mRNA_14909 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|339730
Unique Name	mRNA_14909
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|339730 vs. uniprot
Match: A0A836C6K2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6K2_9STRA)

HSP 1 Score: 965 bits (2495), Expect = 0.000e+0
Identity = 639/639 (100.00%), Postives = 639/639 (100.00%), Query Frame = 2

Query:   29 MAASLLAGTRLCLSNAAAGAPGRQRTTVMKVVHRASAAFQHAGNAHVCTAAAAAVCPRPYVSKPQRSYCSAGHRRSPVVHGPIQQQQXXXXXXXXXXXXXXXXXXXXXXXDPEVVWVEQRIQMFAAENGGAMPSEEQVEQWRGSAKLFMMLCMGFERRTGQAMNEARAGVLQAFVDDVRTRTYYAQELVIMAELETEWKRDHGKEATRADDKKLAAMCFERLAEDKQMLAGAFNALDLLCTAAAPLVLLLHPYKYTGVLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSTLVYCSNAQFGRRDFEAAQDEMCAALTAVDVDAQEREAAAKEERHQMEQETEQHQFQMLTNARRAFTEAYGREPAINELQGTLASALVPELLGFAASEELRPLEDFYKALPPLEGPRAASAAEVESVTXXXXXXXXXXXXXXXXXIMRAWAERFVAPLKLCPFAGSATRPLHVYASAAXXXXXXXXXXXDDSTPTFDAIMRALAAVWQAAEAFDDDMQRAXXXXXXXXXXXXXXXRATALVPLPALRALHWPVFEAFCELATTGLRARGTPLAAAAAASRWRRCVRTATTRARSRRRAAATRRTCGGARXXXXXXXXXXXXXXXXXXXXXPPSSARSLRRWAGDRNFVR 1945
            MAASLLAGTRLCLSNAAAGAPGRQRTTVMKVVHRASAAFQHAGNAHVCTAAAAAVCPRPYVSKPQRSYCSAGHRRSPVVHGPIQQQQXXXXXXXXXXXXXXXXXXXXXXXDPEVVWVEQRIQMFAAENGGAMPSEEQVEQWRGSAKLFMMLCMGFERRTGQAMNEARAGVLQAFVDDVRTRTYYAQELVIMAELETEWKRDHGKEATRADDKKLAAMCFERLAEDKQMLAGAFNALDLLCTAAAPLVLLLHPYKYTGVLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSTLVYCSNAQFGRRDFEAAQDEMCAALTAVDVDAQEREAAAKEERHQMEQETEQHQFQMLTNARRAFTEAYGREPAINELQGTLASALVPELLGFAASEELRPLEDFYKALPPLEGPRAASAAEVESVTXXXXXXXXXXXXXXXXXIMRAWAERFVAPLKLCPFAGSATRPLHVYASAAXXXXXXXXXXXDDSTPTFDAIMRALAAVWQAAEAFDDDMQRAXXXXXXXXXXXXXXXRATALVPLPALRALHWPVFEAFCELATTGLRARGTPLAAAAAASRWRRCVRTATTRARSRRRAAATRRTCGGARXXXXXXXXXXXXXXXXXXXXXPPSSARSLRRWAGDRNFVR
Sbjct:    1 MAASLLAGTRLCLSNAAAGAPGRQRTTVMKVVHRASAAFQHAGNAHVCTAAAAAVCPRPYVSKPQRSYCSAGHRRSPVVHGPIQQQQXXXXXXXXXXXXXXXXXXXXXXXDPEVVWVEQRIQMFAAENGGAMPSEEQVEQWRGSAKLFMMLCMGFERRTGQAMNEARAGVLQAFVDDVRTRTYYAQELVIMAELETEWKRDHGKEATRADDKKLAAMCFERLAEDKQMLAGAFNALDLLCTAAAPLVLLLHPYKYTGVLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSTLVYCSNAQFGRRDFEAAQDEMCAALTAVDVDAQEREAAAKEERHQMEQETEQHQFQMLTNARRAFTEAYGREPAINELQGTLASALVPELLGFAASEELRPLEDFYKALPPLEGPRAASAAEVESVTXXXXXXXXXXXXXXXXXIMRAWAERFVAPLKLCPFAGSATRPLHVYASAAXXXXXXXXXXXDDSTPTFDAIMRALAAVWQAAEAFDDDMQRAXXXXXXXXXXXXXXXRATALVPLPALRALHWPVFEAFCELATTGLRARGTPLAAAAAASRWRRCVRTATTRARSRRRAAATRRTCGGARXXXXXXXXXXXXXXXXXXXXXPPSSARSLRRWAGDRNFVR 639

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|339730 vs. uniprot

BLAST of jgi.p|Trimin1|339730 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A836C6K2_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_98	contig	Contig_98:296516..304030 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|339730\|MIX48493_4_7
Hectar predicted targeting category	signal peptide
TranscriptId	340052
Track	FilteredModels1
ProteinId	339730

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|339730	gene_14909	Tribonema minus UTEX_B_3156	gene	Contig_98 296516..304030 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|339730	Trimin1\|339730\|MIX48493_4_7	Tribonema minus UTEX_B_3156	polypeptide	Contig_98 296544..304030 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_14909_1	exon_14909_1	Tribonema minus UTEX_B_3156	exon	Contig_98 296516..296954 +
exon_14909_2	exon_14909_2	Tribonema minus UTEX_B_3156	exon	Contig_98 298235..298396 +
exon_14909_3	exon_14909_3	Tribonema minus UTEX_B_3156	exon	Contig_98 298796..298959 +
exon_14909_4	exon_14909_4	Tribonema minus UTEX_B_3156	exon	Contig_98 299032..299204 +
exon_14909_5	exon_14909_5	Tribonema minus UTEX_B_3156	exon	Contig_98 299886..300016 +
exon_14909_6	exon_14909_6	Tribonema minus UTEX_B_3156	exon	Contig_98 301828..301981 +
exon_14909_7	exon_14909_7	Tribonema minus UTEX_B_3156	exon	Contig_98 303182..303239 +
exon_14909_8	exon_14909_8	Tribonema minus UTEX_B_3156	exon	Contig_98 303364..304030 +

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_14909	UTR5_14909	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_98 296516..296543 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_14909	CDS_14909	Tribonema minus UTEX_B_3156	CDS	Contig_98 296544..296954 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_98:296516..304030+
coding sequence from alignment at Contig_98:296516..304030+

spliced messenger RNA

>mRNA_14909 ID=mRNA_14909|Name=jgi.p|Trimin1|339730|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1948bp|location=Sequence derived from alignment at Contig_98:296516..304030+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GGAAGGATCCCTGAAGCTGCAAGCAGCCATGGCCGCCTCTCTGCTTGCAG
GCACCCGGCTTTGTCTGTCCAATGCTGCTGCGGGCGCACCAGGTCGGCAG
CGGACAACGGTGATGAAAGTGGTGCACCGCGCTAGTGCTGCCTTTCAACA
CGCTGGAAATGCCCATGTTTGCACAGCAGCGGCTGCTGCGGTGTGTCCGC
GGCCATACGTGTCGAAGCCTCAGCGTAGTTACTGCAGCGCTGGGCATCGG
CGCAGTCCTGTTGTACACGGACCAATCCAGCAGCAGCAGCAGCAGCAGCA
GCCGTCCAGGACCATGTCGGGAATGTCGGGAATGTCCGAATCAGAAGAAC
CCGAAGAAGACCCGGAGGTTGTTTGGGTGGAGCAGCGGATACAGATGTTT
GCGGCAGAGAATGGCGGGGCGATGCCATCAGAAGAGCAGGTTGAGCAGTG
GCGCGGCAGCGCCAAGCTCTTCATGATGCTGTGCATGGGCTTTGAACGGC
GCACGGGGCAGGCCATGAACGAGGCGCGCGCGGGGGTGCTGCAGGCGTTT
GTGGATGACGTGCGGACGCGCACATACTACGCGCAGGAGCTCGTCATCAT
GGCAGAGCTGGAGACGGAGTGGAAGCGCGACCACGGCAAGGAGGCCACGA
GGGCCGACGACAAGAAGCTGGCGGCCATGTGTTTCGAGCGCCTCGCGGAG
GACAAGCAGATGCTAGCGGGTGCGTTCAATGCGCTGGACTTACTGTGTAC
TGCTGCTGCACCCCTTGTACTGCTGCTGCACCCTTACAAGTACACTGGTG
TACTGTTGGCGGCCACGCGCTTTGAGCGCCTCGCGGAGGACAAGTACATG
CTAGCGGGAGCGTGCGATGTGCTGGACTGCTGCTACACCACTGTGAGTAC
ACTGGTGTACTGCTCGAACGCCCAGTTTGGACGGAGAGACTTTGAGGCCG
CCCAGGATGAGATGTGCGCGGCGCTCACCGCGGTGGACGTGGACGCGCAG
GAGCGCGAGGCAGCGGCCAAAGAGGAGCGTCACCAGATGGAGCAGGAGAC
AGAGCAGCACCAGTTTCAGATGCTGACGAACGCGCGCCGCGCATTCACGG
AGGCGTACGGGCGCGAGCCCGCCATCAACGAGCTGCAGGGCACGCTCGCG
TCGGCGCTCGTGCCGGAGCTGCTGGGGTTTGCCGCTTCGGAGGAGCTGCG
CCCCCTGGAGGACTTCTACAAGGCCTTACCCCCGCTCGAGGGCCCCCGTG
CTGCGAGCGCCGCCGAGGTGGAGAGCGTGACCCTTCCCCCCCTCGAGGGC
CCCCGCGAAGCGAGCGCCGAGCAGGTCGAGAGCATCATGCGCGCGTGGGC
GGAGCGCTTCGTCGCGCCGCTCAAGCTCTGCCCCTTTGCCGGCAGCGCGA
CGCGCCCGCTGCACGTCTACGCCTCTGCCGCCGCCGCCTCTGCCGCCGCC
GGCGTTGCCGCCGCCGACGATTCGACGCCCACCTTCGACGCCATCATGCG
TGCGCTCGCCGCCGTCTGGCAGGCCGCGGAGGCCTTCGACGACGACATGC
AGCGCGCGCACGGCGGCGGCGGCGACGCGGCAGCCGCGGCGGCGGCGGCG
GCGCGCGCCACGGCGCTCGTCCCGCTCCCCGCGCTGCGCGCGCTGCACTG
GCCCGTCTTCGAGGCGTTCTGCGAGCTCGCGACGACGGGGCTGCGCGCGC
GCGGCACACCGCTGGCGGCGGCGGCGGCGGCGTCGCGCTGGCGCCGCTGC
GTGCGCACGGCTACCACCCGCGCGCGCTCGCGGCGCCGCGCGGCGGCGAC
GCGGCGCACCTGCGGCGGCGCGCGCCGTGGCCGACGGTGCACCTCGTGCG
GCGCGACGCGCTGGCGGCGGCGGGCGCGGGCATCAGCGCCGCCGAGTTCG
GCGCGCAGCTTGCGGAGGTGGGCTGGGGACCGCAATTTTGTACGTTAA

protein sequence of jgi.p|Trimin1|339730

>Trimin1|339730|MIX48493_4_7 ID=Trimin1|339730|MIX48493_4_7|Name=jgi.p|Trimin1|339730|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=640bp
MAASLLAGTRLCLSNAAAGAPGRQRTTVMKVVHRASAAFQHAGNAHVCTA
AAAAVCPRPYVSKPQRSYCSAGHRRSPVVHGPIQQQQQQQQPSRTMSGMS
GMSESEEPEEDPEVVWVEQRIQMFAAENGGAMPSEEQVEQWRGSAKLFMM
LCMGFERRTGQAMNEARAGVLQAFVDDVRTRTYYAQELVIMAELETEWKR
DHGKEATRADDKKLAAMCFERLAEDKQMLAGAFNALDLLCTAAAPLVLLL
HPYKYTGVLLAATRFERLAEDKYMLAGACDVLDCCYTTVSTLVYCSNAQF
GRRDFEAAQDEMCAALTAVDVDAQEREAAAKEERHQMEQETEQHQFQMLT
NARRAFTEAYGREPAINELQGTLASALVPELLGFAASEELRPLEDFYKAL
PPLEGPRAASAAEVESVTLPPLEGPREASAEQVESIMRAWAERFVAPLKL
CPFAGSATRPLHVYASAAAASAAAGVAAADDSTPTFDAIMRALAAVWQAA
EAFDDDMQRAHGGGGDAAAAAAAAARATALVPLPALRALHWPVFEAFCEL
ATTGLRARGTPLAAAAAASRWRRCVRTATTRARSRRRAAATRRTCGGARR
GRRCTSCGATRWRRRARASAPPSSARSLRRWAGDRNFVR*

mRNA from alignment at Contig_98:296516..304030+

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_14909 ID=mRNA_14909|Name=jgi.p|Trimin1|339730|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=7515bp|location=Sequence derived from alignment at Contig_98:296516..304030+ (Tribonema minus UTEX_B_3156 )
GGAAGGATCCCTGAAGCTGCAAGCAGCCATGGCCGCCTCTCTGCTTGCAG
GCACCCGGCTTTGTCTGTCCAATGCTGCTGCGGGCGCACCAGGTCGGCAG
CGGACAACGGTGATGAAAGTGGTGCACCGCGCTAGTGCTGCCTTTCAACA
CGCTGGAAATGCCCATGTTTGCACAGCAGCGGCTGCTGCGGTGTGTCCGC
GGCCATACGTGTCGAAGCCTCAGCGTAGTTACTGCAGCGCTGGGCATCGG
CGCAGTCCTGTTGTACACGGACCAATCCAGCAGCAGCAGCAGCAGCAGCA
GCCGTCCAGGACCATGTCGGGAATGTCGGGAATGTCCGAATCAGAAGAAC
CCGAAGAAGACCCGGAGGTTGTTTGGGTGGAGCAGCGGATACAGATGTTT
GCGGCAGAGAATGGCGGGGCGATGCCATCAGAAGAGCAGGTGAGGGCTAG
ACTTGTCAACATCCCTTTGGCATCAAGGACGGCCAAGCCGGGGACTGCGT
CCTTCATCGAAATTAAACAGTTGTGAAAGTTCTTGCATGAGCACCACACC
ACACAATGGCTGCCGCCATGCAGCAGCGGCGGCCAGTGGTGGCAATTGAC
GTCGGCGGCGCTCTGGCAGTGAGCGCGCTCGTAGAGGTTTTTGACCCGCC
TGCAGTGGCAGTGCTCAGTACATACCTACATACAGTCTCTCGCGGCCTTG
ACTATACAGATAGAAGGAACGTCAGGCAAAGCAGTCGTACCTCATCGGTG
CGAAGGATGCGCGGCGGTGAGTGGCAGGACGCCTGTAGCTAACCGTAACC
CTAACCTTAAGCATGCCTCTGACGACACGCGCATCAGCGAAACAGAAGTA
TCGGTTGTAGATACCCACGTACAGCCTGCGTACTCTGAAGTATACGTTTC
ACGTATGAGTAGTTGCTTCTCTCTCTGGCGGTCTCACCTGCGCCGCAGAC
AGCGTACATGACAGCAGCCTTTCTTGCGCCTCTGAGGTTGACGTCTGAGC
AGGACGTTGGTCTTCGCTCTGAACGCATGTCGCTGACTGTCGCGTACTGT
TTCTAGGATTTCCGTGACGGTTGGCTCTGCTGCCTCACTCCTGACGCGGC
TGCGTCGCGGCGCCTGCGCGTGCATCTAGGGGCTAGGTTTAGGGTTAGGG
TTAGGGTTAGCAAAAAACGGGGATGCCACGGCTTGGCGCCTGCTGCAGCA
TCTGGGCCAGGTGCCCCAGCCATGAGTGGATTGCTGTTTCAAGTGTACTT
GCGGACGCGCGGAGACCATTAGTAATCTGCAAAGTGGGTCATGAGAGCTG
CACACACAGGGGTGAGGGCACGTTGAACTTGAAGTTCATGACACTGAGCC
AACTTTCAGAGCATGCAGATGGACAGTGGCGAGCCCGCACCTGTGCATCG
ACAGGTTGAAAGCATCGCTTGTTTGTGATTCGCAACGGTGATCAATTGCA
GCCGCCGCCGCCGCGCCCCACGGCTCGCCAGCCTATGTGCATGTAGATCC
CAGGGCAGCAGGGGCACTGGACCTCTGCTACACCCCCCCTTCGCCCCAGT
ACTTGCACACACTCAAGAACCCACTTTCCACAGGCCCTCTTCCCCTTGCA
GATCGAACAGCGGCGCTGCAGTGCCAAGGGGCGACAGTATCACCACTGCA
GTCCCCCCCCCCCCCGGCCTGCCTCTTTACTCACGCCCCCCCTCACCCCC
CCCCCCTCCTGCCCCTCAGGTTGAGCAGTGGCGCGGCAGCGCCAAGCTCT
TCATGATGCTGTGCATGGGCTTTGAACGGCGCACGGGGCAGGCCATGAAC
GAGGCGCGCGCGGGGGTGCTGCAGGCGTTTGTGGATGACGTGCGGACGCG
CACATACTACGCGCAGGAGCTCGTCATCATGGTACGCATATACCTTGCTG
GTGTGGGACGGCGCTACATACATACATACATGCACGGAACGCCTGTGTGT
CTGTACATGTTCTTCATTCCATGAATATGCTTCCTCTGTTCCAGTTCATC
AGGTAGATCACTGAAACGCCATGTTGAAGTCGGAGTGTGTGCTGCGTGCA
TGTGTATCTATGTGCAGGCGGATCTGGAGAAGCAGTGACAATTCCTCTAA
GTCCGAGTGTGTGCTGCGTGCATGCGCGTGTAGCTTGAGTTACCAATCAG
CATCAAGTTCTTGGCATCACTGGTGGAAGGCACTTGCGGCTAACCATCCC
TTGTCACCTAGAGCACTACGATCTTTCGATTCGTTTTCATGAGTATGTGA
TTTTGACTTTTTTATAATTAATGCGTGCAGGCAGAGCTGGAGACGGAGTG
GAAGCGCGACCACGGCAAGGAGGCCACGAGGGCCGACGACAAGAAGCTGG
CGGCCATGTGTTTCGAGCGCCTCGCGGAGGACAAGCAGATGCTAGCGGGT
GCGTTCAATGCGCTGGACTTACTGTGTACTGCTGCTGCACCCCTGTGAGT
ACACCGGTGCACTGCTCGAGCGCCCATGTTGTGCTGGCGGGTGCGTGCTT
TGCGCTGGACTCTCAGTGTACTGCTGCTGCACCCTTACAAGTACACTGGT
GTACTGTTGGCGGCCACGCGCTTTGAGCGCCTCGCGGAGGACAAGTACAT
GCTAGCGGGAGCGTGCGATGTGCTGGACTGCTGCTACACCACTGTGAGTA
CACTGGTGTACTGCTCGAACGCCCAGTTTGGACGGAGAGGTGCTGGCGGG
GCGGTTGCGTGCTATGTGCTGGACTCTCGGCGTACTGCTACTGCACCCCC
ACAAATACACCGTTGTACTCTAATGAGGGCCTCTTGGCAGGTGCCTGCAC
GCCAAAAGCAGGAACCGATGAAGCGCCTCTGTGTAGACAACACCAACTAC
TCCCGTGCATGGCATGCATATGTATCTGGGTACTTTTGTATCATTCTCCA
ATGCCCATGGTGCAGGACACCATATACATATGCGTCAGCCATCACTGGCA
TCAGCCGTGGGCGCTTGGAACGTTCATGCCAGTGCGCCCCCCCCCCCCCC
CCCCCTCCCCCTCCCCTCAAACTGCTGCGGCCGCGCGCGCGCACTTCAAC
TGTGTGCGTACTTCATGGCCGCCCTGGCACGTATCATGACATCCTTCATG
GTCGCCAGGCGCAGCAAGCAGCCTCTCTTTCTCTCCAACTGATTCTCCCC
CCCACACACACACATGCACACACCCCCACCCCTCCCACCCACCCCCGTGT
CTGGTGCCGTTGCGTGCAGACTTTGAGGCGGCGCAGGAGGACACGTGCGC
GGCGCTCACCGCAACTGATTTCTGCCTTGCCCCCCCCCGCCCCCGCGCGC
CATCACACCCCTAACAACCCCCCCCCCCCCCCCCCACCCCCACCTCCGGT
GTGGTTGCGTGCGCGCATAGACTTTGAGGCCGCCCAGGATGAGATGTGCG
CGGCGCTCACCGCGGTGGACGTGGACGCGCAGGAGCGCGAGGCAGCGGCC
AAAGAGGAGCGTCACCAGATGGAGCAGGAGACAGAGCAGCACCAGTTTCA
GGTATTCTGTTTGATGTGTATGTGTGTGTGTGTGTGCGTCACTCGTTGGG
TTAGGGTTAGGATTAGGCTAGCTTCTGTGCGGCCAAGGCGGAGCGCCACC
AGCAGGAGCGGGAGGCAGAGCAGCACCAGATACAGCTTCCATGTGCGTAT
CAGTGCCATTTTGTGTTGTAAGGGGAGGAGCCTAACCCTAACCCTAACCC
ACGTGCTATGCGCCACGTGCTAAGTCTCAACGCCGTACCCTGGTTACAAG
ACAGACCCTAATCCTAACCCTAACCCTAGGTCTCAGCACTGTACTTGATC
AGACGACACACGCCGTTGACCTAGTCTCAAGGGGGGAAGGTAGGGCACGA
CGCGCGAGCCGCGGCAGCACAATCATCATCTTAGGGTTGCACCAGCTAAA
GGCGGAGTGCAGTCACCACGTGTGTGTCTGCTTCTCTCATGTCCACTACG
TAATGTCAATATATCCGCGTGCAGGCGCCCGCGCGCCGTCTTACGTAACC
CTAAATCTGACCCTTACCCTGACCCTCACAGGACGAGCGCGCCGCATCCT
GCTTAGGGTTAGGGTTAGGGTATGTATGACGCAACTGCGACTGCAACTGC
AAACTGAGTTAGATATGCCGCTTCGGCAACGTGCGCTTGCTAACCCTAAC
CCTAAGTAGCTGTACACAAGCTGAGGCGGTGTCCGCTCGCGCTTCAGCGC
CAGTGTTAATTCACCTGCAGCCACGGCTCGCCCTGTGACGCGAGTCGCAC
CGTGACTCGACTCGCACTGCGACTTGACTTGCACCGCGTCTCGTCCCACA
TAACTGCCATGGCGGACGGCAAGAAGCGCTGTGATACGCATAGAGCTATG
CCGGCAGCCGCCACAACCATCAGCAGCGAGCCCCACTCCCGTTTGTGCCT
GAGTAGCGCGTGCTGACCCACCCCCCCCACACACACACCACACACACACA
CCCTTCGTTTATCCGCCCCTCCCCCTCTTTATCGCACACCGCCTTGCTGC
CCCCCCCCCCCCCCCCCCCCTCACACACACTCACACCCAAGAGGTGGCAG
GCGTTTGCGGGTTCGCCATTGACCCGCTCTGGTTTGTGTGCTGTGCAGGC
TGATTCGGCCTGGCTGATCAATGCCCCCCCCCCCCCCCCCCCCCCTTCAT
TTGTATTGCGCCCCGCGCCCCCGGATGCAAACGAATGCGCGCCGGGCATC
TGCGGAGATGTTCAAACCCCAATCCTAACCCTAAGCACGAGCCCGTCGTC
GACAAGCGTGACTGAAGGGTCTGTGGCATACGTAGATCTGCTCCATGAGC
CGCCACTAACTGAATCCGGAGCCTCTCCGCTTTGAATCGCGTTCAGGCTG
ATCAAGCTGGCTGACACCCCCCCCCCACTTCCCTTCCTCGTCTCGTGCAC
CCAACCCCCCCCGTCTCAGATGCTGACTAACGCGCGCCGCGCATTTGCGG
AGACGTACGGGCGCGAGCCCGCAGGCTGATCACCCCCCTTCTCCCCATGC
CGATTGCGTGCGCCCCCCCCCCGTGCAGGCTGACCACCCCCCCCCCCCCC
TTTTCCCTCCCTTCTTTCTCAAACTGCCCCCCTCAGATGCTGACGAACGC
GCGCCGCGCATTCACGGAGGCGTACGGACGCGAGCCTGCTATCAACAGCA
CTGACTAAAGCGTCCACTACAGACAGACGTAGGTCTGCTCCGAGATCCGG
AGCGGCTCCGGTTTGTCGCGTACAGGCTGATCACCCCCCCCACCCCACCC
CCCCCCCCCCTTCTTCCCTTCCTCGTTTCTTGCCCCCCCCCCCCCCCCCC
CCCTTCCCTCAGATGCTGACGAACGCGCGCCGCGCATTCACGGAGGCGTA
CGGGCGCGAGCCCGCCATCAACGAGCTGCAGGGCACGCTCGCGTCGGCGC
TCGTGCCGGAGCTGCTGGGGTTTGCCGCTTCGGAGGAGCTGCGCCCCCTG
GAGGACTTCTACAAGGGTATGTTTGTATAAGAAATGGAGCAGTGGCAGTG
CTCCGCATCAGCGCTCGCTTCCGACTTTAATGAGCTGCCGCCCCCGAAGG
CATGTAGAAGTATGTGGACATGGTGGCACTGTTTGACTCGTGGCCAACGA
CTGCAGCAGCGACGACTGCGGTTGTTGGTGGAAGGCACTTGCGGCTAACC
ACTCCTAGAGCTCTACGATCTTTGGATTCGTTTCCATGCATGCATCAGCA
GCGGCGGGAGTGCTCATGGCATCTAACTCCAACCTTTAATCACCGCGTCG
GGAGGAGCTGCGGCCTGCTCAGGAGTTCCACAAGGGCAACTGCCGCGCTA
TTAGCACGTTATAGCAGCAGAAAAACACCAGCACTCTTTCTAGCCTCAAG
TTGTACTTGCTGCACTGGAAGAGCTGGACGCACCCAGCCCAAAAATCATA
TTCCTTGCACGACCGCAAACCCTACCCTTGGGTCTCAATGGTCCATCGTC
TGAGCACTGCCCCACATGAATATTGTACTTTGAAGTAAGTGCGGTGTGAG
TGACGTGCCAGCATTTTTGCTAATGGAGCATCACCTCCTCCCCCCCCAGC
AGACCCCCGCAAGCCATTCACGGCAGAGAGATCCTTTGTACGGCGCGCGT
CTATGCTGCTTTGTGACCGCAACTTCAACATGCCAACTTCAACATCTGAT
GCTGCGCGTACAACTGCGGCTTACACCTGCCCACTCCCCCCCACCCCCAC
ACACACGCAGCCTTCCCCCCGCTCAAGAGCGCCCAAATCACCAGCGCCGC
TGAGGCGGAGAGCGTCACGCGCGCGTGCAATGACTGCAGCTCACACCGGC
CGCCATGCCGTGTGTACCCCCATCCCTTGCCCCCCCCCTCCCCCTTCTTC
ACGCTCACAGCCCCTGCCTTCCGTCCCCCTTGCCCGCCCTACGCGGCACG
CAGCCTTGCCTCAACAGCACCCCCCCCCCCTTGCCCCACTAACAGACCCT
GCTCCCACCCGCCCACCCACCCACACATACACGCACACACGCGCATGCAG
CCTTCGCCCCACTCGAATGTCCCCCCCCCCCCCCCCTCTCCCCCCATACA
GACACATGCACGCAGCCTTACCCCCGCTCGATCGCGCCCCCCTGCCGCCC
TAACAGCCTTCCCCCGCCCCCCCCCCCCCCCCCCCCCCCGCGCGCCCCAC
ACGCATATGCACGCAGCCTTACCCCCGCTCGAGGGCCCCCGTGCTGCGAG
CGCCGCCGAGGTGGAGAGCGTGACGTAAGCGTGCATTGATAGCACACCGG
CCGCCGTGCCTTACCCCCATTTCTGCCCCCTGGCCCCACTAATAAATCCT
GCCTGCCCCCCCCCCCCCCCCCCCCCCTTCCGCGCCCCCCGCACGCAGCC
TTCCCCCCCTCGAGGGCCCCCGCGAAGCGAGCGCCGAGCAGGTCGAGAGC
ATCATGCGCGCGTGGGCGGAGCGCTTCGTCGCGCCGCTCAAGCTCTGCCC
CTTTGCCGGCAGCGCGACGCGCCCGCTGCACGTCTACGCCTCTGCCGCCG
CCGCCTCTGCCGCCGCCGGCGTTGCCGCCGCCGACGATTCGACGCCCACC
TTCGACGCCATCATGCGTGCGCTCGCCGCCGTCTGGCAGGCCGCGGAGGC
CTTCGACGACGACATGCAGCGCGCGCACGGCGGCGGCGGCGACGCGGCAG
CCGCGGCGGCGGCGGCGGCGCGCGCCACGGCGCTCGTCCCGCTCCCCGCG
CTGCGCGCGCTGCACTGGCCCGTCTTCGAGGCGTTCTGCGAGCTCGCGAC
GACGGGGCTGCGCGCGCGCGGCACACCGCTGGCGGCGGCGGCGGCGGCGT
CGCGCTGGCGCCGCTGCGTGCGCACGGCTACCACCCGCGCGCGCTCGCGG
CGCCGCGCGGCGGCGACGCGGCGCACCTGCGGCGGCGCGCGCCGTGGCCG
ACGGTGCACCTCGTGCGGCGCGACGCGCTGGCGGCGGCGGGCGCGGGCAT
CAGCGCCGCCGAGTTCGGCGCGCAGCTTGCGGAGGTGGGCTGGGGACCGC
AATTTTGTACGTTAA

Coding sequence (CDS) from alignment at Contig_98:296516..304030+

>mRNA_14909 ID=mRNA_14909|Name=jgi.p|Trimin1|339730|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1920bp|location=Sequence derived from alignment at Contig_98:296516..304030+ (Tribonema minus UTEX_B_3156 )
ATGGCCGCCTCTCTGCTTGCAGGCACCCGGCTTTGTCTGTCCAATGCTGC
TGCGGGCGCACCAGGTCGGCAGCGGACAACGGTGATGAAAGTGGTGCACC
GCGCTAGTGCTGCCTTTCAACACGCTGGAAATGCCCATGTTTGCACAGCA
GCGGCTGCTGCGGTGTGTCCGCGGCCATACGTGTCGAAGCCTCAGCGTAG
TTACTGCAGCGCTGGGCATCGGCGCAGTCCTGTTGTACACGGACCAATCC
AGCAGCAGCAGCAGCAGCAGCAGCCGTCCAGGACCATGTCGGGAATGTCG
GGAATGTCCGAATCAGAAGAACCCGAAGAAGACCCGGAGGTTGTTTGGGT
GGAGCAGCGGATACAGATGTTTGCGGCAGAGAATGGCGGGGCGATGCCAT
CAGAAGAGCAGGTTGAGCAGTGGCGCGGCAGCGCCAAGCTCTTCATGATG
CTGTGCATGGGCTTTGAACGGCGCACGGGGCAGGCCATGAACGAGGCGCG
CGCGGGGGTGCTGCAGGCGTTTGTGGATGACGTGCGGACGCGCACATACT
ACGCGCAGGAGCTCGTCATCATGGCAGAGCTGGAGACGGAGTGGAAGCGC
GACCACGGCAAGGAGGCCACGAGGGCCGACGACAAGAAGCTGGCGGCCAT
GTGTTTCGAGCGCCTCGCGGAGGACAAGCAGATGCTAGCGGGTGCGTTCA
ATGCGCTGGACTTACTGTGTACTGCTGCTGCACCCCTTGTACTGCTGCTG
CACCCTTACAAGTACACTGGTGTACTGTTGGCGGCCACGCGCTTTGAGCG
CCTCGCGGAGGACAAGTACATGCTAGCGGGAGCGTGCGATGTGCTGGACT
GCTGCTACACCACTGTGAGTACACTGGTGTACTGCTCGAACGCCCAGTTT
GGACGGAGAGACTTTGAGGCCGCCCAGGATGAGATGTGCGCGGCGCTCAC
CGCGGTGGACGTGGACGCGCAGGAGCGCGAGGCAGCGGCCAAAGAGGAGC
GTCACCAGATGGAGCAGGAGACAGAGCAGCACCAGTTTCAGATGCTGACG
AACGCGCGCCGCGCATTCACGGAGGCGTACGGGCGCGAGCCCGCCATCAA
CGAGCTGCAGGGCACGCTCGCGTCGGCGCTCGTGCCGGAGCTGCTGGGGT
TTGCCGCTTCGGAGGAGCTGCGCCCCCTGGAGGACTTCTACAAGGCCTTA
CCCCCGCTCGAGGGCCCCCGTGCTGCGAGCGCCGCCGAGGTGGAGAGCGT
GACCCTTCCCCCCCTCGAGGGCCCCCGCGAAGCGAGCGCCGAGCAGGTCG
AGAGCATCATGCGCGCGTGGGCGGAGCGCTTCGTCGCGCCGCTCAAGCTC
TGCCCCTTTGCCGGCAGCGCGACGCGCCCGCTGCACGTCTACGCCTCTGC
CGCCGCCGCCTCTGCCGCCGCCGGCGTTGCCGCCGCCGACGATTCGACGC
CCACCTTCGACGCCATCATGCGTGCGCTCGCCGCCGTCTGGCAGGCCGCG
GAGGCCTTCGACGACGACATGCAGCGCGCGCACGGCGGCGGCGGCGACGC
GGCAGCCGCGGCGGCGGCGGCGGCGCGCGCCACGGCGCTCGTCCCGCTCC
CCGCGCTGCGCGCGCTGCACTGGCCCGTCTTCGAGGCGTTCTGCGAGCTC
GCGACGACGGGGCTGCGCGCGCGCGGCACACCGCTGGCGGCGGCGGCGGC
GGCGTCGCGCTGGCGCCGCTGCGTGCGCACGGCTACCACCCGCGCGCGCT
CGCGGCGCCGCGCGGCGGCGACGCGGCGCACCTGCGGCGGCGCGCGCCGT
GGCCGACGGTGCACCTCGTGCGGCGCGACGCGCTGGCGGCGGCGGGCGCG
GGCATCAGCGCCGCCGAGTTCGGCGCGCAGCTTGCGGAGGTGGGCTGGGG
ACCGCAATTTTGTACGTTAA