mRNA_14958 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|145062 vs. uniprot
Match: A0A835ZBF0_9STRA (Nucleophile aminohydrolase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBF0_9STRA) HSP 1 Score: 483 bits (1242), Expect = 3.720e-172 Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 1 Query: 1 MVAALLSCLCSHATAAIADGPYDKAGNVFSPQGKLLQSEYARLAVNRGATCVGMSCSDGTVLAIRKLSQAKTPSLKPERSTRRIYRVGDAVGVLPAGLSADGRFVGATAAELVRRHRASYGEPLSGRVLAVQLGVFLHMLSLERALRPLATSALVACCTEQDCEEAGQGDRSSAQQAAAAAAELWLVDVSGDVQGYVACCVGQHAEAVMERWRTNKYMFDGVTCRQALSEVASLLDECGGSVGAQWE 741 MVAALLSCLCSHATAAIADGPYDKAGNVFSPQGKLLQSEYARLAVNRGATCVGMSCSDGTVLAIRKLSQAKTPSLKPERSTRRIYRVGDAVGVLPAGLSADGRFVGATAAELVRRHRASYGEPLSGRVLAVQLGVFLHMLSLERALRPLATSALVACCTEQDCEEAGQGDRSSAQQAAAAAAELWLVDVSGDVQGYVACCVGQHAEAVMERWRTNKYMFDGVTCRQALSEVASLLDECGGSVGAQWE Sbjct: 1 MVAALLSCLCSHATAAIADGPYDKAGNVFSPQGKLLQSEYARLAVNRGATCVGMSCSDGTVLAIRKLSQAKTPSLKPERSTRRIYRVGDAVGVLPAGLSADGRFVGATAAELVRRHRASYGEPLSGRVLAVQLGVFLHMLSLERALRPLATSALVACCTEQDCEEAGQGDRSSAQQAAAAAAELWLVDVSGDVQGYVACCVGQHAEAVMERWRTNKYMFDGVTCRQALSEVASLLDECGGSVGAQWE 247
BLAST of jgi.p|Trimin1|145062 vs. uniprot
Match: D8LGM2_ECTSI (20S proteasome alpha subunit G n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGM2_ECTSI) HSP 1 Score: 118 bits (295), Expect = 3.860e-27 Identity = 62/143 (43.36%), Postives = 80/143 (55.94%), Query Frame = 1 Query: 52 ADGPYDKAGNVFSPQGKLLQSEYARLAVNRGATCVGMSCSDGTVLAIRKLSQAKTPSLKPERSTRRIYRVGDAVGVLPAGLSADGRFVGATAAELVRRHRASYGEPLSGRVLAVQLGVFLHMLSLERALRPLATSALVACCTE 480 A+ YD VFSP+G+L+Q +Y V RG C+G C DG VL KL A L + TRR++RV +G+LPAGL ADGR + A E R HR YGEP+ GR+LA +LG F+H + R + VAC E Sbjct: 28 AESAYDSNKGVFSPKGRLVQLDYVEGLVKRGNLCIGAECKDGVVLMTNKLVTADAAKLLVDGGTRRVFRVDSHIGILPAGLPADGRALAHKAMEYCRSHRREYGEPIPGRLLAERLGEFIHAACVRWGSRAYPNALFVACWGE 170
BLAST of jgi.p|Trimin1|145062 vs. uniprot
Match: A0A8H7UPK3_MORIS (Proteasome subunit alpha type n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7UPK3_MORIS) HSP 1 Score: 98.2 bits (243), Expect = 5.140e-21 Identity = 67/213 (31.46%), Postives = 105/213 (49.30%), Query Frame = 1 Query: 64 YDKAGNVFSPQGKLLQSEYARLAVNRGATCVGMSCSDGTVLAIRKLSQAKTPSLKPERSTRRIYRVGDAVGVLPAGLSADGRFVGATAAELVRRHRASYGEPLSGRVLAVQLGVFLHMLSLERALRPLATSALVACCTEQDCEEAGQGDRSSAQQAAAAAAELWLVDVSGDVQGYVACCVGQHAEAVMERWRTNKYMFDGVTCRQALSEVASL 702 YD + +SP G++ Q EYA AV T +G+ DG VLA+ KL Q+K L S RRI +G++ AGL ADGR++ +A + R +Y +P+SG+ +A +LG+F+ +L ++RPL + ++A T D E L +++ SG GY C VG+ + K D ++ R A+ E A + Sbjct: 8 YDIYSSTYSPDGRIFQIEYANKAVENSGTAIGLRVKDGVVLAVEKLVQSK---LIVAGSNRRIQSADLHIGIVSAGLQADGRYLVQSARDEASSWRDNYRQPISGKSIADRLGLFVQAHTLYSSVRPLGSGTIIA--TYLDGEPT-----------------LHMIEPSGVYWGYRGCAVGKGKSVA--KTEIEKLKLDELSVRDAVREAARM 196
BLAST of jgi.p|Trimin1|145062 vs. uniprot
Match: D8RLK8_SELML (PROTEASOME_ALPHA_1 domain-containing protein n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RLK8_SELML) HSP 1 Score: 97.8 bits (242), Expect = 6.510e-21 Identity = 65/214 (30.37%), Postives = 107/214 (50.00%), Query Frame = 1 Query: 64 YDKAGNVFSPQGKLLQSEYARLAVNRGATCVGMSCSDGTVLAIRKLSQAKTPSLKPERSTRRIYRVGDAVGVLPAGLSADGRFVGATAAELVRRHRASYGEPLSGRVLAVQLGVFLHMLSLERALRPLATSALVACCTEQDCEEAGQGDRSSAQQAAAAAAELWLVDVSGDVQGYVACCVGQHAEAVMERWRTNKYMFDGVTCRQALSEVASLL 705 YD + FSP G++ Q+EYA AV+ T +G++C DG VL I KL+ +K + E S +RI+ V + G+ AGL+ADGR V A A + + + YGE + L ++ ++H+ +L LRP T ++ G DR Q L++++ SG Y +G+ +A + K +TC++A+ VA ++ Sbjct: 8 YDLSVTTFSPDGRVFQTEYASKAVDNSGTAIGVTCKDGVVLGIEKLTPSK---MLVEGSNKRIHHVHEHAGMAVAGLAADGRQVVARARAEAKNYLSFYGEEIPTSHLCERVASYVHLCTLYWWLRPFGTGVIL-----------GGYDRDGPQ--------LYMIEPSGVSYRYFGAAIGKGRQAA--KTEIEKLKLSEMTCKEAVFAVAKII 197
BLAST of jgi.p|Trimin1|145062 vs. uniprot
Match: A0A1X2IM43_9FUNG (Proteasome subunit alpha type n=2 Tax=Absidia repens TaxID=90262 RepID=A0A1X2IM43_9FUNG) HSP 1 Score: 93.6 bits (231), Expect = 2.480e-19 Identity = 61/217 (28.11%), Postives = 104/217 (47.93%), Query Frame = 1 Query: 64 YDKAGNVFSPQGKLLQSEYARLAVNRGATCVGMSCSDGTVLAIRKLSQAKTPSLKPERSTRRIYRVGDAVGVLPAGLSADGRFVGATAAELVRRHRASYGEPLSGRVLAVQLGVFLHMLSLERALRPLATSALVACCTEQDCEEAGQGDRSSAQQAAAAAAELWLVDVSGDVQGYVACCVGQHAEAVMERWRTNKYMFDGVTCRQALSEVASLLDEC 714 YD + + +SP G++ Q EYA AV+ T +G+ DG VL + KL Q+K L + RRI +G++ AGL ADGR + A + + + Y +P+ G+ +A +LG ++ +L ++RP +VA T+ L+L++ SG GY C VG+ + K + +T R+A++E+ ++ C Sbjct: 8 YDLSVSTYSPDGRVFQVEYANKAVDNSGTAIGLRVKDGVVLGVEKLVQSK---LLVAGANRRIQSADLHIGMVSAGLLADGRHLVKRARDEAQSWKDIYRQPIPGKTIADRLGQYVSAYTLYSSVRPFGLGTIVATMTD-------------------GVPSLYLIEPSGLYWGYRGCAVGKGKSVA--KTEIEKLNLEELTVREAVNEITRIIYTC 200
BLAST of jgi.p|Trimin1|145062 vs. uniprot
Match: E4XWH0_OIKDI (Proteasome subunit alpha type-3 n=1 Tax=Oikopleura dioica TaxID=34765 RepID=E4XWH0_OIKDI) HSP 1 Score: 93.2 bits (230), Expect = 3.590e-19 Identity = 62/214 (28.97%), Postives = 98/214 (45.79%), Query Frame = 1 Query: 64 YDKAGNVFSPQGKLLQSEYARLAVNRGATCVGMSCSDGTVLAIRKLSQAKTPSLKPERSTRRIYRVGDAVGVLPAGLSADGRFVGATAAELVRRHRASYGEPLSGRVLAVQLGVFLHMLSLERALRPLATSALVACCTEQDCEEAGQGDRSSAQQAAAAAAELWLVDVSGDVQGYVACCVGQHAEAVMERWRTNKYMFDGVTCRQALSEVASLL 705 YD + ++FSP G++ Q EYA AV GAT VG+ C DG VLA KL + SL RI+++ D +G+ AGL D R + + + R +G P+ +VL + ++H + ++RP + L++ QG AELW +D SG G+ G+ + K D +T ++ L E A ++ Sbjct: 8 YDLSADMFSPDGRVFQVEYAMKAVENGATIVGLRCKDGVVLATEKLISS---SLHTAGDNSRIFKIDDHIGMAAAGLLPDARSLTEILRDEATKFRREFGRPIPLKVLCHTVASYVHQYTRHSSIRPFGCTLLLSTFY--------QGK-----------AELWTIDPSGAAFGFKGAAAGKAKNNA--KTEIEKLDLDNLTVKEGLKEAARII 197
BLAST of jgi.p|Trimin1|145062 vs. uniprot
Match: A0A497I9H8_9ARCH (Proteasome endopeptidase complex, archaeal, alpha subunit n=1 Tax=Nanoarchaeota archaeon TaxID=2026764 RepID=A0A497I9H8_9ARCH) HSP 1 Score: 92.8 bits (229), Expect = 3.600e-19 Identity = 64/214 (29.91%), Postives = 102/214 (47.66%), Query Frame = 1 Query: 64 YDKAGNVFSPQGKLLQSEYARLAVNRGATCVGMSCSDGTVLAIRKLSQAKTPSLKPERSTRRIYRVGDAVGVLPAGLSADGRFVGATAAELVRRHRASYGEPLSGRVLAVQLGVFLHMLSLERALRPLATSALVACCTEQDCEEAGQGDRSSAQQAAAAAAELWLVDVSGDVQGYVACCVGQHAEAVMERWRTNKYMFDGVTCRQALSEVASLL 705 YD+A VFSP G+LLQ EYAR VN+GAT VG+ C DG VL K K L S ++Y++ D +G AGL +DGR + A +R+ +YGEP+ + + + + +RP S +V E +L++V++SG Y A +G+ A V+ ++ +KY + +T ++ + + L Sbjct: 10 YDRASTVFSPDGRLLQVEYARKTVNQGATAVGVRCKDGVVLLADKRIVDK---LVVPHSVEKVYKIDDHIGATLAGLVSDGRVLVDKARLTAQRNNLTYGEPVDVITIVKDIADYCQAYTQYGGIRPFGVSLIVGGVNEVP--------------------KLYVVELSGVYFEYKATAIGEGAR-VVNKYLESKYK-ENITVKEGVKLALNAL 198
BLAST of jgi.p|Trimin1|145062 vs. uniprot
Match: A0A8E2DNP1_9APHY (Proteasome subunit alpha type n=1 Tax=Obba rivulosa TaxID=1052685 RepID=A0A8E2DNP1_9APHY) HSP 1 Score: 92.8 bits (229), Expect = 4.820e-19 Identity = 62/214 (28.97%), Postives = 107/214 (50.00%), Query Frame = 1 Query: 64 YDKAGNVFSPQGKLLQSEYARLAVNRGATCVGMSCSDGTVLAIRKLSQAKTPSLKPERSTRRIYRVGDAVGVLPAGLSADGRFVGATAAELVRRHRASYGEPLSGRVLAVQLGVFLHMLSLERALRPLATSALVACCTEQDCEEAGQGDRSSAQQAAAAAAELWLVDVSGDVQGYVACCVGQHAEAVMERWRTNKYMFDGVTCRQALSEVASLL 705 YD + + +SP G++ Q EYA AV T +G+ DG VLA+ KL +K L PE + RRI V VG++ AGL ADGR + + + ++ +Y +P+ + LA +LG+++ +L ++RP S ++ C ++ G L++++ SG GY VG+ + + + K +T R+A+ E A ++ Sbjct: 8 YDLSASTYSPDGRIFQVEYANKAVENSGTAIGLRVKDGVVLAVEKLIHSKL--LVPE-ANRRIQTVDRHVGLVSAGLLADGRNLANRSRDEASGYKDTYRQPIPLKFLADRLGMYVQTYTLYSSVRPFGCSTILGAC-----DKTGP--------------TLYIIEPSGVAYGYHGAAVGKGRQ--LAKTELEKIKLSELTMREAVMEAARII 197
BLAST of jgi.p|Trimin1|145062 vs. uniprot
Match: A0A163J9T9_ABSGL (PROTEASOME_ALPHA_1 domain-containing protein n=1 Tax=Absidia glauca TaxID=4829 RepID=A0A163J9T9_ABSGL) HSP 1 Score: 94.4 bits (233), Expect = 1.650e-18 Identity = 61/217 (28.11%), Postives = 104/217 (47.93%), Query Frame = 1 Query: 64 YDKAGNVFSPQGKLLQSEYARLAVNRGATCVGMSCSDGTVLAIRKLSQAKTPSLKPERSTRRIYRVGDAVGVLPAGLSADGRFVGATAAELVRRHRASYGEPLSGRVLAVQLGVFLHMLSLERALRPLATSALVACCTEQDCEEAGQGDRSSAQQAAAAAAELWLVDVSGDVQGYVACCVGQHAEAVMERWRTNKYMFDGVTCRQALSEVASLLDEC 714 YD + + +SP G++ Q EYA AV+ T +G+ DG VL + KL Q+K L + RRI +G++ AGL ADGR + A + + + Y +P+ G+ +A +LG ++ +L ++RP S +V T+ L++++ SG GY C VG+ + K D +T +A++E+A ++ C Sbjct: 8 YDLSVSTYSPDGRVFQVEYANKAVDNSGTAIGLRVKDGVVLGVEKLVQSK---LLVAGANRRIQSADLHIGMVSAGLVADGRHLVKRARDEAQSWKDIYRQPIPGKTIADRLGQYVSAYTLYSSVRPFGLSTIVGTMTD-------------------GVPSLYMIEPSGLYWGYRGCAVGKGKSVA--KTEIEKLKLDEMTVYEAVNEIARIIHTC 200
BLAST of jgi.p|Trimin1|145062 vs. uniprot
Match: A0A7R9BC87_9CRUS (Proteasome subunit alpha type n=1 Tax=Notodromas monacha TaxID=399045 RepID=A0A7R9BC87_9CRUS) HSP 1 Score: 91.3 bits (225), Expect = 1.920e-18 Identity = 61/214 (28.50%), Postives = 102/214 (47.66%), Query Frame = 1 Query: 64 YDKAGNVFSPQGKLLQSEYARLAVNRGATCVGMSCSDGTVLAIRKLSQAKTPSLKPERSTRRIYRVGDAVGVLPAGLSADGRFVGATAAELVRRHRASYGEPLSGRVLAVQLGVFLHMLSLERALRPLATSALVACCTEQDCEEAGQGDRSSAQQAAAAAAELWLVDVSGDVQGYVACCVGQHAEAVMERWRTNKYMFDGVTCRQALSEVASLL 705 YD + + FSP G++ Q EYA+ AV T + M DG V A+ KL +K L + RRI+ VG+ VG+ AGL AD R + TA + +++YG + R L ++ +++H +L A+RP ++ E D +L++VD SG GY C +G+ ++ + K + C++ + E A ++ Sbjct: 8 YDLSASQFSPDGRVFQVEYAQKAVENSGTAIAMCGKDGVVFAVEKLVTSK---LYEAGANRRIFHVGEHVGIAIAGLLADARQLVETARKETADFKSNYGTVIPLRYLTDRVAMYMHAYTLYSAVRPYGAGLMLGS-VEPD------------------GPKLYVVDPSGVYHGYTGCAMGKAKQSA--KTELEKLKIGDMFCKELVKEAAKII 197 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|145062 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_14958 ID=mRNA_14958|Name=jgi.p|Trimin1|145062|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=741bp|location=Sequence derived from alignment at Contig_135:184283..185023+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGTAGCTGCGCTGCTGAGCTGCCTTTGCAGCCATGCCACCGCTGCCATback to top protein sequence of jgi.p|Trimin1|145062 >Trimin1|145062|gw1.135.30.1 ID=Trimin1|145062|gw1.135.30.1|Name=jgi.p|Trimin1|145062|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=247bp MVAALLSCLCSHATAAIADGPYDKAGNVFSPQGKLLQSEYARLAVNRGATback to top mRNA from alignment at Contig_135:184283..185023+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_14958 ID=mRNA_14958|Name=jgi.p|Trimin1|145062|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=741bp|location=Sequence derived from alignment at Contig_135:184283..185023+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_135:184283..185023+ >mRNA_14958 ID=mRNA_14958|Name=jgi.p|Trimin1|145062|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=741bp|location=Sequence derived from alignment at Contig_135:184283..185023+ (Tribonema minus UTEX_B_3156 )back to top |