mRNA_15026 (mRNA) Tribonema minus UTEX_B_3156
|
Overview
Homology
BLAST of jgi.p|Trimin1|353262 vs. uniprot
Match: A0A835ZHC0_9STRA (mRNA_cap_enzyme domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHC0_9STRA) HSP 1 Score: 1493 bits (3866), Expect = 0.000e+0 Identity = 877/877 (100.00%), Postives = 877/877 (100.00%), Query Frame = 1
Query: 1 MAPVGDPVDKEIYIFLTQVRRGIMRTLTEEQTARLASRKANLEVEARLGLIHPLGSNTRATHTVPGSGAISRDMQEMKQAQYEFVGGVSGPAFNAIKGGAAALYAVAPAAAXXXXXXXXXXXXXXXXXARIKGECRVRVGAAPGVGCAQTLSADTVYTYEDGARVVVADAGTVRRETKDAKLTMNFQLPSAPYDFRVMVSVEDAQEPAAADAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATWQSPREAPPEAALHWRLDASMVDVSEQLPGGEDAGLTEDSQVLEVELELQPHIQAQWLGAADEEQADLMTKHLALALFRLIGGIDPLEPLSLIADPPRETRLDVAASAKSKCQALRNLGRGXXXXXXXXXDGFPGAMPVNMCRADIAAVQGGAYFISEKTDGVRYLLVVTEEGEGGGACVLVDRKMGCFAVAGGAALAKVFGAGTVLDGELVHRSGAHGAXXXXXXXXXXXXXXXXXXCTAAAHPARAPPALACCASTLASDAKLPLGLSAAAAAPSPPAAAPHGAPAADATFMAFDMRVLRGRRHSPAAYACSPRTRTLPSYTRMLTPGATASLRLNPAWLLLAPPRDAYAYARADGAPAAEATFMAFDMLALRGRPLLAAPFKLRFQQVANQITAPYLAALAGAEGAPTSLKGVPHLRYAQKRFFARSQVGDLLRCVARPPGAARERLYLDARDGRSHRTDGVIFQPDAPYVVGTHRALLKWKWLDVASVDLRAASAEGALRLTTEAQGGAPVDVTGVVALARHDAARLTADMRAAAAGRGAVFIAEVAHDRATGAWVYLGRRPDKDRPNFVTTVMATLVELAEGIGEEELVYRMAVGDAAEDEWDKQSRKYARVLRDWQLEEQ 2631
MAPVGDPVDKEIYIFLTQVRRGIMRTLTEEQTARLASRKANLEVEARLGLIHPLGSNTRATHTVPGSGAISRDMQEMKQAQYEFVGGVSGPAFNAIKGGAAALYAVAPAAAXXXXXXXXXXXXXXXXXARIKGECRVRVGAAPGVGCAQTLSADTVYTYEDGARVVVADAGTVRRETKDAKLTMNFQLPSAPYDFRVMVSVEDAQEPAAADAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATWQSPREAPPEAALHWRLDASMVDVSEQLPGGEDAGLTEDSQVLEVELELQPHIQAQWLGAADEEQADLMTKHLALALFRLIGGIDPLEPLSLIADPPRETRLDVAASAKSKCQALRNLGRGXXXXXXXXXDGFPGAMPVNMCRADIAAVQGGAYFISEKTDGVRYLLVVTEEGEGGGACVLVDRKMGCFAVAGGAALAKVFGAGTVLDGELVHRSGAHGAXXXXXXXXXXXXXXXXXXCTAAAHPARAPPALACCASTLASDAKLPLGLSAAAAAPSPPAAAPHGAPAADATFMAFDMRVLRGRRHSPAAYACSPRTRTLPSYTRMLTPGATASLRLNPAWLLLAPPRDAYAYARADGAPAAEATFMAFDMLALRGRPLLAAPFKLRFQQVANQITAPYLAALAGAEGAPTSLKGVPHLRYAQKRFFARSQVGDLLRCVARPPGAARERLYLDARDGRSHRTDGVIFQPDAPYVVGTHRALLKWKWLDVASVDLRAASAEGALRLTTEAQGGAPVDVTGVVALARHDAARLTADMRAAAAGRGAVFIAEVAHDRATGAWVYLGRRPDKDRPNFVTTVMATLVELAEGIGEEELVYRMAVGDAAEDEWDKQSRKYARVLRDWQLEEQ
Sbjct: 1 MAPVGDPVDKEIYIFLTQVRRGIMRTLTEEQTARLASRKANLEVEARLGLIHPLGSNTRATHTVPGSGAISRDMQEMKQAQYEFVGGVSGPAFNAIKGGAAALYAVAPAAAXXXXXXXXXXXXXXXXXARIKGECRVRVGAAPGVGCAQTLSADTVYTYEDGARVVVADAGTVRRETKDAKLTMNFQLPSAPYDFRVMVSVEDAQEPAAADAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATWQSPREAPPEAALHWRLDASMVDVSEQLPGGEDAGLTEDSQVLEVELELQPHIQAQWLGAADEEQADLMTKHLALALFRLIGGIDPLEPLSLIADPPRETRLDVAASAKSKCQALRNLGRGXXXXXXXXXDGFPGAMPVNMCRADIAAVQGGAYFISEKTDGVRYLLVVTEEGEGGGACVLVDRKMGCFAVAGGAALAKVFGAGTVLDGELVHRSGAHGAXXXXXXXXXXXXXXXXXXCTAAAHPARAPPALACCASTLASDAKLPLGLSAAAAAPSPPAAAPHGAPAADATFMAFDMRVLRGRRHSPAAYACSPRTRTLPSYTRMLTPGATASLRLNPAWLLLAPPRDAYAYARADGAPAAEATFMAFDMLALRGRPLLAAPFKLRFQQVANQITAPYLAALAGAEGAPTSLKGVPHLRYAQKRFFARSQVGDLLRCVARPPGAARERLYLDARDGRSHRTDGVIFQPDAPYVVGTHRALLKWKWLDVASVDLRAASAEGALRLTTEAQGGAPVDVTGVVALARHDAARLTADMRAAAAGRGAVFIAEVAHDRATGAWVYLGRRPDKDRPNFVTTVMATLVELAEGIGEEELVYRMAVGDAAEDEWDKQSRKYARVLRDWQLEEQ 877
BLAST of jgi.p|Trimin1|353262 vs. uniprot
Match: D7FT43_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT43_ECTSI) HSP 1 Score: 193 bits (490), Expect = 1.660e-48 Identity = 121/269 (44.98%), Postives = 158/269 (58.74%), Query Frame = 1
Query: 1840 EATFMAFDMLALRGRPLLAAPFKLRFQQVANQITAPYLAAL--AGAEGAPTSLKGVPHLRYAQKRFFARSQVGDLLRCVARPPGAARERLYLDARDGRSHRTDGVIFQPDAPYVVGTHRALLKWKWLDVASVDLRAASAE------GALRLTTEAQG-GAPVDVTGVVALARHDAARLTADMRAAAAGRGAVFIAEVAHDRATGAWVYLGRRPDKDRPNFVTTVMATLVELAEGIGEEELVYRMAVGDAAEDEWDKQSRKYARVLRDWQ 2619
+A F+AFD+L R R L+ F R + +I Y+ + GAE AP HL KRFF R ++ DL R V + R++ D H+TDG+IFQPDAPY VGT ALLKWKW+D+ASVDLRA A G +RL +EA G VD++ V L+ HD ARL ADM+ + + IAE+A D +G WVY+G RPDKDRPNF+TTV++T+VE+AEG+ EEEL YRM A D+W +Q + WQ
Sbjct: 349 KAIFVAFDILRNRERNLVPCGFLDRLSVLQKEIIPAYVDRVREGGAEAAPDG-----HLMLVPKRFFPRQKIMDLFRQVL---VEGQHRIFRDEERSLHHKTDGIIFQPDAPYKVGTDTALLKWKWVDLASVDLRAYPATAAVGGGGGVRLCSEAGNHGEEVDLSRTVHLSEHDQARLVADMQGSRS-----VIAEMALDPGSGLWVYMGLRPDKDRPNFITTVISTMVEVAEGLSEEELKYRMLAESPASDDWARQEMTMRKRAVQWQ 604
BLAST of jgi.p|Trimin1|353262 vs. uniprot
Match: A0A7S2GA52_9STRA (mRNA guanylyltransferase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GA52_9STRA) HSP 1 Score: 137 bits (344), Expect = 1.430e-31 Identity = 97/241 (40.25%), Postives = 122/241 (50.62%), Query Frame = 1
Query: 1897 APFKLRFQQVANQITAPYLAALAGAEGAPTSLKGVPHLRYAQKRFFARSQVGDLLRCVARPPGAARERLYLDARDGR---SHRTDGVIFQPDAPYVVGTHRALLKWKWLDVASVDLRAASAEGALRLTTEAQGGAPVDVTGV-VALARHDAARLTADMRAAAAGRGAVFIAEVAHDRATGAWVYLGRRPDKDRPNFVTTVMATLVELAEGIGEEELVYRMAVGDAAEDEWDKQSRKYARVL 2607
A F+ RF + A AG P LK +FF R ++ L +C+ G E + + G H TDGVIFQPDA YV GT +ALLKWK+LD +VDLR +G + + G + ++ +L HD RL ADM A V IAEV D ATG+W Y G RPDKDRPN + T + TLVELAE I EEL YRM A D+WD+ K R +
Sbjct: 106 ADFEKRFFEPARNAALTTQPGAAGCASIPVLLK----------KFFQRHRIDRLFKCLQSHSGH-HEYIPDKPQPGPIQVRHLTDGVIFQPDAAYVTGTDKALLKWKFLDTVTVDLRVHMMDGQVVFSCGHNGAEEIMLSKEQTSLGWHDTRRLLADMNAIMT----VAIAEVGLDPATGSWFYKGLRPDKDRPNHLNTYLQTLVELAENITAEELEYRMIAESPAMDKWDEHCAKARRSI 331
BLAST of jgi.p|Trimin1|353262 vs. uniprot
Match: A0A7S1U7J1_9STRA (Hypothetical protein n=4 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U7J1_9STRA) HSP 1 Score: 139 bits (349), Expect = 5.180e-30 Identity = 185/641 (28.86%), Postives = 239/641 (37.29%), Query Frame = 1
Query: 796 WRLDASMVDVSEQLPGGEDAGLTEDSQVLEVELELQPHIQAQWLGAAD-EEQADLMTKHLALALFRLIGGIDPLEPLSLIADPPRETRLDVAASAKSKCQALRNLGRGXXXXXXXXXDGFPGAMPVNMCRADIAAVQGGA------------YFISEKTDGVRYLLVVTEEGEGGGACVLVDRKMGCFAVAGG-AALAKVFGAGTVLDGELVHRSGAHGAXXXXXXXXXXXXXXXXXXCTAAAHPARAPPALACCASTLASDAKLPLGLSAAAAAPSPPAAAPHGAPAADATFMAFDMRVLRGRRHSPAAYACSPRTRTLPSYTRMLTPGATASLRLNPAWLLLAPPRDAYAYARADGAPAAEATFMAFDMLALRGRPLLAAPFKLRFQQVANQITAPYLAALAGAEGAPTSLKGVPHLRYAQKRFFARSQVGDLLRCVARPPGAA---------RERLYL-------DARDGRSHRTDGVIFQPDAPYVVGTHRALLKWKWLDVASVDLRAASAE-GALRLTTEAQGGAPVDVTGVVALARHDAARLTADMRAAAAGRGAVFIAEVAHDRATGAWVYLGRRPDKDRPNFVTTVMATLVELAEGIGEEELVYRMAVGDAAEDEWDKQSRKYARVLRDWQLE 2625
W++D + S L G D+ ++ EVELEL Q L A Q D + L+ L +I ++P E L + E + A A+ LGR FPG MP+NM R +A +Q A Y +EKTDGVRYLLVVT + E VL+DRKM F GG AA+ F GTV+DGELV G TF+AFD+ + G S R L TR+L PGA A+LR A DG AA A DM P LR K F+ ++ LL CV P R R L +AR+ H TDGVIF P+ PY +GT LLKWK+ D S+DL+ + G L T G V + G++ L D ARL AD A A IAE+A D TG WVY RPDK PNF+ TV+ TL ++ G+ ELVYR+ E++W K + DW+++
Sbjct: 292 WQVDLTWTQES-GLGGSGDS----NAHKCEVELELAQSAMTQLLRTASGTPQLDQLVGRLSEELDAIISALNPREEAGL--EDLGEASDAITARAREALTGA--LGRSDRDAREGS---FPGTMPINMSRRSLAGLQHYALKDTGDERGMAPYLCAEKTDGVRYLLVVTAQRE----AVLMDRKMRAFEPPGGVAAVGGCFAPGTVVDGELVLCRMLQGQQVFVVK-----------------------------------------------------------------TFLAFDL-LSDGSNEPIMNMVLSDRLSVLE--TRVL-PGAKAALR-----------------ALQDGVRAALKAGGAGDM-----------PLDLRV-----------------------------------KHFYRLRELPGLLDCVRTPRSGVVMECDTLFPRRREILTCPDRQGEAREALRHLTDGVIFAPNTPYYIGTDMDLLKWKFPDTVSIDLKVVEGDSGELFFYTFGDEG-DVLLPGLIHLHETDTARLRADTALLKARAPA--IAELAADAETGEWVYCCLRPDKGTPNFIGTVLHTLQDVGSGLDAHELVYRLNAPSPLENDWAHHLTKMEKRTVDWKVD 781
BLAST of jgi.p|Trimin1|353262 vs. uniprot
Match: A0A7S1VV02_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VV02_9STRA) HSP 1 Score: 119 bits (297), Expect = 3.630e-26 Identity = 82/205 (40.00%), Postives = 109/205 (53.17%), Query Frame = 1
Query: 2020 QKRFFARSQVGDLLRCVARPPGAARERLYLDARDGRSHRTDGVIFQPDAPYVVGTHRALLKWKWLDVASVDLRAA-----SAEGALRLTTEAQGGAPVDVTGVVALARHDAARLTADMRAAAAGRGAVFIAEVAHDRATGAWVYLGRRPDKDRPNFVTTVMATLVELAEGIGEEELVYRMAVGDAAEDEWDKQSRKYARVLRDWQ 2619
+K F R Q+ LL V G R Y+ + + +H TDG+IFQP++PYV GT R LLKWK+LD ++D+ E LR+ + VD+T + L + RL AD R + + IAEV D TG W YL RPDK PN ++TV+ TL+ELAE + EEL YRM+V D + K R R L D Q
Sbjct: 47 RKNFVKRQQLDALLGKVTEERGM---RTYI-SENVHNHLTDGIIFQPNSPYVCGTDRGLLKWKYLDTVTIDVEILPLTHFDTEDVLRVGVLGEDNTRVDMTRHLHLPGSERRRLEAD-RVESGSK----IAEVGFDPTTGEWYYLTMRPDKIAPNHISTVLGTLLELAESLTTEELRYRMSVPPGTRDTYRKDVRGMQRQLLDHQ 242
BLAST of jgi.p|Trimin1|353262 vs. uniprot
Match: A0A7S3Q9C1_9STRA (mRNA guanylyltransferase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q9C1_9STRA) HSP 1 Score: 124 bits (310), Expect = 2.780e-25 Identity = 94/276 (34.06%), Postives = 137/276 (49.64%), Query Frame = 1
Query: 1849 FMAFDMLALRG-RPLLAAPFKLRFQQVANQITAPYLAALAGAEGAPTSLKGVPHLRY--AQKRFFARSQVGDLLRCVARPPGAARERLYLDARDGRSHRTDGVIFQPDAPYVVGTHRALLKWKWLDVASVDLRAA----------------SAEGALRLTTEAQGGAPVDVTGVVALARHDAARLTADMRAAAAGRGAVFIAEVAHDRATGAWVYLGRRPDKDRPNFVTTVMATLVELAEGIGEEELVYRMAVGDAAEDEWDKQSRKYARVLRDWQ 2619
F+ FD+L L +P+L PF R + A + + A + TS P + +K F R ++ +LL V G R Y + + +H TDG+IFQP+APYV GT +LLKWK+LD ++D++ + + L + + G+ V+++ + L R + RL AD + A I EV + TG W YL RPDK PN ++TVM TL+ELAE +G EEL YRM+V D + K RK + L D Q
Sbjct: 520 FIVFDVLCLSATQPILHLPFAQRLHFLRR---ASFRSETADRDMFATSAVRDPSIAMPLVRKNFVRRIELDELLSHVVEEKGM---RSYRNG-EVHNHLTDGIIFQPNAPYVCGTDHSLLKWKYLDTVTIDVQIMPPGYGQRSYGNNGGNDNDDSKLTVAVTGEEGSMVEMSRFIHLPRSELRRLEADRAESGAN-----IVEVGLEPTTGEWYYLTMRPDKIAPNHISTVMGTLMELAESLGTEELRYRMSVPSGGRDTYRKDMRKMQKQLLDHQ 783
BLAST of jgi.p|Trimin1|353262 vs. uniprot
Match: A0A7S3GU40_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GU40_9STRA) HSP 1 Score: 121 bits (304), Expect = 1.270e-24 Identity = 161/655 (24.58%), Postives = 230/655 (35.11%), Query Frame = 1
Query: 796 WRLDASMVDVSEQLPGGEDAGLTEDSQVLEVELELQPHIQAQWLGAADEEQADLMTKHLALALFRLIGGIDPLEPLSLIADPPRETRLDVAASA--KSKCQALRNLGRGXXXXXXXXXDGFPGAMPVNMCRADIAAVQGGAYFISEKTDGVRYLLVVTEEGEGGGA----CVLVDRKMGCFAVAGGAALAKVFGAGTVLDGELVHRSGAHGAXXXXXXXXXXXXXXXXXXCTAAAHPARAPPALACCASTLASDAKLPLGLSAAAAAPSPPAAAPHGAPAADATFMAFDMRVLRGRRHSPAAYACSPRTRTLPSYTRMLTPGATASLRLNPAWLLLAPPRDAYAYARADGAPAAEATFMAFDMLALRGRPLLAAPFKLRFQQVANQITAPY---LAALAGAEGAPTSLKGVPHL------RYAQKRFFARSQVGDLLRCVARPPGAARERLYLDARDG-----------RSHRTDGVIFQPDAPYVVGTHRALLKWKWLDVASVDLR----------AASAEGALRLTTEAQGGAPVDVTGV----VALARHDAARLTADMRA---AAAGRGAVFIAEVAHDRATGAWVYLGRRPDKDRPNFVTTVMATLVELAEGIGEEELVYRMAVGD-AAEDEWDKQSRKYARVLRDWQLEE 2628
WR+D + VD+ + G + + +EVE EL+ +WL D++Q TK LA L L+ P E ++ +E L V + L + + F GAMPVN+ R + VQ YFI+EK+DG+RYL+ V VLVDR F G + K G G +LDGELV + R L E F+ FD L RG+PL+ F R + + I + L A+ E A + + +P L + +K F R + LL + G ER++ D + R H++DG IFQP+A YV H L+KWKW ++ SVDL+ AA + + L G ++ T V L D RL ADM + A + I EVA+D + G W YL R DKD+PNF+ +VM +E AE I EEL Y ++ E++++ Q K L WQ E
Sbjct: 220 WRIDYTEVDIITKAAGAATPS-GKIKKEIEVEFELEHAPMLEWLRERDDQQVINKTKVLAGQLIHLLDYCIPFE-----SEAEKEASLLVVNDTYFDMEINKLDMMVKPDAVQAGRKKSDFIGAMPVNLTRQNFMEVQKTDYFITEKSDGIRYLMYVVPAPRATDPSDCIAVLVDRSKTIFKFRGCETVGKALGVGVILDGELV--------------------------------------------------------------------------------------------------------------FNRSLK----------------------------------ENVFLVFDALLYRGQPLVDKLFGERLETIRTTILTAFARNLPAVLAQESALNAQRNLPTLPGANPLQLVRKVFVPRREFNTLLSKMRLEEG---ERVFFDPENRAAAPGAPPTSRRHHKSDGFIFQPNARYVFSKHYELMKWKWAELRSVDLQIEIPMEATSNAAGGDWPIYLKCGGPDGTQINCTKRGDTNVGLGEFDTYRLLADMESPELANRNTQSPPIVEVAYDISIGMWSYLHLRKDKDKPNFIDSVMGVFMEQAESISIEELEYSLSASSHGLENDYEVQIEKMKAKLLVWQRSE 721
BLAST of jgi.p|Trimin1|353262 vs. uniprot
Match: A0A7S3ZLY4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZLY4_9STRA) HSP 1 Score: 120 bits (302), Expect = 2.310e-24 Identity = 193/729 (26.47%), Postives = 276/729 (37.86%), Query Frame = 1
Query: 448 TLSADTVYTYEDGARVVVADAGTVRRETKDAKLTMNFQLPSAPYDFRVMVSVEDAQEPAAADAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATWQSPREAPPEAALH-WRLDASMVDVSEQLPGGEDAGLTEDSQVLEVELELQPHIQAQWL----GAADEEQADLMTKHLALALFRLIGGIDPLEPLSLIADPPRETRLDVAASAKSKCQALRNLGRGXXXXXXXXXDGFPGAMPVNMCRADIAAVQGGAYFISEKTDGVRYLLV-VTEEGEGGGACVLVDRKMGCFAVAGGAALAKVFGA-----GTVLDGELVHRSGAHGAXXXXXXXXXXXXXXXXXXCTAAAHPARAPPALACCASTLASDAKLPLGLSAAAAAPSPPAAAPHGAPAADATFMAFDMRVLRGRRHSPAAYACSPRTRTLPSYTRMLTPGATASLRLNPAWLLLAPPRDAYAYARADGAPAAEATFMAFDMLALRGRPLLAAPFKLRFQQVANQITAPYLAALAGAEGAPTSLKGVPHLRYAQKRFFARSQVGDLLRCVARPPGAARERLY--LDARDG--RSHRTDGVIFQPDAPYVVGTHRALLKWKWLDVASVDLR---AASAEGALRLTTEAQGGAPVDVTGVVALARHDAARLTADMRAAAAGRGAVFIAEVAHDRATGAWVYLGRRPDKDRPNFVTTVMATLVELAEGIGEEELVYRMAVGDAAEDEWDK 2580
T S ++ + E G R+VV+ G R E K T +F LPSA YD R+ V+ E A P A A+++ R E H + +D + ++ G+ S V EVE+EL +WL G + EE+ M + A+ R++ ++ + A P + ++A S QA ++ FPGAMPV + R ++ V+ YF++EK+DG R LLV V ++ G C LVDRK G +A+V G GTVLDGE+V H AP F+ FD VL + + S R Y G +S L PP A + DG M D FQ +Q + P A L K P L KRF + + G++L + + + +RDG R+HR+DG++F PD PY+ GT +LLKWK D +VDL A EG + GG VD + V L+ DAARL AD+ A V +AE+ D ++G WVY RPDK+ N T ++TL+ AE E EL YR++ + D+W K
Sbjct: 147 TESVESTFGAETGPRLVVSSDGRQRLEQKSKLDTHDFALPSAAYDVRLQVASE-ANLPLAQ-----------------LPEPTKKHWTFRRIKKRRSCAPASFRGWRVDLTEVTRHDYTVDKLTTQTALEVAKGKGPPPASSSTVYEVEVELDSAATQRWLALPMGVSQEEK---MIADVLSAVLRVLNPVEATDTRGNPAVPAPKMLQNIAKSVLRGIQAGQSRA-------------FPGAMPVGLARRNMKDVRSN-YFVAEKSDGERRLLVAVHDKAAGKVRCCLVDRK-------GTVEVARVTGGKPLKPGTVLDGEIVRNLA-------------------------------------------------------------------HQAP----VFLIFD--VLHNGQEDVSQATFSQR------YF-----GGLSSKTLKDCLSTKCPPPTA---TKEDG--------MHDDG---------------SFQVAVHQPSDPNDALL----------KDAPALPLVPKRFVSSRRCGEILAKITQDNDEEGSVPFGCRVSRDGAFRTHRSDGLVFVPDTPYIAGTDHSLLKWKARDQLTVDLTVRGAGKGEGLGFFAVDDDGG-DVDCSKHVHLSEQDAARLRADV---ADRPSRVTVAELGLDSSSGLWVYHAVRPDKEGGNHFDTFLSTLLLHAESPSEPELRYRLS---SPTDDWAK 706
BLAST of jgi.p|Trimin1|353262 vs. uniprot
Match: A0A7S2KVX1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KVX1_9STRA) HSP 1 Score: 119 bits (297), Expect = 7.100e-24 Identity = 97/267 (36.33%), Postives = 134/267 (50.19%), Query Frame = 1
Query: 1849 FMAFDMLALRGRPLLAAPFKLRFQQVANQITAPYLAALAGAEGAPTSLKGVP-HLRYAQKRFFARSQVGDLLRCVARPPGAARERLYLDARDGRSHR--TDGVIFQPDAPYVVGTHRALLKWKWLDVASVDLRAA------SAEG-ALRLTTEAQGGAPVDVTGVVALARHDAARLTADMRAAAAGRGAVFIAEVAHDRATGAWVYLGRRPDKDRPNFVTTVMATLVELAEGIGEEELVYRMAVGDAAEDEWDKQSRKYARVLRDWQ 2619
F+ FD++ PL+ PF R + + N AA+ + P LK L +K F AR+ + +LL V+ G RLY R G +H TDG+IFQP+ PYV+GT LLKWK+LD ++D+ S +G R+ + G VD+T + L + RL AD + A IAEV D TG W YL RPDK N ++TV+ TL+ELAE +G EL YRM + D + K +R + L D Q
Sbjct: 402 FIVFDVMCCGQTPLVQYPFGERRKAIENASFRKKGAAVDVFD--PALLKNPSIALPLIRKNFVARTALDNLLSHVSEEKGL---RLY---RYGETHHHLTDGIIFQPNRPYVMGTDHHLLKWKYLDTVTIDVELLPPLDNFSGDGDGWRVGVLGEEGTMVDMTRFIKLPVSERLRLEADRHESGAK-----IAEVGFDPETGEWYYLTMRPDKIASNHISTVLGTLLELAECLGTNELRYRMNITSGGRDTYRKDTRAMQKQLLDHQ 655
BLAST of jgi.p|Trimin1|353262 vs. uniprot
Match: A0A7S1G2I8_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1G2I8_9STRA) HSP 1 Score: 116 bits (290), Expect = 6.500e-23 Identity = 80/214 (37.38%), Postives = 109/214 (50.93%), Query Frame = 1
Query: 2020 QKRFFARSQVGDLLRCVARPPGAARERLYLDARDGRSHRTDGVIFQPDAPYVVGTHRALLKWKWLDVASVDLRAASAEGA--------------LRLTTEAQGGAPVDVTGVVALARHDAARLTADMRAAAAGRGAVFIAEVAHDRATGAWVYLGRRPDKDRPNFVTTVMATLVELAEGIGEEELVYRMAVGDAAEDEWDKQSRKYARVLRDWQ 2619
+K F R + +LL V G R Y+++ D H TDG+IFQPD PY +GT L KWK+LD ++D+ G LR+ G+ VD+T V L + RL AD RA + + IAEV D TG W Y RPDK N ++TV+ T++ELAEG+G EL YRM+V + D + K+ R L D+Q
Sbjct: 533 RKNFVRRIDLDNLLSRVNEAKGI---RTYVNS-DAHCHLTDGIIFQPDTPYAMGTDVRLFKWKYLDTVTIDVEILPDHGGYYPGKTNEDNDTPPLRVAVVGDDGSMVDMTRHVRLPTSERMRLEAD-RAESGAK----IAEVGFDPETGEWYYRNMRPDKVASNHISTVIGTILELAEGMGTVELRYRMSVAEGMRDTYRKEVRSMQSQLLDFQ 737 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353262 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_15026 ID=mRNA_15026|Name=jgi.p|Trimin1|353262|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2730bp|location=Sequence derived from alignment at Contig_152:234662..241345+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGCGCCAGTGGGTGACCCCGTGGACAAGGAGATATATATATTCCTGACback to top protein sequence of jgi.p|Trimin1|353262 >Trimin1|353262|estExt_Genemark1.C_Ctg_1520042 ID=Trimin1|353262|estExt_Genemark1.C_Ctg_1520042|Name=jgi.p|Trimin1|353262|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=910bp MAPVGDPVDKEIYIFLTQVRRGIMRTLTEEQTARLASRKANLEVEARLGLback to top mRNA from alignment at Contig_152:234662..241345+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_15026 ID=mRNA_15026|Name=jgi.p|Trimin1|353262|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6684bp|location=Sequence derived from alignment at Contig_152:234662..241345+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_152:234662..241345+ >mRNA_15026 ID=mRNA_15026|Name=jgi.p|Trimin1|353262|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2730bp|location=Sequence derived from alignment at Contig_152:234662..241345+ (Tribonema minus UTEX_B_3156 )back to top |