mRNA_14958 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|145062
Unique NamemRNA_14958
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|145062 vs. uniprot
Match: A0A835ZBF0_9STRA (Nucleophile aminohydrolase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBF0_9STRA)

HSP 1 Score: 483 bits (1242), Expect = 3.720e-172
Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 1
Query:    1 MVAALLSCLCSHATAAIADGPYDKAGNVFSPQGKLLQSEYARLAVNRGATCVGMSCSDGTVLAIRKLSQAKTPSLKPERSTRRIYRVGDAVGVLPAGLSADGRFVGATAAELVRRHRASYGEPLSGRVLAVQLGVFLHMLSLERALRPLATSALVACCTEQDCEEAGQGDRSSAQQAAAAAAELWLVDVSGDVQGYVACCVGQHAEAVMERWRTNKYMFDGVTCRQALSEVASLLDECGGSVGAQWE 741
            MVAALLSCLCSHATAAIADGPYDKAGNVFSPQGKLLQSEYARLAVNRGATCVGMSCSDGTVLAIRKLSQAKTPSLKPERSTRRIYRVGDAVGVLPAGLSADGRFVGATAAELVRRHRASYGEPLSGRVLAVQLGVFLHMLSLERALRPLATSALVACCTEQDCEEAGQGDRSSAQQAAAAAAELWLVDVSGDVQGYVACCVGQHAEAVMERWRTNKYMFDGVTCRQALSEVASLLDECGGSVGAQWE
Sbjct:    1 MVAALLSCLCSHATAAIADGPYDKAGNVFSPQGKLLQSEYARLAVNRGATCVGMSCSDGTVLAIRKLSQAKTPSLKPERSTRRIYRVGDAVGVLPAGLSADGRFVGATAAELVRRHRASYGEPLSGRVLAVQLGVFLHMLSLERALRPLATSALVACCTEQDCEEAGQGDRSSAQQAAAAAAELWLVDVSGDVQGYVACCVGQHAEAVMERWRTNKYMFDGVTCRQALSEVASLLDECGGSVGAQWE 247          
BLAST of jgi.p|Trimin1|145062 vs. uniprot
Match: D8LGM2_ECTSI (20S proteasome alpha subunit G n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGM2_ECTSI)

HSP 1 Score: 118 bits (295), Expect = 3.860e-27
Identity = 62/143 (43.36%), Postives = 80/143 (55.94%), Query Frame = 1
Query:   52 ADGPYDKAGNVFSPQGKLLQSEYARLAVNRGATCVGMSCSDGTVLAIRKLSQAKTPSLKPERSTRRIYRVGDAVGVLPAGLSADGRFVGATAAELVRRHRASYGEPLSGRVLAVQLGVFLHMLSLERALRPLATSALVACCTE 480
            A+  YD    VFSP+G+L+Q +Y    V RG  C+G  C DG VL   KL  A    L  +  TRR++RV   +G+LPAGL ADGR +   A E  R HR  YGEP+ GR+LA +LG F+H   +    R    +  VAC  E
Sbjct:   28 AESAYDSNKGVFSPKGRLVQLDYVEGLVKRGNLCIGAECKDGVVLMTNKLVTADAAKLLVDGGTRRVFRVDSHIGILPAGLPADGRALAHKAMEYCRSHRREYGEPIPGRLLAERLGEFIHAACVRWGSRAYPNALFVACWGE 170          
BLAST of jgi.p|Trimin1|145062 vs. uniprot
Match: A0A8H7UPK3_MORIS (Proteasome subunit alpha type n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7UPK3_MORIS)

HSP 1 Score: 98.2 bits (243), Expect = 5.140e-21
Identity = 67/213 (31.46%), Postives = 105/213 (49.30%), Query Frame = 1
Query:   64 YDKAGNVFSPQGKLLQSEYARLAVNRGATCVGMSCSDGTVLAIRKLSQAKTPSLKPERSTRRIYRVGDAVGVLPAGLSADGRFVGATAAELVRRHRASYGEPLSGRVLAVQLGVFLHMLSLERALRPLATSALVACCTEQDCEEAGQGDRSSAQQAAAAAAELWLVDVSGDVQGYVACCVGQHAEAVMERWRTNKYMFDGVTCRQALSEVASL 702
            YD   + +SP G++ Q EYA  AV    T +G+   DG VLA+ KL Q+K   L    S RRI      +G++ AGL ADGR++  +A +     R +Y +P+SG+ +A +LG+F+   +L  ++RPL +  ++A  T  D E                   L +++ SG   GY  C VG+       +    K   D ++ R A+ E A +
Sbjct:    8 YDIYSSTYSPDGRIFQIEYANKAVENSGTAIGLRVKDGVVLAVEKLVQSK---LIVAGSNRRIQSADLHIGIVSAGLQADGRYLVQSARDEASSWRDNYRQPISGKSIADRLGLFVQAHTLYSSVRPLGSGTIIA--TYLDGEPT-----------------LHMIEPSGVYWGYRGCAVGKGKSVA--KTEIEKLKLDELSVRDAVREAARM 196          
BLAST of jgi.p|Trimin1|145062 vs. uniprot
Match: D8RLK8_SELML (PROTEASOME_ALPHA_1 domain-containing protein n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RLK8_SELML)

HSP 1 Score: 97.8 bits (242), Expect = 6.510e-21
Identity = 65/214 (30.37%), Postives = 107/214 (50.00%), Query Frame = 1
Query:   64 YDKAGNVFSPQGKLLQSEYARLAVNRGATCVGMSCSDGTVLAIRKLSQAKTPSLKPERSTRRIYRVGDAVGVLPAGLSADGRFVGATAAELVRRHRASYGEPLSGRVLAVQLGVFLHMLSLERALRPLATSALVACCTEQDCEEAGQGDRSSAQQAAAAAAELWLVDVSGDVQGYVACCVGQHAEAVMERWRTNKYMFDGVTCRQALSEVASLL 705
            YD +   FSP G++ Q+EYA  AV+   T +G++C DG VL I KL+ +K   +  E S +RI+ V +  G+  AGL+ADGR V A A    + + + YGE +    L  ++  ++H+ +L   LRP  T  ++           G  DR   Q        L++++ SG    Y    +G+  +A   +    K     +TC++A+  VA ++
Sbjct:    8 YDLSVTTFSPDGRVFQTEYASKAVDNSGTAIGVTCKDGVVLGIEKLTPSK---MLVEGSNKRIHHVHEHAGMAVAGLAADGRQVVARARAEAKNYLSFYGEEIPTSHLCERVASYVHLCTLYWWLRPFGTGVIL-----------GGYDRDGPQ--------LYMIEPSGVSYRYFGAAIGKGRQAA--KTEIEKLKLSEMTCKEAVFAVAKII 197          
BLAST of jgi.p|Trimin1|145062 vs. uniprot
Match: A0A1X2IM43_9FUNG (Proteasome subunit alpha type n=2 Tax=Absidia repens TaxID=90262 RepID=A0A1X2IM43_9FUNG)

HSP 1 Score: 93.6 bits (231), Expect = 2.480e-19
Identity = 61/217 (28.11%), Postives = 104/217 (47.93%), Query Frame = 1
Query:   64 YDKAGNVFSPQGKLLQSEYARLAVNRGATCVGMSCSDGTVLAIRKLSQAKTPSLKPERSTRRIYRVGDAVGVLPAGLSADGRFVGATAAELVRRHRASYGEPLSGRVLAVQLGVFLHMLSLERALRPLATSALVACCTEQDCEEAGQGDRSSAQQAAAAAAELWLVDVSGDVQGYVACCVGQHAEAVMERWRTNKYMFDGVTCRQALSEVASLLDEC 714
            YD + + +SP G++ Q EYA  AV+   T +G+   DG VL + KL Q+K   L    + RRI      +G++ AGL ADGR +   A +  +  +  Y +P+ G+ +A +LG ++   +L  ++RP     +VA  T+                       L+L++ SG   GY  C VG+       +    K   + +T R+A++E+  ++  C
Sbjct:    8 YDLSVSTYSPDGRVFQVEYANKAVDNSGTAIGLRVKDGVVLGVEKLVQSK---LLVAGANRRIQSADLHIGMVSAGLLADGRHLVKRARDEAQSWKDIYRQPIPGKTIADRLGQYVSAYTLYSSVRPFGLGTIVATMTD-------------------GVPSLYLIEPSGLYWGYRGCAVGKGKSVA--KTEIEKLNLEELTVREAVNEITRIIYTC 200          
BLAST of jgi.p|Trimin1|145062 vs. uniprot
Match: E4XWH0_OIKDI (Proteasome subunit alpha type-3 n=1 Tax=Oikopleura dioica TaxID=34765 RepID=E4XWH0_OIKDI)

HSP 1 Score: 93.2 bits (230), Expect = 3.590e-19
Identity = 62/214 (28.97%), Postives = 98/214 (45.79%), Query Frame = 1
Query:   64 YDKAGNVFSPQGKLLQSEYARLAVNRGATCVGMSCSDGTVLAIRKLSQAKTPSLKPERSTRRIYRVGDAVGVLPAGLSADGRFVGATAAELVRRHRASYGEPLSGRVLAVQLGVFLHMLSLERALRPLATSALVACCTEQDCEEAGQGDRSSAQQAAAAAAELWLVDVSGDVQGYVACCVGQHAEAVMERWRTNKYMFDGVTCRQALSEVASLL 705
            YD + ++FSP G++ Q EYA  AV  GAT VG+ C DG VLA  KL  +   SL       RI+++ D +G+  AGL  D R +     +   + R  +G P+  +VL   +  ++H  +   ++RP   + L++           QG            AELW +D SG   G+     G+       +    K   D +T ++ L E A ++
Sbjct:    8 YDLSADMFSPDGRVFQVEYAMKAVENGATIVGLRCKDGVVLATEKLISS---SLHTAGDNSRIFKIDDHIGMAAAGLLPDARSLTEILRDEATKFRREFGRPIPLKVLCHTVASYVHQYTRHSSIRPFGCTLLLSTFY--------QGK-----------AELWTIDPSGAAFGFKGAAAGKAKNNA--KTEIEKLDLDNLTVKEGLKEAARII 197          
BLAST of jgi.p|Trimin1|145062 vs. uniprot
Match: A0A497I9H8_9ARCH (Proteasome endopeptidase complex, archaeal, alpha subunit n=1 Tax=Nanoarchaeota archaeon TaxID=2026764 RepID=A0A497I9H8_9ARCH)

HSP 1 Score: 92.8 bits (229), Expect = 3.600e-19
Identity = 64/214 (29.91%), Postives = 102/214 (47.66%), Query Frame = 1
Query:   64 YDKAGNVFSPQGKLLQSEYARLAVNRGATCVGMSCSDGTVLAIRKLSQAKTPSLKPERSTRRIYRVGDAVGVLPAGLSADGRFVGATAAELVRRHRASYGEPLSGRVLAVQLGVFLHMLSLERALRPLATSALVACCTEQDCEEAGQGDRSSAQQAAAAAAELWLVDVSGDVQGYVACCVGQHAEAVMERWRTNKYMFDGVTCRQALSEVASLL 705
            YD+A  VFSP G+LLQ EYAR  VN+GAT VG+ C DG VL   K    K   L    S  ++Y++ D +G   AGL +DGR +   A    +R+  +YGEP+    +   +  +    +    +RP   S +V    E                      +L++V++SG    Y A  +G+ A  V+ ++  +KY  + +T ++ +    + L
Sbjct:   10 YDRASTVFSPDGRLLQVEYARKTVNQGATAVGVRCKDGVVLLADKRIVDK---LVVPHSVEKVYKIDDHIGATLAGLVSDGRVLVDKARLTAQRNNLTYGEPVDVITIVKDIADYCQAYTQYGGIRPFGVSLIVGGVNEVP--------------------KLYVVELSGVYFEYKATAIGEGAR-VVNKYLESKYK-ENITVKEGVKLALNAL 198          
BLAST of jgi.p|Trimin1|145062 vs. uniprot
Match: A0A8E2DNP1_9APHY (Proteasome subunit alpha type n=1 Tax=Obba rivulosa TaxID=1052685 RepID=A0A8E2DNP1_9APHY)

HSP 1 Score: 92.8 bits (229), Expect = 4.820e-19
Identity = 62/214 (28.97%), Postives = 107/214 (50.00%), Query Frame = 1
Query:   64 YDKAGNVFSPQGKLLQSEYARLAVNRGATCVGMSCSDGTVLAIRKLSQAKTPSLKPERSTRRIYRVGDAVGVLPAGLSADGRFVGATAAELVRRHRASYGEPLSGRVLAVQLGVFLHMLSLERALRPLATSALVACCTEQDCEEAGQGDRSSAQQAAAAAAELWLVDVSGDVQGYVACCVGQHAEAVMERWRTNKYMFDGVTCRQALSEVASLL 705
            YD + + +SP G++ Q EYA  AV    T +G+   DG VLA+ KL  +K   L PE + RRI  V   VG++ AGL ADGR +   + +    ++ +Y +P+  + LA +LG+++   +L  ++RP   S ++  C     ++ G                L++++ SG   GY    VG+  +  + +    K     +T R+A+ E A ++
Sbjct:    8 YDLSASTYSPDGRIFQVEYANKAVENSGTAIGLRVKDGVVLAVEKLIHSKL--LVPE-ANRRIQTVDRHVGLVSAGLLADGRNLANRSRDEASGYKDTYRQPIPLKFLADRLGMYVQTYTLYSSVRPFGCSTILGAC-----DKTGP--------------TLYIIEPSGVAYGYHGAAVGKGRQ--LAKTELEKIKLSELTMREAVMEAARII 197          
BLAST of jgi.p|Trimin1|145062 vs. uniprot
Match: A0A163J9T9_ABSGL (PROTEASOME_ALPHA_1 domain-containing protein n=1 Tax=Absidia glauca TaxID=4829 RepID=A0A163J9T9_ABSGL)

HSP 1 Score: 94.4 bits (233), Expect = 1.650e-18
Identity = 61/217 (28.11%), Postives = 104/217 (47.93%), Query Frame = 1
Query:   64 YDKAGNVFSPQGKLLQSEYARLAVNRGATCVGMSCSDGTVLAIRKLSQAKTPSLKPERSTRRIYRVGDAVGVLPAGLSADGRFVGATAAELVRRHRASYGEPLSGRVLAVQLGVFLHMLSLERALRPLATSALVACCTEQDCEEAGQGDRSSAQQAAAAAAELWLVDVSGDVQGYVACCVGQHAEAVMERWRTNKYMFDGVTCRQALSEVASLLDEC 714
            YD + + +SP G++ Q EYA  AV+   T +G+   DG VL + KL Q+K   L    + RRI      +G++ AGL ADGR +   A +  +  +  Y +P+ G+ +A +LG ++   +L  ++RP   S +V   T+                       L++++ SG   GY  C VG+       +    K   D +T  +A++E+A ++  C
Sbjct:    8 YDLSVSTYSPDGRVFQVEYANKAVDNSGTAIGLRVKDGVVLGVEKLVQSK---LLVAGANRRIQSADLHIGMVSAGLVADGRHLVKRARDEAQSWKDIYRQPIPGKTIADRLGQYVSAYTLYSSVRPFGLSTIVGTMTD-------------------GVPSLYMIEPSGLYWGYRGCAVGKGKSVA--KTEIEKLKLDEMTVYEAVNEIARIIHTC 200          
BLAST of jgi.p|Trimin1|145062 vs. uniprot
Match: A0A7R9BC87_9CRUS (Proteasome subunit alpha type n=1 Tax=Notodromas monacha TaxID=399045 RepID=A0A7R9BC87_9CRUS)

HSP 1 Score: 91.3 bits (225), Expect = 1.920e-18
Identity = 61/214 (28.50%), Postives = 102/214 (47.66%), Query Frame = 1
Query:   64 YDKAGNVFSPQGKLLQSEYARLAVNRGATCVGMSCSDGTVLAIRKLSQAKTPSLKPERSTRRIYRVGDAVGVLPAGLSADGRFVGATAAELVRRHRASYGEPLSGRVLAVQLGVFLHMLSLERALRPLATSALVACCTEQDCEEAGQGDRSSAQQAAAAAAELWLVDVSGDVQGYVACCVGQHAEAVMERWRTNKYMFDGVTCRQALSEVASLL 705
            YD + + FSP G++ Q EYA+ AV    T + M   DG V A+ KL  +K   L    + RRI+ VG+ VG+  AGL AD R +  TA +     +++YG  +  R L  ++ +++H  +L  A+RP     ++    E D                    +L++VD SG   GY  C +G+  ++   +    K     + C++ + E A ++
Sbjct:    8 YDLSASQFSPDGRVFQVEYAQKAVENSGTAIAMCGKDGVVFAVEKLVTSK---LYEAGANRRIFHVGEHVGIAIAGLLADARQLVETARKETADFKSNYGTVIPLRYLTDRVAMYMHAYTLYSAVRPYGAGLMLGS-VEPD------------------GPKLYVVDPSGVYHGYTGCAMGKAKQSA--KTELEKLKIGDMFCKELVKEAAKII 197          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|145062 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZBF0_9STRA3.720e-172100.00Nucleophile aminohydrolase (Fragment) n=1 Tax=Trib... [more]
D8LGM2_ECTSI3.860e-2743.3620S proteasome alpha subunit G n=2 Tax=Ectocarpus ... [more]
A0A8H7UPK3_MORIS5.140e-2131.46Proteasome subunit alpha type n=1 Tax=Mortierella ... [more]
D8RLK8_SELML6.510e-2130.37PROTEASOME_ALPHA_1 domain-containing protein n=1 T... [more]
A0A1X2IM43_9FUNG2.480e-1928.11Proteasome subunit alpha type n=2 Tax=Absidia repe... [more]
E4XWH0_OIKDI3.590e-1928.97Proteasome subunit alpha type-3 n=1 Tax=Oikopleura... [more]
A0A497I9H8_9ARCH3.600e-1929.91Proteasome endopeptidase complex, archaeal, alpha ... [more]
A0A8E2DNP1_9APHY4.820e-1928.97Proteasome subunit alpha type n=1 Tax=Obba rivulos... [more]
A0A163J9T9_ABSGL1.650e-1828.11PROTEASOME_ALPHA_1 domain-containing protein n=1 T... [more]
A0A7R9BC87_9CRUS1.920e-1828.50Proteasome subunit alpha type n=1 Tax=Notodromas m... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_135contigContig_135:184283..185023 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|145062|gw1.135.30.1
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko03051
KEGG ModuleM00337,M00340
KEGG Pathwayko03050,map03050
KEGG koko:K02727
EC3.4.25.1
GOsGO:0000502,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005773,GO:0005774,GO:0005829,GO:0005839,GO:0006508,GO:0006511,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009266,GO:0009409,GO:0009628,GO:0009987,GO:0010035,GO:0010038,GO:0010498,GO:0010499,GO:0012505,GO:0016020,GO:0019538,GO:0019773,GO:0019941,GO:0030163,GO:0031090,GO:0031597,GO:0032991,GO:0034515,GO:0042175,GO:0042221,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044437,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046686,GO:0048046,GO:0050896,GO:0051603,GO:0071704,GO:0097159,GO:0098588,GO:0098805,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1905368,GO:1905369
Preferred namePAG1
DescriptionThe proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH
COG categoryO
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0638@1|root,KOG0184@2759|Eukaryota
Evalue6.33e-28
Seed ortholog2880.D8LGM2
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionNucleophile aminohydrolases, N-terminal
Ec32 orthologEc-10_002750.1
TranscriptId145384
TrackFilteredModels1
ProteinId145062
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|145062gene_14958Tribonema minus UTEX_B_3156 geneContig_135 184283..185023 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_14958_1exon_14958_1Tribonema minus UTEX_B_3156 exonContig_135 184283..185023 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_14958CDS_14958Tribonema minus UTEX_B_3156 CDSContig_135 184283..185023 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|145062Trimin1|145062|gw1.135.30.1Tribonema minus UTEX_B_3156 polypeptideContig_135 184283..185023 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_14958 ID=mRNA_14958|Name=jgi.p|Trimin1|145062|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=741bp|location=Sequence derived from alignment at Contig_135:184283..185023+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGTAGCTGCGCTGCTGAGCTGCCTTTGCAGCCATGCCACCGCTGCCAT
TGCGGACGGCCCATACGACAAAGCCGGCAATGTGTTCAGCCCTCAGGGGA
AGCTGCTGCAGTCAGAGTACGCGCGTCTGGCGGTCAACCGTGGGGCCACC
TGCGTCGGCATGAGCTGCAGCGACGGCACGGTGCTGGCGATACGCAAGCT
CTCACAGGCTAAGACACCCAGCTTGAAGCCAGAACGATCCACTCGACGCA
TTTACAGAGTCGGCGATGCTGTTGGCGTACTACCAGCAGGGCTTTCAGCT
GACGGCCGTTTTGTTGGAGCCACTGCTGCGGAGCTGGTCAGGCGGCACAG
AGCATCGTACGGTGAGCCACTCAGCGGGCGTGTGCTGGCGGTGCAACTGG
GGGTGTTCCTTCACATGCTGTCGCTCGAGCGGGCGCTGAGGCCTCTGGCC
ACCTCGGCCCTGGTGGCTTGCTGCACGGAGCAAGACTGCGAAGAGGCAGG
ACAAGGCGACAGAAGCAGCGCCCAACAAGCAGCCGCCGCAGCGGCAGAGC
TTTGGCTGGTGGATGTGTCGGGCGATGTGCAGGGGTACGTTGCATGCTGC
GTGGGGCAACACGCAGAGGCTGTAATGGAGCGCTGGCGGACCAATAAGTA
CATGTTCGATGGCGTCACATGTAGGCAAGCGCTGTCAGAAGTCGCGTCGC
TCCTAGACGAGTGCGGTGGGAGCGTGGGCGCGCAGTGGGAG
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protein sequence of jgi.p|Trimin1|145062

>Trimin1|145062|gw1.135.30.1 ID=Trimin1|145062|gw1.135.30.1|Name=jgi.p|Trimin1|145062|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=247bp
MVAALLSCLCSHATAAIADGPYDKAGNVFSPQGKLLQSEYARLAVNRGAT
CVGMSCSDGTVLAIRKLSQAKTPSLKPERSTRRIYRVGDAVGVLPAGLSA
DGRFVGATAAELVRRHRASYGEPLSGRVLAVQLGVFLHMLSLERALRPLA
TSALVACCTEQDCEEAGQGDRSSAQQAAAAAAELWLVDVSGDVQGYVACC
VGQHAEAVMERWRTNKYMFDGVTCRQALSEVASLLDECGGSVGAQWE
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mRNA from alignment at Contig_135:184283..185023+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_14958 ID=mRNA_14958|Name=jgi.p|Trimin1|145062|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=741bp|location=Sequence derived from alignment at Contig_135:184283..185023+ (Tribonema minus UTEX_B_3156 )
ATGGTAGCTGCGCTGCTGAGCTGCCTTTGCAGCCATGCCACCGCTGCCAT TGCGGACGGCCCATACGACAAAGCCGGCAATGTGTTCAGCCCTCAGGGGA AGCTGCTGCAGTCAGAGTACGCGCGTCTGGCGGTCAACCGTGGGGCCACC TGCGTCGGCATGAGCTGCAGCGACGGCACGGTGCTGGCGATACGCAAGCT CTCACAGGCTAAGACACCCAGCTTGAAGCCAGAACGATCCACTCGACGCA TTTACAGAGTCGGCGATGCTGTTGGCGTACTACCAGCAGGGCTTTCAGCT GACGGCCGTTTTGTTGGAGCCACTGCTGCGGAGCTGGTCAGGCGGCACAG AGCATCGTACGGTGAGCCACTCAGCGGGCGTGTGCTGGCGGTGCAACTGG GGGTGTTCCTTCACATGCTGTCGCTCGAGCGGGCGCTGAGGCCTCTGGCC ACCTCGGCCCTGGTGGCTTGCTGCACGGAGCAAGACTGCGAAGAGGCAGG ACAAGGCGACAGAAGCAGCGCCCAACAAGCAGCCGCCGCAGCGGCAGAGC TTTGGCTGGTGGATGTGTCGGGCGATGTGCAGGGGTACGTTGCATGCTGC GTGGGGCAACACGCAGAGGCTGTAATGGAGCGCTGGCGGACCAATAAGTA CATGTTCGATGGCGTCACATGTAGGCAAGCGCTGTCAGAAGTCGCGTCGC TCCTAGACGAGTGCGGTGGGAGCGTGGGCGCGCAGTGGGAG
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Coding sequence (CDS) from alignment at Contig_135:184283..185023+

>mRNA_14958 ID=mRNA_14958|Name=jgi.p|Trimin1|145062|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=741bp|location=Sequence derived from alignment at Contig_135:184283..185023+ (Tribonema minus UTEX_B_3156 )
ATGGTAGCTGCGCTGCTGAGCTGCCTTTGCAGCCATGCCACCGCTGCCAT
TGCGGACGGCCCATACGACAAAGCCGGCAATGTGTTCAGCCCTCAGGGGA
AGCTGCTGCAGTCAGAGTACGCGCGTCTGGCGGTCAACCGTGGGGCCACC
TGCGTCGGCATGAGCTGCAGCGACGGCACGGTGCTGGCGATACGCAAGCT
CTCACAGGCTAAGACACCCAGCTTGAAGCCAGAACGATCCACTCGACGCA
TTTACAGAGTCGGCGATGCTGTTGGCGTACTACCAGCAGGGCTTTCAGCT
GACGGCCGTTTTGTTGGAGCCACTGCTGCGGAGCTGGTCAGGCGGCACAG
AGCATCGTACGGTGAGCCACTCAGCGGGCGTGTGCTGGCGGTGCAACTGG
GGGTGTTCCTTCACATGCTGTCGCTCGAGCGGGCGCTGAGGCCTCTGGCC
ACCTCGGCCCTGGTGGCTTGCTGCACGGAGCAAGACTGCGAAGAGGCAGG
ACAAGGCGACAGAAGCAGCGCCCAACAAGCAGCCGCCGCAGCGGCAGAGC
TTTGGCTGGTGGATGTGTCGGGCGATGTGCAGGGGTACGTTGCATGCTGC
GTGGGGCAACACGCAGAGGCTGTAATGGAGCGCTGGCGGACCAATAAGTA
CATGTTCGATGGCGTCACATGTAGGCAAGCGCTGTCAGAAGTCGCGTCGC
TCCTAGACGAGTGCGGTGGGAGCGTGGGCGCGCAGTGGGAG
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