mRNA_1509 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|161954
Unique NamemRNA_1509
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
[Close]
BLAST of jgi.p|Trimin1|161954 vs. uniprot
Match: A0A835Z5Q4_9STRA (Ribonuclease n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5Q4_9STRA)

HSP 1 Score: 385 bits (988), Expect = 3.270e-135
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 1 
Query:    1 MVEVGVDEVGRGCLFGSVVAAAVALPETFPDDGWTSIKDSKKLSPRKRALLDSYIRMHAIACGIGIAMPHEIDEQNILQATMLAMHRALDQVSTQVQISSITVDGNYFKVYHEVPFECVVKGDTKVLSIAAASIIAKVFRDNMMKTLVTDNPDLQTYGIGTNMGYPTQAHIEAIRQHGLTDQHRKSFVVKSLL 579
            MVEVGVDEVGRGCLFGSVVAAAVALPETFPDDGWTSIKDSKKLSPRKRALLDSYIRMHAIACGIGIAMPHEIDEQNILQATMLAMHRALDQVSTQVQISSITVDGNYFKVYHEVPFECVVKGDTKVLSIAAASIIAKVFRDNMMKTLVTDNPDLQTYGIGTNMGYPTQAHIEAIRQHGLTDQHRKSFVVKSLL
Sbjct:    1 MVEVGVDEVGRGCLFGSVVAAAVALPETFPDDGWTSIKDSKKLSPRKRALLDSYIRMHAIACGIGIAMPHEIDEQNILQATMLAMHRALDQVSTQVQISSITVDGNYFKVYHEVPFECVVKGDTKVLSIAAASIIAKVFRDNMMKTLVTDNPDLQTYGIGTNMGYPTQAHIEAIRQHGLTDQHRKSFVVKSLL 193
[Close]
BLAST of jgi.p|Trimin1|161954 vs. uniprot
Match: A0A836CBR9_9STRA (Ribonuclease n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBR9_9STRA)

HSP 1 Score: 245 bits (625), Expect = 5.890e-80
Identity = 125/190 (65.79%), Postives = 144/190 (75.79%), Query Frame = 1 
Query:    7 EVGVDEVGRGCLFGSVVAAAVALPETFPDDGWTSIKDSKKLSPRKRALLDSYIRMHAIACGIGIAMPHEIDEQNILQATMLAMHRALDQVSTQVQISSITVDGNYFKVYHEVPFECVVKGDTKVLSIAAASIIAKVFRDNMMKTLVTDNPDLQTYGIGTNMGYPTQAHIEAIRQHGLTDQHRKSFVVKSL 576
            +VGVDEVGRGCL G V AAAV LP T+PD+GW  IKDSKKLS +KR  + +YI+ +A+A GIG A   EIDE NILQA MLAMHRALDQV+  +   SI VDG YF  Y +VP EC+VKGD+ +LSIAAASIIAK FRDN M+ LV + PDL  Y I  NMGY T AHIE IR+HG+TD HRKSF VKSL
Sbjct:    2 QVGVDEVGRGCLLGFVAAAAVILPSTYPDEGWMGIKDSKKLSAKKREQMATYIKNNALAYGIGTASVQEIDEHNILQAVMLAMHRALDQVA--IPFESIAVDGTYFNPYRDVPHECIVKGDSTILSIAAASIIAKEFRDNAMRELVHELPDLAVYDICNNMGYGTPAHIEGIRRHGITDHHRKSFKVKSL 189
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BLAST of jgi.p|Trimin1|161954 vs. uniprot
Match: A0A835ZCH7_9STRA (Ribonuclease n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCH7_9STRA)

HSP 1 Score: 209 bits (533), Expect = 6.250e-66
Identity = 105/184 (57.07%), Postives = 129/184 (70.11%), Query Frame = 1 
Query:   10 VGVDEVGRGCLFGSVVAAAVALPETFPDDGWTSIKDSKKLSPRKRALLDSYIRMHAIACGIGIAMPHEIDEQNILQATMLAMHRALDQVSTQVQISSITVDGNYFKVYHEVPFECVVKGDTKVLSIAAASIIAKVFRDNMMKTLVTDNPDLQTYGIGTNMGYPTQAHIEAIRQHGLTDQHRKSF 561
            VGVDEVGRGCL+G V AAA+ LPETFPD+G+  IKDSKKLS +KRA +D YI+ HAIA  +G A   EID  NI  AT LAMHRAL+Q+  Q  I+ I VDGN F  Y     EC+V GD    SI+AASI+AKV+RD +M+  V  +P L  Y +  N GY T+ H++AI QHG+T+ HRKSF
Sbjct:    4 VGVDEVGRGCLYGCVTAAAMVLPETFPDEGYKDIKDSKKLSAKKRAKMDLYIKEHAIAYAVGSASAAEIDALNIQNATFLAMHRALEQIEQQTSIAKIMVDGNRFLKYKHYEHECIVGGDAVYKSISAASILAKVYRDTLMEERVKADPRLNVYELAKNKGYGTKTHMDAIAQHGITEDHRKSF 187
[Close]
BLAST of jgi.p|Trimin1|161954 vs. uniprot
Match: A0A6C0LGQ7_9ZZZZ (Ribonuclease HII n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0LGQ7_9ZZZZ)

HSP 1 Score: 185 bits (469), Expect = 5.800e-56
Identity = 103/194 (53.09%), Postives = 132/194 (68.04%), Query Frame = 1 
Query:    1 MVEVGVDEVGRGCLFGSVVAAAVALPETFPDDG-WTSIKDSKKLSPRKRALLDSYIRMHAIACGIGIAMPHEIDEQNILQATMLAMHRALDQVSTQVQISSITVDGNYFKVY-----HEVPFECVVKGDTKVLSIAAASIIAKVFRDNMMKTLVTDNPDLQTYGIGTNMGYPTQAHIEAIRQHGLTDQ-HRKSF 561
            +  +GVDEVGRG LFG+VVAAAV +P+   DD  +  IKDSKKLS +KR +L +YI+  AI  GIGIA P EIDE NIL A + AMHRAL Q   + + ++I VDGNYFK         + +EC+ +GDTK ++IAAASIIAK F DN +  LV +NPDL  Y +  NMGY T  H  AI++HG+ +  HRK+F
Sbjct:    7 LTTIGVDEVGRGTLFGNVVAAAVIMPDNLDDDELYKQIKDSKKLSFKKRTILANYIKEKAITYGIGIATPKEIDEINILHAAIKAMHRALFQAYKKHKFTNIIVDGNYFKPIICSEDETIDYECIPQGDTKYINIAAASIIAKDFHDNEIIELVKENPDLNKYDLLKNMGYATLNHRVAIKKHGIDNNYHRKTF 200
[Close]
BLAST of jgi.p|Trimin1|161954 vs. uniprot
Match: A0A6G6XQ99_9VIRU (Ribonuclease HII n=1 Tax=Dishui Lake large algae virus 1 TaxID=2704073 RepID=A0A6G6XQ99_9VIRU)

HSP 1 Score: 183 bits (465), Expect = 2.990e-55
Identity = 103/202 (50.99%), Postives = 125/202 (61.88%), Query Frame = 1 
Query:    1 MVEVGVDEVGRGCLFGSVVAAAVALP--ETFPDDGWTSIKDSKKLSPRKRALLDSYIRMHAIACGIGIAMPHEIDEQNILQATMLAMHRALDQVSTQVQISSITVDGNYFKVY-------HEVPFECVVKGDTKVLSIAAASIIAKVFRDNMMKTLVTDNPDLQTYGIGTNMGYPTQAHIEAIRQHGLTDQHRKSFVVKSLL 579
            M+  GVDE GRG L G VVAAAV LP  + FPDD + SIKDSKKLS +KR +L  YIR HAI  GIG+A P EID+ NIL ATM AM RAL     +     I VDG +F  Y         +  EC+V GD    +I AASI+AK   D +++ L+  NPD + YG+  NMGY T  HI A+RQ+G T  HR+SF   SLL
Sbjct:   19 MLVAGVDEAGRGPLIGPVVAAAVVLPSDDKFPDDMYLSIKDSKKLSIKKREVLADYIRKHAITYGIGVASPQEIDQINILHATMRAMERALTDAYKKQPFHHIMVDGQHFTTYIPPGIDSDALTHECIVDGDNIHRNIGAASILAKTHHDMLIRELIEQNPDYEKYGLKKNMGYGTAEHIRALRQYGATPHHRRSFKPVSLL 220
[Close]
BLAST of jgi.p|Trimin1|161954 vs. uniprot
Match: I0TB37_9BACT (Ribonuclease HII n=3 Tax=Prevotella TaxID=838 RepID=I0TB37_9BACT)

HSP 1 Score: 182 bits (463), Expect = 3.240e-55
Identity = 99/187 (52.94%), Postives = 127/187 (67.91%), Query Frame = 1 
Query:    1 MVEVGVDEVGRGCLFGSVVAAAVALPETFPDDGWTSIKDSKKLSPRKRALLDSYIRMHAIACGIGIAMPHEIDEQNILQATMLAMHRALDQVSTQVQISSITVDGNYFKVYHEVPFECVVKGDTKVLSIAAASIIAKVFRDNMMKTLVTDNPDLQTYGIGTNMGYPTQAHIEAIRQHGLTDQHRKSF 561
            +VE G DE GRGCL GSV A AV LPE + +D    + DSKKLS +KR +L   I   A+A  +GI  P EID+ NIL A+ LAMHRALDQ+ T  +  +I +DGN FK Y ++PF  +VKGD K LSIAAASI+AK +RD+ M +L  + P    Y   +NMGYPT+ H EAIR++G+T  HRKS+
Sbjct:   10 LVEAGCDEAGRGCLAGSVYATAVILPENYEND---MLNDSKKLSAKKRYVLREIIERDALAWAVGIVTPEEIDKINILNASFLAMHRALDQLGTHPE--AIIIDGNRFKPYRDLPFTTIVKGDGKYLSIAAASILAKTYRDDYMLSLAKEYPQ---YDWQSNMGYPTKKHREAIRKYGITPFHRKSY 188
[Close]
BLAST of jgi.p|Trimin1|161954 vs. uniprot
Match: G1VBF3_9BACT (Ribonuclease HII n=4 Tax=Prevotella TaxID=838 RepID=G1VBF3_9BACT)

HSP 1 Score: 182 bits (462), Expect = 4.590e-55
Identity = 99/187 (52.94%), Postives = 128/187 (68.45%), Query Frame = 1 
Query:    1 MVEVGVDEVGRGCLFGSVVAAAVALPETFPDDGWTSIKDSKKLSPRKRALLDSYIRMHAIACGIGIAMPHEIDEQNILQATMLAMHRALDQVSTQVQISSITVDGNYFKVYHEVPFECVVKGDTKVLSIAAASIIAKVFRDNMMKTLVTDNPDLQTYGIGTNMGYPTQAHIEAIRQHGLTDQHRKSF 561
            +VEVG DE GRGCL GSV AAAV LP  + ++    + DSKKLS +KR  L + I   A+A  +G+  P EID+ NIL A+ LAMHRALDQ+  +V+  ++ VDGN FK Y E+PF  +VKGD K LSIAAASI+AK +RD+ M+ L  + P    Y   +NMGYPT+ H +AI +HG+T  HRKSF
Sbjct:   10 LVEVGCDEAGRGCLAGSVYAAAVILPPDYENE---LLNDSKKLSAKKRYTLRAEIERDAVAWAVGVVTPEEIDKINILNASFLAMHRALDQL--KVRPEAVIVDGNRFKPYQELPFTTIVKGDGKYLSIAAASILAKTYRDDYMQALAKEYPQ---YDWQSNMGYPTKKHRQAISEHGVTPYHRKSF 188
[Close]
BLAST of jgi.p|Trimin1|161954 vs. uniprot
Match: A0A2D9GDN0_9FLAO (Ribonuclease HII n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A2D9GDN0_9FLAO)

HSP 1 Score: 182 bits (461), Expect = 5.920e-55
Identity = 95/186 (51.08%), Postives = 127/186 (68.28%), Query Frame = 1 
Query:    4 VEVGVDEVGRGCLFGSVVAAAVALPETFPDDGWTSIKDSKKLSPRKRALLDSYIRMHAIACGIGIAMPHEIDEQNILQATMLAMHRALDQVSTQVQISSITVDGNYFKVYHEVPFECVVKGDTKVLSIAAASIIAKVFRDNMMKTLVTDNPDLQTYGIGTNMGYPTQAHIEAIRQHGLTDQHRKSF 561
            +EVG DE GRGCL G VVAAAV LPE F +    ++ DSKKL+ ++R  L+ +I+  A++ GIGI  P EIDE NIL+A+ LAMHRA+D ++++ Q+  + +DGN F  Y  +  EC++KGD K LSIAAAS++AK  RD +MK L  + P    Y  G N GYPT+ H EAI++HG    HRKSF
Sbjct:   10 IEVGCDEAGRGCLAGPVVAAAVLLPENFKNQ---TLNDSKKLNEKQREKLEIFIKKEAVSYGIGIVSPKEIDEINILKASFLAMHRAIDAINSEYQL--LLIDGNRFNPYKNITHECIIKGDGKFLSIAAASVLAKTERDRIMKNLSLEFPQ---YHWGKNKGYPTKKHREAIQKHGANKYHRKSF 187
[Close]
BLAST of jgi.p|Trimin1|161954 vs. uniprot
Match: A0A3D5S032_9BACT (Ribonuclease HII n=3 Tax=Bacteria TaxID=2 RepID=A0A3D5S032_9BACT)

HSP 1 Score: 182 bits (461), Expect = 6.110e-55
Identity = 98/187 (52.41%), Postives = 127/187 (67.91%), Query Frame = 1 
Query:    1 MVEVGVDEVGRGCLFGSVVAAAVALPETFPDDGWTSIKDSKKLSPRKRALLDSYIRMHAIACGIGIAMPHEIDEQNILQATMLAMHRALDQVSTQVQISSITVDGNYFKVYHEVPFECVVKGDTKVLSIAAASIIAKVFRDNMMKTLVTDNPDLQTYGIGTNMGYPTQAHIEAIRQHGLTDQHRKSF 561
            ++E G DE GRGCL G VVAAAV LP+ F  +    + DSK+L+ ++R  L   I+ HAIA GIGIA P EIDE NIL A+ LAMHRA+D + +  ++  + +DGN FK  H++PFEC+VKGD K  SIAAASI+AK +RD +MK L  + P    Y   TN GYPTQAH +AI+  G+T  HR +F
Sbjct:   10 LIEAGCDEAGRGCLAGPVVAAAVILPKDFSHE---VLNDSKQLTEKQRMELKDEIKEHAIAYGIGIASPKEIDEINILNASYLAMHRAVDDLKSVPEM--LLIDGNRFKPKHDIPFECIVKGDGKYYSIAAASILAKTYRDELMKNLSEEFPG---YSWETNYGYPTQAHRKAIKAQGVTPHHRMTF 188
[Close]
BLAST of jgi.p|Trimin1|161954 vs. uniprot
Match: R5KE81_9BACT (Ribonuclease HII n=2 Tax=Prevotellaceae TaxID=171552 RepID=R5KE81_9BACT)

HSP 1 Score: 181 bits (458), Expect = 1.540e-54
Identity = 99/187 (52.94%), Postives = 127/187 (67.91%), Query Frame = 1 
Query:    1 MVEVGVDEVGRGCLFGSVVAAAVALPETFPDDGWTSIKDSKKLSPRKRALLDSYIRMHAIACGIGIAMPHEIDEQNILQATMLAMHRALDQVSTQVQISSITVDGNYFKVYHEVPFECVVKGDTKVLSIAAASIIAKVFRDNMMKTLVTDNPDLQTYGIGTNMGYPTQAHIEAIRQHGLTDQHRKSF 561
            +VE G DE GRGCL GSV AAAV LPE + ++G   + DSKKL+P +R  L   I   A+A  +G+  P EID+ NIL A++LAMHRALDQ+  +V+  +I VDGN FK Y  +P+  VVKGD K LSIAAASI+AK +RD+ M +L  + P    Y    N GYPT+AH EAI ++G+T  HRKSF
Sbjct:   10 LVEAGCDEAGRGCLAGSVFAAAVILPEDYVNEG---LNDSKKLTPMRRYELRDEIERDALAWAVGVVTPEEIDKINILNASILAMHRALDQL--EVRPEAIIVDGNRFKPYRFIPYNTVVKGDGKYLSIAAASILAKTYRDDYMDSLAREYPQ---YAWDVNKGYPTKAHREAIAKYGITPYHRKSF 188
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|161954 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z5Q4_9STRA3.270e-135100.00Ribonuclease n=2 Tax=Tribonema minus TaxID=303371 ... [more]
A0A836CBR9_9STRA5.890e-8065.79Ribonuclease n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A835ZCH7_9STRA6.250e-6657.07Ribonuclease n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A6C0LGQ7_9ZZZZ5.800e-5653.09Ribonuclease HII n=1 Tax=viral metagenome TaxID=10... [more]
A0A6G6XQ99_9VIRU2.990e-5550.99Ribonuclease HII n=1 Tax=Dishui Lake large algae v... [more]
I0TB37_9BACT3.240e-5552.94Ribonuclease HII n=3 Tax=Prevotella TaxID=838 RepI... [more]
G1VBF3_9BACT4.590e-5552.94Ribonuclease HII n=4 Tax=Prevotella TaxID=838 RepI... [more]
A0A2D9GDN0_9FLAO5.920e-5551.08Ribonuclease HII n=1 Tax=Flavobacteriales bacteriu... [more]
A0A3D5S032_9BACT6.110e-5552.41Ribonuclease HII n=3 Tax=Bacteria TaxID=2 RepID=A0... [more]
R5KE81_9BACT1.540e-5452.94Ribonuclease HII n=2 Tax=Prevotellaceae TaxID=1715... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_18contigContig_18:1274793..1275374 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|161954|e_gw1.18.171.1
BRITEko00000,ko00001,ko01000,ko03032
KEGG Pathwayko03030,map03030
KEGG koko:K03470
EC3.1.26.4
GOsGO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576
Preferred namernhB
DescriptionEndonuclease that specifically degrades the RNA of RNA- DNA hybrids
COG categoryL
Max annot lvl976|Bacteroidetes
EggNOG OGsCOG0164@1|root,COG0164@2|Bacteria,4NGVR@976|Bacteroidetes,2FMS7@200643|Bacteroidia
Evalue5.31e-56
Seed ortholog1095752.HMPREF9969_1008
Hectar predicted targeting categoryother localisation
TranscriptId162276
TrackFilteredModels1
ProteinId161954
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|161954gene_1509Tribonema minus UTEX_B_3156 geneContig_18 1274793..1275374 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_1509_1exon_1509_1Tribonema minus UTEX_B_3156 exonContig_18 1274793..1275374 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_1509CDS_1509Tribonema minus UTEX_B_3156 CDSContig_18 1274793..1275374 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|161954Trimin1|161954|e_gw1.18.171.1Tribonema minus UTEX_B_3156 polypeptideContig_18 1274793..1275374 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_1509 ID=mRNA_1509|Name=jgi.p|Trimin1|161954|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=582bp|location=Sequence derived from alignment at Contig_18:1274793..1275374- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGTAGAGGTCGGCGTTGATGAGGTTGGCCGTGGATGCCTGTTTGGCTC
AGTGGTGGCTGCTGCAGTCGCCTTACCTGAAACGTTCCCAGATGATGGCT
GGACCAGCATCAAGGACTCCAAGAAGTTGAGCCCCAGGAAGCGAGCGTTG
TTGGACAGCTACATTCGAATGCACGCCATAGCTTGCGGCATTGGCATAGC
GATGCCACACGAAATTGATGAGCAAAACATTTTACAGGCCACAATGCTGG
CCATGCACCGCGCTCTCGATCAAGTGAGCACTCAGGTGCAGATCAGTTCG
ATAACAGTAGATGGAAATTATTTCAAAGTGTATCATGAGGTGCCTTTTGA
GTGCGTTGTAAAAGGCGATACCAAGGTCCTCAGCATAGCAGCGGCATCAA
TCATCGCCAAGGTGTTTCGCGATAACATGATGAAGACGCTGGTGACCGAT
AACCCTGATCTTCAGACATATGGCATAGGAACCAACATGGGCTATCCAAC
GCAAGCTCACATCGAGGCCATTCGCCAACACGGGCTCACAGACCAGCACC
GCAAATCTTTTGTTGTGAAGAGCTTACTGTAA
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protein sequence of jgi.p|Trimin1|161954

>Trimin1|161954|e_gw1.18.171.1 ID=Trimin1|161954|e_gw1.18.171.1|Name=jgi.p|Trimin1|161954|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=194bp
MVEVGVDEVGRGCLFGSVVAAAVALPETFPDDGWTSIKDSKKLSPRKRAL
LDSYIRMHAIACGIGIAMPHEIDEQNILQATMLAMHRALDQVSTQVQISS
ITVDGNYFKVYHEVPFECVVKGDTKVLSIAAASIIAKVFRDNMMKTLVTD
NPDLQTYGIGTNMGYPTQAHIEAIRQHGLTDQHRKSFVVKSLL*
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mRNA from alignment at Contig_18:1274793..1275374-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_1509 ID=mRNA_1509|Name=jgi.p|Trimin1|161954|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=582bp|location=Sequence derived from alignment at Contig_18:1274793..1275374- (Tribonema minus UTEX_B_3156 )
ATGGTAGAGGTCGGCGTTGATGAGGTTGGCCGTGGATGCCTGTTTGGCTC
AGTGGTGGCTGCTGCAGTCGCCTTACCTGAAACGTTCCCAGATGATGGCT
GGACCAGCATCAAGGACTCCAAGAAGTTGAGCCCCAGGAAGCGAGCGTTG
TTGGACAGCTACATTCGAATGCACGCCATAGCTTGCGGCATTGGCATAGC
GATGCCACACGAAATTGATGAGCAAAACATTTTACAGGCCACAATGCTGG
CCATGCACCGCGCTCTCGATCAAGTGAGCACTCAGGTGCAGATCAGTTCG
ATAACAGTAGATGGAAATTATTTCAAAGTGTATCATGAGGTGCCTTTTGA
GTGCGTTGTAAAAGGCGATACCAAGGTCCTCAGCATAGCAGCGGCATCAA
TCATCGCCAAGGTGTTTCGCGATAACATGATGAAGACGCTGGTGACCGAT
AACCCTGATCTTCAGACATATGGCATAGGAACCAACATGGGCTATCCAAC
GCAAGCTCACATCGAGGCCATTCGCCAACACGGGCTCACAGACCAGCACC
GCAAATCTTTTGTTGTGAAGAGCTTACTGTAA
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Coding sequence (CDS) from alignment at Contig_18:1274793..1275374-

>mRNA_1509 ID=mRNA_1509|Name=jgi.p|Trimin1|161954|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=582bp|location=Sequence derived from alignment at Contig_18:1274793..1275374- (Tribonema minus UTEX_B_3156 )
ATGGTAGAGGTCGGCGTTGATGAGGTTGGCCGTGGATGCCTGTTTGGCTC
AGTGGTGGCTGCTGCAGTCGCCTTACCTGAAACGTTCCCAGATGATGGCT
GGACCAGCATCAAGGACTCCAAGAAGTTGAGCCCCAGGAAGCGAGCGTTG
TTGGACAGCTACATTCGAATGCACGCCATAGCTTGCGGCATTGGCATAGC
GATGCCACACGAAATTGATGAGCAAAACATTTTACAGGCCACAATGCTGG
CCATGCACCGCGCTCTCGATCAAGTGAGCACTCAGGTGCAGATCAGTTCG
ATAACAGTAGATGGAAATTATTTCAAAGTGTATCATGAGGTGCCTTTTGA
GTGCGTTGTAAAAGGCGATACCAAGGTCCTCAGCATAGCAGCGGCATCAA
TCATCGCCAAGGTGTTTCGCGATAACATGATGAAGACGCTGGTGACCGAT
AACCCTGATCTTCAGACATATGGCATAGGAACCAACATGGGCTATCCAAC
GCAAGCTCACATCGAGGCCATTCGCCAACACGGGCTCACAGACCAGCACC
GCAAATCTTTTGTTGTGAAGAGCTTACTGTAA
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