mRNA_15086 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|174424
Unique NamemRNA_15086
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
[Close]
BLAST of jgi.p|Trimin1|174424 vs. uniprot
Match: A0A835ZEQ0_9STRA (DNA glycosylase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEQ0_9STRA)

HSP 1 Score: 530 bits (1365), Expect = 5.110e-190
Identity = 273/273 (100.00%), Postives = 273/273 (100.00%), Query Frame = 1 
Query:    1 VQQVLDRLYPEPPMPLNHTDPFTLLCAVLLSAQTTDGKVNEVTTELFARAPTPRALAAMSHSDVLSIIRTVGLAPTKARHLIATAQQLCERFGGAVPRTMEELQTLPGVGRKTASVVMSGAFGVPAFPVDTHIHRLALRWRLSRSETNVERVEHDLRALWPPAAYGRLHLQFIYFGREYCQARNHMPSRCPVCSWADNPLPTSAPIAAARSKAHHAQQXXXXXRPQPASPDDIPQLLLESPRKLSKTSVLYGERVAELARGGAAARLIMSATV 819
            VQQVLDRLYPEPPMPLNHTDPFTLLCAVLLSAQTTDGKVNEVTTELFARAPTPRALAAMSHSDVLSIIRTVGLAPTKARHLIATAQQLCERFGGAVPRTMEELQTLPGVGRKTASVVMSGAFGVPAFPVDTHIHRLALRWRLSRSETNVERVEHDLRALWPPAAYGRLHLQFIYFGREYCQARNHMPSRCPVCSWADNPLPTSAPIAAARSKAHHAQQXXXXXRPQPASPDDIPQLLLESPRKLSKTSVLYGERVAELARGGAAARLIMSATV
Sbjct:    1 VQQVLDRLYPEPPMPLNHTDPFTLLCAVLLSAQTTDGKVNEVTTELFARAPTPRALAAMSHSDVLSIIRTVGLAPTKARHLIATAQQLCERFGGAVPRTMEELQTLPGVGRKTASVVMSGAFGVPAFPVDTHIHRLALRWRLSRSETNVERVEHDLRALWPPAAYGRLHLQFIYFGREYCQARNHMPSRCPVCSWADNPLPTSAPIAAARSKAHHAQQXXXXXRPQPASPDDIPQLLLESPRKLSKTSVLYGERVAELARGGAAARLIMSATV 273
[Close]
BLAST of jgi.p|Trimin1|174424 vs. uniprot
Match: A0A1I2BL98_9DELT (Endonuclease III n=2 Tax=Nannocystis TaxID=53 RepID=A0A1I2BL98_9DELT)

HSP 1 Score: 261 bits (666), Expect = 2.310e-84
Identity = 128/196 (65.31%), Postives = 151/196 (77.04%), Query Frame = 1 
Query:    1 VQQVLDRLYPEPPMPLNHTDPFTLLCAVLLSAQTTDGKVNEVTTELFARAPTPRALAAMSHSDVLSIIRTVGLAPTKARHLIATAQQLCERFGGAVPRTMEELQTLPGVGRKTASVVMSGAFGVPAFPVDTHIHRLALRWRLSRSETNVERVEHDLRALWPPAAYGRLHLQFIYFGREYCQARNHMPSRCPVCSWA 588
            +Q +LDRLYP+PPMPL H DPFTLL AV+LSAQTTD +VN VT ELF RAPTP A+A ++ +++L  IRT GLAP KA+++   ++ L ER GG VP  M  L+ LPGVG KTASVVM  AFGVPAFPVDTHIHRLA RW LS   T+VE+ E DL+ALWPP A+ RLHLQ IYFGRE+C AR H P  CP+CSWA
Sbjct:   10 IQAILDRLYPQPPMPLLHGDPFTLLVAVVLSAQTTDARVNLVTPELFRRAPTPEAMARLTEAEILGFIRTCGLAPAKAKNIRRLSELLLERHGGQVPNDMAALEALPGVGHKTASVVMVQAFGVPAFPVDTHIHRLAARWGLSDG-TSVEKTEADLKALWPPEAWSRLHLQIIYFGREHCPARGHDPKVCPICSWA 204
[Close]
BLAST of jgi.p|Trimin1|174424 vs. uniprot
Match: D8LEA3_ECTSI (Putative endonuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEA3_ECTSI)

HSP 1 Score: 266 bits (681), Expect = 7.220e-83
Identity = 140/256 (54.69%), Postives = 178/256 (69.53%), Query Frame = 1 
Query:    7 QVLDRLYPEPPMPLNHTDPFTLLCAVLLSAQTTDGKVNEVTTELFARAPTPRALAAMSHSDVLSIIRTVGLAPTKARHLIATAQQLCERFGGAVPRTMEELQTLPGVGRKTASVVMSGAFGVPAFPVDTHIHRLALRWRLSRSETNVERVEHDLRALWPPAAYGRLHLQFIYFGREYCQARNHMPSRCPVCSWADNPLPTSAPIAAARSKAHHAQQXXXXXRPQPASPDDIPQLLLESPRKLSKTSVLYGERVAEL 774
            Q++D+LYP+PP+P+NH D FTLLC VLLSAQTTD +VN VT ELF  AP P++L+ M+H D+   IR+VGLAPTKA+HLIA +QQ+ +RF G VP+T E LQ+LPGVGRKTA+VVM  AF  PAFPVDTHIHRLALRW L+++E N  +VE DL A++P  ++ +LHLQFIYFGRE+CQAR H  S CP+CSW     P S P A A+    +            ASP           +K SK +++Y ER  E+
Sbjct:  267 QIMDKLYPDPPIPINHMDSFTLLCGVLLSAQTTDAQVNLVTQELFRVAPNPQSLSKMAHEDLQRTIRSVGLAPTKAKHLIALSQQILDRFDGKVPQTFEGLQSLPGVGRKTAAVVMVQAFNTPAFPVDTHIHRLALRWGLTKNEKNASKVEEDLMAVFPRDSWAKLHLQFIYFGREHCQARVHDASACPICSWVKKTGPGS-PKALAQLTCLNDYL---------ASPTPT--------KKSSKNAIVYSERKLEM 504
[Close]
BLAST of jgi.p|Trimin1|174424 vs. uniprot
Match: A0A6H5JNP1_9PHAE (ENDO3c domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNP1_9PHAE)

HSP 1 Score: 267 bits (683), Expect = 1.360e-82
Identity = 140/256 (54.69%), Postives = 178/256 (69.53%), Query Frame = 1 
Query:    7 QVLDRLYPEPPMPLNHTDPFTLLCAVLLSAQTTDGKVNEVTTELFARAPTPRALAAMSHSDVLSIIRTVGLAPTKARHLIATAQQLCERFGGAVPRTMEELQTLPGVGRKTASVVMSGAFGVPAFPVDTHIHRLALRWRLSRSETNVERVEHDLRALWPPAAYGRLHLQFIYFGREYCQARNHMPSRCPVCSWADNPLPTSAPIAAARSKAHHAQQXXXXXRPQPASPDDIPQLLLESPRKLSKTSVLYGERVAEL 774
            Q++D+LYP+PP+P+NH D FTLLC VLLSAQTTD +VN VT ELF  AP P++L+ M+  D+  IIR+VGLAPTKA+HLIA +QQ+ +RF G VP+T E LQ+LPGVGRKTA+VVM  AF  PAFPVDTHIHRLALRW L+++E N  +VE DL A++P  ++ +LHLQFIYFGRE+CQAR H  S CP+CSW     P S P A A     +            ASP           +K SK +++Y ER+ E+
Sbjct:  319 QIMDKLYPDPPIPINHLDSFTLLCGVLLSAQTTDAQVNLVTQELFRVAPNPQSLSKMAQEDLQQIIRSVGLAPTKAKHLIALSQQILDRFDGKVPQTFEGLQSLPGVGRKTAAVVMVQAFNTPAFPVDTHIHRLALRWELTKNEKNASKVEEDLMAVFPRDSWAKLHLQFIYFGREHCQARVHDASACPICSWVKKTGPGS-PKALAELTCLNDYL---------ASPTPT--------KKSSKNAIVYSERMLEM 556
[Close]
BLAST of jgi.p|Trimin1|174424 vs. uniprot
Match: A0A2V7W0G9_9BACT (Endonuclease III n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V7W0G9_9BACT)

HSP 1 Score: 249 bits (635), Expect = 5.950e-80
Identity = 120/196 (61.22%), Postives = 154/196 (78.57%), Query Frame = 1 
Query:    1 VQQVLDRLYPEPPMPLNHTDPFTLLCAVLLSAQTTDGKVNEVTTELFARAPTPRALAAMSHSDVLSIIRTVGLAPTKARHLIATAQQLCERFGGAVPRTMEELQTLPGVGRKTASVVMSGAFGVPAFPVDTHIHRLALRWRLSRSETNVERVEHDLRALWPPAAYGRLHLQFIYFGREYCQARNHMPSRCPVCSWA 588
            + ++LDRLYP+PP+PL H DPFTLL AVLLSAQTTD +VN+VT  LFARA TP  +AA+S S++ S I++ GLAP+KAR++   A +L + +GG VPR ++EL+ LPGVG KTASVVM+ AFG PAFPVDTHIHRLA RW+LS+ + NVE+ E DL+ ++P   + R HLQ IYFGREYC AR+H P  CP+C+WA
Sbjct:   10 IGEILDRLYPQPPIPLAHRDPFTLLIAVLLSAQTTDAQVNKVTPALFARASTPLEMAALSESEIHSFIKSCGLAPSKARNIKKLAHKLLDEYGGQVPRDIDELEKLPGVGHKTASVVMTQAFGEPAFPVDTHIHRLAQRWKLSKGK-NVEQTEADLKKVFPRDEWARRHLQIIYFGREYCPARSHEPDSCPICAWA 204
[Close]
BLAST of jgi.p|Trimin1|174424 vs. uniprot
Match: A0A831ZJH5_9DELT (Endonuclease III (Fragment) n=1 Tax=Nannocystis exedens TaxID=54 RepID=A0A831ZJH5_9DELT)

HSP 1 Score: 249 bits (637), Expect = 7.010e-80
Identity = 127/196 (64.80%), Postives = 148/196 (75.51%), Query Frame = 1 
Query:    1 VQQVLDRLYPEPPMPLNHTDPFTLLCAVLLSAQTTDGKVNEVTTELFARAPTPRALAAMSHSDVLSIIRTVGLAPTKARHLIATAQQLCERFGGAVPRTMEELQTLPGVGRKTASVVMSGAFGVPAFPVDTHIHRLALRWRLSRSETNVERVEHDLRALWPPAAYGRLHLQFIYFGREYCQARNHMPSRCPVCSWA 588
            + ++LD LYPEPP+PL H DPFTLL AV LSAQTTD +VN VT ELF RAPT   LA M  +++L IIRT GLAP K+R+L   A+ L ER GG VPRT  EL+ LPGVG KTASVVMS AF VPAFPVDTHIHRLA RW LS   + V R E DL+AL+P  ++ RLHLQ IYFGRE+C AR H P++CP+CSWA
Sbjct:   10 IHRILDDLYPEPPIPLAHRDPFTLLVAVALSAQTTDRRVNLVTPELFRRAPTAADLAVMEVAEILEIIRTCGLAPAKSRNLQRMAELLVERHGGMVPRTFAELEALPGVGHKTASVVMSQAFAVPAFPVDTHIHRLAARWGLSDGHS-VVRTEADLKALFPRPSWNRLHLQIIYFGREHCPARGHEPAKCPICSWA 204
[Close]
BLAST of jgi.p|Trimin1|174424 vs. uniprot
Match: A0A2N2JKK3_9DELT (Endonuclease III n=1 Tax=Deltaproteobacteria bacterium HGW-Deltaproteobacteria-14 TaxID=2013741 RepID=A0A2N2JKK3_9DELT)

HSP 1 Score: 248 bits (634), Expect = 2.130e-79
Identity = 125/193 (64.77%), Postives = 150/193 (77.72%), Query Frame = 1 
Query:   10 VLDRLYPEPPMPLNHTDPFTLLCAVLLSAQTTDGKVNEVTTELFARAPTPRALAAMSHSDVLSIIRTVGLAPTKARHLIATAQQLCERFGGAVPRTMEELQTLPGVGRKTASVVMSGAFGVPAFPVDTHIHRLALRWRLSRSETNVERVEHDLRALWPPAAYGRLHLQFIYFGREYCQARNHMPSRCPVCSWA 588
            +L+ L+PE P+PL+HTDPFTLL AV+LSAQTTD KVNEVT  LFARAP P A+AA+   ++  +IR +GLAPTKA++L  TA+ L ER  G VPR+ E L+ LPGVG KTASVVMS AFGVPAFPVDTHIHRLA RW LS  +T VE+ E DL+A +P A + RLHLQ I+FGRE+C AR H  SRCP+C WA
Sbjct:   13 ILNELHPETPIPLDHTDPFTLLVAVMLSAQTTDKKVNEVTPALFARAPGPAAMAALEVEEIRDLIREIGLAPTKAKNLRRTAELLLERHQGEVPRSFEALEALPGVGHKTASVVMSQAFGVPAFPVDTHIHRLAARWGLSDGKT-VEKTEADLKATFPEALWNRLHLQIIFFGREHCPARGHDLSRCPICGWA 204
[Close]
BLAST of jgi.p|Trimin1|174424 vs. uniprot
Match: A0A7C2AJM6_9BACT (Endonuclease III n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C2AJM6_9BACT)

HSP 1 Score: 246 bits (629), Expect = 8.500e-79
Identity = 123/196 (62.76%), Postives = 152/196 (77.55%), Query Frame = 1 
Query:    1 VQQVLDRLYPEPPMPLNHTDPFTLLCAVLLSAQTTDGKVNEVTTELFARAPTPRALAAMSHSDVLSIIRTVGLAPTKARHLIATAQQLCERFGGAVPRTMEELQTLPGVGRKTASVVMSGAFGVPAFPVDTHIHRLALRWRLSRSETNVERVEHDLRALWPPAAYGRLHLQFIYFGREYCQARNHMPSRCPVCSWA 588
            ++ VL+ LYPE P+PL+H DPFTLL AV+LSAQTTD KVNEVT ELF RAPTP+A+AA+   ++ S+IR +GLAP KA+ L   +  + ER GG VPRT EEL+ LPGVG KTASVVMS AFGVPAFPVDTHIHRLA RW LS   ++V + EHDL+ ++P   + +LHLQ IYFGRE+C AR+H  S CP+CS+A
Sbjct:   10 IRAVLEELYPEVPIPLDHADPFTLLVAVVLSAQTTDRKVNEVTPELFRRAPTPQAMAALPVDEIRSLIRQIGLAPQKAKALSGLSHLIVERHGGKVPRTFEELEALPGVGHKTASVVMSQAFGVPAFPVDTHIHRLAARWGLSDG-SSVTKTEHDLKRVFPRELWNKLHLQIIYFGREHCPARHHDLSTCPICSFA 204
[Close]
BLAST of jgi.p|Trimin1|174424 vs. uniprot
Match: A0A7S3UM82_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UM82_HETAK)

HSP 1 Score: 253 bits (647), Expect = 1.620e-78
Identity = 136/265 (51.32%), Postives = 174/265 (65.66%), Query Frame = 1 
Query:    1 VQQVLDRLYPEPPMPLNHTDPFTLLCAVLLSAQTTDGKVNEVTTELFARAPTPRALAAMSHSDVLSIIRTVGLAPTKARHLIATAQQLCERFGGAVPRTMEELQTLPGVGRKTASVVMSGAFGVPAFPVDTHIHRLALRWRLS-------RSETNVERVEHDLRALWPPAAYGRLHLQFIYFGREYCQARNHMPSRCPVCSWADNPLPTSAPIAAARSKAHHAQQXXXXXRPQPASPDDIPQLLLESPRKLSKTSVLYGERVAEL 774
            V  +L+ +YP PP+PL+HTD FT LCAV++SAQTTDGKVNEV+ ELF RAP P ALAA+    VLSIIR +GLAPTKAR+L+A A++L    GG VPR    L+ LPGVG KTASV+M+ AFGVPAFPVDTHI RLA+RW LS       +   NV+ +E DL+AL+P +++ +LHLQ IYFGREYC A+ H  S CP+C    +P          + +  +        +P   + DDI  + L SP K++K  V Y  R  EL
Sbjct:   75 VMAILEHIYPNPPIPLDHTDNFTFLCAVIMSAQTTDGKVNEVSRELFRRAPDPAALAALGADRVLSIIRPLGLAPTKARNLVAMAEKLVAEHGGRVPRGFAALEALPGVGHKTASVLMAQAFGVPAFPVDTHIARLAVRWGLSPPPKPGQKESANVKAIEKDLKALFPESSWNKLHLQLIYFGREYCPAKKHEDSNCPICRVLKSP----------KYETDYKSMINQGGKPCRNTLDDI--VRLSSPTKIAKNIVTYSNRTDEL 327
[Close]
BLAST of jgi.p|Trimin1|174424 vs. uniprot
Match: A0A800G1L1_9BACT (Endonuclease III n=4 Tax=cellular organisms TaxID=131567 RepID=A0A800G1L1_9BACT)

HSP 1 Score: 243 bits (621), Expect = 1.170e-77
Identity = 121/196 (61.73%), Postives = 147/196 (75.00%), Query Frame = 1 
Query:    1 VQQVLDRLYPEPPMPLNHTDPFTLLCAVLLSAQTTDGKVNEVTTELFARAPTPRALAAMSHSDVLSIIRTVGLAPTKARHLIATAQQLCERFGGAVPRTMEELQTLPGVGRKTASVVMSGAFGVPAFPVDTHIHRLALRWRLSRSETNVERVEHDLRALWPPAAYGRLHLQFIYFGREYCQARNHMPSRCPVCSWA 588
            +Q++LD L PE P+PL H DPFTLL AVLLSAQTTD +VNEVT +LF    TP  +A +   ++L  IR +GLAPTKAR++   AQQL +  GG VP + +EL+ LPGVG KTASVVM+ +FGVPAFPVDTHIHRLA RW LS S T VER E DL+ ++P AA+ +LHLQ IYFGR+YC AR H   RCP+CSWA
Sbjct:   10 IQEILDELIPETPIPLLHKDPFTLLVAVLLSAQTTDARVNEVTPDLFRAGGTPARMARLGEDEILGYIRRIGLAPTKARNVRRLAQQLLDEHGGGVPESFKELEALPGVGHKTASVVMAQSFGVPAFPVDTHIHRLAGRWGLS-SGTTVERTEADLKKVFPKAAWNQLHLQIIYFGRQYCPARGHDLRRCPICSWA 204
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|174424 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZEQ0_9STRA5.110e-190100.00DNA glycosylase (Fragment) n=1 Tax=Tribonema minus... [more]
A0A1I2BL98_9DELT2.310e-8465.31Endonuclease III n=2 Tax=Nannocystis TaxID=53 RepI... [more]
D8LEA3_ECTSI7.220e-8354.69Putative endonuclease n=1 Tax=Ectocarpus siliculos... [more]
A0A6H5JNP1_9PHAE1.360e-8254.69ENDO3c domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A2V7W0G9_9BACT5.950e-8061.22Endonuclease III n=1 Tax=Acidobacteria bacterium T... [more]
A0A831ZJH5_9DELT7.010e-8064.80Endonuclease III (Fragment) n=1 Tax=Nannocystis ex... [more]
A0A2N2JKK3_9DELT2.130e-7964.77Endonuclease III n=1 Tax=Deltaproteobacteria bacte... [more]
A0A7C2AJM6_9BACT8.500e-7962.76Endonuclease III n=1 Tax=Planctomycetes bacterium ... [more]
A0A7S3UM82_HETAK1.620e-7851.32Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A800G1L1_9BACT1.170e-7761.73Endonuclease III n=4 Tax=cellular organisms TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_114contigContig_114:474971..480300 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|174424|e_gw1.114.24.1
BRITEko00000,ko00001,ko01000,ko03400
KEGG Pathwayko03410,map03410
KEGG koko:K10773
EC4.2.99.18
Preferred nameNTH1
Descriptionoxidized pyrimidine nucleobase lesion DNA N-glycosylase activity
COG categoryL
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0177@1|root,KOG1921@2759|Eukaryota
Evalue1.18e-83
Seed ortholog2880.D8LEA3
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionDNA glycosylase
Ec32 orthologEc-00_001490.1
TranscriptId174746
TrackFilteredModels1
ProteinId174424
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|174424gene_15086Tribonema minus UTEX_B_3156 geneContig_114 474971..480300 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|174424Trimin1|174424|e_gw1.114.24.1Tribonema minus UTEX_B_3156 polypeptideContig_114 474971..480300 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_15086_4exon_15086_4Tribonema minus UTEX_B_3156 exonContig_114 474971..475262 -
exon_15086_3exon_15086_3Tribonema minus UTEX_B_3156 exonContig_114 476722..476923 -
exon_15086_2exon_15086_2Tribonema minus UTEX_B_3156 exonContig_114 478327..478540 -
exon_15086_1exon_15086_1Tribonema minus UTEX_B_3156 exonContig_114 480187..480300 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_15086CDS_15086Tribonema minus UTEX_B_3156 CDSContig_114 480187..480300 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_15086 ID=mRNA_15086|Name=jgi.p|Trimin1|174424|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=822bp|location=Sequence derived from alignment at Contig_114:474971..480300- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GTGCAGCAGGTGCTGGACCGGCTGTACCCCGAGCCGCCCATGCCGCTCAA
CCACACGGACCCCTTCACGCTGCTGTGCGCGGTGCTGCTGTCGGCGCAGA
CGACGGACGGCAAGGTCAACGAGGTGACGACGGAGCTGTTCGCACGCGCG
CCCACGCCGCGCGCGCTCGCCGCCATGTCGCACTCCGACGTGCTGTCGAT
TATACGCACGGTGGGGCTCGCGCCGACCAAGGCGCGTCACCTCATTGCCA
CGGCTCAGCAGCTGTGCGAGCGCTTCGGCGGCGCGGTGCCGCGCACGATG
GAGGAGCTGCAGACGCTGCCTGGCGTCGGTCGCAAGACGGCGTCCGTCGT
CATGAGCGGCGCTTTTGGCGTGCCCGCATTTCCCGTGGACACGCACATCC
ACCGCCTCGCGCTGCGCTGGCGCCTGTCGCGCAGCGAGACGAACGTGGAG
CGCGTCGAGCACGACCTGCGCGCGCTGTGGCCGCCCGCGGCGTACGGCCG
GCTGCACCTGCAGTTCATCTACTTTGGCAGGGAGTACTGCCAAGCCCGCA
ACCATATGCCCTCGCGGTGCCCCGTGTGCAGCTGGGCGGACAACCCGCTG
CCGACGTCGGCGCCCATTGCAGCAGCGCGCAGCAAGGCGCACCACGCGCA
GCAGCAGCAGCAGCGGCAGCGGCCGCAGCCGGCGTCGCCGGACGACATCC
CGCAGCTGCTGCTGGAGAGCCCGCGCAAGCTGTCCAAGACCAGCGTGCTG
TACGGCGAGCGCGTCGCGGAGCTCGCGCGCGGCGGCGCCGCAGCACGCCT
CATCATGAGCGCGACAGTCTGA
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protein sequence of jgi.p|Trimin1|174424

>Trimin1|174424|e_gw1.114.24.1 ID=Trimin1|174424|e_gw1.114.24.1|Name=jgi.p|Trimin1|174424|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=274bp
VQQVLDRLYPEPPMPLNHTDPFTLLCAVLLSAQTTDGKVNEVTTELFARA
PTPRALAAMSHSDVLSIIRTVGLAPTKARHLIATAQQLCERFGGAVPRTM
EELQTLPGVGRKTASVVMSGAFGVPAFPVDTHIHRLALRWRLSRSETNVE
RVEHDLRALWPPAAYGRLHLQFIYFGREYCQARNHMPSRCPVCSWADNPL
PTSAPIAAARSKAHHAQQQQQRQRPQPASPDDIPQLLLESPRKLSKTSVL
YGERVAELARGGAAARLIMSATV*
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mRNA from alignment at Contig_114:474971..480300-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_15086 ID=mRNA_15086|Name=jgi.p|Trimin1|174424|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5330bp|location=Sequence derived from alignment at Contig_114:474971..480300- (Tribonema minus UTEX_B_3156 )
GTGCAGCAGGTGCTGGACCGGCTGTACCCCGAGCCGCCCATGCCGCTCAA
CCACACGGACCCCTTCACGCTGCTGTGCGCGGTGCTGCTGTCGGCGCAGA
CGACGGACGGCAAGGTGCGTGCGCGGTGCGCAGCGCGGCGCGCACCTAAC
CCTGTATGTGACCTTGCCCTCAACCCTGACCTGATTGAAACTCAAGTCAT
TGGCGCATGGGGCGCGCACACTCCCGCGCTGCGTGGCGCGCGCAGGCACA
ACAAGGTGACAGACGGACAGCAAGGTGCGTGCGCGGGAGCTCCATCGCGT
CTCAAGCGACGGCCGTCGTTTCGTTGAGTATAGGCGCTGGCAAGCCTGGC
AAGAATCCTTGATGCTGCTGTGCGCGGTGCTGCTGTCGGCGCAGACGACG
GACGGCAAGGTGCGTGCGTATGCGGCGCGGCGCGGGAGCTTCGTCGCTTC
TTGCACGATGGCATTGTTTGTTGGACAAAGTTACCAGCAAGCCTGGCAAA
ACTCTGCAGAGGCGAGGAATGACAGCGATGTAGTACGGACCCGTCGGTCT
TTCCGGTACCTCAGACTCAAACTGACTTTCGATGCTTGCTTGAGACTAAG
GCTTGGCCCTTTTCCATTACACAGCGTTATCAGCGCGTGCGAAGCGCTTG
GCTGATGGTGCGCGCGAGCCGGAGATCACCGCTGCGTGCTGCGCTGCGGC
GCGATGCCAGGGATACACAGATTGGTCATGGAGGCGCACGCAATGATGGC
CAGATTTGCGCCTGCAGTCATTCATCATGCCGCTGAGCACTGCTGCCCTC
TGCAAACGTGTGCTCGCAGGTGAACAAGGTCACGGCGGAGCTGTTCGCGT
GCGCGCCGACACCGCTGCTGAGCACTGCCTTCAACCCTAACCTGACCCTG
ATGTAACCCTAATGTCAACCTGTGACGCTCTCGCTCACGTGCACGTGTGC
AGGTGAACGTTGTGACGACGGAGCTGTTCGCGTGCGCACCATCACCGCCG
CTGAGCACTGCATTCCAACACAATGCGCCTGAACCGGTCCTGAACGATGC
TGTCCTGTCACCCTAGATCCGAACCATGCTCGCACCACTCACCACGCACA
GCACAGCGCGCCTGCGCGTGTGATGAACGAGGTGACGACTGAACTGTTCT
CGCGCGCGCCGACACCGCCTCTGAGCTATGCTGCCCTCCACAACACTAAT
CAACACTAACCAACACTAATCAGAACCACTCATCGCCTGCTTACGCATCA
CGACCGAGCTGTTGCGCGGGCGCGTCAAAGCAGCCCGTGACCGCTGCTGC
CTTCACAACCCTAATCATCACCAATCAGTACACCTACCTCATCGCCTGCA
CATGCAGGTGAAGGAGGTGACGCGGAGCTATTCGCGCGCGCTCCTACGCC
GCGCGCGCTCGCCGCCATTTTCCACTCCGACAGCTCCTGAGCGATGCTGC
CTGTAACCCTGCCTAACCCTAACGTCAGCCGCTGACGCTCTCGCATGTGC
AGGTGAACGAGGTGATGCCGAAGCTGTTCGCGTGCGCGCCATCACCGCCG
CTGAGCACTGCTGCCCTGTACAACGTGTGCCCACAGGTGAACGAGGTCAC
GACGGAGCTGTTCGCGCGCGCGCCCACCCCGCGCGCGCTCGCCGTCATGT
CCCACTTGAAGTGACGGCGGATGCCGCGCCAACACAGCTCCTGAGCGATG
CCTGTAACCCTAACACAACCCTAACGTCAACCGCTGACGCTCTCTCGCGC
GCGTGTGCAGGTCAACGAGGTGACGACGGAGCTGTTCGCACGCGCGCCCA
CGCCGCGCGCGCTCGCCGCCATGTCGCACTCCGACGTGCTGTCGATTATA
CGCACGGTGGGGCTCGCGCCGACCAAGGCGCGTCACCTCATTGCCACGGC
TCAGCAGCTGTGCGAGCGCTTCGGCGGCGCGGTGCCGCGCACGATGGAGG
AGCTGCAGACGCTGCCTGGCGTCGGTAAGGGCTAGGGCTAGAGTTAGGAA
TAGGATTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGTATTTAGGGT
TACCAAGGCACATCACCTCATCGCCACGGCTCAGCAGCTGTGCGAGCGCT
TCGGCGGCGCGGTGCCGCGCACGATGGAGGAGCTGCAATCCCTGCCCGGC
GTTGGTGAGGGTCAGGGTTAGGCTTAGGGTTAGGGTTAGGGCTTGGGGTT
CGGGTAAGGCACCAAGGCGCGTCACCTCATCGCCACGGCTCAGCAGCTGT
GCGAGGCTTTGGCGGCGCGGTGCCGCGCACGCTGGGGGGGCTGCAGACGC
TGCCCGGCGTTGGTGAGGGTTAGGGTCGAGTTAGGGCTAGTCAGGGTTAG
GGTTAGGGTTAGACTTCCATAGCGGCTCAGCGACTTTCGCAACACGCATG
CCCGTCGTCGGCGAGGGTTACCGTTAGGGTCAGGGTTAGGGCTAGGGTTA
GGGTTCAGGGTTCGGGTTAGCTTTAGAGGTTAAGTGTCAATGAGAGGGTG
CGCGGTCAGAGTTTGAGGTTTGGGTTCGGCGTTAGGGATTGGGCGTCGGT
GAGAGAGGGTGCGCGGAGCGTGTGCTATGACGGAGAAGAGAAGGCGAGCG
CTGCGTTCTAGCCTTGAGCGAAGGTCGCAGATGAATGGCTTATGGCGTCT
GGGCGCACTGGCGAATTGCTCCGTTTAGTTGCTCTTTCCTGACCTCAAGT
CGGTGTCAGTGGTACGGCGGCCTTGGTGAGAGAGCGCGCGCGGAATGCGC
AGCAGCGGTTTGACACGACAGCCTTCGGCTTTGGCAAAGTCACTGTCATC
ATCGAGTTGTGACGAGCGCGCACACTCGCAATGTCGTCCATCGCCCAGCA
CACGCACGCCCTGCTTCGCTGTGCCTCCCTCCCTCCTCATGCTGCTGCCC
CAGCAGCTTTCCCCGGCTGGCGGCCTCAAGGCCCTCACTGCAAGCGGTCT
CAGCTACTGTACCTCCTCCCTCTCCTTCCTGCTACCATCCCCCCCCCCCC
CCCCTTGCAGGCCGTAAGACGGCATCCATCGTCATGAGCGGCGCCTTGGG
CGCGCCGGCGTTCCCCGTGGACACGCACATCCACCGCCCCCTCAAGCCCC
TTACTGCATGTGGTCTCAGCTACTGCACCCCCCCCCCCCCCCCTTTTCCC
GCTGTTATACCTACCATTTCCACCCCCTCCTGCAGGCCGCAAGACGGCGT
CCGTCATCATGAGTGGCGCCTTGGGCGCGCTCGCGTTCCCCATGGACACC
CACGTCCTGTGTCGCAGCAAACCCTAACCCTAGCCCTACCCTAAACCATA
ACCTAACCCTAACCTTTAAGCCGCGCACTGCATGCGATCTTATCCCACCC
CCCCTTCTTGCTATCATTCCTACGCAGGTCGCAAGACGGCGTCCGTCGTC
ATGAGCGGCGCTTTTGGCGTGCCCGCATTTCCCGTGGACACGCACATCCA
CCGCCTCGCGCTGCGCTGGCGCCTGTCGCGCAGCGAGACGAACGTGGAGC
GCGTCGAGCACGACCTGCGCGCGCTGTGGCCGCCCGCGGCGTACGGCCGG
CTGCACCTGCAGTTCATCTACTTTGGCAGGTGAGTCTGACTTTGACCCTC
GTGATGGCGACCGCAGCTCTCAGCGTGCCTGATGACGCCAAGCACGGCCT
GAGTTTTGCAGGCGAGCCTGACTCTGACTCTCACGGCAGCTGTGAATCTG
ACTCTGGTGAGAGTGCATGGACCACTCCCGCAGCCTCCCGCGGCGCACCT
GCAGTTCATCTATTTTGGCAGGTGAGAGAGTCTGACTCCGAATCCTTGCA
GTGGTGAGACTGTACCGGGCACGACTTGCTCGCGCTGCGACTCTGAGTCT
GTGTCTGATGAGCACAAGTGGAGGACGACCTGCGCGCGCTGTGGCCACCC
GCGGCGTACGGCCGCCTGCACCTGCAGCTCATCTACTTTGGCAGGTGACT
CTGACTCTGAGTCGAGCACCACAACTCGCTCATGACTCGATCTCTGACGC
TGACTCTGATGAGCGCAAGTGGAGCACGACCCGCGCGCACCGACCGCTGG
TGGAGTACGGCGAGCAGCACCTGCAGTTCATTTACTTGGCAGGTGAGCGC
TGCGCATGGCGACGACTTTGACTCTGATTCTGATGAGAGCGCGTCGAGAA
TGATTAGCGATGACTCTGACTCTGACTCTGGTGAGCATGGGTGGAGCACG
ACCTGCGTGCGCTGTGGCCGCCCGCGGAGTACGGCCGCCTGCACCTGCAG
TTCATCTACTTTGGCAGGTGAGTCTGACTCTTAATCTTGTGCCGGCAGCA
GCTGTGTGACTCTGATATGACTGCGCGACTGGCTCATGACTCGGACGCTG
ACTCTGATGAGCAACGGCGGAGCACGACCTGCGCATGCTGTGGCCGCCCG
CGGCGTACAGCTGGCTGCATTTGCAATACAGCTTCTTTGGCAGGTGAGTG
TTCTCTGAATCTCGTGGTGGCGGTGAGTTTGAATCTGGCAAGAACGCGTC
CACCGCATGCGGTTTGGGGCCGCTTGCTCGGTTGCTCCCGCAATTCATCA
ACTGCGGCAGCTTGGTGGCAGCTCCGACTTTCACCACTTTGGTGGCAGCT
CTGACTCTCACCAGCAAGAGCTATGGCAAGCTGCGTCTGTAGGTCATACA
CGCTGGACGCTGCATATGACAGCGACTCTTGACTCTGACTCCTGTTCATA
ATGCGGTGATTGCAACTCTGACTCCCAAAAAGTGTCCAGCAAGCACAAAT
CGTTGCGCCGTCTCCCTGCGAAGCAGAGTGAGGCGCTTGTGCAGTTGCGC
CGTCAGTCAAGTATGAGTCCCAATCCGAGTCTTGAACCACTATGTTGAAT
CCGACCACGGTCACTGTGATGATGAGCATCAGCACTTCACATTGTAAGAA
TTCCTGTACTCGCACCCGTACTCACAGCACATCCTCCCGCTGCCGCTGCC
GCCGCTGCTGCCGCCGCCGCTGCCGCTGCCGCTGCCGCCGCCGCCGCCGC
TGCCACCGCCGCCGCTGCCGCCGCCGCCGCCTCCGCAGGGAGTACTGCCA
AGCCCGCAACCATATGCCCTCGCGGTGCCCCGTGTGCAGCTGGGCGGACA
ACCCGCTGCCGACGTCGGCGCCCATTGCAGCAGCGCGCAGCAAGGCGCAC
CACGCGCAGCAGCAGCAGCAGCGGCAGCGGCCGCAGCCGGCGTCGCCGGA
CGACATCCCGCAGCTGCTGCTGGAGAGCCCGCGCAAGCTGTCCAAGACCA
GCGTGCTGTACGGCGAGCGCGTCGCGGAGCTCGCGCGCGGCGGCGCCGCA
GCACGCCTCATCATGAGCGCGACAGTCTGA
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Coding sequence (CDS) from alignment at Contig_114:474971..480300-

>mRNA_15086 ID=mRNA_15086|Name=jgi.p|Trimin1|174424|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=822bp|location=Sequence derived from alignment at Contig_114:474971..480300- (Tribonema minus UTEX_B_3156 )
GTGCAGCAGGTGCTGGACCGGCTGTACCCCGAGCCGCCCATGCCGCTCAA
CCACACGGACCCCTTCACGCTGCTGTGCGCGGTGCTGCTGTCGGCGCAGA
CGACGGACGGCAAGGTCAACGAGGTGACGACGGAGCTGTTCGCACGCGCG
CCCACGCCGCGCGCGCTCGCCGCCATGTCGCACTCCGACGTGCTGTCGAT
TATACGCACGGTGGGGCTCGCGCCGACCAAGGCGCGTCACCTCATTGCCA
CGGCTCAGCAGCTGTGCGAGCGCTTCGGCGGCGCGGTGCCGCGCACGATG
GAGGAGCTGCAGACGCTGCCTGGCGTCGGTCGCAAGACGGCGTCCGTCGT
CATGAGCGGCGCTTTTGGCGTGCCCGCATTTCCCGTGGACACGCACATCC
ACCGCCTCGCGCTGCGCTGGCGCCTGTCGCGCAGCGAGACGAACGTGGAG
CGCGTCGAGCACGACCTGCGCGCGCTGTGGCCGCCCGCGGCGTACGGCCG
GCTGCACCTGCAGTTCATCTACTTTGGCAGGGAGTACTGCCAAGCCCGCA
ACCATATGCCCTCGCGGTGCCCCGTGTGCAGCTGGGCGGACAACCCGCTG
CCGACGTCGGCGCCCATTGCAGCAGCGCGCAGCAAGGCGCACCACGCGCA
GCAGCAGCAGCAGCGGCAGCGGCCGCAGCCGGCGTCGCCGGACGACATCC
CGCAGCTGCTGCTGGAGAGCCCGCGCAAGCTGTCCAAGACCAGCGTGCTG
TACGGCGAGCGCGTCGCGGAGCTCGCGCGCGGCGGCGCCGCAGCACGCCT
CATCATGAGCGCGACAGTCTGA
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