACGCGCCATGA
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