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Homology
BLAST of jgi.p|Trimin1|353554 vs. uniprot
Match: A0A835Z5Z0_9STRA (Calponin-homology (CH) domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5Z0_9STRA) HSP 1 Score: 1561 bits (4041), Expect = 0.000e+0 Identity = 879/879 (100.00%), Postives = 879/879 (100.00%), Query Frame = 1
Query: 1 MDVELTDEDLQKLYAWVDEIPLSRPKRNIARDFSDGVLTAEVVAHYFPRLVELHNYSAANSVAQKLYNWGTLNTKVFRRLAFQLQQPDIEALAQCKPGAVEKLLYELQLRMANYRAKQRRASATSAQSGESENGQDTSQTGEDSSDRGGGGSAAGRSAPGPNLRGVVTILEQKVARLEQLVHMKDLKIARLEAALQAAEDALDGERRARERLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYDDQQLSADFDELQLQRGGGGAAPVRRMSGRAFTGYLSWRDALLLMIADYIGAFLGGILVYLTYLPHFSLVPPAPQRPHWPETTILPPENGGTRAALISYDAHGLTGSTARAPVELRRRRVESRGRMGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVEMLDIAESVRRSRSSFNGLSSVEERGGSYAPSADIGRPAYAEPTAAPPPPPQIGNGQKSEIGSGQKGEAAGCGKLLRELKAIVEVHLHPGDILQVERSDGGMSTATDYDKLLGESDQLHRAYLASLLADQNSKLTCFCTRPAVAARKRNSRDAAPCEWGGKPCPHADDAFALTAALDAGSPCALESKRNYAFTLCEVVGTFMLIWTVLMLELRVELLPQSAKDNGYLITQAFLVGFVVVGLIMGMAGPTGYAANPARDWGPRLAHFVLPIPNKGSSEWMRAMAFKAFVGRDGKTAVHFLACRGDVKIYSPHTHHRSADLLHSGMANLDDHVSLTELFESTHXXXXXXXXXXXXXXXXXXXXEHCGVTWSWEFAMPPCSDAAGPGLVSPPRMLSVTAMHILKKRLSAWNPCSAFVVVAPVSGYYAPVPFFGGYVGGFLGALAFHLCRYLYNFPATFEGPENFGGNWNCAGKHCFPLPE 2637
MDVELTDEDLQKLYAWVDEIPLSRPKRNIARDFSDGVLTAEVVAHYFPRLVELHNYSAANSVAQKLYNWGTLNTKVFRRLAFQLQQPDIEALAQCKPGAVEKLLYELQLRMANYRAKQRRASATSAQSGESENGQDTSQTGEDSSDRGGGGSAAGRSAPGPNLRGVVTILEQKVARLEQLVHMKDLKIARLEAALQAAEDALDGERRARERLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYDDQQLSADFDELQLQRGGGGAAPVRRMSGRAFTGYLSWRDALLLMIADYIGAFLGGILVYLTYLPHFSLVPPAPQRPHWPETTILPPENGGTRAALISYDAHGLTGSTARAPVELRRRRVESRGRMGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVEMLDIAESVRRSRSSFNGLSSVEERGGSYAPSADIGRPAYAEPTAAPPPPPQIGNGQKSEIGSGQKGEAAGCGKLLRELKAIVEVHLHPGDILQVERSDGGMSTATDYDKLLGESDQLHRAYLASLLADQNSKLTCFCTRPAVAARKRNSRDAAPCEWGGKPCPHADDAFALTAALDAGSPCALESKRNYAFTLCEVVGTFMLIWTVLMLELRVELLPQSAKDNGYLITQAFLVGFVVVGLIMGMAGPTGYAANPARDWGPRLAHFVLPIPNKGSSEWMRAMAFKAFVGRDGKTAVHFLACRGDVKIYSPHTHHRSADLLHSGMANLDDHVSLTELFESTHXXXXXXXXXXXXXXXXXXXXEHCGVTWSWEFAMPPCSDAAGPGLVSPPRMLSVTAMHILKKRLSAWNPCSAFVVVAPVSGYYAPVPFFGGYVGGFLGALAFHLCRYLYNFPATFEGPENFGGNWNCAGKHCFPLPE
Sbjct: 1 MDVELTDEDLQKLYAWVDEIPLSRPKRNIARDFSDGVLTAEVVAHYFPRLVELHNYSAANSVAQKLYNWGTLNTKVFRRLAFQLQQPDIEALAQCKPGAVEKLLYELQLRMANYRAKQRRASATSAQSGESENGQDTSQTGEDSSDRGGGGSAAGRSAPGPNLRGVVTILEQKVARLEQLVHMKDLKIARLEAALQAAEDALDGERRARERLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYDDQQLSADFDELQLQRGGGGAAPVRRMSGRAFTGYLSWRDALLLMIADYIGAFLGGILVYLTYLPHFSLVPPAPQRPHWPETTILPPENGGTRAALISYDAHGLTGSTARAPVELRRRRVESRGRMGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVEMLDIAESVRRSRSSFNGLSSVEERGGSYAPSADIGRPAYAEPTAAPPPPPQIGNGQKSEIGSGQKGEAAGCGKLLRELKAIVEVHLHPGDILQVERSDGGMSTATDYDKLLGESDQLHRAYLASLLADQNSKLTCFCTRPAVAARKRNSRDAAPCEWGGKPCPHADDAFALTAALDAGSPCALESKRNYAFTLCEVVGTFMLIWTVLMLELRVELLPQSAKDNGYLITQAFLVGFVVVGLIMGMAGPTGYAANPARDWGPRLAHFVLPIPNKGSSEWMRAMAFKAFVGRDGKTAVHFLACRGDVKIYSPHTHHRSADLLHSGMANLDDHVSLTELFESTHXXXXXXXXXXXXXXXXXXXXEHCGVTWSWEFAMPPCSDAAGPGLVSPPRMLSVTAMHILKKRLSAWNPCSAFVVVAPVSGYYAPVPFFGGYVGGFLGALAFHLCRYLYNFPATFEGPENFGGNWNCAGKHCFPLPE 879
BLAST of jgi.p|Trimin1|353554 vs. uniprot
Match: A0A7S0JIM5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JIM5_9EUKA) HSP 1 Score: 180 bits (457), Expect = 6.490e-48 Identity = 109/228 (47.81%), Postives = 135/228 (59.21%), Query Frame = 1
Query: 13 LTDEDLQKLYAWVDEIPLSRPKRNIARDFSDGVLTAEVVAHYFPRLVELHNYSAANSVAQKLYNWGTLNTKVFRRLAFQLQQPDIEALAQCKPGAVEKLLYELQLRMANYRAKQRRASATSAQSGES-------ENGQDTSQTGEDSSDRGGGGSAAGRSAPGPN-----------------------------LRGVVTILEQKVARLEQLVHMKDLKIARLEAALQ 588
L D+DLQ++Y WVDEIPLSRPKRNIARDFSDGVL AE+VAHYFP+LVE+HNY AANS AQK+YNW TLN KVF+++ F L+Q +++AL C+P AVEK L LQ RMA Y A+Q S + +G S E+G Q+ ++ G A R A G LR V ILE K+ +LEQLV +KD KI L+ LQ
Sbjct: 6 LDDDDLQRIYTWVDEIPLSRPKRNIARDFSDGVLMAEIVAHYFPKLVEMHNYPAANSYAQKIYNWNTLNAKVFKKMGFALRQEEMDALCNCQPQAVEKTLKNLQQRMAKYGARQAEISRVAGGNGSSPSTDVAQESGVAAPQSVRSTAPHSAAGVQAAREARGVGGAQAKLGQLGLHDSALQELLAEKDHNIHELRETVDILEMKIQKLEQLVRLKDSKIVTLQTKLQ 233
BLAST of jgi.p|Trimin1|353554 vs. uniprot
Match: A0A8J2WVQ1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WVQ1_9STRA) HSP 1 Score: 177 bits (450), Expect = 2.060e-47 Identity = 105/198 (53.03%), Postives = 133/198 (67.17%), Query Frame = 1
Query: 13 LTDEDLQKLYAWVDEIPLSRPKRNIARDFSDGVLTAEVVAHYFPRLVELHNYSAANSVAQKLYNWGTLNTKVFRRLAFQLQQPDIEALAQCKPGAVEKLLYELQLRMANYRAKQRR---ASATSAQSGES-----ENGQDTSQTGEDSSDRGGGGSAAGRSAPGPNLRGVVTILEQKVARLEQLVHMKDLKIARLEAA 582
+ D++LQ+LYAWVDEIPLSRPKRNIARDF+DGVL AEV HYFPRLV+LHNY ANS+ QKLYNW TLN +V R+L L + D+EA+ QC PGAVE++L LQL+MA YRA Q+R A AT+ + E+ + + Q D + +LR V ILEQK+A+LEQLV +KD KI +L+ A
Sbjct: 5 MDDDELQRLYAWVDEIPLSRPKRNIARDFADGVLAAEVCHHYFPRLVDLHNYPPANSMRQKLYNWDTLNARVLRKLDAALPRADVEAVCQCAPGAVERVLNTLQLKMARYRANQQRRKEAKATTQANNEAVAPPPAKAKASLQADVDQE------LLVEKEQEIHDLRETVDILEQKIAKLEQLVRLKDAKIQKLKDA 196
BLAST of jgi.p|Trimin1|353554 vs. uniprot
Match: A0A7S1CID1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CID1_9STRA) HSP 1 Score: 175 bits (443), Expect = 5.630e-47 Identity = 81/117 (69.23%), Postives = 97/117 (82.91%), Query Frame = 1
Query: 1 MDVELTDEDLQKLYAWVDEIPLSRPKRNIARDFSDGVLTAEVVAHYFPRLVELHNYSAANSVAQKLYNWGTLNTKVFRRLAFQLQQPDIEALAQCKPGAVEKLLYELQLRMANYRAK 351
M L D+ LQK+Y+WVDEIPLSRPKRNI RDFSDGV+ AEVVAHYFPRLVE+HNYS ANSV QKLYNW TLN KVF++L F + +PD++A+ CKPG VE +LY+LQ +MA YRA+
Sbjct: 46 MAAPLDDDQLQKIYSWVDEIPLSRPKRNITRDFSDGVMMAEVVAHYFPRLVEMHNYSPANSVRQKLYNWATLNQKVFKKLGFAVAKPDVDAVVNCKPGVVESVLYQLQSKMAAYRAR 162
BLAST of jgi.p|Trimin1|353554 vs. uniprot
Match: A0A7S4FAW6_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4FAW6_CHRCT) HSP 1 Score: 177 bits (449), Expect = 2.430e-46 Identity = 108/240 (45.00%), Postives = 137/240 (57.08%), Query Frame = 1
Query: 13 LTDEDLQKLYAWVDEIPLSRPKRNIARDFSDGVLTAEVVAHYFPRLVELHNYSAANSVAQKLYNWGTLNTKVFRRLAFQLQQPDIEALAQCKPGAVEKLLYELQLRMANYRAKQRRASATSAQSGESENGQDTSQTGEDSSDRGGGGSAAGRSAPGPN---------------------------------------------LRGVVTILEQKVARLEQLVHMKDLKIARLEAALQAAE 597
+ DE+LQ++Y WVDE+PLSRPKRNIARDF+DGVLTAE+VAHYFP+LVE+HNY AANS AQK+YNW TLN KVF+++ FQL+Q +++AL C+P AVEK+L LQ RMA Y A++ E ++G Q+ S +APGPN LR V ILE K+ +LEQLV +KD KIA L+A LQ E
Sbjct: 50 MDDEELQRIYTWVDEVPLSRPKRNIARDFADGVLTAEMVAHYFPKLVEMHNYPAANSYAQKIYNWNTLNAKVFKKMGFQLKQEEMDALCNCQPQAVEKMLKNLQQRMAKYGARK----------AEQDSGDAPPQSAAPPS------RVPRAAAPGPNGGIGSVSPPGAARGVAAAEARMANMGLHDGSVQELLAEKDHNIQELRETVDILEVKIQKLEQLVRLKDSKIATLQAKLQQFE 273
BLAST of jgi.p|Trimin1|353554 vs. uniprot
Match: A0A1Y1I7X9_KLENI (Calponin-homology (CH) domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I7X9_KLENI) HSP 1 Score: 174 bits (441), Expect = 7.240e-46 Identity = 104/217 (47.93%), Postives = 137/217 (63.13%), Query Frame = 1
Query: 10 ELTDEDLQKLYAWVDEIPLSRPKRNIARDFSDGVLTAEVVAHYFPRLVELHNYSAANSVAQKLYNWGTLNTKVFRRLAFQLQQPDIEALAQCKPGAVEKLLYELQLRMANYRAKQRRASAT---------SAQSGESENGQDTSQTGEDSSDRGGGGSA-------------AGRSAPGPNLRGVVTILEQKVARLEQLVHMKDLKIARLEAALQAA 594
EL++ +LQ LY WVDEIPLSRPKRNIARDFSDGVL AE+VAHYFP+ VE HNYS AN AQK+YNW TLN KVF++L F + + +IEA++ C PGA+EKLL +L++++A Y+ +R +S+ ++QSG G S + S G G+A A + A LR +L+ KV +LEQLV +K+ KI L A LQ A
Sbjct: 6 ELSEAELQNLYTWVDEIPLSRPKRNIARDFSDGVLAAEIVAHYFPKTVETHNYSQANGFAQKMYNWNTLNLKVFKKLQFSVTREEIEAISNCVPGAIEKLLKQLKVKIAKYKPGRRPSSSEGPAPGTEGMASQSGHQRRGDSLSPNSKALSYGGANGTATDPTRRFQDLEAVAEKDAKILELRETNELLDSKVKKLEQLVRLKESKIQALTAKLQQA 222
BLAST of jgi.p|Trimin1|353554 vs. uniprot
Match: R1C9R5_EMIHU (Calponin-homology (CH) domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1C9R5_EMIHU) HSP 1 Score: 171 bits (432), Expect = 7.000e-45 Identity = 97/212 (45.75%), Postives = 138/212 (65.09%), Query Frame = 1
Query: 13 LTDEDLQKLYAWVDEIPLSRPKRNIARDFSDGVLTAEVVAHYFPRLVELHNYSAANSVAQKLYNWGTLNTKVFRRLAFQLQQPDIEALAQCKPGAVEKLLYELQLRMANYRAKQRRASATSAQSGESENGQDTSQTGEDSSDRGGGGSAAGRSAPG-----------------PNLRGVVTILEQKVARLEQLVHMKDLKIARLEAALQAAE 597
+ D++LQ++Y WVDE+PLSRPKRNIARDF+DGVLTAE+V HYFPR+VE+HNY +ANS AQK+YNW TLN +VF+++ +QL+Q +++A+ C+P AVE++L +LQ+R++ Y ++ + A + + Q T ++ R GG AG + G LR V ILE K+ +LEQLV +KD KIA L+ LQ E
Sbjct: 1 MDDDELQRIYTWVDEVPLSRPKRNIARDFADGVLTAEIVHHYFPRIVEVHNYPSANSYAQKMYNWQTLNARVFKKMGWQLRQEELDAICSCQPQAVERMLKQLQVRLSKYGSRSKEEEAAPQRP----HAQATPRSAAAPPRRVGG--LAGGAQVGLRDGAVQELLAEKDQNISELRETVEILEIKIQKLEQLVRLKDSKIATLQGKLQKYE 206
BLAST of jgi.p|Trimin1|353554 vs. uniprot
Match: A0A024U2C0_9STRA (Calponin-homology (CH) domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U2C0_9STRA) HSP 1 Score: 170 bits (431), Expect = 3.350e-44 Identity = 79/122 (64.75%), Postives = 104/122 (85.25%), Query Frame = 1
Query: 7 VELTDEDLQKLYAWVDEIPLSRPKRNIARDFSDGVLTAEVVAHYFPRLVELHNYSAANSVAQKLYNWGTLNTKVFRRLAFQLQQPDIEALAQCKPGAVEKLLYELQLRMANYRAKQRRASAT 372
+ L DE LQK+YAW+DE+PLSRPK+N+ RDFSDG+L AEV+A+YFP+LV++HNYS+ANS+ QK YNWGTLNTKV +RL FQL + +I+ + QCKPGAVE+ L +LQ+++ANYR RRAS+T
Sbjct: 4 IVLDDEILQKIYAWIDEVPLSRPKKNMGRDFSDGILAAEVIAYYFPKLVQMHNYSSANSLTQKQYNWGTLNTKVLKRLGFQLTKKEIDDIVQCKPGAVEEFLSKLQVKIANYRL--RRASST 123
BLAST of jgi.p|Trimin1|353554 vs. uniprot
Match: A0A397AXI6_9STRA (Calponin-homology (CH) domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397AXI6_9STRA) HSP 1 Score: 168 bits (425), Expect = 5.350e-44 Identity = 80/122 (65.57%), Postives = 101/122 (82.79%), Query Frame = 1
Query: 7 VELTDEDLQKLYAWVDEIPLSRPKRNIARDFSDGVLTAEVVAHYFPRLVELHNYSAANSVAQKLYNWGTLNTKVFRRLAFQLQQPDIEALAQCKPGAVEKLLYELQLRMANYRAKQRRASAT 372
+ L DE LQK+YAW+DE+PLSRPK+N+ RDFSDG+L AEVVA YFP+LV++HNYS+ANSV QK YNWGTLN KV +RL FQL + DI+ + QCKPGAVE+ L +LQ+++ANYR RR S+T
Sbjct: 4 IMLDDEILQKIYAWIDEVPLSRPKKNMGRDFSDGILAAEVVAFYFPKLVQMHNYSSANSVTQKQYNWGTLNRKVLKRLGFQLTKRDIDDIVQCKPGAVEEFLSKLQVKIANYRL--RRTSST 123
BLAST of jgi.p|Trimin1|353554 vs. uniprot
Match: A0A7S3VM96_DUNTE (Hypothetical protein n=2 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3VM96_DUNTE) HSP 1 Score: 167 bits (424), Expect = 1.860e-43 Identity = 106/229 (46.29%), Postives = 140/229 (61.14%), Query Frame = 1
Query: 7 VELTDEDLQKLYAWVDEIPLSRPKRNIARDFSDGVLTAEVVAHYFPRLVELHNYSAANSVAQKLYNWGTLNTKVFRRLAFQLQQPDIEALAQCKPGAVEKLLYELQLRMANYRAKQRRASATS---------------------AQSGESENGQD---TSQTGEDSSDR---------GGGGSAAGRSAPGPNLRGVVTILEQKVARLEQLVHMKDLKIARLEAALQAA 594
+++++ +LQ LY WVDEIPLSRPKRNIARDFSDGVL AEVVAHYFPRLV+LHNYSAAN+ AQK+YNW T+N KVF+RL F + + D EA+A C+PGA+E+LL ++++A ++ + + T+ A SG ++NG D +Q S G +AA + LR ILE KV ++EQLV +KD KIA L LQAA
Sbjct: 2 MDVSEAELQGLYTWVDEIPLSRPKRNIARDFSDGVLFAEVVAHYFPRLVDLHNYSAANNTAQKMYNWNTMNQKVFKRLGFSVAKQDFEAIANCQPGAIERLLKLAKIKIAKFKEEGGAGAFTAPAVPRVANLAHHHSEQHMGGQAPSGYTQNGGDPMGAAQRAHAHSQXXXHANVLMTGRSEAAAEKDHTLNELRETNEILETKVRKMEQLVRLKDSKIATLMGKLQAA 230
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| ProteomeId | Trimin1|353554|estExt_Genemark1.C_Ctg_1700005 |
| GOs | GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005856,GO:0005929,GO:0005930,GO:0006928,GO:0007026,GO:0007498,GO:0008017,GO:0008092,GO:0008150,GO:0009888,GO:0009987,GO:0010639,GO:0015631,GO:0016477,GO:0031110,GO:0031111,GO:0031114,GO:0031514,GO:0032502,GO:0032838,GO:0032886,GO:0033043,GO:0040011,GO:0042995,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043242,GO:0043244,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0048519,GO:0048523,GO:0048856,GO:0048870,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051179,GO:0051493,GO:0051494,GO:0051674,GO:0065007,GO:0070507,GO:0097014,GO:0099568,GO:0120025,GO:0120038,GO:1901879,GO:1901880,GO:1902903,GO:1902904 |
| Preferred name | SPEF1 |
| Description | CH-like domain in sperm protein |
| COG category | S |
| Max annot lvl | 2759|Eukaryota |
| EggNOG OGs | 2CSC3@1|root,2S497@2759|Eukaryota |
| Evalue | 9.86e-46 |
| Seed ortholog | 2903.EOD15384 |
| Hectar predicted targeting category | other localisation |
| TranscriptId | 353876 |
| Track | FilteredModels1 |
| ProteinId | 353554 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_15238 ID=mRNA_15238|Name=jgi.p|Trimin1|353554|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2774bp|location=Sequence derived from alignment at Contig_170:27036..40490- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.
ATGGACGTAGAGCTGACCGACGAGGATCTGCAGAAGCTATATGCGTGGGT GGACGAAATACCACTAAGCAGGCCCAAGAGGAACATCGCTAGAGACTTCA GCGATGGTGTATTGACAGCGGAGGTGGTGGCGCACTACTTCCCGCGCCTC GTGGAGCTGCACAACTACTCCGCCGCCAACAGCGTCGCGCAGAAGCTCTA CAACTGGGGCACGCTCAACACGAAGGTGTTCCGGCGGCTGGCGTTCCAGC TGCAGCAGCCGGACATAGAGGCGCTCGCGCAGTGTAAGCCAGGCGCGGTG GAGAAGCTCCTGTACGAGCTGCAGCTGCGCATGGCCAACTACCGCGCGAA GCAGCGCAGGGCGTCGGCGACGTCCGCGCAGAGCGGCGAGAGCGAGAACG GCCAGGACACGTCGCAGACCGGCGAGGACAGCTCGGACAGGGGCGGCGGC GGCAGCGCGGCAGGACGGTCCGCCCCAGGCCCAAATTTGCGCGGCGTGGT GACGATTTTGGAGCAGAAGGTGGCGCGGCTCGAGCAGCTCGTACACATGA AGGACCTCAAGATCGCGCGCCTCGAGGCAGCGCTGCAGGCGGCGGAGGAC GCGCTGGACGGGGAGCGGCGCGCGCGCGAGCGGCTGCAGCAGCAGCAGCA GCAGCAGGCGCCGCAGCAGCAGCACGGCCATGCGTACCAGGCGCAGTACC AGCAGCAGCGGCAGCAGCAGCGGCAGGAGTACGATGACCAGCAGCTGAGC GCTGACTTTGATGAGCTGCAGCTGCAGCGAGGCGGCGGCGGCGCGGCGCC GGTGCGGCGGATGTCGGGCAGGGCCTTCACAGGCTACCTCTCCTGGCGCG ATGCTCTCCTGCTGATGATCGCCGACTACATCGGCGCGTTCCTCGGCGGC ATCCTGGTCTACCTCACGTACCTGCCGCACTTCAGCCTCGTGCCGCCGGC GCCGCAGCGCCCGCACTGGCCGGAGACCACGATACTGCCGCCGGAGAACG GCGGCACGCGCGCGGCGCTCATATCGTACGACGCGCACGGCCTCACCGGC AGCACCGCGCGCGCGCCCGTGGAGCTGCGGCGGCGGCGCGTCGAGTCGAG GGGGCGCATGGGGGGCATATCGTACGACGTGCGCGGCCTCACGGGCAGCA ACGCGCGCGCGCCCGTGGAGCTGCGGCGGCGGCGCGTCGAGCGCAAGGGC AGCGTAGAGATGCTGGACATCGCCGAGTCCGTGCGCCGCAGCCGCAGCTC CTTCAACGGTCTGAGCTCCGTCGAGGAGCGCGGCGGCAGCTACGCGCCGT CGGCTGACATCGGGCGGCCGGCCTACGCGGAACCCACGGCAGCGCCGCCG CCACCGCCGCAGATAGGCAACGGCCAGAAGAGCGAGATAGGCAGCGGCCA GAAGGGCGAGGCGGCGGGGTGCGGCAAGCTGCTGCGCGAGCTCAAGGCGA TCGTTGAAGTTCACCTGCACCCCGGCGACATACTTCAAGTGGAGCGCAGC GACGGCGGCATGAGCACTGCCACCGACTACGACAAGCTGCTGGGGGAGAG CGACCAGCTGCACCGCGCGTACCTCGCGTCCCTGCTGGCCGACCAGAACT CCAAGCTGACGTGCTTCTGCACGCGCCCGGCGGTCGCTGCACGCAAAAGA AACTCGCGCGATGCAGCGCCGTGTGAATGGGGTGGGAAGCCGTGCCCTCA TGCGGACGATGCGTTCGCGCTCACAGCAGCGCTCGACGCCGGCTCGCCGT GCGCGCTTGAATCAAAACGCAACTACGCCTTCACGCTCTGCGAAGTCGTC GGCACCTTCATGCTCATCTGGACCGTCCTGATGCTGGAGCTGCGAGTAGA GCTCCTGCCGCAAAGCGCCAAGGACAACGGCTACCTCATCACGCAGGCCT TCCTCGTTGGCTTCGTCGTCGTCGGCCTCATCATGGGCATGGCAGGGCCC ACGGGCTACGCCGCCAACCCCGCGCGCGACTGGGGGCCGCGCTTAGCGCA CTTCGTGCTGCCCATCCCCAACAAGGGCTCCTCAGAGTGGATGCGCGCGA TGGCCTTCAAGGCGTTTGTCGGCAGAGACGGCAAGACCGCGGTACACTTC CTGGCCTGCCGCGGCGACGTCAAGATCTACAGTCCGCACACTCACCACAG GAGCGCCGATTTACTGCACAGCGGCATGGCGAACCTCGACGACCACGTAT CCCTCACGGAGCTCTTCGAGTCGACCCACGAATCGACCCACAAGTCAACC CACGAGTCGACCCACGAGTCGACCCACAAGTCGACGCACGAGCACTGTGG GGTTACGTGGTCGTGGGAGTTCGCCATGCCGCCTTGCAGCGACGCCGCTG GCCCCGGTCTGGTCTCGCCCCCGCGCATGCTGAGCGTCACGGCCATGCAC ATCTTGAAGAAGCGCTTGTCCGCATGGAATCCGTGCAGCGCGTTCGTGGT GGTGGCGCCGGTTTCGGGGTACTACGCGCCAGTGCCGTTCTTTGGCGGTT ACGTGGGCGGTTTCCTGGGCGCGCTCGCGTTCCACCTGTGCCGCTACCTC TACAACTTCCCCGCCACGTTCGAGGGGCCCGAGAACTTTGGCGGCAACTG GAACTGCGCCGGCAAGCACTGCTTCCCGCTGCCAGAGTAGCGCCGGCGCT GATGCCGATGGCGCTGCACTACAGTACTAGCGCTCTGCTAGCGCCGAGCC CTCTTTACAGGCATCTGTGGCATGGGCTCAGCAACTGTCAAGGGGCCCGT TGGCCCCTCCCACGAACCCCCGCG back to topprotein sequence of jgi.p|Trimin1|353554 >Trimin1|353554|estExt_Genemark1.C_Ctg_1700005 ID=Trimin1|353554|estExt_Genemark1.C_Ctg_1700005|Name=jgi.p|Trimin1|353554|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=880bp
MDVELTDEDLQKLYAWVDEIPLSRPKRNIARDFSDGVLTAEVVAHYFPRL VELHNYSAANSVAQKLYNWGTLNTKVFRRLAFQLQQPDIEALAQCKPGAV EKLLYELQLRMANYRAKQRRASATSAQSGESENGQDTSQTGEDSSDRGGG GSAAGRSAPGPNLRGVVTILEQKVARLEQLVHMKDLKIARLEAALQAAED ALDGERRARERLQQQQQQQAPQQQHGHAYQAQYQQQRQQQRQEYDDQQLS ADFDELQLQRGGGGAAPVRRMSGRAFTGYLSWRDALLLMIADYIGAFLGG ILVYLTYLPHFSLVPPAPQRPHWPETTILPPENGGTRAALISYDAHGLTG STARAPVELRRRRVESRGRMGGISYDVRGLTGSNARAPVELRRRRVERKG SVEMLDIAESVRRSRSSFNGLSSVEERGGSYAPSADIGRPAYAEPTAAPP PPPQIGNGQKSEIGSGQKGEAAGCGKLLRELKAIVEVHLHPGDILQVERS DGGMSTATDYDKLLGESDQLHRAYLASLLADQNSKLTCFCTRPAVAARKR NSRDAAPCEWGGKPCPHADDAFALTAALDAGSPCALESKRNYAFTLCEVV GTFMLIWTVLMLELRVELLPQSAKDNGYLITQAFLVGFVVVGLIMGMAGP TGYAANPARDWGPRLAHFVLPIPNKGSSEWMRAMAFKAFVGRDGKTAVHF LACRGDVKIYSPHTHHRSADLLHSGMANLDDHVSLTELFESTHESTHKST HESTHESTHKSTHEHCGVTWSWEFAMPPCSDAAGPGLVSPPRMLSVTAMH ILKKRLSAWNPCSAFVVVAPVSGYYAPVPFFGGYVGGFLGALAFHLCRYL YNFPATFEGPENFGGNWNCAGKHCFPLPE* back to topmRNA from alignment at Contig_170:27036..40490- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_15238 ID=mRNA_15238|Name=jgi.p|Trimin1|353554|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=13455bp|location=Sequence derived from alignment at Contig_170:27036..40490- (Tribonema minus UTEX_B_3156 ) ATGGACGTAGAGCTGACCGACGAGGATCTGCAGAAGCTATATGCGTGGGT
GGACGAAATACCACTAAGCAGGCCCAAGAGGAACATCGCTAGAGACTTCA
GCGATGGTGTATTGACAGCGGAGGTGAGGAAGCTCGGTGCGCCACAGTGT
GCGACGTTCATGATGCATGTGACTTTCGTTATACTCGACATGGTCATCGG
CAGCTGCTTCAGAATTCATTAGCAGCCATGCAGCTTCGTACAAGGCAGAT
TGGCAATGCGGATGCACACACTAACTTCGTCAGGATCACGCACGCTGCAC
ATTGTCATCCTTGAGGTATGGGAAGGATGCTGCTCAAACCTGCACACTTA
ACTGATGCTGCGTGTTCATCGGAGCACCTTCTCAGCAGCGCTATGTAGTA
CCAGGTGGGGCTGCCGTCATCATCGCGCCACGCTGGTCCCTCGTGGCCAC
CTTTTTTCGCAGCGCGACGCTGCGCGCGCCCTGCTCCTATTGCCATATTG
CCATATGTTGCCCGCATCATAACTGCCGCCGATGCAAAGCTGGCGAGGAG
TGCAACGTCAGGAGCGCTGCTCAACTGACGATGCCTCGGCGCGATCGCCT
GTGCAGGTGGTGGCGCACTACTTCCCGCGCCTCGTGGAGCTGCACAACTA
CTCCGCCGCCAACAGCGTCGCGCAGAAGCTCTACAACTGGGGCACGCTCA
ACACGAAGGTGTTCCGGCGGCTGGCGTTCCAGCTGCAGCAGCCGGACATA
GAGGCGCTCGCGCAGTGTAAGCCAGGTGCGCAGCGGGGCGTTGGGGCGTC
TGAACAGTGGCTCGCACGGCGCTACCATCATCTTGTGAGAGGTCACCAAA
TGACTGCGTTATTGCCTACAGAATGTGCAGTGTACAGAGCCGTGATGGTC
AGTTGAGCGCTGTCACCCCGCCTCTGACGAACTGATGGTCGCTGCTGCTC
CTGCTGCTGCGAGGACACACTACCTGCAACAAACAACAGCGGTGCACTGG
CATCGAGGACTGACCAGTTTTGGCCATGCCAAGTGATCGTCATTTATCAT
GATGGTTTATGGTGATCAATATTGGGGCAGCGTGCGAGCTCATCGTATCG
TTGCCGTGTTTTGGCGCACAGTCACGTGCCGCTTCGTTCCGGGTGCGGAA
GCAGCACCCACTGCAGGCGCCGAGGCATAAAGTTGCAACATTAGCGCTCC
GCGTAGACAACGCAGTACGTACCGGCGCCAAGGCTTACCATTGCGGCAGC
ACGAATGGCTGTGGCGACATGGCGGACTGCGCAAGCCGGGACTGCTCGCC
TAACGCGCTCACCACCGGGTACGTCCTCACGCACACTGAGAGCGCCGCGT
ATGGGGCTATGTAGTGCCGTGGCTCAGACACGCAAGCGCGCAATGGAAAA
CTGCGCCTCGCCGCAAGCAGCAGCAGCCGCGGCGCATCGCCTCAACTAAC
ACAGGACCGTGCCCCCGGTCCGTGACATTGACGTTGATCGACAAATGTAA
CCGTCATGGTGGTCATCTGATTTTCTCTGCGGTGGCCGTTCGACGGCGCA
GGCGCGGTGGAGAAGCTCCTGTACGAGCTGCAGCTGCGCATGGCCAACTA
CCGCGCGAAGCAGCGCAGGGCGTCGGCGACGTCCGCGCAGAGCGGCGAGA
GCGAGAACGGCCAGGTGAGTGGCACTGCGCGCTGTCGCTGCGGCATCTGC
TAGTAGGCTTGGCGCTTGCCGCCGTGTTGCTGGCAGAGCTACTGCTGAGT
CTGCGTGAGGATAACGGGATACTTTGAGCTGCGGTATCTGCTGGTAGGCT
CGGTGGCTGCCGCCGCGTCGCTGGCAGCGTCGCCGCTGAGTTCGTGTGAG
GGCACCGGGACACTTTGGAATTTGTGCCTCATGCGGCCGTTGCTGCAGAT
CGGCTGTGGCGCTGTTGAGCACGGTCTCCACTGCAACGCATCAACAAGTG
CGCTTGGCCCCTCTTTCTTGTTCTGTATGTCGCGAATGCCAGGCGATCGA
TTGTGCAATGCAATTATGCAGATTTACACGCATGCTGCCATACACGACAC
CACTTCTGGAGGTGTGCAGACGCGCTGTGCAGCTCTGCGCAGCGGCGCCC
CCTACTTCTTCAATCAGGCCGCAATGCTTGATCCTGCCCGTGACCGCCGC
ATGCAGCGACGTGCATACCCTTCTTTGTGCGCTGCGACCTAAACTATCCT
GTAGCGCTGCGGCGCATGGCATGGCACATGAACTGGCCGCTGAATTTCAC
CTACACAATGAGCTTCACCGCGAAATGCTGATGTCGCATCGCCCCCTGCC
CCCCCTCCTTTCAGGACACGTCGCAGACCGGCGAGGACAGCTCGGACAGG
GGCGGCGGCGGCAGCGCGGCAGGACGGTCCGCCCCAGGCCCAAATTTGCG
CGGCGTGGTGACGATTTTGGAGCAGAAGGTGGCGCGGCTCGAGCAGCTCG
TACACATGAAGGACCTCAAGATCGCGCGCCTCGAGGCAGCGCTGCAGGCG
GCGGAGGACGCGCTGGACGGGGAGCGGCGCGCGCGCGAGCGGCTGCAGCA
GCAGCAGCAGCAGCAGGCGCCGCAGCAGCAGCACGGCCATGCGTACCAGG
CGCAGTACCAGCAGCAGCGGCAGCAGCAGCGGCAGGAGTACGATGACCAG
CAGCTGAGCGCTGACTTTGATGAGCTGCAGCTGCAGCGAGGCGGCGGCGG
CGCGGCGCCGGTGCGGCGGATGTCGGGCAGGGTGGGCCGCACGTCATGAC
CTCGTGCACCGCGCTGCTGCCGCGCGCGCGCGGCAGGACAGCATGTACGT
AATAGTGGCACAAAGAGCGCCTGCAGCGGGCGGCGGCAGCTGACGCACGT
GTCAGCGGGCAGCGCTTGCACGCATCGTCCACAATGCTCAGTAGGGATGG
TCCGCACGGTGATGGCGAGACTGCTGTTCGGCAGGCGTCTGACGCGCTGA
CCGCGTGCGCTGCCGTTCGGCGTGGCGGCGCCTCTGTTGTCTGCGAAGGC
TGCCCACGCGGTGCCGCTGCTGGTGCTGGTGGGGAGACTCAGAAGCTGAG
TCTCTGCTGCAGAGGCGGAGGTACTCACGCCGACAATGATTGCGTCTTGG
GGCGCATTCCATTTGATTAGACGCTGGCGCGCGCCAGGAAACACACTCGC
AATATAGACATTGCAATTAGAGCATTGATTCATGAGTGTTTTTCATAGTG
ATTGGCAAATTTGTCGTGCTTGATCTGCAGTGTCCCCACAACCAGCTGGC
AATGAGGAATGTGTCCACTCGGGACTCCACTGCAATCTGGTGTGCTGCCA
AGCAACCAGATTGTTCTGTGATATTTGCAGGGCTCGGCAATGCCAGCTCT
CTTCAATGCACGCTCTCTCGATTGCGGCAGGGTGCACACGCATGTGATCA
GTCATCATTCAGCGCACGTCATCATTCATCGGAGCATTACAATTCATTTG
CCATTTGCATTCATCTAGCCACAGGGACAATGGAATGGCGCATTGCAACG
GAAATGGAGGACATGCAATCTCTGCTCCAGCATCTTGCAGCAAGTATGTA
TCCACCTTCTGCTTTGAAATACAGCAGTCATTTGATGAAATGTCACCATT
GAAACTTCAAACGTGAGCTGGAGATCTTGAAGTAACACTTGAACTTTGTG
ATGAGCAGAGAAACACAGAGACAGGCCGGGCGCAGTGAGTGCGCGTCAAG
CAGGCGCCATGGCTACGATCGCAACCACGTTGACGTACACTTTTACTCAG
CGATGGATCAGCGAGATGCTGGCTATGCTGGTTGTGATCACCATTGGAGA
TTGCGTGATCGCGAATGAGGTCTTGGCCCGCACCAAAGGTGGGTGACAGA
ACCACACATGCAGCTCACGATGTCAAACATTGACATTACATCTACAGGCA
AAGCTGGTCCAGCGGTTTATTACTTTGTGTCAATCGTGTCACTAGCCAAT
TGCCGAAGCAAAAGCAGCGATTTTGATATCGGCCCAGATTCGCTGATCTT
GTTGTCCGCTCTGCCACAGGCCATGCTTTGGGACTGGGGCATGTTTCGGT
GGGATTTGGCATGGCATTCTTCACTGCGATTGTCATGTTTGGCGGCATCA
GCGCAGCTTGCAATCCGGCCATGCTTCTCGCTAAGGTGAGGCACGGAAAT
AGCAAGCAGCGTGCCTGGCACACAAGCCTGGCTGTCAAATCCAGCAGCAT
CAACAGCAGCAGTAGCTACCGCATCATCACCACTAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGTTGCTGAACGACCACCACCATCAGCACCATCAGCAGC
AGCAATGGAGTTATTGCTCAAGTGCTATGTACCAGCATTTGTGATTGTCC
CATGTTCTCCAGAACTCGACACAACAGTACTCCCAAGAATGTTTCAGCGA
CACTACCACCCTCATGTCACAAACGCGCGCGCACGTCGTATTGTCGGATG
ACAACGCTGCGCCTTCGGAGCATGCGCCTGCGCATCGACCGGCAGCATTC
AATTCCCGGCACATTGGCACACTCTGGGTTCATTGAGCAGTGTCGATGGC
GCCATCCAACGCCAAGCCGTGTTGCAGGAACGCATTGATTGTGTGCAGTA
TGCACACTGGCTCTCCTGTCGAGTCACACACAGCATGGTTGCATCTTACC
ACGCCTGGTGGCTCCACTATGGCAGCGCTGCTACCGTACATGCGCATGTG
GGGTTGATGATAGAAGCAGATGAGCAGGGTTTTCATGCTTTGAGATAGAT
GCTTTTCTCAGCATGCTTGCAACTGGTGCCATAAAGTTCTTTGTGAGTTC
TGGCATCGTTGAAAGTGCGCCCTCCCCGCCACCCCTTGATCCACCTGCAT
TTTCAGGCGTTCTAACCGAATGTGGATTGCTGTGCCTGAGGCTCACCACC
AATAGTGGCTTGCAGTTCCATGAGTTGTCTGTTGCCTTCACTATCATGGC
TACAACACTTCTATCAGCTGCAGTCCTTGCTCAATGTACGCCATCAATTC
CATGAACTATTTTCATTGGCGCGATGCCCCTTCTCCTGCTCATCGCCGGC
CCATTCGCCTATGGTGATCACGACACCCCATCTTGTGTTCGCCCTGTCTG
TCAGTATCTCCCTTCTCATCAGCTGATATCACTCACTGCATCAGCCCCCC
CCCCCCCCCGCCCCCCGCCCCTGCCGCCCCCCTTGGCAGGCCTTCACAGG
CTACCTCTCCTGGCGCGATGCTCTCCTGCTGATGATCGCCGACTACATCG
GTGGGTGTTCACGCTGCGCCGCTATGACATTGTGCCCTCTTGCGAGAGCA
GCGCACTGTGTCGTCTGCAGGTGCTGCCTTGCAGCAGAATACCACGCCGC
CCACAGAACGTGCTGCTGCGTGTTCCCGGCCGTCCGCGCGCGCGTCAGCA
GTCGCCATGTCGTGCTTGAAGTCCTTCCGCTTGTGCGGCGGACTCCCCAT
GAAGCACACACAAGACACACAGCTCTTCCTTTTGTGCAATGTGTGATGCC
GTTGTGACACCCACCTTCCCCCCCTCCCCCCCCCCCCCCCCCCTGGCGCA
CGTTCCTCAGGCGCGTTCCTCGGCGGCATCCTGGTCTACCTCACGTACCT
GCCGCACTTCAGCCTCGTGCCGCCGGCGCCGCAGCGCCCGCACTGGCCGG
AGACCACGATACTGCCGCCGGAGAACGGCGGCACGCGCGCGGCGCTCATA
TCGTACGACGCGCACGGCCTCACCGGCAGCACCGCGCGCGCGCCCGTGGA
GCTGCGGCGGCGGCGCGTCGAGGTCCGTGCAACTTCAACTTTCAGTTGCA
ACTTCAACTTTCAGTTGCAACTTCAACTTTCAGTTTCAGCGCGTTAGCCA
GTGCAATCTCAACTTTCAGTTTCAGCGTCAACCAGTGCAACCTCAACTTT
CAGTTTCACCTTCAACTTTCAGTTTCAGCGTCAGTGCCCTGTGAGGTCAA
CAGTCGAGGGGGCGCATGGGGGGCATATCGTACGACGTGCGCGGCCTCAC
GGGCAGCAACGCGCGCGCGCCCGTGGAGCTGCGGCGGCGGCGCGTCGAGG
TCCGTGTAATTTCACAGTTTGAATTCAGTGTCTGTAGGAGACGAAGGGTA
GAGGGGTGTGTGCGGGCGTCATGGGGGGTAGCGGGTCGCGTTTGCGAGTA
TGAGCGGCGGTGGCGCAGCATTGCGGCGGGCGATGTGCTTGATCGCCAAG
TACGCAGCCAGTGTGCAGCTGCTGTCGCGCGACGGGCGGATGAGCTGACA
TGCGGGTCGAGGTTGACAAAACTTCAACTTGAGATGCAGCATCAGCCAGG
CCAAAGTGACAGGCCTCGTGAGGGGAAGGGCAGGGGAGGGGCGCGCGTGT
CCACACGGAACGGCAGCGCGCGCCGCCGAGCGCAGCGGTGCAGCGGCGGC
GCATTTGAGTTTCACGAAGATCAAACATATCAGCATCAGCAGTATCCGCC
AGCAGGGCTTCATGAGGCGAAGGGCAGAGGGGAGAGCGAGCGGGGGTGCA
CGGCGGCGGCGCATTTGTAAGCAGAGAATATGAGAGGGAGGGGATTGCGA
TGCGCACGGCAGGTCATTCTGAGGTCGGCAGCAGCCTTTCTCTACCAGGT
CACGCGGGTCGCTGCAAGTTCGAGCGCTCTGACGCGTTGTTGAGGCACAG
GATGGTGTTTGCGATGCCGCAGCGGGCAGCTGTGCACGCGCGTGCGGCGC
CGCGGGCCGCGATACGCGTCTCTCGCTGTGCATGGCGTTGTTGGGGAGGT
GGACGCCCCCGGAACAGGAGGGGGATGGGGCACAGTGCAGGCGATGGGGG
CGAAGGATGCACGCGCATGCGCCGGTGCGCTGCACGCACATCGGACGGGC
TGGACCGGGTCAACAGACGCTATTGAAGTGGTGGCAGACGCGTGCTCATG
AGACACAGCAATGACGGGACCCATGCGCTCGCTGCGCGGCAGTCAGCGCT
GTCGAAGGTAGCAGCGGAGCCGCGCCGCGCTGCAGCTGCCTGCTGTCGAA
CTCCAACACTACACCACATGAACGCCGCCGTGCTGCTGACCCCCCCGCCC
TCCCCCCCCCCCTTGTCCCCCCGCCTTCCCGCCCCTGCCCCCCTCCCCCC
CCCCCTCAACAGCGCAAGGGCAGCGTAGAGATGCTGGACATCGCCGAGTC
CGTGCGCCGCAGCCGCAGCTCCTTCAACGGTCTGAGCTCCGTCGAGGAGC
GCGGCGGCAGCTACGCGCCGTCGGCTGACATCGGGCGGCCGGCCTACGCG
GAACCCACGGCAGCGCCGCCGCCACCGCCGCAGATAGGCAACGGCCAGAA
GAGCGAGGTGCGTGCAGACATTGTGGTCATGTAGTCCACTTCGTCTTGAA
GTTTTAGTACAGCGCGTGGCAGCGCAGCGCCGCTGCCGCCGCCGCAGATA
GGCAGCGGCCAGAAGGGCGAGGTGCGTGCCGATGTGATGTAGTGGAGCGC
ACAGCAGCGCAGCCGATGCAGATCGAACAGCGATGCGCGTGCAGACGTTC
ATGTTGTGGTCATGATTGAAGTTTGAGTGGAGCCCACGGCAGCGCCGCCG
CCGCCGCCGCGGATAGGCAACGGCCAGAAGAGCGAGTGGAGGAGTGCAGG
CGTGTGAACGCTGGTGATCAGGTGTTTTGGCACCGGCACGCGGCGGTGCA
GCATCGGCAGCAGCGGCAACGGTCTTCAACCAAGTCTGCGTGGTGAGCGG
GCGGGGTGGGCGATGCGCCGGAGCGCGCAGCTGCTGTGCGCAGGCGTGCG
CGTGCGCCCTGCGGCGCCGCCGTGCGCCTCAGTGCTCAACCATGCGCGAG
GCGTCAGCGGCTCAATGCTCAGCGCATGGCGATGCGTCCGGAGTGTGGCG
CGCAACGCATCCAATGCTCTCGCAGCGGGCGCGGCGGCGGCGGCGCGTTC
GGGGCGTGCCCAGCCATGCTGCGCAGACTCCAGGGACGTAGGGGTAGGGC
CAGTGTTCGGGCTAAGGATAAGCCGCTGCAGAGACTCCAGGGACGCTGCG
ACCGATGCGCCGTCGTCGTTTGCATCCTGTGTGGAAAGGCGTGGGTGCGC
GTTCCTTGCGCGTGTGACCACGCAGCAGGGATAGGGTTAGGTTTAGGGGT
GAGGGGTAGCGTCGGGCTGGGCTTTTGCGCACTCATCACGCAGCTCCGTT
GCTGCGACGCGCCTGTGGGTGCGATCGCTGATCCCCTGTGAGAGGGGGTT
TGATGAATAGGAGCAGGGCTTGCATCACCGTACTCGTTAGCGTTCACATA
TCGTCACGACCATGGGAGGAGGGGTCAAGGAATAGGGGTAGCACAACGGT
GAGACGGAAGACGTCTCTCGCGCAGTGTGAACTGAACATTGCGTGACAGT
GAACACAATATAATGTTAGTGGTCTCAATTGCCGCAATCACGTCGCCTGA
TTCGGTCACAATAGTGCCTTGGCAACATTGTCAGAAGTGATCGTCGATGC
GCTTTGAGACACTTTCAGGTTTCCACACAACATATCACGAGAATTCTGGT
AGGAGGCTGGACATCTGCCGCCTGGGCTTCTTTGTGCCCTCAGCGACAAT
CACTACATCAGCTTTGACCCCCTGGACCGTGTTGCGCGTTCCGATCGCGC
CAGGCGGCGGGGTGCGGCAAGCTGCTGCGCGAGCTCAAGGCGATCGTTGA
AGTTCACCTGCACCCCGGCGACATACTTCAAGTGGAGCGCAGCGACGGCG
GGTGAGCAAGCTTGTCCCCTGCCTTTCGGCACCGCCTCACGTGCCACGGC
GCGCCGAGTAGTGTTGCTTGTGCCTCGGCGGCGCCGATGATGTATATTCA
AGCCAGGCTGCTTTGGGGCTGGCAGTTGACGTTACCTTGACAGAGCATCG
CCATGCTTTGGCGCGCTCGCTTTAGCGGCGGCGGTCGCACGCACGATGTG
TTACTCGGCAAGACGGCGGAGATGCATCGCAGCGGTCACATTGTATGCGT
CTATCATCTGCTCTCATCAGCAACGTCGCCGTCATCTCTGGCCGCTTTCA
CAGCCGTTTTGCCAACAGGGCGTGCCTGTGCTCACTGCATACGGTCTGCC
CGAACGAGTATGTTCCAGAGCGTGTCTTCAAACTGGTCAGCGCCTGCCTG
TTCCCCAGGGTCTCTGCCTGTGCGCGCATGCACACGCGCCGTCACCTCAC
ACCGTTACTCTCCCCCCCTTGTCACGCGCGCAGCATGAGCACTGCCACCG
ACTACGACAAGCTGCTGGGGGAGAGCGACCAGCTGCACCGCGCGTACCTC
GCGTCCCTGCTGGCCGACCAGAACTCCAAGCTGACGTGCTTCTGCACGCG
CCCGGCGGTGTACCTGCCTGGCTTAAACTTTGTGAGTTCAACTCTGTTGA
CAGTTGTAGGTTCAACTCTTCACAACAGCTGAAGTTCACCTATTTCATGC
TAAAATGGCAGTTGTAGGTTCAATGGATAGTGCACGCTTTGGCTGCGCGC
CTTGGCTGCACGCTGTACAAGTTTGCCAAACCTTGCAGGTCATAGGGAGG
CGTCCTTCAGTAGTAGTGCTCTCAGTGTCCCTCAGTCATAGGGGGGCGTC
CTTTCAGTAGTACTCCCAGTCTCCCCCGCACTGAGGCGAGCATACGGCGG
CGGAGCATGACACCCACGTGCCCCAATTTCATACCGTAGTTGCTCCCGCG
CATAGGTTTGTGCAGTAGGCACATGCAGTAGGCTGTGTAGGCGCCATATG
TACTCCGCCGGTTCGCGCGTCGTCAGTCGGCACAAAAGCGTCGCACGCGC
GATGCGCAGCGCTGCACGCAAAAGAAACTCGCGCGATGCAGCGCCGTGTG
AATGGGGTGGGAAGCCGTGCCCTCATGCGGACGATGCGTTCGCGCTCACA
GCAGCGCTCGACGCCGGCTCGCCGTGCGCGCTTGAATCAAAACGCAACTA
CGCCTTCACGGTATGTGCTTGTGTGAACTGACCTGCCGCGCCTCTAACCC
TAACCGTAACCCTAACTTTTACCCTTGTCTGGCCCCGCCCTCACCTTGCG
CAGCTCTGCGAAGTCGTCGGCACCTTCATGCTCATCTGGACCGTCCTGAT
GCTGGAGCTGCGAGTAGAGGTGAGCGGCGCTGCACGACTCACTCATGACT
CACTCACTCGCTGCACTGACTCCTTTGAGCCGAGTCAAACTGACGGCAGC
GCACGTCGCAGCTCGCTGAGCACAGAGGGCGCGTTTGCTCTCTACCGCGA
GCGCCGCCGCTGCCCAAAAGAGAACTTTTTTGATAAAGAATTATGATTCG
CGAAAGTTGTAGAAACTACTGCTAATCACAAGGCGCTTGCCACGTGCTTT
GCGAGAGTTTACACTGGCACGACTAGGGTGAGGCCGGCGGTCACGCGTGC
TGACACGCGAGGGAGGCGTTGAGCTCGCAACTGTGTCGCCACCATAAGTC
TTGGCGCCACAGACCGCCACGACTTCCACATGTGCAGCGCGTCCTGTCGA
GCGCTTAGCACAACAGCCATGCAACAGCGCAACGGAACAGGTTATTGGCG
CTGCGCCTCTCACAGCCCGTGTGTCATCAACCAACATGGCCAGTTGGCAG
CCCATGCAGCGCTCGCCAACGGATCATCGCCGCCGCGCTGCCCACCGCTT
CTGTAGGCAGGTAGATCGATATACAGCTACCCATACATACCCATACCGCA
TAGCTGAGCGCTGCTCCGTGTGCCGCCGCGCCGCGCAGCTCCTGCCGCAA
AGCGCCAAGGACAACGGCTACCTCATCACGCAGGCCTTCCTCGTTGGCTT
CGTCGTCGTCGGCCTCATCATGGGCATGGCAGGGCCCACGGGCTACGCCG
CCAACCCCGCGCGCGACTGGGGGCCGCGCTTAGCGCACTTCGTGCTGCCC
ATCCCCAACAAGGGCTCCTCAGAGTGGTGAGTCACCGCTGCAGTTGAGGT
TTGCTGTGAAGTTGCTGTAAATCCCGCGCGTGTGACTGGGGGCCGCACTT
CGTGCTGCCCATCCCCAACAAGGGCGCCTCGGAGTGGTGAGTCACGCTGC
CGCAGTTGAGGTTTGATGTGAGTCACGCTGCCGCAGTTGAGGTTTGATGT
GAAGTTGCCGCGGTCTGCCCACTTCGCGCTGCCCATCCCCAACAAGGGCG
CCCCAGAGTGGTGAGTCACTGCTGCAGTTGAGGTTTGATGTGAAGTTGCC
GCGGTCTGCCCAGTTGTGCTGCCCATCCCCAACGAGGGCGCCTCGGAGTG
GTAAGCCCCCCCGCTGCAGTTGAGGTTTGATGTGAAGTTGCTGTGGACCC
CCGCACGCGTGACTGGGGGCCACGCTTCGCGCACATCGTGCTGCCCATCC
TCAACAAGGGCGCCTCGGAGTGGTGAGCCCCCCCGCTGCAGTTGAGGCTT
GATGATGAAGTTGCCCACTTGATGCTGCCCAACAAGGACGCCTGGCCTCC
GAGTGGTGCGTCACCGCTGCATTTTTTAAGTTGCTGTAAATCACCGCTGC
AGTTGGGCTGTGCTGTCTCCGGCGAGCGGCTCACGCGCAGGATGCGCGCG
ATGGCCTTCAAGGCGGTGCGTGTGGTGGCTCGCCGTCTCCAAGATCGCAC
TTCACGCACTCAAGGTTCAGGGGCGGAAACCCCATGAGGTGATTATTCTG
CACCACGTTGTATGCAGCACGTTTGCTCCTACTGCGCTTTTGGTGGCGCG
CGAGATGGCCTTCGCGACCTAGGCGTCTGCGCGCTGCCGCTTTCGAGGGT
GCTTGCATGAGCTGTGGCGTTGCTGTCAATCGGCGATCGGCTCCACGCAC
GGGATGCGGGAGATGGCCTATACGGCGGTGCGTGGCGACTCGATGCCTGC
AAGTTTGTCGGCAGAGACGGCAAGACCGCGGTACACTTCCTGGCCTGCCG
CGGCGACGTCAAGATCTACAGTCCGCACACTCACCACAGGAGCGCCGATT
TACTGCACAGCGGCATGGCGAACCTCGACGACCACGTATCCCTCACGGAG
CTCTTCGAGTCGACCCACGAATCGACCCACAAGTCAACCCACGAGTCGAC
CCACGAGTCGACCCACAAGTCGACGCACGAGCACTGTGGGGTTACGTGGT
CGTGGGAGTTCGCCATGCCGCCTTGCAGTACGTCGGCGCTCCTGTGGGTG
TGCGGACTGTATATCTTGACATCGCCGTGGCAGGCCGAGGAGTGGACCGC
GGTACTGTCATCTCTGCCAACGAACTTGTAGGCGACGCCGCTGGCCCCGG
TCTGGTCTCGCCCCCGCGCATGCTGAGCGTCACGGCCATGCACATCTTGA
AGAAGCGCTTGTCCGCATGGAATCCGTGCAGCGCGTTCGTGGTGGTGGCG
CCGGTTTCGGGGTCCTTGCCCTCGCGAATGACAATGAAGCACCGCGAAAG
AGGAGCACCTGAGGCGGGCGGAGGGGTATGTACCGAGTAAAAAGGCGAAT
ACGCGTCCTCTCAGTGTGCTGCACATCAAGCGGCCGTCGCTACTGGCTGC
GCGTCCATCGCACTGAATGCGCCTCCCCGCGCATGAGAAAAGTGACGCGG
CGGCAAACATTAATTACGGCGTTCCTGACGGCAAAAACATCCGGGGGAAG
AGAAGGGCATTTTTACCTGGATTTTGCTTGATTTATAATAAACGAGTAAA
ACACCAAGTAAAAACGGGAGTCTCTGAGTTGAGTTGTAATATATGGAGTT
GCTGTGAAGCCCGCGCGCGCGGTTGTGGTCCGCGGCTCAATGAGGACTGC
GCGGGGTGGCGAGTCACCGCTGCAGTTGCAGTTTGATTTTCAACCCGCTG
TGAAGCCCCCGTGGGCTCAGGCGAGCCCGCCTTCATGCTGCCCATCGCAG
ACAGGGTCTGCAGCAGAGTACCTAGCCTCCAGAAGCCTACAAAGCTGTTT
CAAGGCAAACATGCAGTGGGCGCAGCAGCAACGCGCACGAAGCGGCCACA
AGTATGCTGTGTCGTATACGTACTACCTACGCGTGGTTGCATATACCACA
CGCCAGTACCGTACCGTTTTCACTCCATCATACATACCAGCTCGCTCTGC
TCTGCCCTGCATTCGAGTGGCCTGCGCTGGAGTGAGTTGCCTGCGCTAAA
ATGAGGCAGCTCCCAGCCTGACGGTTCTTCTCAACGCTGAGCCGCTTCCC
CTTCTTGTTGCCCCCCCCCCCCCCCTCCCCCCCCCCCCCGACGGCGCAGG
TACTACGCGCCAGTGCCGTTCTTTGGCGGTTACGTGGGCGGTTTCCTGGG
CGCGCTCGCGTTCCACCTGTGCCGCTACCTCTACAACTTCCCCGCCACGT
TCGAGGGGCCCGAGAACTTTGGCGGCAACTGGAACTGCGCCGGCAAGCAC
TGCTTCCCGCTGCCAGAGTAGCGCCGGCGCTGATGCCGATGGCGCTGCAC
TACAGTACTAGCGCTCTGCTAGCGCCGAGCCCTCTTTACAGGCATCTGTG
GCATGGGCTCAGCAACTGTCAAGGGGCCCGTTGGCCCCTCCCACGAACCC
CCGCG back to topCoding sequence (CDS) from alignment at Contig_170:27036..40490- >mRNA_15238 ID=mRNA_15238|Name=jgi.p|Trimin1|353554|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2640bp|location=Sequence derived from alignment at Contig_170:27036..40490- (Tribonema minus UTEX_B_3156 ) ATGGACGTAGAGCTGACCGACGAGGATCTGCAGAAGCTATATGCGTGGGT GGACGAAATACCACTAAGCAGGCCCAAGAGGAACATCGCTAGAGACTTCA GCGATGGTGTATTGACAGCGGAGGTGGTGGCGCACTACTTCCCGCGCCTC GTGGAGCTGCACAACTACTCCGCCGCCAACAGCGTCGCGCAGAAGCTCTA CAACTGGGGCACGCTCAACACGAAGGTGTTCCGGCGGCTGGCGTTCCAGC TGCAGCAGCCGGACATAGAGGCGCTCGCGCAGTGTAAGCCAGGCGCGGTG GAGAAGCTCCTGTACGAGCTGCAGCTGCGCATGGCCAACTACCGCGCGAA GCAGCGCAGGGCGTCGGCGACGTCCGCGCAGAGCGGCGAGAGCGAGAACG GCCAGGACACGTCGCAGACCGGCGAGGACAGCTCGGACAGGGGCGGCGGC GGCAGCGCGGCAGGACGGTCCGCCCCAGGCCCAAATTTGCGCGGCGTGGT GACGATTTTGGAGCAGAAGGTGGCGCGGCTCGAGCAGCTCGTACACATGA AGGACCTCAAGATCGCGCGCCTCGAGGCAGCGCTGCAGGCGGCGGAGGAC GCGCTGGACGGGGAGCGGCGCGCGCGCGAGCGGCTGCAGCAGCAGCAGCA GCAGCAGGCGCCGCAGCAGCAGCACGGCCATGCGTACCAGGCGCAGTACC AGCAGCAGCGGCAGCAGCAGCGGCAGGAGTACGATGACCAGCAGCTGAGC GCTGACTTTGATGAGCTGCAGCTGCAGCGAGGCGGCGGCGGCGCGGCGCC GGTGCGGCGGATGTCGGGCAGGGCCTTCACAGGCTACCTCTCCTGGCGCG ATGCTCTCCTGCTGATGATCGCCGACTACATCGGCGCGTTCCTCGGCGGC ATCCTGGTCTACCTCACGTACCTGCCGCACTTCAGCCTCGTGCCGCCGGC GCCGCAGCGCCCGCACTGGCCGGAGACCACGATACTGCCGCCGGAGAACG GCGGCACGCGCGCGGCGCTCATATCGTACGACGCGCACGGCCTCACCGGC AGCACCGCGCGCGCGCCCGTGGAGCTGCGGCGGCGGCGCGTCGAGTCGAG GGGGCGCATGGGGGGCATATCGTACGACGTGCGCGGCCTCACGGGCAGCA ACGCGCGCGCGCCCGTGGAGCTGCGGCGGCGGCGCGTCGAGCGCAAGGGC AGCGTAGAGATGCTGGACATCGCCGAGTCCGTGCGCCGCAGCCGCAGCTC CTTCAACGGTCTGAGCTCCGTCGAGGAGCGCGGCGGCAGCTACGCGCCGT CGGCTGACATCGGGCGGCCGGCCTACGCGGAACCCACGGCAGCGCCGCCG CCACCGCCGCAGATAGGCAACGGCCAGAAGAGCGAGATAGGCAGCGGCCA GAAGGGCGAGGCGGCGGGGTGCGGCAAGCTGCTGCGCGAGCTCAAGGCGA TCGTTGAAGTTCACCTGCACCCCGGCGACATACTTCAAGTGGAGCGCAGC GACGGCGGCATGAGCACTGCCACCGACTACGACAAGCTGCTGGGGGAGAG CGACCAGCTGCACCGCGCGTACCTCGCGTCCCTGCTGGCCGACCAGAACT CCAAGCTGACGTGCTTCTGCACGCGCCCGGCGGTCGCTGCACGCAAAAGA AACTCGCGCGATGCAGCGCCGTGTGAATGGGGTGGGAAGCCGTGCCCTCA TGCGGACGATGCGTTCGCGCTCACAGCAGCGCTCGACGCCGGCTCGCCGT GCGCGCTTGAATCAAAACGCAACTACGCCTTCACGCTCTGCGAAGTCGTC GGCACCTTCATGCTCATCTGGACCGTCCTGATGCTGGAGCTGCGAGTAGA GCTCCTGCCGCAAAGCGCCAAGGACAACGGCTACCTCATCACGCAGGCCT TCCTCGTTGGCTTCGTCGTCGTCGGCCTCATCATGGGCATGGCAGGGCCC ACGGGCTACGCCGCCAACCCCGCGCGCGACTGGGGGCCGCGCTTAGCGCA CTTCGTGCTGCCCATCCCCAACAAGGGCTCCTCAGAGTGGATGCGCGCGA TGGCCTTCAAGGCGTTTGTCGGCAGAGACGGCAAGACCGCGGTACACTTC CTGGCCTGCCGCGGCGACGTCAAGATCTACAGTCCGCACACTCACCACAG GAGCGCCGATTTACTGCACAGCGGCATGGCGAACCTCGACGACCACGTAT CCCTCACGGAGCTCTTCGAGTCGACCCACGAATCGACCCACAAGTCAACC CACGAGTCGACCCACGAGTCGACCCACAAGTCGACGCACGAGCACTGTGG GGTTACGTGGTCGTGGGAGTTCGCCATGCCGCCTTGCAGCGACGCCGCTG GCCCCGGTCTGGTCTCGCCCCCGCGCATGCTGAGCGTCACGGCCATGCAC ATCTTGAAGAAGCGCTTGTCCGCATGGAATCCGTGCAGCGCGTTCGTGGT GGTGGCGCCGGTTTCGGGGTACTACGCGCCAGTGCCGTTCTTTGGCGGTT ACGTGGGCGGTTTCCTGGGCGCGCTCGCGTTCCACCTGTGCCGCTACCTC TACAACTTCCCCGCCACGTTCGAGGGGCCCGAGAACTTTGGCGGCAACTG GAACTGCGCCGGCAAGCACTGCTTCCCGCTGCCAGAGTAG back to top
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