mRNA_15023 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|177458
Unique NamemRNA_15023
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|177458 vs. uniprot
Match: A0A835Z8G8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8G8_9STRA)

HSP 1 Score: 761 bits (1966), Expect = 1.730e-275
Identity = 455/455 (100.00%), Postives = 455/455 (100.00%), Query Frame = 1
Query:    1 MGLTVGGTTDVSSLKDQVQRFVPRKFEAPPEGTSAFLRPALDGLAKEQLSHKCVRTIVDNFERIPVYNGVPAKFLSAITTNLSTSLDPQVAALYVFDENYWKRRCVEQLGWSACQLIEHGLTWKQLFFENYVARSIEAFKAPPPPGDALLQLLRSCQDYVFTLQVGQMLGHLDMERVCACLPNLACLDLTYGVRNIGMKYERMLLGMKISDAAALARALPAAPCLTTLALRGGLVDDDLLRMLAAGLARAATLTHLDLSHNRIADHGARLLARLLCGXXXXXXXXXXALTALSLADNAIRAEGARHLGRALRENDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNSLGRETAVVLGALLRSPGHGLRVLDLSSNELTDDDARTLRAALEARPAGXXXXXXXXXXXGAPIVSLDLRANRLSAGLEDLEAIEARVHANELAERGERGGA 1365
            MGLTVGGTTDVSSLKDQVQRFVPRKFEAPPEGTSAFLRPALDGLAKEQLSHKCVRTIVDNFERIPVYNGVPAKFLSAITTNLSTSLDPQVAALYVFDENYWKRRCVEQLGWSACQLIEHGLTWKQLFFENYVARSIEAFKAPPPPGDALLQLLRSCQDYVFTLQVGQMLGHLDMERVCACLPNLACLDLTYGVRNIGMKYERMLLGMKISDAAALARALPAAPCLTTLALRGGLVDDDLLRMLAAGLARAATLTHLDLSHNRIADHGARLLARLLCGXXXXXXXXXXALTALSLADNAIRAEGARHLGRALRENDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNSLGRETAVVLGALLRSPGHGLRVLDLSSNELTDDDARTLRAALEARPAGXXXXXXXXXXXGAPIVSLDLRANRLSAGLEDLEAIEARVHANELAERGERGGA
Sbjct:    1 MGLTVGGTTDVSSLKDQVQRFVPRKFEAPPEGTSAFLRPALDGLAKEQLSHKCVRTIVDNFERIPVYNGVPAKFLSAITTNLSTSLDPQVAALYVFDENYWKRRCVEQLGWSACQLIEHGLTWKQLFFENYVARSIEAFKAPPPPGDALLQLLRSCQDYVFTLQVGQMLGHLDMERVCACLPNLACLDLTYGVRNIGMKYERMLLGMKISDAAALARALPAAPCLTTLALRGGLVDDDLLRMLAAGLARAATLTHLDLSHNRIADHGARLLARLLCGXXXXXXXXXXALTALSLADNAIRAEGARHLGRALRENDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNSLGRETAVVLGALLRSPGHGLRVLDLSSNELTDDDARTLRAALEARPAGXXXXXXXXXXXGAPIVSLDLRANRLSAGLEDLEAIEARVHANELAERGERGGA 455          
BLAST of jgi.p|Trimin1|177458 vs. uniprot
Match: D8LCL7_ECTSI (Flagellar associated protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCL7_ECTSI)

HSP 1 Score: 305 bits (782), Expect = 2.650e-95
Identity = 239/527 (45.35%), Postives = 280/527 (53.13%), Query Frame = 1
Query:    7 LTVGGTTDVSSLKDQVQRFVPRKFEAPPEGTSAFLRPALDGLAKEQLSHKCVRTIVDNFERIPVY----------------NG----------------------------------------------------------------VPAKFLSAITTNLSTSLDPQVAALYVFDENYWKRRCVEQLGWSACQLIEHGLTWKQLFFENYVARSIEAFKAPPPPGDALLQLLRSCQDYVFTLQVGQMLGHLDMERVCACLPNLACLDLTYGVRNIGMKYERMLLGMKISDAAALARALPAAPCLTTLALRGGLVDDDLLRMLAAGLARAATLTHLDLSHNRIADHGARLLARLLCGXXXXXXXXXXALTALSLADNAIRAEGARHLGRALRENDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNSLGRETAVVLGALLRSPGHGLRVLDLSSNELTDDDARTLRAALEARPAGXXXXXXXXXXXGAPIVSLDLRANRLSAGLEDLEAIEARVHANELAER 1347
            L+VGGTT+V SL DQ++RF PR F      +  F R A D  A+E L+ KCV+ IVDNFER+P +                NG                                                                +PAKFL  I+  LST LDP+V ALYVFDENYWKRRCVE+LGW  CQ+ EHGLTWKQLFFE YV+  +E F A     D LL+ L SCQ+YVF L++ Q+L H DM  VC  L NL  LD+TY V +IGMKYERML GMKISDA  LA A+ A   + +L L+G L+DDDL+RML  GL R +T+T+LD+SHN+I              XXXXXXXXXX                             XXXXXXXXXXXXXXXXXXXXXXXXXXXXX        S+ RE    L  +LR PG  L  LDLS NEL DDD R L  ALE   +               + S+DLR N +SA LEDLE IE  VHANEL  R
Sbjct:    7 LSVGGTTNVPSLADQIKRFQPRVFSNTESASRVFDRSAKDNPAREALTIKCVKVIVDNFERLPAHDATGGFNVGYRKNDDENGDXXXXXXXXXXXXXXXXVDASAAERTDTAGGDAGFGGMVEGEGGDTKLEGDDEQPHPQQQEGRVIPAKFLQLISAGLSTDLDPKVGALYVFDENYWKRRCVEKLGWQNCQIAEHGLTWKQLFFEAYVSTQLETFDAQKETFDHLLEFLASCQEYVFNLRIRQLLAHPDMRAVCEVLQNLTMLDVTYSVNSIGMKYERMLFGMKISDANCLANAIQATQTMASLVLQGNLIDDDLMRMLMTGLIRNSTITYLDVSHNKITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------SIAREACSSLSMVLRKPGKVLATLDLSCNELQDDDIRLLCVALERNSS---------------LTSIDLRMNDVSADLEDLEKIEKMVHANELRAR 510          
BLAST of jgi.p|Trimin1|177458 vs. uniprot
Match: A0A7S2S000_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S000_9STRA)

HSP 1 Score: 212 bits (540), Expect = 2.280e-61
Identity = 175/366 (47.81%), Postives = 212/366 (57.92%), Query Frame = 1
Query:  283 VFDENYWKRRCVEQLGWSACQLIEHGLTWKQLFFENYVARSIEAFKAPPPPGDALLQLLRSCQDYVFTLQVGQMLGHLDMERVCACLPNLACLDLTYGVRNIGMKYERMLLGMKISDAAALAR--ALPAAP-------CLTTLALRGGLVDDDLLRMLAAGLARAATLTHLDLSHNRIADHGARLLARLLCGXXXXXXXXXXALTALSLADNAIRAEGARHLGRALRENDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNSLGRETAVVLGALLRSPGHGLRVLDLSSNELTDDDARTLRAALEARPAGXXXXXXXXXXXGAPIVSLDLRAN-RLSAGLED-LEAIEARVHANELAER 1347
            VFDENYWKR C+ + GW  C+LIEHGLTWKQL+FE  +   +E F AP    D L   L +CQDY+FTL + ++  HLDM  VC+ LPNL  LDLTYGV+  GM+Y RM+ GMKISDA +LA   AL   P        LT++ L   L+DDDLLRML  GL +  ++THLD+SHN+I +HG RLLA+LL G  XXXXXXXX                             XXXXXXXXXXXXXXXXXXXXXXXXXXX        GNSLG ET   L A+L+ P   L  LDLS N+L   D  TL + L                    + S+DLR N  +    E+ L++I   VH NE+  R
Sbjct:    1 VFDENYWKRCCISKFGWENCELIEHGLTWKQLYFEKLLQEKLEDF-APDGDRDELFDFLEACQDYIFTLTIRELRSHLDMSEVCSRLPNLTKLDLTYGVKKCGMEYVRMMFGMKISDANSLATCLALGGGPGTGVGGGILTSVVLTCNLIDDDLLRMLMTGLIKNDSITHLDVSHNKITNHGVRLLAKLLGGQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------GNSLGNETVGALAAVLQEPECPLSTLDLSCNDLDTQDVITLESVLSENRI---------------MTSIDLRMNPNVGEDAEEALDSINRMVHFNEIDAR 342          
BLAST of jgi.p|Trimin1|177458 vs. uniprot
Match: A0A7S2E3F2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2E3F2_9STRA)

HSP 1 Score: 214 bits (545), Expect = 4.980e-61
Identity = 112/223 (50.22%), Postives = 137/223 (61.43%), Query Frame = 1
Query:  118 ALDGLAKEQLSHKCVRTIVDNFERIPVYNGVPAKFLSAITTNLSTSLDPQVAALYVFDENYWKRRCVEQLGWSACQLIEHGLTWKQLFFENYVARSIEAFKAPP---------------PPGDALLQLLRSCQDYVFTLQVGQMLGHLDMERVCACLPNLACLDLTYGVRNIGMKYERMLLGMKISDAAALARALPAAPCLTTLALRGGLVDDDLLRMLAAGL 741
            A D      L   CV   V NF   PV   +PA+ +  I   L   LDP++ A+ VFDENYWKR C+E+ GW  C L+EHGLTWK+LFFE Y    +E+ +A                  P D +L+LL+ CQDY+FTL V Q+  H DMERV A LPNL+ L+L+YGV   GM YERM+ GMKISDA  L+RAL   P LTTL L+G L+DDDLLRML  GL
Sbjct:    3 ATDNSRISSLYDMCVDATVQNFATRPVAEPIPAEHMREIVARLPVELDPRITAVSVFDENYWKRCCIERFGWHHCHLVEHGLTWKRLFFETYAQECLESLQADEGKEXXXXXXXXXXXEDPLDEVLELLKVCQDYIFTLTVKQLPSHPDMERVLALLPNLSKLELSYGVGKCGMNYERMMFGMKISDANHLSRALMVTPNLTTLVLQGNLIDDDLLRMLTTGL 225          
BLAST of jgi.p|Trimin1|177458 vs. uniprot
Match: A0A7R9UD69_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UD69_9STRA)

HSP 1 Score: 210 bits (534), Expect = 2.160e-59
Identity = 111/245 (45.31%), Postives = 143/245 (58.37%), Query Frame = 1
Query:    7 LTVGGTTDVSSLKDQVQRFVPRKFEAPPEGTSAFLRPALDGLAKEQLSHKCVRTIVDNFERIPVYNGVPAKFLSAITTNLSTSLDPQVAALYVFDENYWKRRCVEQLGWSACQLIEHGLTWKQLFFENYVARSIEAFKAPPPPGDALLQLLRSCQDYVFTLQVGQMLGHLDMERVCACLPNLACLDLTYGVRNIGMKYERMLLGMKISDAAALARALPAAPCLTTLALRGGLVDDDLLRMLAAGL 741
            ++VG TTD  +L D V  +  R  +   E                 L+  CV+ +VDNFE  PVY+ +P+      T+ L T+++P VAA Y+F E YWKRRC  +  W  C++ EHGL WKQL+FE +   ++EA+     P + LL  L  C +Y+FTL   Q+LGH DM RVCA  PNL  L + YGVR  GM YER+L GMKISDA  L + L A   LTTL L   L+DDDLLRML  GL
Sbjct:    8 VSVGVTTDTVALSDVVTLYRKRNLDHHKERDKIRAPVGRVRHWVPSLAQLCVKHLVDNFEEHPVYDVIPSTHAQLFTSQLPTTINPIVAAQYIFSEGYWKRRCASKYAWHNCRIQEHGLMWKQLYFETHAQETLEAWDDEDEPEETLLNQLAVCAEYIFTLTAHQLLGHPDMSRVCALFPNLCRLRIRYGVRKTGMDYERILFGMKISDAQGLTKYLKATDTLTTLILSMNLLDDDLLRMLMVGL 252          
BLAST of jgi.p|Trimin1|177458 vs. uniprot
Match: A0A8K1FGP6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FGP6_PYTOL)

HSP 1 Score: 203 bits (516), Expect = 7.520e-57
Identity = 111/251 (44.22%), Postives = 151/251 (60.16%), Query Frame = 1
Query:   10 TVGGTTDVSSLKDQVQRFVPRKFEAPP-----EGTSAFLRPALDGLAKEQLSHKCVRTIVDNFERIPVYNGVPAKFLSAITTNLSTSLDPQVAALYVFDENYWKRRCVEQLGWSACQLIEHGLTWKQLFFENYVARSIEAFKAPPPPGDALLQLLRSCQDYVFTLQVGQMLGHLDMERVCACLPNLACLDLTYGVRNIGMKYERMLLGMKISDAAALARALPAAPCLTTLALRGGLVDDDLLRMLAAGLAR 747
            TVG TTDVS+L DQV+++  R           E +SA + P+L  L        C++ I D F   P  + VP KFL  + + L   +D  ++A  + DENYWKR C+ +  W   Q+ EHGLTWKQLF E  +   +E F +     D L+ ++++CQ+Y+FTL++ Q+L HLD+  VC+ L NL  L LTYGV+ IGMKYERML GMKISDA  L+  +     LTTL L   L+DDDLLRM+  GL +
Sbjct:    7 TVGSTTDVSALSDQVKKYRSRVVGGYHNNDGLERSSAAVIPSLVIL--------CLKVISDKFRLEPKIHNVPRKFLPEVMSRLPLDMDVCISAPNITDENYWKRCCMSKSAWKNLQISEHGLTWKQLFMEKNLQDMLEGFDSSTDDNDELIDVVKACQEYIFTLEIDQLLSHLDLNEVCSHLKNLTRLRLTYGVKQIGMKYERMLFGMKISDATNLSHIVKNTKTLTTLWLPNNLLDDDLLRMVMTGLVK 249          
BLAST of jgi.p|Trimin1|177458 vs. uniprot
Match: A0A1V9ZIV4_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZIV4_9STRA)

HSP 1 Score: 197 bits (500), Expect = 1.800e-54
Identity = 112/252 (44.44%), Postives = 152/252 (60.32%), Query Frame = 1
Query:   10 TVGGTTDVSSLKDQVQRFVPRKFEAPPEGTSAFLRPALDGLAKEQLSHKCVRTIVDNFE-RIPVYNGVPAKFLSAITTNLSTSLDPQVAALYVFDENYWKRRCVEQLGWSACQLIEHGLTWKQLFFENYVARSIEAFK---APPPPGDALLQLLRSCQDYVFTLQVGQMLGHLDMERVCACLPNLACLDLTYGVRNIGMKYERMLLGMKISDAAALARALPAAPCLTTLALRGGLVDDDLLRMLAAGLARAA 753
            +VG TT V SL DQV+++  R   A    T +  +      A + L   CV+ +   F  +     G+PA+FL  +T  L   L    AA ++ DENYWKR C+   GW+  Q+ +HGLTWKQL+ E  V  ++E F    A  P  D LL++ R+C  Y+FTL++ Q+L H+D+  V  CLPNL  L L+YGV++IGMKYERML GMKISDA AL+ A+ +   L+TL L   L+DDDLLRML  GL + A
Sbjct:    5 SVGSTTAVCSLSDQVKKYKARTI-ADDHDTGSNNKHGKPRRAIDTLVILCVKVLTGQFSTKANPMQGIPARFLPEVTQRLPMDLPLTAAAPHIHDENYWKRCCLNHPGWTNLQISQHGLTWKQLYLERTVQDALETFDPTDASTPYADLLLRI-RACAPYIFTLEIEQLLSHVDVNEVFQCLPNLTQLKLSYGVKHIGMKYERMLFGMKISDATALSHAIKSTITLSTLMLPRNLLDDDLLRMLMTGLIKNA 254          
BLAST of jgi.p|Trimin1|177458 vs. uniprot
Match: A0A485LRU7_9STRA (Aste57867_24942 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LRU7_9STRA)

HSP 1 Score: 196 bits (499), Expect = 3.840e-54
Identity = 108/267 (40.45%), Postives = 151/267 (56.55%), Query Frame = 1
Query:   10 TVGGTTDVSSLKDQVQRFVPRKFEAPPEGTSAFLRPALDGLAKEQLSHKCVRTIVDNFE-RIPVYNGVPAKFLSAITTNLSTSLDPQVAALYVFDENYWKRRCVEQLGWSACQLIEHGLTWKQLFFENY-----------------VARSIEAFK---APPPPGDALLQLLRSCQDYVFTLQVGQMLGHLDMERVCACLPNLACLDLTYGVRNIGMKYERMLLGMKISDAAALARALPAAPCLTTLALRGGLVDDDLLRMLAAGLAR 747
            +VG TT V SL DQV+++ PR  +   + +    R AL     + L   C++ I + F  +     G+P KFL  +T  L  +L     A ++ DEN+WKR C+ + GW+  Q+ +HGLTWKQL+   Y                 +   +EAF        P   LL  +R+C  ++F+L++ Q+L HLD+  V +CLPNL  L LTYGV+NIGMKYERML GMKISDA +L+ A+     L+TL L   L+DDDLLRML  GL +
Sbjct:    6 SVGATTAVCSLSDQVKKYRPRLIQDEKDASGNQSRKALPKREIDSLVIMCIKVITERFSTKANPMEGIPTKFLPDVTLRLPLTLHLTATAPHIADENFWKRSCLNRAGWTNLQIAQHGLTWKQLYLGTYSSIHRLEGGLTVATERNLQEELEAFDPTHTDAAPYAELLTKIRACAPHIFSLEIDQLLSHLDLHEVTSCLPNLTKLKLTYGVKNIGMKYERMLFGMKISDATSLSHAIKTTTTLSTLQLPSNLLDDDLLRMLMTGLIK 272          
BLAST of jgi.p|Trimin1|177458 vs. uniprot
Match: H3GJR7_PHYRM (Uncharacterized protein n=16 Tax=Phytophthora TaxID=4783 RepID=H3GJR7_PHYRM)

HSP 1 Score: 196 bits (498), Expect = 4.160e-54
Identity = 107/250 (42.80%), Postives = 144/250 (57.60%), Query Frame = 1
Query:   10 TVGGTTDVSSLKDQVQRFVPRKFEAPPEGTSAFLRPALDGLAKEQLSHKCVRTIVDNFERIPVYNGVPAKFLSAITTNLSTSLDPQVAALYVFDENYWKRRCVEQLGWSACQLIEHGLTWKQLFFENYVARSIEAFKAPPPPGDALLQLLRSCQDYVFTLQVGQMLGHLDMERVCACLPNLACLDLTYGVRNIGMKYERMLLGMKISDAAALARALPAAPCLTTLALRGGLVDDDLLRMLAAGLARAATL 759
            TVG TTDV +L DQV+++  R      +      + A        L   C++ I D F   P    VP +FL  +   L   LD  V A  V DENYWKR C+ Q  W   Q+ +HGLTWKQLF E Y+   +E F       D L+ ++++  +Y+FTL++ Q+L HLD+  +CA L NL  L +TYGV+ IGM+YERML GMKISDA  L+  + A+  LTTL L   L+DDDLLRML  GL +  ++
Sbjct:    6 TVGTTTDVCALSDQVKKYRSRVVHNA-QAADNDAKNATSATVIPSLLLMCLKIISDRFRLQPKAQNVPRQFLPEVMARLPLDLDVCVTAPNVTDENYWKRCCLSQTQWKNTQIADHGLTWKQLFLEKYLQDLLEDFDPAGDDHDHLMAVVKASSEYIFTLEIDQLLSHLDLNEICAQLHNLTRLRVTYGVKQIGMRYERMLFGMKISDATNLSHIIKASNTLTTLWLPSNLLDDDLLRMLMTGLVKNTSI 254          
BLAST of jgi.p|Trimin1|177458 vs. uniprot
Match: K3WV20_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WV20_GLOUD)

HSP 1 Score: 196 bits (497), Expect = 4.830e-54
Identity = 107/247 (43.32%), Postives = 147/247 (59.51%), Query Frame = 1
Query:   10 TVGGTTDVSSLKDQVQRFVPRKFEAPPEGTSAFLRPALDGLAK-EQLSHKCVRTIVDNFERIPVYNGVPAKFLSAITTNLSTSLDPQVAALYVFDENYWKRRCVEQLGWSACQLIEHGLTWKQLFFENYVARSIEAFKAPPPPGDALLQLLRSCQDYVFTLQVGQMLGHLDMERVCACLPNLACLDLTYGVRNIGMKYERMLLGMKISDAAALARALPAAPCLTTLALRGGLVDDDLLRMLAAGLAR 747
            TVG TT V +L DQV+++  R       G S   R + +G      L   C++ I D F      + VP KFL  +   L   L+  V+A  V DENYWKR C+ +L W   Q+ +HGLTWKQLF E ++   +E F A     D L+ ++++CQ+Y+FTL++ Q+L HLD+  +C+ + NL  L LTYGV+ +GMKYERML GMKISDA  L+  +     LTTL L   L+DDDLLRM+  GL +
Sbjct:    6 TVGSTTAVCALSDQVKKYRSRVVGGHHAGESDAKRSSNNGGHPIPSLLLMCLKVISDRFRLESKVHSVPRKFLPDVMARLPLDLNVCVSAPNVSDENYWKRCCMSKLAWKNLQIEDHGLTWKQLFLEKHLQDLLEDFDATTDDPDHLVDVVKACQEYIFTLEITQLLSHLDLNELCSHMKNLTRLQLTYGVKQVGMKYERMLFGMKISDATNLSHIVKNTKTLTTLWLPSNLLDDDLLRMVMTGLVK 252          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|177458 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z8G8_9STRA1.730e-275100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LCL7_ECTSI2.650e-9545.35Flagellar associated protein n=2 Tax=Ectocarpus Ta... [more]
A0A7S2S000_9STRA2.280e-6147.81Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2E3F2_9STRA4.980e-6150.22Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7R9UD69_9STRA2.160e-5945.31Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A8K1FGP6_PYTOL7.520e-5744.22Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A1V9ZIV4_9STRA1.800e-5444.44Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A485LRU7_9STRA3.840e-5440.45Aste57867_24942 protein n=1 Tax=Aphanomyces stella... [more]
H3GJR7_PHYRM4.160e-5442.80Uncharacterized protein n=16 Tax=Phytophthora TaxI... [more]
K3WV20_GLOUD4.830e-5443.32Uncharacterized protein n=1 Tax=Globisporangium ul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_152contigContig_152:209898..213888 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|177458|e_gw1.152.54.1
BRITEko00000,ko00001
KEGG Pathwayko04621,map04621
KEGG koko:K20865
Descriptioninterleukin-8 biosynthetic process
COG categoryS
Max annot lvl2759|Eukaryota
EggNOG OGsKOG4308@1|root,KOG4308@2759|Eukaryota
Evalue4.35e-96
Seed ortholog2880.D8LCL7
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionflagellar associated protein
Ec32 orthologEc-03_002410.1
TranscriptId177780
TrackFilteredModels1
ProteinId177458
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|177458gene_15023Tribonema minus UTEX_B_3156 geneContig_152 209898..213888 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|177458Trimin1|177458|e_gw1.152.54.1Tribonema minus UTEX_B_3156 polypeptideContig_152 209898..213888 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_15023_1exon_15023_1Tribonema minus UTEX_B_3156 exonContig_152 209898..210164 +
exon_15023_2exon_15023_2Tribonema minus UTEX_B_3156 exonContig_152 210360..210528 +
exon_15023_3exon_15023_3Tribonema minus UTEX_B_3156 exonContig_152 210960..210964 +
exon_15023_4exon_15023_4Tribonema minus UTEX_B_3156 exonContig_152 211287..211434 +
exon_15023_5exon_15023_5Tribonema minus UTEX_B_3156 exonContig_152 211807..212283 +
exon_15023_6exon_15023_6Tribonema minus UTEX_B_3156 exonContig_152 213587..213888 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_15023CDS_15023Tribonema minus UTEX_B_3156 CDSContig_152 209898..210164 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_15023 ID=mRNA_15023|Name=jgi.p|Trimin1|177458|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1368bp|location=Sequence derived from alignment at Contig_152:209898..213888+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGGACTGACCGTGGGTGGCACCACAGATGTGTCGTCCCTCAAGGATCA
GGTGCAGAGGTTCGTCCCACGAAAATTTGAGGCACCGCCAGAAGGAACCA
GCGCTTTCTTAAGGCCGGCTCTAGACGGCCTGGCGAAGGAGCAGCTGTCG
CACAAGTGCGTGCGAACGATAGTAGACAACTTCGAGAGGATACCGGTCTA
CAATGGGGTGCCAGCGAAGTTCTTGTCGGCCATCACCACAAACCTTAGCA
CCTCTCTAGACCCTCAGGTGGCGGCCCTATATGTATTTGACGAAAACTAC
TGGAAGCGGCGATGCGTGGAGCAGCTGGGCTGGTCGGCGTGCCAGCTCAT
AGAGCACGGCCTGACGTGGAAGCAGCTCTTCTTTGAGAATTACGTCGCAC
GCAGCATAGAGGCATTCAAAGCGCCACCGCCGCCAGGTGACGCTCTGCTG
CAGCTGCTGCGCTCGTGCCAGGACTACGTCTTCACGCTGCAAGTGGGGCA
GATGCTGGGGCACCTGGACATGGAGCGCGTGTGCGCGTGCCTGCCCAACC
TCGCGTGCCTGGACCTCACGTACGGCGTCAGGAACATAGGCATGAAGTAC
GAGCGCATGCTGCTCGGCATGAAGATCAGCGACGCGGCGGCGCTCGCGCG
CGCGCTGCCCGCGGCGCCGTGCCTCACGACCCTCGCGCTGCGCGGCGGCC
TCGTCGACGACGACCTGCTGCGTATGCTCGCGGCGGGCCTCGCGCGCGCC
GCGACGCTCACGCACCTCGACCTCTCCCACAACCGCATCGCGGACCACGG
CGCGCGGCTGCTGGCGCGCCTGCTGTGCGGCGGCGGCGGCGGCGGCGGCG
GCGGCGGCGGCGCGCTCACGGCGCTGAGCCTCGCGGACAACGCGATCCGC
GCGGAGGGCGCGCGCCACCTCGGGCGCGCGCTGCGCGAGAACGACGCGCT
GCAGGCGCTGAACCTGCGGCTGAACCGGCTCACGGACGACGGCGGGCGCA
TGCTGCTCGAGGGGCTGCGCGACAACGCGACGCTCACGTCGCTCAACCTC
AGCGGCAACTCGCTCGGGCGCGAGACCGCCGTCGTCCTCGGAGCGCTGCT
GCGCAGCCCCGGCCACGGCCTGCGCGTCCTCGACCTCAGCAGCAACGAGC
TCACGGACGACGACGCGCGCACGCTGCGCGCGGCGCTGGAGGCGCGGCCG
GCCGGCGGCGGCGGCGGCGGCGGCGGCAGCAGCGCCGGCGGCGCTCCCAT
CGTGAGCCTCGACCTGCGCGCCAACCGGCTGTCGGCGGGGCTGGAGGACC
TGGAGGCGATCGAGGCGCGCGTGCACGCCAACGAGCTCGCGGAGCGCGGC
GAGCGCGGCGGTGCGTGA
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protein sequence of jgi.p|Trimin1|177458

>Trimin1|177458|e_gw1.152.54.1 ID=Trimin1|177458|e_gw1.152.54.1|Name=jgi.p|Trimin1|177458|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=456bp
MGLTVGGTTDVSSLKDQVQRFVPRKFEAPPEGTSAFLRPALDGLAKEQLS
HKCVRTIVDNFERIPVYNGVPAKFLSAITTNLSTSLDPQVAALYVFDENY
WKRRCVEQLGWSACQLIEHGLTWKQLFFENYVARSIEAFKAPPPPGDALL
QLLRSCQDYVFTLQVGQMLGHLDMERVCACLPNLACLDLTYGVRNIGMKY
ERMLLGMKISDAAALARALPAAPCLTTLALRGGLVDDDLLRMLAAGLARA
ATLTHLDLSHNRIADHGARLLARLLCGGGGGGGGGGGALTALSLADNAIR
AEGARHLGRALRENDALQALNLRLNRLTDDGGRMLLEGLRDNATLTSLNL
SGNSLGRETAVVLGALLRSPGHGLRVLDLSSNELTDDDARTLRAALEARP
AGGGGGGGGSSAGGAPIVSLDLRANRLSAGLEDLEAIEARVHANELAERG
ERGGA*
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mRNA from alignment at Contig_152:209898..213888+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_15023 ID=mRNA_15023|Name=jgi.p|Trimin1|177458|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3991bp|location=Sequence derived from alignment at Contig_152:209898..213888+ (Tribonema minus UTEX_B_3156 )
ATGGGACTGACCGTGGGTGGCACCACAGATGTGTCGTCCCTCAAGGATCA GGTGCAGAGGTTCGTCCCACGAAAATTTGAGGCACCGCCAGAAGGAACCA GCGCTTTCTTAAGGCCGGCTCTAGACGGCCTGGCGAAGGAGCAGCTGTCG CACAAGTGCGTGCGAACGATAGTAGACAACTTCGAGAGGATACCGGTCTA CAATGGGGTGCCAGCGAAGTTCTTGTCGGCCATCACCACAAACCTTAGCA CCTCTCTAGACCCTCAGGTATGTTATCATGTGTCCTTGAACGAGCCACCA TCGAATCCTGCCATTGCGTAGGCCGGATCGCCATCAGCACCTGCCGACTG CTGCCAACCCTCAAGCCATGGATTACTCAACAGCCGTCAGCTGAAGTGAC ATCTATCCCCTGCTCGCTTCTGTTACATCCTGCACCTGCGTGTTCTGCAC CGCTCATCGCAGGTGGCGGCCCTATATGTATTTGACGAAAACTACTGGAA GCGGCGATGCGTGGAGCAGCTGGGCTGGTCGGCGTGCCAGCTCATAGAGC ACGGCCTGACGTGGAAGCAGCTCTTCTTTGAGAATTACGTCGCACGCAGC ATAGAGGCATTCAAAGCGCCACCGCCGCCAGGTGATTTCCGCCCGTAGGC AGCTGGTAGCCATGGCGAGCGATATGTGTTGCTGGTGATCTGGGGGCAGC ACCGGCCATGCGTAATTTCCGCTGGTTAAATTGCACAGACATGTGAGCAG AGGTGCCACAGCGCTGACATGAGTGGCGGTGCGGTTGAGCCTTGTCAATG CTAGCATGTAGATGATACTGGTGTGCGCCAGATGATGCAAACATGACCCA ACCGCACGATGCCATCTGCAGCACAGCATAGTACCGCGGCAGCTGGGAAG GTGTGCTCAGCGTGCTCCGCTGCCTTCAGCAGCTGCAGTGCATGAATGCT GCAATTCGTCCACAAGTTGCAGGACACACCACTTCTGAGTACTGCACCTT ACTTCTGGTCTCTTGACTGGCGGCGCAGCGGCTGCTGCCGCGCTGCAGGG AGCGCAGGGCAGGTGACGTGTGCGCGGCAGTGCGCCTGCAGCCATCACGC ATGCACGTCCTGCAGCCGTGCAACAAACGTATTGAGCTCACGGGGCGCTG CGCGACAGTTGCACATGCATACCGGCAGCAGCCGCACGGTAGTATTGACC GACATGTAAAGCAGCCGCCAGCTCTGTTCACCGCACGCGTTCAGTCGCTG TGCCACCACGCCACCCTCTTCAACTGCCTCCCTGACAGTGCCCCCCCCCC CCCCACCCCGCAACTGCGCCCCCCCCTCTTCAGACCCCGACGGCGGCGGC GGCGCGGAGGCGAAGCAGGACGGCGGCGACTCGCTGGAGGCTCTGCTGCA GCTGCTGCGCTCGTGCCAGGACTACGTCTTCACGCTGCAAGTGGGGCAGA TGCTGGGGCACCTGGACATGGAGCGCGTGTGCGCGTGCCTGCCCAACCTC GCGTGCCTGGACCTCACGTACGGCGTCAGGAACATAGGTGACGCAGGGGC AGGGGCGCACGCACGCGGGGGGGGGGGGGGGGGGGGGGGAGTCTCACTCC AAACCAAAAGCTGACGGGCCTGGCACGAAACGTATATTTTCCCCCTGCCT GTATCCTGTTTTTTGCCTCGGGGATGCGCGATGCAGCAGTGCTCATCCCG TGCAACGTGTTCAATATCAACCTCAGCAGTGACCTCGAGTTGACGTGCCC TAGCGCAGCAGGCAGCGGGACGCGCAAGCACCCCCGCATGCAACGAACCG CATTGCGCAACCTCAAACTCCCCCATCGCACGCCTGCCCCACCCCCATTT CGTCTCCCAACCTCAACCCCCCCCCCGCCACCCCCCCCCCCCCCCCCCCC GCCCCCCAGGCATGAAGTACGAGCGCATGCTGCTCGGCATGAAGATCAGC GACGCGGCGGCGCTCGCGCGCGCGCTGCCCGCGGCGCCGTGCCTCACGAC CCTCGCGCTGCGCGGCGGCCTCGTCGACGACGACCTGCTGCGTATGCTCG CGGCGGGCCTCGCGCGCGCCGCGACGCTCACGCACCTCGACCTCTCCCAC AACCGCATCGCGGACCACGGCGCGCGGCTGCTGGCGCGCCTGCTGTGCGG CGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGCGCTCACGGCGCTGAGCC TCGCGGACAACGCGATCCGCGCGGAGGGCGCGCGCCACCTCGGGCGCGCG CTGCGCGAGAACGACGCGCTGCAGGCGCTGAACCTGCGGCTGAACCGGCT CACGGACGACGGCGGGCGCATGCTGCTCGAGGGGCTGCGCGACAACGCGA CGCTCACGTCGCTCAACCTCAGCGGCAACTCGCTCGGTGAGCGGCCGCGC GCGCGCGGTGTTGTGTTTTGCCTGACAGCGCTGCCTGCGCCTGGCTGTGG ATGTTCGGTGGTCAGTGTGTCTTTGCGCGATGCCTTCGACGCGCGCATGC CTGCGTTGCCGCAAAGTGGTGTGTCGCACGCGCTACTGTGTGTTCTGCTT GGGCTTTTTGCCTGCGCCTGGCTATGGATGTTCGGCGATCAGTGCATCTC TGTGCGAGGCGTGCATGCGTGTGTTGCCGCAAAGTTGTGTGTTCACCGCC AACTGCAGCGGTACGCAAATTCTTCGCTGCCAGGTGCCATGTGACGTGTG CTCTGACAGTTCCACCCCGCCATCGCCCCCGCTGCGGCGTAGGGTCCCTT CCCGCTCTGCACACATTGCACGGAGCAGCATTCCTTCTTGGTTTGCCGCG GCAGGGCCATGAAATGCGCTATCTTGCCATTATCAGTGATGCCCACAAAT GCCGCCACAGCATTGGCTCTAGCAGTGCCCTCGGCACTGCCACCTCCGCT GACGTTGGGCACACAACATATCAGCAGCGGTTTGGTGGAATGCTGCTACA TAGCCGTGCGATGCGCAAAGCAGCGTTCCTGCCGCCACCGCTGCTGCGCT AGCGCCGGCGCGCGACAGGGACTCCCTGCCTCGCGACGTAGCTCCTCAAC ACACATGTGTGGCGATGTTCGCCCATGTTTTCATGGTCGTTTCATTGGAG CGCTGCTGCAGCTGCGTCACATGCCCAATCAGCACACAAGTGCGCCTGGC CGTTTGCGGGCGCCTCATGCATGGCTGTACTGCGTGCGGTGACAAGCGTC ACCCACGGTGGCACGGGCGCCGGAGCCTCGACGTCACAGGCGCCAACGTT GCGCTGATGTCTGGAATCGGCTTCGGTGCTTGACAACAAAGATGCAGACA CCCGCCTTCATCTGCCGTTACTTGTGAGCTCGTCCGGGCACTGTTGTGAC CCTGCTGCCGCACTTGCCTGCTTGACCTGTATCTCCTTCACCGCGACGTG CGGCAGCGCCGCCTCCGCCGCTGTCTCCACGGGCCGCGCCGGTCCGCGCG CGACGCGCATCGATGACGCGCGCGGGTACAAAACCCTTCCAGTCACTCCC ACCCCCCACCCACCCACCCCCCTGCCCCCCCCGGCCCCTCACTTCTGTCC CCCGTCCCCCTAGTTTGCAGGGCGCCGTCGTCCTCGGAGCGCTGCTGCGC AGCCCCGGCACAGGCACTTCACCCCCCCCCCACCCACGCTCCCGCCCCCC CGGCCCCTCACTTCTGTCCCCCTTTCCCCTAATTCACAGGGCGCGAGACC GCCGTCGTCCTCGGAGCGCTGCTGCGCAGCCCCGGCCACGGCCTGCGCGT CCTCGACCTCAGCAGCAACGAGCTCACGGACGACGACGCGCGCACGCTGC GCGCGGCGCTGGAGGCGCGGCCGGCCGGCGGCGGCGGCGGCGGCGGCGGC AGCAGCGCCGGCGGCGCTCCCATCGTGAGCCTCGACCTGCGCGCCAACCG GCTGTCGGCGGGGCTGGAGGACCTGGAGGCGATCGAGGCGCGCGTGCACG CCAACGAGCTCGCGGAGCGCGGCGAGCGCGGCGGTGCGTGA
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Coding sequence (CDS) from alignment at Contig_152:209898..213888+

>mRNA_15023 ID=mRNA_15023|Name=jgi.p|Trimin1|177458|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1368bp|location=Sequence derived from alignment at Contig_152:209898..213888+ (Tribonema minus UTEX_B_3156 )
ATGGGACTGACCGTGGGTGGCACCACAGATGTGTCGTCCCTCAAGGATCA
GGTGCAGAGGTTCGTCCCACGAAAATTTGAGGCACCGCCAGAAGGAACCA
GCGCTTTCTTAAGGCCGGCTCTAGACGGCCTGGCGAAGGAGCAGCTGTCG
CACAAGTGCGTGCGAACGATAGTAGACAACTTCGAGAGGATACCGGTCTA
CAATGGGGTGCCAGCGAAGTTCTTGTCGGCCATCACCACAAACCTTAGCA
CCTCTCTAGACCCTCAGGTGGCGGCCCTATATGTATTTGACGAAAACTAC
TGGAAGCGGCGATGCGTGGAGCAGCTGGGCTGGTCGGCGTGCCAGCTCAT
AGAGCACGGCCTGACGTGGAAGCAGCTCTTCTTTGAGAATTACGTCGCAC
GCAGCATAGAGGCATTCAAAGCGCCACCGCCGCCAGGTGACGCTCTGCTG
CAGCTGCTGCGCTCGTGCCAGGACTACGTCTTCACGCTGCAAGTGGGGCA
GATGCTGGGGCACCTGGACATGGAGCGCGTGTGCGCGTGCCTGCCCAACC
TCGCGTGCCTGGACCTCACGTACGGCGTCAGGAACATAGGCATGAAGTAC
GAGCGCATGCTGCTCGGCATGAAGATCAGCGACGCGGCGGCGCTCGCGCG
CGCGCTGCCCGCGGCGCCGTGCCTCACGACCCTCGCGCTGCGCGGCGGCC
TCGTCGACGACGACCTGCTGCGTATGCTCGCGGCGGGCCTCGCGCGCGCC
GCGACGCTCACGCACCTCGACCTCTCCCACAACCGCATCGCGGACCACGG
CGCGCGGCTGCTGGCGCGCCTGCTGTGCGGCGGCGGCGGCGGCGGCGGCG
GCGGCGGCGGCGCGCTCACGGCGCTGAGCCTCGCGGACAACGCGATCCGC
GCGGAGGGCGCGCGCCACCTCGGGCGCGCGCTGCGCGAGAACGACGCGCT
GCAGGCGCTGAACCTGCGGCTGAACCGGCTCACGGACGACGGCGGGCGCA
TGCTGCTCGAGGGGCTGCGCGACAACGCGACGCTCACGTCGCTCAACCTC
AGCGGCAACTCGCTCGGGCGCGAGACCGCCGTCGTCCTCGGAGCGCTGCT
GCGCAGCCCCGGCCACGGCCTGCGCGTCCTCGACCTCAGCAGCAACGAGC
TCACGGACGACGACGCGCGCACGCTGCGCGCGGCGCTGGAGGCGCGGCCG
GCCGGCGGCGGCGGCGGCGGCGGCGGCAGCAGCGCCGGCGGCGCTCCCAT
CGTGAGCCTCGACCTGCGCGCCAACCGGCTGTCGGCGGGGCTGGAGGACC
TGGAGGCGATCGAGGCGCGCGTGCACGCCAACGAGCTCGCGGAGCGCGGC
GAGCGCGGCGGTGCGTGA
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