mRNA_14930 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|351724
Unique NamemRNA_14930
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|351724 vs. uniprot
Match: A0A835YGB0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGB0_9STRA)

HSP 1 Score: 266 bits (680), Expect = 6.190e-85
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1
Query:    1 MMLAGLPTGITVIMVAKRAAFLLLLLPHSLMAAPLDALQLQADSGGWPPPPCRHGSRRLYSTRGRESDXXXXXXXXXXARGAAEPAASAVMFCCNQHDLVAPDAYIENHPACTPHLAPALAGPAARRLQAEAIVARTTVTRQPTARPTS 447
            MMLAGLPTGITVIMVAKRAAFLLLLLPHSLMAAPLDALQLQADSGGWPPPPCRHGSRRLYSTRGRESDXXXXXXXXXXARGAAEPAASAVMFCCNQHDLVAPDAYIENHPACTPHLAPALAGPAARRLQAEAIVARTTVTRQPTARPTS
Sbjct:    1 MMLAGLPTGITVIMVAKRAAFLLLLLPHSLMAAPLDALQLQADSGGWPPPPCRHGSRRLYSTRGRESDXXXXXXXXXXARGAAEPAASAVMFCCNQHDLVAPDAYIENHPACTPHLAPALAGPAARRLQAEAIVARTTVTRQPTARPTS 149          
BLAST of jgi.p|Trimin1|351724 vs. uniprot
Match: A0A835YR52_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR52_9STRA)

HSP 1 Score: 142 bits (357), Expect = 4.830e-34
Identity = 78/112 (69.64%), Postives = 82/112 (73.21%), Query Frame = 1
Query:   76 LPHSLMAAPLDALQLQADSGGWPPPPCRHGSRRLY---STRGRESDXXXXXXXXXX-ARGAAEPA-ASAVMFCCNQHDLVAPDAYIENHPACTPHLAPALAGPAARRLQAEA 396
            LPH LMAAP DALQ QADSG WPPPPCR   R L    STR  +S+           ARG AEP  A+AV FCCNQHDLVAPDAYIE+HPACTPHLAPALAGPAARRLQA A
Sbjct:   88 LPHGLMAAPSDALQRQADSGNWPPPPCRRSGRALNDSDSTRAHDSESKTGSATGNNGARGVAEPVPAAAVTFCCNQHDLVAPDAYIEDHPACTPHLAPALAGPAARRLQAAA 199          
BLAST of jgi.p|Trimin1|351724 vs. uniprot
Match: A0A835YJU6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJU6_9STRA)

HSP 1 Score: 961 bits (2484), Expect = 0.000e+0
Identity = 595/595 (100.00%), Postives = 595/595 (100.00%), Query Frame = 1
Query:    1 MSLVRFLCQMLTLCPAVATAXXXXXXXLLSLHVDGVALAKRSRSASGVAALRTVXXXXXXXXXXXXXXXXXXXXXXXSDRXXXSVLHVQLDDMRPRARFPVVMQPVDSGYNSHMRRRDXXXXXXXXXXXXVPPAIPFVCIQYEREVATLGMPHFKSFEVALQQCCVRVDVDFVLHILSIATRVLPEFTDSAVLDKIAAAKQALRHTLTAPARHDHSLVYLEMFRHAPIAVQLELYVGQRALSLETTPAIEDTDAARSMLAHEDLDAAAQAHALPFYRKISLTFNKTLANEDPDAAGGLAVLGGSFLSAVGVLGGTLARISPTFVFDELLVTHYFGSARELAAALARGLVQQGVAQGYKXXXXXXXXXXXXXXXXXXXPGSERSYKVVGSMELLGDPLALVNKLSDSVLQFLRTTQAEFRGEEPTFGAGARMLVSGVVGGAFGSAAKIAGSLEDVIRGLSGTEVADAEGGGDTRVRHLKHGFQRGGQXXXXXXXXVLYDSIQQGISGLVDRPMEGAKEEGVAGFLTGMAKGIVVAVAAPVAGALGAVSKVTEGVDASTRYRQLERMGRRREPRSAQPGCPLAVLTRDMMAANLRIV 1785
            MSLVRFLCQMLTLCPAVATAXXXXXXXLLSLHVDGVALAKRSRSASGVAALRTVXXXXXXXXXXXXXXXXXXXXXXXSDRXXXSVLHVQLDDMRPRARFPVVMQPVDSGYNSHMRRRDXXXXXXXXXXXXVPPAIPFVCIQYEREVATLGMPHFKSFEVALQQCCVRVDVDFVLHILSIATRVLPEFTDSAVLDKIAAAKQALRHTLTAPARHDHSLVYLEMFRHAPIAVQLELYVGQRALSLETTPAIEDTDAARSMLAHEDLDAAAQAHALPFYRKISLTFNKTLANEDPDAAGGLAVLGGSFLSAVGVLGGTLARISPTFVFDELLVTHYFGSARELAAALARGLVQQGVAQGYKXXXXXXXXXXXXXXXXXXXPGSERSYKVVGSMELLGDPLALVNKLSDSVLQFLRTTQAEFRGEEPTFGAGARMLVSGVVGGAFGSAAKIAGSLEDVIRGLSGTEVADAEGGGDTRVRHLKHGFQRGGQXXXXXXXXVLYDSIQQGISGLVDRPMEGAKEEGVAGFLTGMAKGIVVAVAAPVAGALGAVSKVTEGVDASTRYRQLERMGRRREPRSAQPGCPLAVLTRDMMAANLRIV
Sbjct:    1 MSLVRFLCQMLTLCPAVATAXXXXXXXLLSLHVDGVALAKRSRSASGVAALRTVXXXXXXXXXXXXXXXXXXXXXXXSDRXXXSVLHVQLDDMRPRARFPVVMQPVDSGYNSHMRRRDXXXXXXXXXXXXVPPAIPFVCIQYEREVATLGMPHFKSFEVALQQCCVRVDVDFVLHILSIATRVLPEFTDSAVLDKIAAAKQALRHTLTAPARHDHSLVYLEMFRHAPIAVQLELYVGQRALSLETTPAIEDTDAARSMLAHEDLDAAAQAHALPFYRKISLTFNKTLANEDPDAAGGLAVLGGSFLSAVGVLGGTLARISPTFVFDELLVTHYFGSARELAAALARGLVQQGVAQGYKXXXXXXXXXXXXXXXXXXXPGSERSYKVVGSMELLGDPLALVNKLSDSVLQFLRTTQAEFRGEEPTFGAGARMLVSGVVGGAFGSAAKIAGSLEDVIRGLSGTEVADAEGGGDTRVRHLKHGFQRGGQXXXXXXXXVLYDSIQQGISGLVDRPMEGAKEEGVAGFLTGMAKGIVVAVAAPVAGALGAVSKVTEGVDASTRYRQLERMGRRREPRSAQPGCPLAVLTRDMMAANLRIV 595          
BLAST of jgi.p|Trimin1|351724 vs. uniprot
Match: D7G2C7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2C7_ECTSI)

HSP 1 Score: 366 bits (940), Expect = 9.880e-107
Identity = 231/506 (45.65%), Postives = 295/506 (58.30%), Query Frame = 1
Query:  253 VLHVQLDDMRPRARFPVVMQPVDSGYNSHMRRRDXXXXXXXXXXXXVPPAIPFVCIQYEREVATLGMPHFKSFEVALQQCCVRVDVDFVLHILSIATRVLPEFTDSAVLDKIAA--AKQALRHTLTAPARHDHSLVYLEMFRHAPIAVQLELYVGQRALSLETTPAIEDTDAARSMLAHEDLDAAAQAHALPFYRKISLTFNKTLANEDPDAA-GGLAVLGGSFLSAVGVLGGTLARISPTFVFDELLVTHYFGSARELAAALARGLVQQGVAQGYKXXXXXXXXXXXXXXXXXXXPGSERSYKVVGSMELLGDPLALVNKLSDSVLQFLRTTQAEFRGEEPTFGAGARMLVSGVVGGAFGSAAKIAGSLEDVIRGLSGTEVADAE--------GGGDTRVRHLKHGFQRGGQXXXXXXXXVLYDSIQQGISGLVDRPMEGAKEEGVAGFLTGMAKGIVVAVAAPVAGALGAVSKVTEGVDASTRYRQLERMGRRREPRSAQPGCP 1737
            V HVQ+DDMR R R PVV+QP DSG+NSH+R                  A+PFV + +++EVATLGMPH KS ++ LQ+    VD++FVLH+L++   ++PE T   VL K+    AK  +RHT+  PA+ D S+VY+E FRH+ I V++EL+VGQ ALS                      DAAA                     EDP+   GGL VLGG FL+ + VLG ++A ++PTFVFDEL+VTHY GSA  L   +   L QQ VAQGYK                           VVGSMELLGDPL+LV KL DSV+QF   T+AE  G+  T GAGA++LV G+VGG FGSAAKI GSLE +IRGLSGT +A+ E        G     V+ L+HG ++GG+        V Y++++ GI+GL+DRP EGAKEEG+AGF+ GMAKG              AVS+VTEGVDASTR    +RMGRRR  R+A    P
Sbjct:  931 VFHVQVDDMRRRTRMPVVLQPADSGFNSHLREAREGGAGGNRG------AVPFVRLLWDKEVATLGMPHLKSLDLELQEMRANVDLEFVLHLLALTGSLVPELTSEEVLAKMCRKKAKVTVRHTVPTPAKRDLSMVYVEAFRHSTIVVRVELWVGQAALSP---------------------DAAAL--------------------EDPETTTGGLTVLGGGFLTVLSVLGSSIAHVNPTFVFDELVVTHYCGSAGGLTGLVVTALTQQAVAQGYK---------------------------VVGSMELLGDPLSLVGKLGDSVVQFFTKTKAEMTGDADTVGAGAKVLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESEMEREEDGQLQREVKGLEHGVKQGGK--------VFYETMKAGITGLIDRPAEGAKEEGLAGFIAGMAKGXXXXXXXXXXXXXXAVSRVTEGVDASTRLSDEKRMGRRRAARTAFRSVP 1354          
BLAST of jgi.p|Trimin1|351724 vs. uniprot
Match: A0A6H5KWU7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWU7_9PHAE)

HSP 1 Score: 346 bits (888), Expect = 1.410e-98
Identity = 228/533 (42.78%), Postives = 293/533 (54.97%), Query Frame = 1
Query:  253 VLHVQLDDMRPRARFPVVMQPVDSGYNSHMRRRDXXXXXXXXXXXXVPPAIPFVCIQYEREVATLGMPHFKSFEVALQQCCVRVDVDFVLHILSIATRVLPEFTDSAVLDKIAA--AKQALRHTLTAPARHDHSLVYLEMFRHAPIAVQLELYVGQRALSLETTPAIEDTDAARSMLAHEDLDAAAQAHALPFYRKISLTFNKTLANEDPDAA-GGLAVLGGSFLSAVGVLGG---------------------------TLARISPTFVFDELLVTHYFGSARELAAALARGLVQQGVAQGYKXXXXXXXXXXXXXXXXXXXPGSERSYKVVGSMELLGDPLALVNKLSDSVLQFLRTTQAEFRGEEPTFGAGARMLVSGVVGGAFGSAAKIAGSLEDVIRGLSGTEVADAE--------GGGDTRVRHLKHGFQRGGQXXXXXXXXVLYDSIQQGISGLVDRPMEGAKEEGVAGFLTGMAKGIVVAVAAPVAGALGAVSKVTEGVDASTRYRQLERMGRRREPRSAQPGCP 1737
            V HVQ+DDMR R R PVV+QP DSG+NSH+R                  A+PFV + +++EVATLGMPH KS ++ LQ+    VD++FVLH+L++   ++PE T   VL K+    AK  +RHT+  PA+ D S+VY+E FRH+ I V++EL+VGQ ALS                      DAAA                     EDP+   GGL VLGG FL+ + VLG                            ++A ++PTFVFDEL+VTHY GSA  L   +   L QQ VAQGYK                           VVGSMELLGDPL+LV KL DSV+QF   T+AE  G+  T GAGA++LV G+VGG FGSAAKI GSLE +IRGLSGT +A+ E        G     V+ L+ G ++GG+        + Y++++ GI+GL+DRP EGAKEEG+AGF+ GMAKG               VS+VTEGVDASTR    +RMGRRR  R+A    P
Sbjct: 2565 VFHVQVDDMRRRTRMPVVLQPADSGFNSHLRDAREGGAGGNRG------AVPFVRLLWDKEVATLGMPHLKSLDLELQEMRANVDLEFVLHLLALTGSLVPELTSEEVLAKMCRKKAKVTVRHTVPTPAKRDLSMVYVEAFRHSTIVVRVELWVGQAALSP---------------------DAAAL--------------------EDPETTTGGLTVLGGGFLTVLSVLGSRRVPCSLIVIALACRCSWVTILWAETLSIAHVNPTFVFDELVVTHYCGSAGGLTGLVVTALTQQAVAQGYK---------------------------VVGSMELLGDPLSLVGKLGDSVVQFFTKTKAEMTGDADTVGAGAKLLVKGLVGGTFGSAAKITGSLEGMIRGLSGTAIAENESEMEREDDGQLQREVKDLEQGVKQGGK--------IFYETMKAGITGLIDRPAEGAKEEGLAGFIAGMAKGXXXXXXXXXXXXXXXVSRVTEGVDASTRLSDEKRMGRRRAARTAFRSVP 3015          
BLAST of jgi.p|Trimin1|351724 vs. uniprot
Match: A0A7S2GN42_9STRA (Hypothetical protein (Fragment) n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GN42_9STRA)

HSP 1 Score: 266 bits (681), Expect = 8.000e-77
Identity = 184/499 (36.87%), Postives = 263/499 (52.71%), Query Frame = 1
Query:  232 SDRXXXSVLHVQLDDMRPRARFPVVMQPVDSGYNSHMRRRDXXXXXXXXXXXXVPPAIPFVCIQYEREVAT-LGMPHFKSFEVALQQCCVRVDVDFVLHILSIATRVLPEFTDSAVLDK--IAAAKQALRHTLTAPARHDHSLVYLEMFRHAPIAVQLELYVGQRALSLETTPAIEDTDAARSMLAHEDLDAAAQAHALPFYRKISLTFNKTLANEDPDAAGGLAVLGGSFLSAVGVLGGTLARISPTFVFDELLVTHYFGSARELAAALARGLVQQGVAQGYKXXXXXXXXXXXXXXXXXXXPGSERSYKVVGSMELLGDPLALVNKLSDSVLQFLRTTQAEFRGEEPTFGAGARMLVSGVVGGAFGSAAKIAGSLEDVIRGLSGTEVADAEGGGDTRVRHLKHGFQRGGQXXXXXXXXVLYDSIQQGISGLVDRPMEGAKEEGVAGFLTGMAKGIVVAVAAPVAGALGAVSKVTEGVDASTRYRQLERMGRRREPRS 1719
            SD    SV HVQ+DDMRP A+ PVV QPVDSG+NS +R                   +PF+   +ER+ A+   M H KS +V +QQ   ++D+DFVL + S+A R + + ++S  +++  + +A+ A++H + AP   +  L+Y+E   H+ I VQLE+ VG R L+ +                                          LA+++     G+ ++G S  S + VLG +LA I+PTF F+EL +   FG   +LA+++   LV+QGVAQGYK                           VVGSMELLGDP++LV+ +   V QF R T A+  GE  T G G + L  GVVGG FGS AKI G+ + ++  ++G    D       R  H+  G   G +         ++  + +GI+G+V RP+EGA++ GV GFL G+ KG+V AVAAPVAGA GAVS VTE VDA+ +Y     MGRRR  RS
Sbjct:   86 SDMTIFSVYHVQVDDMRPNAKLPVVFQPVDSGWNSGLRSDSLRD-------------VPFLQCSFERDPASGHDMLHLKSLQVIVQQMQTKLDIDFVLQVASLAARSVRQLSESDAMEQASLTSARHAIQHRIKAPHYTNSGLIYIETLYHSSIVVQLEVMVGSRNLNTDD-----------------------------------------LADDEQR---GVWLMGSSLWSMLVVLGSSLAHINPTFQFNELKLADSFGQRWDLASSIFMSLVKQGVAQGYK---------------------------VVGSMELLGDPVSLVSNMGVGVYQFFRKTGADMLGESETRGEGVKHLFQGVVGGTFGSVAKITGAADTLLSAVTGQNERDNW----QRPEHVGQGIVIGSER--------VWRGVTEGITGIVVRPIEGAQQNGVPGFLFGLGKGVVGAVAAPVAGAFGAVSAVTESVDANLKYWDERPMGRRRNTRS 488          
BLAST of jgi.p|Trimin1|351724 vs. uniprot
Match: A0A7R9UEM8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UEM8_9STRA)

HSP 1 Score: 223 bits (567), Expect = 5.870e-57
Identity = 185/553 (33.45%), Postives = 254/553 (45.93%), Query Frame = 1
Query:  232 SDRXXXSVLHVQLDDMRPRARFPVVMQPVDSGYNSHMRRRDXXXXXXXXXXXXVPPAIPFVCIQYEREVATLGMPHFKSFEVALQQCCVRVDVDFVLHILSIATRVLPEFTDS----------------AVLDKIAAAKQALRHTLTA-------------------------------PARHDHS-LVYLEMFRHAPIAVQLELYVGQRALSLETTPAIEDTDAARSMLAHEDLDAAAQAHALPFYRKISLTFNKTLANEDPDAAGGLAVLGGSFLSAVGVLGGTLARISPTFVFDELLVTHYFGSARELAAALARGLVQQGVAQGYKXXXXXXXXXXXXXXXXXXXPGSERSYKVVGSMELLGDPLALVNKLSDSVLQFLRTTQAEFRGEEPTFGAGARMLVSGVVGGAFGSAAKIAGSLEDVIRGLS-----GTEVADAEGGGDTRVRHLKHGFQRGGQXXXXXXXXVLYDSIQQGISGLVDRPMEGAKE-EGVAGFLTGMAKGIVVAVAAPVAGALGAVSKVTEGVDASTRYRQLERMGRRREPRSAQP 1728
            SDR   SV H+Q+DD+R +ARFPVV++PVD+G+NSH+R  +                +PF+ + YEREV    + HFK  E  L +  V VDV  ++ ++    + +    D                 + LD  +A +Q+ R +                                  P  H  S L+Y+E   H PI +QLE+              I D +A  +      LD AA            L+ +   ++ED  A   LA+LG   L A+  L  T A  SP FVF E  V ++FG  ++L   L  GLV QGVAQ                           SYK+ GSME+LGDPLAL NK+ + ++QF R T AE RGE    G G R L  GVVGGA  SA+KI+G+LE++I GL         V  A+G    + RH+  G   GG+        V+  S+ +G+ GL D P    +  EGVAGF+ G+ KG+   V +PVAG LGA   VT  VDA+     L  +G+RR  R   P
Sbjct: 1847 SDRTELSVFHMQIDDLRRKARFPVVLRPVDTGFNSHLRGSNGKATEL----------LPFLRVMYEREVTATKIQHFKMIEGVLGRVQVHVDVRPMISLVRFFVKCVSRPADGDESDAQDTNGARYKSFSELDDASAQEQSNRDSFRGGADATARRGQAERISGPALKGCLLILKDRIEPLGHVSSGLIYVEHLHHGPIVLQLEILAN-----------IGDQNAIAT-----SLDPAANP----------LSLDSPFSSEDETA---LALLGNQVLGALTALVSTFAHASPIFVFGECEVDNFFGQRKDLVRTLTLGLVHQGVAQ---------------------------SYKLFGSMEVLGDPLALANKVGEGMVQFFRATGAELRGESDFKGEGLRRLAQGVVGGAAQSASKISGTLEEMISGLGLGQLGPNHVLAADGTIMKKPRHIGEGVVEGGK--------VMITSLTRGVLGLYDHPRLAIENAEGVAGFVGGVGKGLAGLVVSPVAGVLGAFRTVTASVDATLHLWDLVPLGQRRPRRVLAP 2325          
BLAST of jgi.p|Trimin1|351724 vs. uniprot
Match: D8LB75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB75_ECTSI)

HSP 1 Score: 161 bits (407), Expect = 7.230e-37
Identity = 150/515 (29.13%), Postives = 237/515 (46.02%), Query Frame = 1
Query:  250 SVLHVQLDDMRPRARFPVVMQPVDSGYNSHMRRRDXXXXXXXXXXXXVPPAIPFVCIQYEREVATLGMPHF---KSFEVALQQCCVRVDVDFVLHILSIATRVLPEFTDSAVLDK----IAAAKQALRHTLTAPARHDHSL--VYLEMFRHAPIAVQLELYVGQRALSLETTPAIEDTDAARSMLAHEDLDAAAQAHALPFYRKISLTFNKTLANEDPDAAGGLAVLGGSFLSAVGVLGGTLARISPTFVFDELLVTHYFGSARELAAALARGLVQQGVAQGYKXXXXXXXXXXXXXXXXXXXPGSERSYKVVGSMELLGDPLALVNKLSDSVLQFLRTTQAEFRGEEPTFGAGARMLVSGVVGGAFGSAAKIAGSLEDVIRGLSGTEVADAEGGGDTRV-RHLKHGFQRGGQXXXXXXXXVLY--DSIQQGISGLVDRPMEGAKEEGVAGFLTGMAKGIVVAVAAPVAGALGAVSKVTEGVDASTRYRQLERMGRRREPRSAQPGCPLAVLTRD 1758
            SV H QLDDMR  +  P+++ P  +G+NSH+ +                   P   ++ ER+V      H    +S E+ L +    V VDF + +  +    L  +T+S+  +     IA  +  + + L APA  D ++  +Y+  +    I V ++ ++G +  +L ++    D D        E+ D                 F  +LA         L  +GG     +   G  +A  SPTF FD   + HY+GS  +    +    V+QGV Q                           +YKV+G +++LGDPL+L   +S  V+ F+  T A   GE      G++ LV GVVGG   SA+K+  +L++ +R     +     G   T+   HL  G  +G          ++Y   +++ GI+G+V +P+ GA++ G AGF+ G+ +G+V  VAAPV+ ALGA SK+T G+DA+TR    E MGRRREPR      PL +  RD
Sbjct: 2429 SVWHFQLDDMRADSPHPIILAPQCTGFNSHLTKVHYNGLSGS----------PAFRVEVERDVEVSLTHHMWVIRSIEMCLGKVHCAVHVDFWIDVQDVVFASL-NWTNSSPAEARARAIADTQGVVGNLLQAPAA-DATVDRIYIGEYFQEEIEVAVDFHLGTKVAALLSSKPPADGD--------EEKDEGG--------------FGASLAMMP------LGAVGGVVWGLLSSFGAGIANASPTFNFDAYELEHYYGSKTQAVTLVVMSFVKQGVVQ---------------------------AYKVLGHIDILGDPLSLGMNISSGVIGFVTKTGAGHIGE------GSKDLVKGVVGGTASSASKMTDALDNFVREAGCMDAEAPSGMESTKAPEHLGQGLTQG----------MMYFGHTVKDGITGVVMKPVRGARKNGAAGFVKGVGQGVVGLVAAPVSAALGATSKITAGIDATTRLLDDEPMGRRREPRH-----PLGLGERD 2855          
BLAST of jgi.p|Trimin1|351724 vs. uniprot
Match: W7U3K2_9STRA (Ph domain containing protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7U3K2_9STRA)

HSP 1 Score: 155 bits (391), Expect = 7.110e-35
Identity = 159/583 (27.27%), Postives = 249/583 (42.71%), Query Frame = 1
Query:  235 DRXXXSVLHVQLDDMRPRARFPVVMQPVDSGYNSHMRRRDXXXXXXXXXXXXV-----------PPA-----------IPFVCIQYEREVAT--LGMPHFKSFEVALQQCCVRVDVDFVLHILSIATRVLPEFTDSA-----------------------------VLDK--IAAAKQALRHTLTAPARH-----DHSLVYLEMFRHAPIAVQLELYVGQRALSLETTPAIEDTDAARSMLAHEDLDAAAQAHALPFYRKISLTFNKTLANEDPDAAGGLAVLGGSFLSAVGVLGGTLARISP-TFVFDELLVTHYFGSARELAAALARGLVQQGVAQGYKXXXXXXXXXXXXXXXXXXXPGSERSYKVVGSMELLGDPLALVNKLSDSVLQFLRTTQAEFRGEEPTFGAGARMLVSGVVGGAFGSAAKIAGSLEDVIRGLSGTEVADA----------------------EGGGDTR---------VRHLKHGFQRGGQXXXXXXXXVLYDSIQQGISGLVDRPMEGAKEEGVAGFLTGMAKGIVVAVAAPVAGALGAVSKVTEGVDASTRYRQLERMGRRR 1707
            DR   ++ H+QLDDMRP A F V++QP DSG+++  RR                          P A           +P V +  E E+ T    + HF+  E+++Q+  +RVD+D +  +++   R L  F                                 ++D+  I+  ++ LR  +  P           LVY+E+F H+ + V +EL  G         P+ ++  A ++ L    +D              SL  ++ L   D     GL ++G   +  +  +  +LA++S  T VF+ELL THYFGS  +L   +   L QQ + Q                           SYK++G+M+LLG+PL L       V++F R TQAE  G+  + G G R L   V+GG F S +KI G++  ++  + G     A                      E GG +           +HL  G  +GG+        V Y S++ G+  + D P +GA  EG +GFL GM KG+V A+AAP+ G LG +S+VT+    +T Y +  R+ RRR
Sbjct: 3707 DRAQLALYHIQLDDMRPGATFAVIIQPADSGWHTPARRSKKLKAAAMAMSVSSTGTCTEQQTERPAAAKEDEHVFSNLVPLVRVTAEPELHTPWSEVVHFRGLELSVQELEMRVDLDTLFSLVAYIGR-LSRFDSEREERAATAGDIYHHYYNQHRDPSMRSLRTNIMDEKSISLVRRLLRSKVRVPDAALSEAVGQRLVYIELFHHSSLIVGMELVPGGGNF-----PSRKER-AKQTGLPGNRMDG-------------SLGLDQEL---DEALVSGLELIGTGVVQLLADMARSLAQLSGLTLVFNELLFTHYFGSHYDLGHIVVLSLRQQAITQ---------------------------SYKLLGAMDLLGNPLNLFLGFGSGVVEFFRRTQAELVGDADSKGEGLRRLAKAVIGGPFSSVSKITGTVASLLEEVVGVREMAAMAEEGMRDELSSSTARAIGHQTEDGGSSADGWRGRAPPPQHLGEGILKGGE--------VFYKSVKSGVKNIYDLPQQGASREGFSGFLKGMGKGVVGALAAPLIGTLGGISRVTD----TTAYFEKPRILRRR 4227          
BLAST of jgi.p|Trimin1|351724 vs. uniprot
Match: A0A6H5KB17_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB17_9PHAE)

HSP 1 Score: 126 bits (316), Expect = 7.150e-26
Identity = 138/516 (26.74%), Postives = 226/516 (43.80%), Query Frame = 1
Query:  250 SVLHVQLDDMRPRARFPVVMQPVDSGYNSHMRRRDXXXXXXXXXXXXVPPAIPFVCIQYEREVATLGMPHF---KSFEVALQQCCVRVDVDFVLHILSIATRVLPEFTDSAVLDK----IAAAKQALRHTLTAPARHDHSL--VYLEMFRHAPIAVQLELYVGQRALSLETTPAIEDTDAARSMLAHEDLDAAAQAHALPFYRKISLTFNKTLANEDPDAAGGLAVLGGSFLSAVGVLGGTLARISPTFVFDELLVTHYFGSARELAAALARGLVQQGVAQGYKXXXXXXXXXXXXXXXXXXXPGSERSYKVVGSMELLGDPLALVNKLSDSVLQFLRTTQAEFRGEEPTFGAGARMLVSGVVGGAFGSAAKIAGSLEDVIRGLSGTEVADAEGGGDTRV--RHLKHGFQRGGQXXXXXXXXVLY--DSIQQGISGLVDRPMEGAKEEGVAGFLTGMAKGIVVAVAAPVAGALGAVSKVTEGVDASTRYRQLERMGRRREPRSAQPGCPLAVLTRD 1758
            SV H QLDDMR  +  P+++ P  +G+NSH+ +                   P   ++ ER+V      H    +S ++ L +    V VDF +  +  A+     +T+S+  +     IA  +  + + L APA  D ++  +Y+  +    I V ++ ++G +  +L ++    D D        E+ D                 F  +LA         L  +GG     +   G  +A  SPTF FD   + HY+GS  +    +    V+QGV Q                           +YKV+G +++LGDPL+L   +S  V+ F+  T A   GE      G++ LV GVVGG   SA+K+  +L++ +R  +G   A+A  G +++    HL  G  +G          ++Y   +++ GI+G+V +P+ GA++ G AGF+                      SK+T G+DA+TR    + MGRRREPR      PL +  RD
Sbjct: 1335 SVWHFQLDDMRADSPHPIILAPQCTGFNSHLTKVHYNGLSGS----------PAFRVEVERDVEVSLTHHMWVIRSIKMCLGKVHCAVHVDFWIDDVVFASL---NWTNSSPAEARARAIADTQGVVGNLLQAPAA-DATVDRIYIGEYFQEEIEVAVDFHLGTKVAALLSSKPSADGD--------EEKDEGG--------------FGASLAMMP------LGAVGGVVWGLLSSFGAGIANASPTFNFDAYELEHYYGSKTQAVTQVVMSFVKQGVVQ---------------------------AYKVLGHIDILGDPLSLGMNISSGVIGFVTKTGAGHIGE------GSKDLVKGVVGGTASSASKMTDALDNFVR-EAGCMDAEAPSGMESKKAPEHLGQGLTQG----------MMYFGHTVKDGITGVVMKPVRGARKGGAAGFVKXXXXXXXXXXXXXXXXXXXXXSKITAGIDATTRLLDDDPMGRRREPRH-----PLGLGERD 1759          
BLAST of jgi.p|Trimin1|351724 vs. uniprot
Match: A0A2D4C0V0_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C0V0_PYTIN)

HSP 1 Score: 125 bits (313), Expect = 2.010e-25
Identity = 131/503 (26.04%), Postives = 208/503 (41.35%), Query Frame = 1
Query:  250 SVLHVQLDDMRPRARFPVVMQPVDSGYNSHMRRRDXXXXXXXXXXXXVPPAIPFVCIQYEREVATLGMPHFKSFEVALQQCCVRVDVDFVLHILSIATRVLPEFTDSAVLDKIAAAKQ-ALRHTLTAPAR--HDHSLVYLEMFRHAPIAVQLELYVGQRALSLETTPAIEDTDAARSMLAHEDLDAAAQAHALPFYRKISLTFNKTLANEDPDAAGGLAVLGGSFLSAVGVLGGTLARISPTFVFDELLVTHYFGSARELAAALARGLVQQGVAQGYKXXXXXXXXXXXXXXXXXXXPGSERSYKVVGSMELLGDPLALVNKLSDSVLQFLRTTQAEFRGEEPTFGAGARMLVSGVVGGAFGSAAKIAGSLEDVIRGLSGTEVADAEGGGDTRVRHLKHGFQRGGQXXXXXXXXVLYDSIQQGISGLVDRPMEGAKEEGVAGFLTGMAKGIVVAVAAPVAGALGAVSKVTEGVDASTRYRQLERM-GRRREPR--SAQPGCPL 1740
            SV H+Q+DDM P A +PVV+ P+DSG+NS  R               +    PFV + +     + G+   + F+V L    VR+++++V  +L++    LP   +   +      K   L + LT P +  +  SL+Y + +  +     L                                D+AA+ H                        G  ++LG    S +G + G +A ++P F FDE++  + F    +L  A+   +V   V Q YK                           +VGS+ELLGDP+ L   + D      R  + + +G+    G  A  LV  VVG    S  K++  L DV++  +  E  +       + RH+  G  +GG         VL  S+  G+ G +  P+ GAK++GV GF  G+ +G +  VA+P  G LG V K++  V+ +T     +   G RR PR  SA P  PL
Sbjct: 1426 SVHHMQIDDMTPNALYPVVLAPIDSGFNSDKRE----------GWLPMDGERPFVTVTFATAPPS-GITVVEEFDVDLNSSVVRLNLEYVFRLLNLIYEFLPTSDEDTQIQYGVDQKDWLLTNELTIPEQIGYGGSLMYFKKWSLSAFEFHLVF------------------------------DSAAEEHG----------------------DGISSILG----STIGSIVGGIAHVTPEFQFDEIVYENRFFYQYDLIYAVVWDIVLSVVGQWYK---------------------------IVGSVELLGDPVGLATDIVDGFALAARQLKRDVKGKSLRKGESALTLVQTVVGAPMKSIGKVSNGLGDVLKKATDFESQEEA----NQPRHVPEGLLQGG--------VVLTKSLAYGVKGFIKEPVRGAKKDGVVGFAKGVGRGTLQLVASPFVGTLGVVEKISMSVNNTTHLLDEKSYDGPRRPPRDLSASPLKPL 1822          
BLAST of jgi.p|Trimin1|351724 vs. uniprot
Match: A0A812L9G9_9DINO (Vps13A protein (Fragment) n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812L9G9_9DINO)

HSP 1 Score: 115 bits (289), Expect = 5.640e-23
Identity = 146/525 (27.81%), Postives = 214/525 (40.76%), Query Frame = 1
Query:  253 VLHVQLDDMRPRARF-PVVMQPVDSGYNSHMRRRDXXXXXXXXXXXXVPPAIPFVCIQYEREVATLGMPHFKSFEVALQQCCVRVDVDFVLHILSIATRVLPEFTD---------SAVLDKIAAAKQA-------LRHTLTAPARHDHSLVYLEMFRHAPIAVQLELYVGQRALSLETTPAIEDTDAARSMLAHEDLDAAAQAHALPFYRKI--SLTFN------KTLANEDPDAAGGLAVLGGSFLSAVGVLGGTLARISPTFVFDELLVTHYFGSARELAAALARGLVQQGVAQGYKXXXXXXXXXXXXXXXXXXXPGSERSYKVVGSMELLGDPLALVNKLSDSVLQFLRTTQAEFRGEEPTFGAGARMLVSGVVGGAFGSAAKIAGSLEDVIRGLSGTEVADAEGGGDTRVRHLKHGFQRGGQXXXXXXXXVLYDSIQQGISGLVDRPMEGAKEEGVAGFLTGMAKGIVVAVAAPVAGALGAVSKVTEGVDASTR-YRQLERMGRRREPRSAQPGCPLAVL 1749
            V H Q+D+MR   +  P+++ P DSGY  H  RR+                IPFV    E+  +  G+ HFK   + LQ   VR+D+ F + +     + L E+           S+  D+   AKQ        +    ++  RH    VY E FR   +  Q+E+ +  ++  L+   A  ++  A SM   ED +  AQ     +  +I   LT        K L          +  +G   LS VG        ++P F F E +             +L R  V+ G+ Q                            +KV+ S+ LLGDP+ L   ++  V++F R T +E    +   G G   L  GVVGG   +A K  G+L D +  L+ T       GGD R RH + G              V       GI+GLV  P++G + +GV G  TGM KG         +G +  V  V EGVDA+TR +   E++ RRREPR    G  L  L
Sbjct:  162 VHHFQIDNMREADKLRPIIVCPEDSGY--HSDRRERLHKHKGRKGSTDSETIPFVYFCMEKLPS--GILHFKELTLLLQPVIVRLDLVFWVKV----GQQLFEWATVDSGSANAGSSAEDREIVAKQVFLLREGGIEVPSSSTTRHP---VYFEYFRLGALIAQVEILMPMKSKLLKKRQA--NSGVASSMFEDEDDEQDAQMLQSMWLSQILARLTHRSHGLVKKVLMVAQKGLLFVVTSVGSGVLSGVG-------HMTPRFAFPETVFQRTLEDLMPFLYSLVRDYVKTGMYQ---------------------------FWKVLFSINLLGDPVGLTTSVTGGVMKFFRKTGSEVIAGDLK-GEGLLSLAQGVVGGTAATAGKFFGALGDTVDALAQT-------GGD-RDRHYQPGSVNHVGDGLTAGAQVFLHGATSGIAGLVQAPVQGFQRKGVVGLATGMLKGXXXXXXXXXSGLMHGVQHVAEGVDATTRLWDHAEQIVRRREPRGLPSGAKLVPL 630          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351724 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A835YGB0_9STRA6.190e-85100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YR52_9STRA4.830e-3469.64Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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BLAST of jgi.p|Trimin1|351724 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YJU6_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7G2C7_ECTSI9.880e-10745.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KWU7_9PHAE1.410e-9842.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2GN42_9STRA8.000e-7736.87Hypothetical protein (Fragment) n=2 Tax=Dictyocha ... [more]
A0A7R9UEM8_9STRA5.870e-5733.45Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
D8LB75_ECTSI7.230e-3729.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
W7U3K2_9STRA7.110e-3527.27Ph domain containing protein n=4 Tax=Monodopsidace... [more]
A0A6H5KB17_9PHAE7.150e-2626.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2D4C0V0_PYTIN2.010e-2526.04Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A812L9G9_9DINO5.640e-2327.81Vps13A protein (Fragment) n=1 Tax=Symbiodinium sp.... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_98contigContig_98:456564..460847 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|351724|estExt_Genemark1.C_Ctg_980052
Hectar predicted targeting categorysignal peptide
TranscriptId352046
TrackFilteredModels1
ProteinId351724
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351724gene_14930Tribonema minus UTEX_B_3156 geneContig_98 456564..460847 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351724Trimin1|351724|estExt_Genemark1.C_Ctg_980052Tribonema minus UTEX_B_3156 polypeptideContig_98 456564..460830 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_14930_1exon_14930_1Tribonema minus UTEX_B_3156 exonContig_98 456564..456568 +
exon_14930_2exon_14930_2Tribonema minus UTEX_B_3156 exonContig_98 457334..457718 +
exon_14930_3exon_14930_3Tribonema minus UTEX_B_3156 exonContig_98 458985..459056 +
exon_14930_4exon_14930_4Tribonema minus UTEX_B_3156 exonContig_98 460133..460555 +
exon_14930_5exon_14930_5Tribonema minus UTEX_B_3156 exonContig_98 460813..460847 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_14930CDS_14930Tribonema minus UTEX_B_3156 CDSContig_98 456564..456568 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_14930UTR3_14930Tribonema minus UTEX_B_3156 three_prime_UTRContig_98 460831..460847 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_14930 ID=mRNA_14930|Name=jgi.p|Trimin1|351724|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=920bp|location=Sequence derived from alignment at Contig_98:456564..460847+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGATGCTGGCAGGGCTCCCCACCGGCATCACCGTCATCATGGTGGCAAA
GCGCGCAGCATTCCTCCTTCTCCTGCTGCCCCACAGCCTGATGGCGGCGC
CATTGGACGCCCTGCAGCTGCAGGCCGACAGCGGTGGCTGGCCGCCGCCG
CCGTGCCGCCACGGCAGCCGCAGGCTCTACTCTACTCGTGGACGCGAGTC
GGACTCCGAGTCGGAGACAGGGTCAGGCAGCGGTGCGCGAGGCGCCGCGG
AGCCCGCGGCGTCGGCTGTGATGTTCTGCTGCAATCAGCACGACCTCGTG
GCACCCGACGCATACATTGAGAACCATCCAGCGTGCACGCCACACCTGGC
CCCAGCGCTCGCCGGCCCCGCCGCACGCAGGCTCCAAGCGGAAGCGATCG
TCGCTCGTACGACTGTCACCAGGCAGCCCACGGCCAGGCCCACCTCGAAG
CCAACATCAAAGCCTACGCGCACCCCCACGCGACAGCCTACGCGCACCCC
CACCGCCACCCCCACACGCACCCCCACTGGCCAGCCGACAAGAACGCCCA
CTGGCCAGCCGACCCCCCTGCCCACGCGAACGCCTACAACCGCGCCTACT
CGAACGCCCACTGCCGCGCCTACTCGGACGCCAACGCGTCAGCCCACGCG
CACCCCCACCGCCACCCCCACACGCACCCCGACGGGAACGCCTACAGGCC
AGCCCACGCGAACGCCCACTGCGACGCCCACGCGAACACCGACGGCGCCG
CCCACTCGGACGCCAACTGCGACGCCCACGCGCACGCCAACTGCGACGCC
CACCACACGGTCACCGACGGGCCAGCCCACTCGGGCGCCGACGAGGCAGC
CCACGCGCGTGCCGACGGCGCTGCCGACGCCGCAGGGGCGCTGCTATTCC
TGACTAACCCTTACCCGTAG
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protein sequence of jgi.p|Trimin1|351724

>Trimin1|351724|estExt_Genemark1.C_Ctg_980052 ID=Trimin1|351724|estExt_Genemark1.C_Ctg_980052|Name=jgi.p|Trimin1|351724|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=301bp
MMLAGLPTGITVIMVAKRAAFLLLLLPHSLMAAPLDALQLQADSGGWPPP
PCRHGSRRLYSTRGRESDSESETGSGSGARGAAEPAASAVMFCCNQHDLV
APDAYIENHPACTPHLAPALAGPAARRLQAEAIVARTTVTRQPTARPTSK
PTSKPTRTPTRQPTRTPTATPTRTPTGQPTRTPTGQPTPLPTRTPTTAPT
RTPTAAPTRTPTRQPTRTPTATPTRTPTGTPTGQPTRTPTATPTRTPTAP
PTRTPTATPTRTPTATPTTRSPTGQPTRAPTRQPTRVPTALPTPQGRCYS
*
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mRNA from alignment at Contig_98:456564..460847+

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_14930 ID=mRNA_14930|Name=jgi.p|Trimin1|351724|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4284bp|location=Sequence derived from alignment at Contig_98:456564..460847+ (Tribonema minus UTEX_B_3156 )
ATGATGTTGAACGTGGACTTAACAATAACCTCAACTGTCACACTGAAGTT CAACTTTGGCTAAGTACAGGGAGTTCAACTCCAAATTGAAGTTTGGAAGG AGCTCAGTGCTGATCATGGAATCCTCACCAACTGCAAGTGAAGTTCAACA CTGTGCACTTCACCTAACAACATCAACGTCATGACATTGTTCAAGTTCAA GTTGAAAATGAGTAGTGAACGAATGGCACTGGCAGCCTGAGGGCCTGGCC CTGCCTGCCAGTGGCCCAGTGGGTTCATTGACATTCAATTTGTCGACCAG ACTGAGGTTGAGACTTCGCCAATTTGAAAGCGCCACTGCCAGCCAGTGGT TCAATTTGAAATCAGATGCTGGGTCCTGTTTTCCAATTGAATTAATACTA TTAAGAGTATTACTCAGGTCCCGTTTTTTGCAATTCAATCCTTGGGACCC AGTGGCACCACCACCGCAGGCACCGCACTGCTGCAGCATTCAATCTGACA GTGTCAGTCACGGTGATTTGAAACCTCACACCCTCAGGCTAGCGGCCGGC GGCTGCTACTAGTAGTACTAGTAGTACTATAATAGTACCGTAACATAGTC TAGTAGTTCCGTGACGACATCAGTCTGAGATCATCCTCCTTCCCGCATTT CCCCCTCCCCTACTTAGTCTAGCAGGCTGAGCGGTCCCGAACCGTCAGAT CCAAGTTGAACAGTTCGGCGACTCACTGAGTGTCACACGGTGGCACGCCC CCCCGCCCCCCCCCCCTCAGGCTGGCAGGGCTCCCCACCGGCATCACCGT CATCATGGTGGCAAAGCGCGCAGCATTCCTCCTTCTCCTGCTGCCCCACA GCCTGATGGCGGCGCCATTGGACGCCCTGCAGCTGCAGGCCGACAGCGGT GGCTGGCCGCCGCCGCCGTGCCGCCACGGCAGCCGCAGGCTCTACTCTAC TCGTGGACGCGAGTCGGACTCCGAGTCGGAGACAGGGTCAGGCAGCGGTG CGCGAGGCGCCGCGGAGCCCGCGGCGTCGGCTGTGATGTTCTGCTGCAAT CAGCACGACCTCGTGGCACCCGACGCATACATTGAGAACCATCCAGCGTG CACGCCACACCTGGCCCCAGCGCTCGCCGGCCCCGCCGCACGCAGGCTCC AAGCGGTAAGAGGAACACTCACGGTGACTACTAGTAAAAGTTAAGTACTA TAATATAGTACTACAGTAAATAAATAATAGTCGAAGACGGTCACCGTATA TTATGCTCACTGACTCAGAGTCTGTCAGTGAGTCCCTGCAGCAGCAGTAA CTGGGTCAAATCTGATTCTGAATCCGATTCAGTGGTAACCCAGAGGCTCT TGAAGGCATACTGTAACAGCATGCCAGACTGAGTGTGTACTCAGTATAGC TACTAGTATAGACTACGATGATCATCGTACGATTCAGCCTGCCAGTGGGA CACTTCACTGAAGTACAGTAACAGACTGTTACAGTTACTGACAGACTGAG TGTATATTATATTCGATTTCAAACTTTTGGAGGTCTTAGACTCTTTTGAA AAACTTAAGTAATGCACGTCACGCGTACATGTTGATCGCGCCGTCAGCGG AAGGCGTTGCATCATGGTGTGCGTCGCCATCCGATTCGGCATTACACACC TGGTCCACCGTGACGGTGACCGTGACCGTCTCAGGCTGCCAGATTCAATT TGTCAGTGAGTGCGGTGTCTGCTAGAATGACGTTGAAGTTTGCCACCACT GCCAGTGGACCGCACTGCGTGGCACGCCCAGGCATCAAAAGCGTACATTC CAGCAACGGTTACTGTACACGGCGTTACGTCAGGTGATCCAGGACTCGCC TTGTGACATCATTGGGTTTTCCAGGCAGACCGCATGCTCAGCTTTTGTGG CCGTGACATACTTTTGGAGCTGCTTGGAGCAATACTTTGTCTGGAAGATA ATCCCAATAATCCGTTGCACCGTTGGACGAGCACTGCACTACTAGAAGCT GCCGCAGCGGCTGTGACTTGTTGTGCACACAGTCTGCCGGGTCCGGAACC CTGCGCAGTTTCAAGTTGGTGCTGAAACCGGTGACCGCTTGAGATGTGTG AACTTTGAACTTCTTGAAGCTCCACCAAGACGCTGCATAACCCTTCAAGT GAGTCACTTGGCAACTTGGCTTCCATCGCTGTCTGAGCGCTGCCGCAGGT ACTACTAGTACTACTAGGCTAGTAGTAGTACGTCGAGGGCATCATGTCTC TGCCAGAGTCTGAGTCAGTACAGCCCGGTTCAACTGGGACTTCTGAATCA AGTTGCAGGCAGCCTCAGGCTGCGGACACGCCGTCTTCCTTGTAATGTAC GCCGCACTGCAGACGGCTTGGAGGGTGACATGATGCTGACGCTTTAAGCT GCTGCGTCTGCTTTGTCGCAGGAAGCGATCGTCGCTCGTACGACTGTCAC CAGGCAGCCCACGGCCAGGCCCACCTCGAAGCCAACATCAAAGGTGAGGA AATGGCACATGACATTCATTCACGAGTTGTCGATAGGACTGACTCACCGT GACTGTGCGCCCAGATGTTGTCGGCACAACGCAATGCCACTTGGCACCTG TGCGACAGTGTACTCCTAAGCTGCACTTCCAGCGCTTTTCCGGCTGGGCA CCCACTCAGGCTGCTGCAGTGCTGCACATAGTACCCCCTGGTGTTCAAGG AAGTTCCTGCAGTTACTGCACATGTGTACCAGAAAGTGTTATCACAGTCA TCTTGGCAGTGCGGGGGCGCTTACGCGTACATTGAACTTGAATTTACTTG TTGAAGTTCAATGTATCCCGCAGAAGAGCACGCGTATGTCTGTTTCTCAA GGTCAGAATGTTTGCGGCTGTAGCACTCAGGGCGACAGTTATGATGCGAT GGGTGCATTCTTCTCTGATTTGGTGGTTTCATTCTTCTCTGCGCTGTTTT GGGAAACTTTGAAACCGCGAGATTCGGCTGGCCAACTTGAACTGCTTGGA GAGTCGGTCTTAGGACTCCGCCAGCAGTCCGACCGAGTCAACTTGACTCA GCAGGGTCGTGGTCTGCTTGCTGATTGTGTGAGCGCGGTCGCTGGATACC CTGGAGCAGGCTTAGCTCTAGCAAGGCCTGTCGACATGTACGGACCCACA GACGCTGTGTGCGTTCTGGTACTCCAACTTCAAATCAAAGTCAAGGATAG CCCCCACGTGTTTATTGCGAGTACCACCAAGCAAGCGTTGCATGCCCGCC ATCCCGGAGCGAGAACACACAGATGATGGCCTGCTCGCCATTTGCACGCC GTGCGCGCAGCCCACGGACCGCGTCTTGCCCGCCCGTTGCACTAAAGCAA AAACTCAAATTGCTGACTCCTTCCACCTTCGCCCGCCTGCCGCATTTGAG CAAGACAACCGTCGCTTGCTGTGCGTGCAGCCCGCCGCGTCGCTCAATAA AAGTTCCACTTTGCCCCCCCTCCCCCAAAAAACTCAACGCGGCTGCTCAG CTGACGCGGAGCACTGAGCGCACTGAAAACGTGTCCCGTCCCTGCATGCC CCTTTGCGCGCGCGCACAGCCTACGCGCACCCCCACGCGACAGCCTACGC GCACCCCCACCGCCACCCCCACACGCACCCCCACTGGCCAGCCGACAAGA ACGCCCACTGGCCAGCCGACCCCCCTGCCCACGCGAACGCCTACAACCGC GCCTACTCGAACGCCCACTGCCGCGCCTACTCGGACGCCAACGCGTCAGC CCACGCGCACCCCCACCGCCACCCCCACACGCACCCCGACGGGAACGCCT ACAGGCCAGCCCACGCGAACGCCCACTGCGACGCCCACGCGAACACCGAC GGCGCCGCCCACTCGGACGCCAACTGCGACGCCCACGCGCACGCCAACTG CGACGCCCACCACACGGTCACCGACGGGCCAGCCCACTCGGGCGCCGACG AGGCAGCCCACGCGCGTGCCGACGGCGCTGCCGACGCCGCAGGTGCGCTG CTGCTGCTGCCAATCGTAACTGTGACCCTGCGTCTGACCCTGATCCCCCC CCCTCAACAATTTGCCTAAACCCCGCCCTGATATCTGCGGCGCCCGCCCG TGCGCTCGGTGCGGCTCGGCCGATGCGCCAGCGCCGCATGATCGCTGCCC CAAATCTGGTACTGAGATTGATGCTGATGCTAACCCTAACTGCGGCGCCC AGTGCTCCGTCGACGCTAGCCGACTGTCGCCCCCCCGCCGCTGCCGCAGG GGCGCTGCTATTCCTGACTAACCCTTACCCGTAG
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Coding sequence (CDS) from alignment at Contig_98:456564..460847+

>mRNA_14930 ID=mRNA_14930|Name=jgi.p|Trimin1|351724|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=903bp|location=Sequence derived from alignment at Contig_98:456564..460847+ (Tribonema minus UTEX_B_3156 )
ATGATGCTGGCAGGGCTCCCCACCGGCATCACCGTCATCATGGTGGCAAA
GCGCGCAGCATTCCTCCTTCTCCTGCTGCCCCACAGCCTGATGGCGGCGC
CATTGGACGCCCTGCAGCTGCAGGCCGACAGCGGTGGCTGGCCGCCGCCG
CCGTGCCGCCACGGCAGCCGCAGGCTCTACTCTACTCGTGGACGCGAGTC
GGACTCCGAGTCGGAGACAGGGTCAGGCAGCGGTGCGCGAGGCGCCGCGG
AGCCCGCGGCGTCGGCTGTGATGTTCTGCTGCAATCAGCACGACCTCGTG
GCACCCGACGCATACATTGAGAACCATCCAGCGTGCACGCCACACCTGGC
CCCAGCGCTCGCCGGCCCCGCCGCACGCAGGCTCCAAGCGGAAGCGATCG
TCGCTCGTACGACTGTCACCAGGCAGCCCACGGCCAGGCCCACCTCGAAG
CCAACATCAAAGCCTACGCGCACCCCCACGCGACAGCCTACGCGCACCCC
CACCGCCACCCCCACACGCACCCCCACTGGCCAGCCGACAAGAACGCCCA
CTGGCCAGCCGACCCCCCTGCCCACGCGAACGCCTACAACCGCGCCTACT
CGAACGCCCACTGCCGCGCCTACTCGGACGCCAACGCGTCAGCCCACGCG
CACCCCCACCGCCACCCCCACACGCACCCCGACGGGAACGCCTACAGGCC
AGCCCACGCGAACGCCCACTGCGACGCCCACGCGAACACCGACGGCGCCG
CCCACTCGGACGCCAACTGCGACGCCCACGCGCACGCCAACTGCGACGCC
CACCACACGGTCACCGACGGGCCAGCCCACTCGGGCGCCGACGAGGCAGC
CCACGCGCGTGCCGACGGCGCTGCCGACGCCGCAGGGGCGCTGCTATTCC
TGA
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