mRNA_14855 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|14578 vs. uniprot
Match: A0A835ZCK1_9STRA (Heat shock protein 40 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCK1_9STRA) HSP 1 Score: 683 bits (1762), Expect = 3.130e-245 Identity = 367/367 (100.00%), Postives = 367/367 (100.00%), Query Frame = 3 Query: 6 MGVLACLLLLLGALAVAAARDFYAILGLKKTASDSEIKKAYRQLSLKYHPDKNKSEDAATHFAEVASAYEVLSDPDKRSTYDNYGEEGLKQQEXXXXXXXXXXXXXXXXXXXXGFPGQRARDEVPRTANVEVPLRVSLRQLYSGDAFEASFVRQVMCLRAAECEKRCPECMGPGVAMRTQKIAPGFVQQIQMRDDRCVARGKCWNKRCTACPNGPTEPESVPLTVEVQKGMQDGEHIVFEESADEAAGHKPGDLVLTIDTLPHAEFARHGDDLFMEMDIDLLDALVGFETGFAHLDGRRVPVKQTGVTAPGTTRVLSGEGMPRRNPRGQGSHGDLTIRFNVVFPKHLSPDQQRSIREVLGAATAAAA 1106 MGVLACLLLLLGALAVAAARDFYAILGLKKTASDSEIKKAYRQLSLKYHPDKNKSEDAATHFAEVASAYEVLSDPDKRSTYDNYGEEGLKQQEXXXXXXXXXXXXXXXXXXXXGFPGQRARDEVPRTANVEVPLRVSLRQLYSGDAFEASFVRQVMCLRAAECEKRCPECMGPGVAMRTQKIAPGFVQQIQMRDDRCVARGKCWNKRCTACPNGPTEPESVPLTVEVQKGMQDGEHIVFEESADEAAGHKPGDLVLTIDTLPHAEFARHGDDLFMEMDIDLLDALVGFETGFAHLDGRRVPVKQTGVTAPGTTRVLSGEGMPRRNPRGQGSHGDLTIRFNVVFPKHLSPDQQRSIREVLGAATAAAA Sbjct: 1 MGVLACLLLLLGALAVAAARDFYAILGLKKTASDSEIKKAYRQLSLKYHPDKNKSEDAATHFAEVASAYEVLSDPDKRSTYDNYGEEGLKQQEXXXXXXXXXXXXXXXXXXXXGFPGQRARDEVPRTANVEVPLRVSLRQLYSGDAFEASFVRQVMCLRAAECEKRCPECMGPGVAMRTQKIAPGFVQQIQMRDDRCVARGKCWNKRCTACPNGPTEPESVPLTVEVQKGMQDGEHIVFEESADEAAGHKPGDLVLTIDTLPHAEFARHGDDLFMEMDIDLLDALVGFETGFAHLDGRRVPVKQTGVTAPGTTRVLSGEGMPRRNPRGQGSHGDLTIRFNVVFPKHLSPDQQRSIREVLGAATAAAA 367
BLAST of jgi.p|Trimin1|14578 vs. uniprot
Match: A0A835Z111_9STRA (J domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z111_9STRA) HSP 1 Score: 441 bits (1133), Expect = 4.970e-148 Identity = 246/398 (61.81%), Postives = 285/398 (71.61%), Query Frame = 3 Query: 51 VAAARDFYAILGLKKTASDSEIKKAYRQLSLKYHPDKNKSEDAATHFAEVASAYEVLSDPDKRSTYDNYGEEGLKQQEXXXXXXXXXXXXXXXXXXXXGFPGQRARDEVPRTANVEVPLRVSLRQLYSGDAFEASFVRQVMCLRAAECEKRCPECMGPGVAMRTQKIAPGFVQQIQMRDDRCVARGKCWNKRCTACPNGPTEPESVPLTVEVQKGMQDGEHIVFEESADEAAGHKPGDLVLTIDTLPHAEFARHGDDLFMEMDIDLLDALVGFETGFAHLDGRRVPVKQTG---VTAPGTTRVLSGEGMP---RRNPRGQGSHGDLTIRFNVVFPKHLSPDQQRSIREVLGAAT----AAAA*LD*CCFLRFFRLPSVGIHPVQLCSGRGSAAALRLC 1214 V+ +D+Y +LG+ + AS+++IKKAYR+LSLKYHPDKN SEDAATHFAEVA+AYEVLSD DKRSTYDNYGEEGLK++ XXXXXXXXX GFPGQR RDEV RT +V +PLRVSLRQLY+GD FE FVRQVMCLRA ECE +CPEC GPG+A+RTQ++ PGFVQQ+Q+RDDRCVARG+CWN+RC ACP G TEPE LTV++ KG +DGE IVFEE ADEAAGHKPGDLVLT+ TLPH +F R GDDLF+++D+ L+DALVGFET HLDG V V + VTAPG VL+GEGMP R G L I+FNVVFP+ LS QQ IR VLG AAAA R R P L SGRG A C Sbjct: 25 VSGGKDYYDVLGVARGASEADIKKAYRKLSLKYHPDKNPSEDAATHFAEVATAYEVLSDADKRSTYDNYGEEGLKRR---XXXXXXXXXDPFDSFFNFGFPGQRRRDEVQRTKDVHLPLRVSLRQLYTGDVFEVHFVRQVMCLRAGECETKCPECHGPGLAVRTQRLGPGFVQQMQVRDDRCVARGRCWNRRCAACPRGATEPEGADLTVDLHKGARDGEKIVFEEMADEAAGHKPGDLVLTVSTLPHPDFTRRGDDLFLDLDVPLVDALVGFETTVVHLDGHAVRVSRGAGGAVTAPGDVLVLAGEGMPLTARAAAAAGRERGALHIKFNVVFPRALSAAQQAQIRAVLGEGAGRRGAAAA-------ARTARAP--------LRSGRGGVRARTAC 404
BLAST of jgi.p|Trimin1|14578 vs. uniprot
Match: D7G5P1_ECTSI (Heat shock protein 40 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5P1_ECTSI) HSP 1 Score: 391 bits (1005), Expect = 9.760e-130 Identity = 198/344 (57.56%), Postives = 241/344 (70.06%), Query Frame = 3 Query: 51 VAAARDFYAILGLKKTASDSEIKKAYRQLSLKYHPDKNKSEDAATHFAEVASAYEVLSDPDKRSTYDNYGEEGLKQQEXXXXXXXXXXXXXXXXXXXXGFPGQRARDEVPRTANVEVPLRVSLRQLYSGDAFEASFVRQVMCLRAAECEKRCPECMGPGVAMRTQKIAPGFVQQIQMRDDRCVARGKCWNKRCTACPNGPTEPESVPLTVEVQKGMQDGEHIVFEESADEAAGHKPGDLVLTIDTLPHAEFARHGDDLFMEMDIDLLDALVGFETGFAHLDGRRVPVKQTGVTAPGTTRVLSGEGMPRRNPRGQGSHGDLTIRFNVVFPKHLSPDQQRSIREVL 1082 V+ +D Y +LGL + AS SEIKKAYRQLSLKYHPDKN SEDAAT FAEVASAYEVLSD +KR TYD +GEEGLK+ E GF G R + E RT NVE+PLRVSLRQLY GD F+ +VRQ MC+ A +CEK+C +C GPG+A+R ++ PGFVQQ+Q+RDD C+ARGKCW K C+ACP GPT+ E V LT EVQKGM+D + IVFEE ADE GH+ G LV I+TL H +F R DDL M+M+I L++AL GFE F HLDG V VK+ G+T+PG L EGMPRR G+ + G L IRF++ FPK LS +Q ++R VL Sbjct: 54 VSGQKDLYEVLGLGRGASSSEIKKAYRQLSLKYHPDKNPSEDAATRFAEVASAYEVLSDEEKRDTYDRFGEEGLKRTEQGGSADPFGDMFSHF-----GFGGGRRQREESRTPNVEIPLRVSLRQLYEGDTFDTVYVRQAMCVGAGQCEKKCKDCQGPGIAVRMHQLGPGFVQQVQIRDDNCIARGKCWKKNCSACPKGPTQQEEVILTAEVQKGMRDRDTIVFEEVADEMIGHRAGHLVFIIETLVHPDFTRRNDDLHMDMEIPLVEALSGFEVNFKHLDGHTVKVKKQGITSPGDVMQLKKEGMPRRGSNGK-TFGSLYIRFSIAFPKALSAEQVTTLRGVL 391
BLAST of jgi.p|Trimin1|14578 vs. uniprot
Match: A0A7S2UXH4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXH4_9STRA) HSP 1 Score: 344 bits (882), Expect = 1.460e-111 Identity = 177/348 (50.86%), Postives = 231/348 (66.38%), Query Frame = 3 Query: 48 AVAAARDFYAILGLKKTASDSEIKKAYRQLSLKYHPDKNKSEDAATHFAEVASAYEVLSDPDKRSTYDNYGEEGLKQQEXXXXXXXXXXXXXXXXXXXX--GFPGQRAR-DEVPRTANVEVPLRVSLRQLYSGDAFEASFVRQVMCLRAAECEKRCPECMGPGVAMRTQKIAPGFVQQIQMRDDRCVARGKCWNKRCTACPNGPTEPESVPLTVEVQKGMQDGEHIVFEESADEAAGHKPGDLVLTIDTLPHAEFARHGDDLFMEMDIDLLDALVGFETGFAHLDGRRVPVKQTGVTAPGTTRVLSGEGMPRRNPRGQGSHGDLTIRFNVVFPKHLSPDQQRSIREVL 1082 A A RDFY ILG+ + ASD EIKKAYR+LSL+YHPDKN SEDA++ FA+VA+AYE LSD +KR TYD YGEEGL++ E GF G+R R D RT ++ +PLRVSLRQLY GD F+ +++R+V+C ECEK CP+C GPGV ++TQ++APGFVQQ+Q D CVARGKCW + C ACPNG TE E + LTV++ G+ +G++I FE A E GH PGDLVL + + H F R GDDL ++I L DALVGF T HLDG +V +++ VT G + GEGMP++ G G GD+ + ++ FP LS +Q+ S+RE+L Sbjct: 34 AAAQDRDFYKILGVSRKASDKEIKKAYRKLSLQYHPDKNPSEDASSKFADVAAAYECLSDEEKRKTYDRYGEEGLQKMEARQNAGGGGDPFSSMFEAFGFGGFGGRRGRGDGERRTPDLTLPLRVSLRQLYLGDIFDMTYIREVLCTNHGECEKNCPDCHGPGVRVKTQQLAPGFVQQVQASDPNCVARGKCWRRGCKACPNGQTETEQISLTVDLAPGLAEGDNIRFEGVASEQIGHIPGDLVLLVAPIRHEYFERRGDDLHTTINIPLKDALVGFSTEINHLDGHKVLLRKEDVTYFGQVVKIRGEGMPKKG--GTGGFGDMYVECSITFPAQLSEEQKASLREIL 379
BLAST of jgi.p|Trimin1|14578 vs. uniprot
Match: A0A4D9DAZ8_9STRA (J domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DAZ8_9STRA) HSP 1 Score: 328 bits (841), Expect = 1.090e-105 Identity = 167/345 (48.41%), Postives = 224/345 (64.93%), Query Frame = 3 Query: 60 ARDFYAILGLKKTASDSEIKKAYRQLSLKYHPDKNKSEDAATHFAEVASAYEVLSDPDKRSTYDNYGEEGLKQQEXXXXXXXXXXXXXXXXXXXX--GFPGQ-RARDEVPRTANVEVPLRVSLRQLYSGDAFEASFVRQVMCLRAAECEKRCPECMGPGVAMRTQKIAPGFVQQIQMRDDRCVARGKCWNKRCTACPNGPTEPESVPLTVEVQKGMQDGEHIVFEESADEAAGHKPGDLVLTIDTLPHAEFARHGDDLFMEMDIDLLDALVGFETGFAHLDGRRVPVKQTGVTAPGTTRVLSGEGMPRRNPRGQGSHGDLTIRFNVVFPKHLSPDQQRSIREVLG 1085 A D+Y LG+K++AS SEIKKA+R+LSL HPDKN S DA FA ++AY VLS+ ++R YD GEEGLK+ E GF G R RDE +T NV +PLRVSL+QL++GD E +++RQV+C+ EC K PEC GPGV +R Q +APGF+QQ+Q+RD+ CVARGK W K C+ACPNG T+PE V LTV++Q GM+DGE I F + ADE GH GDLV+ + +PH + RHGDDL + + + LLDALVGFET +DGR V + + VT+ G + + G+GMP+ G G DL I + V FP+ L+ +Q+ +++ L Sbjct: 17 AEDYYKTLGIKRSASQSEIKKAWRKLSLDLHPDKNNSPDAQEKFATASNAYTVLSNEERREVYDREGEEGLKRMEAREAQGSMDPFGGGIFEAFGFGGFGGGGRRRDEEAKTPNVVIPLRVSLKQLFTGDLLEVTYIRQVLCMNHKECTKPAPECQGPGVRLRQQHLAPGFIQQVQVRDETCVARGKAWRKGCSACPNGQTQPEEVKLTVDIQPGMKDGEMITFSDVADEKVGHSAGDLVVHVQAIPHEFYTRHGDDLRVSLKVGLLDALVGFETTVKQVDGRDVKLNKPTVTSHGEVQRVKGQGMPKSGGSGLG---DLLITWEVTFPEALTDEQKALLKKALA 358
BLAST of jgi.p|Trimin1|14578 vs. uniprot
Match: B8BTB9_THAPS (J domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BTB9_THAPS) HSP 1 Score: 323 bits (829), Expect = 1.170e-103 Identity = 175/349 (50.14%), Postives = 223/349 (63.90%), Query Frame = 3 Query: 57 AARDFYAILGLKKTASDSEIKKAYRQLSLKYHPDKNKSEDAATHFAEVASAYEVLSDPDKRSTYDNYGEEGLKQQEXXXXXXXXXXXXXXXXXXXX----GFPGQRARDEVPRTANVEVPLRVSLRQLYSGDAFEASFVRQVMCLRAAECEKRCPECMGPGVAMRTQKIAPGFVQQIQMRDDRCVARGKCWNKRCTACPNGPTEPESVPLTVEVQKGMQDGEHIVFEESADEAAGHKPGDLVLTIDTLPHAEFARHGDDLFMEMDIDLLDALVGFETGFAHLDGRRVPVKQTGVTAPGTTRVLSGEGMPRRNPRGQGSHGDLTIRFNVVFPKHLSPDQQRSIREVLGAA 1091 AA+DFY +LG+ + A+ EIKKAYR SL++HPDKNK E AA FAE+A AYEVL+D +K+ YD +GEEGLKQ E XXXX G G+R R++ T NV+VPLRV+L+QLY GD E +VR +C+ EC K EC GPGV +R Q+IAPGFVQQ+Q RDDRCVARGK W C CPNG T+PE++ L +++QKGM GE + FE +DE G PGDL I + H F R GD L++ M+I L+DAL GF F HLDG + V GVT +SG+GMPRR G+G GDL I F+V FP L+ Q++ IR++LG + Sbjct: 25 AAQDFYKLLGITRKATQKEIKKAYRSKSLEFHPDKNKEEGAAEKFAEIAYAYEVLTDEEKKGIYDRHGEEGLKQHEQRGGXXXXHGGFDDIFSHFGFNFGGGQGRRQREQT--TPNVDVPLRVTLKQLYLGDTIEVEYVRNTLCVNWQECMKANQECQGPGVKVRMQQIAPGFVQQVQQRDDRCVARGKMWRNNCRECPNGQTQPETIELEIDLQKGMYPGEAVTFEGVSDEKPGMNPGDLNFVIVQVGHEFFHRDGDHLYVTMEIPLVDALTGFSHEFTHLDGHKFTVNVDGVTECDHVMRVSGKGMPRRG--GRGGFGDLYITFDVDFPDTLTEKQRKEIRKILGGS 369
BLAST of jgi.p|Trimin1|14578 vs. uniprot
Match: K0T887_THAOC (J domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T887_THAOC) HSP 1 Score: 318 bits (814), Expect = 2.240e-101 Identity = 173/345 (50.14%), Postives = 212/345 (61.45%), Query Frame = 3 Query: 60 ARDFYAILGLKKTASDSEIKKAYRQLSLKYHPDKNKSEDAATHFAEVASAYEVLSDPDKRSTYDNYGEEGLKQQEXXXXXXXXXXXXXXXXXXXX---GFPGQRARDEVPRTANVEVPLRVSLRQLYSGDAFEASFVRQVMCLRAAECEKRCPECMGPGVAMRTQKIAPGFVQQIQMRDDRCVARGKCWNKRCTACPNGPTEPESVPLTVEVQKGMQDGEHIVFEESADEAAGHKPGDLVLTIDTLPHAEFARHGDDLFMEMDIDLLDALVGFETGFAHLDGRRVPVKQTGVTAPGTTRVLSGEGMPRRNPRGQGSHGDLTIRFNVVFPKHLSPDQQRSIREVLG 1085 A +FY +LG+ K AS EIKKAYRQ SL+YHPDKNK E AA FAE+ AYEVL+D +K++ YD +GEEGLKQ E GF GQR + E T NV+VPLRV+L+QLY GD E S+VRQ +C EC K EC GPGV +R Q+IAPGFVQQ+Q RD+RCVA GK W C CPNG T+ E + LT+++ KGM GE + FE ADE G GDL I H F R GD L++ M+I L+DAL GF F HLDG + V VT ++G+GMPRRN RG GDL I F+V FP LS +Q+R IR++ G Sbjct: 28 AENFYKLLGISKNASPKEIKKAYRQKSLQYHPDKNKEEGAAEKFAEINYAYEVLTDEEKKNVYDRHGEEGLKQHEQRQGQGGGHGGFDDIFSHFGFGGGFGGQRRQRE-QSTPNVDVPLRVTLKQLYLGDEIEVSYVRQTLCTNWQECMKNNQECQGPGVKVRMQQIAPGFVQQVQQRDERCVAHGKMWRSNCRDCPNGKTQKEKIDLTIDLNKGMYPGEAVTFEGVADEKPGMTAGDLNFFIVEEKHDHFHRDGDHLYVTMEIPLVDALTGFSHEFTHLDGHKFTVPVNDVTECDHVMRVAGKGMPRRNGRG---FGDLYITFDVDFPDTLSEEQKRGIRKIFG 368
BLAST of jgi.p|Trimin1|14578 vs. uniprot
Match: A0A0G4GG88_VITBC (J domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GG88_VITBC) HSP 1 Score: 310 bits (793), Expect = 2.550e-98 Identity = 168/354 (47.46%), Postives = 219/354 (61.86%), Query Frame = 3 Query: 24 LLLLLGALAVAAARDFYAILGLKKTASDSEIKKAYRQLSLKYHPDKNKSEDAATHFAEVASAYEVLSDPDKRSTYDNYGEEGLKQQEXXXXXXXXXXXXXXXXXXXXGFPGQRARD---EVPRTANVEVPLRVSLRQLYSGDAFEASFVRQVMCLRAAECEKRCPECMGPGVAMRTQKIAPGFVQQIQMRDDRCVARGKCWNKRCTACPNGPTEPESVPLTVEVQKGMQDGEHIVFEESADEAAGHKPGDLVLTIDTLPHAEFARHGDDLFMEMDIDLLDALVGFETGFAHLDGRRVPVKQTGVTAPGTTRVLSGEGMPRRNPRGQGSHGDLTIRFNVVFPKHLSPDQQRSIRE 1076 L++LL A RDFY ILG+KK +S SEIKKAYR+LS+KYHPDKN ++A+ FAE+A AYE+LSD +KRS YDN+GEEGLKQQ GF G R E +T N+++ LRV+L QLY G+ F ++ RQV+C+ EC +C G G+ + TQ++ PGF+ Q QM+DD CV GK W K+C ACP G TE E V LT V+ GM G+ I FE AD G++PGDL + H F R G+DL ++I LLDALVGFET F HLDG+ P+K+ VT G T + G+GMP R + +GS GDL I F++ FP L+ Q+ +RE Sbjct: 20 LIVLLSATLSQCGRDFYKILGVKKESSASEIKKAYRKLSMKYHPDKNPEKEASKKFAEIAEAYEILSDDEKRSIYDNHGEEGLKQQHQESHMDPFDIFSAF------GFGGGRRXXXXXEKEKTPNLDMKLRVTLEQLYFGELFHVTYRRQVLCVNVDECTVDRRDCQGAGLRVVTQQMGPGFIVQNQMQDDSCVGPGKAWKKKCKACPKGQTEEEPVLLTAYVEAGMTSGDTITFEGVADHKVGYEPGDLNFVVTETQHDRFVRRGNDLLTTVEIPLLDALVGFETQFRHLDGKDFPLKKDDVTDHGETMTVKGKGMPVRGGK-EGSFGDLLITFHIKFPDKLTKKQKELVRE 366
BLAST of jgi.p|Trimin1|14578 vs. uniprot
Match: A0A1Z5KDI3_FISSO (DnaJ homolog subfamily B member 11 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KDI3_FISSO) HSP 1 Score: 301 bits (771), Expect = 8.460e-95 Identity = 182/358 (50.84%), Postives = 233/358 (65.08%), Query Frame = 3 Query: 27 LLLLGALAVAAARDFYAILGLKKTASDSEIKKAYRQLSLKYHPDKNKSEDAATHFAEVASAYEVLSDPDKRSTYDNYGEEGLKQQEXXXXXXXXXXXXXXXXXXXXGFPGQRARDEVPRTANVEVPLRVSLRQLYSGDAFEASFVRQVMCLRAAECEKRCPECMGPGVAMRTQKIAPGFVQQIQMRDDRCVARGKCWNKRCTACPNGPTEPESVPLTVEVQKGMQDGEHIVFEESADEAAGHKPGDLVLTIDTLPHAEFARHGDDLFMEMDIDLLDALVGFETGFAHLDGRRVPVKQTGVTAPGTTRVLSGEGMPRRNPRGQGSHGDLTIRFNVVFPKHLSPDQQRSIREVLGAATAA 1100 LLLL + V +A DFY +LG+ + A+ EIKKAYRQ SL+YHPDKNK E A+ FAE+ AYEVLSD +KR Y+ +GEEGLK+ E XXXXXXXXXXXXXXXXX ++ T +VE+PL ++L +LYSG E +VRQV+CL+ C K+ PEC GPGV + Q++APGFVQ +Q D++CVA+GK WN C ACP T+ ES+ LT+EV G++ GE I FE DE G+KPGDL I PHA++ R DDLF M+I L+DAL GF HLDG + V VT + G+GMPRRN RG GDL + F V FP LS Q+ +IR +LG +++ Sbjct: 26 LLLLTLVQVVSAADFYKLLGISRDATLKEIKKAYRQKSLEYHPDKNKEEGASERFAEINYAYEVLSDQEKRDIYNRHGEEGLKRHEQRGXXXXXXXXXXXXXXXXXXXXXXXXXNQEQTTPSVEIPLHLTLNELYSGKTLEVKYVRQVLCLQWEMCVKQAPECHGPGVRVIRQQLAPGFVQTVQQADEKCVAQGKMWNPNCKACPER-TQSESIDLTIEVAAGLRVGERITFEGVTDERPGYKPGDLHFVIFEEPHADYHRDRDDLFKTMEIPLVDALTGFSITLTHLDGEQFTVDVNEVTDCDHVLRVHGKGMPRRNGRG---FGDLYLTFEVDFPDELSAAQKEAIRAILGDGSSS 379
BLAST of jgi.p|Trimin1|14578 vs. uniprot
Match: B7FRV0_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FRV0_PHATC) HSP 1 Score: 300 bits (767), Expect = 3.360e-94 Identity = 170/350 (48.57%), Postives = 220/350 (62.86%), Query Frame = 3 Query: 54 AAARDFYAILGLKKTASDSEIKKAYRQLSLKYHPDKNKSEDAATHFAEVASAYEVLSDPDKRSTYDNYGEEGLKQQEXXXXXXXXXXXXXXXXXXXXGFPGQRA-RDEVPRTANVEVPLRVSLRQLYSGDAFEASFVRQVMCLRAAECEKRCPECMGPGVAMRTQKIAPGFVQQIQMRDDRCVARGKCWNKRCTACPNGPTEPESVPLTVEVQKGMQDGEHIVFEESADEAAGHKPGDLVLTIDTLPHAEFARHGDDLFMEMDIDLLDALVGFETGFAHLDGRRVPVKQTGVTAPGTTRVLSGEGMPRRNPRGQGSHGDLTIRFNVVFPKHLSPDQQRSIREVLGAATAA 1100 AA+RD+Y ILG+ + A+ EIKKAYRQ SL++HPDKNK E A+ FAEVA AYEVLSD + ++ YD +GE+GLKQ+E XXXXXXX F G R RD+ RT +VE+PL VSL+QLY G+ + +VRQV+CL+ C K P+C GPGV +R Q++APGFVQQ+Q RDDRCVARGK W +C CP TE E + +T+E+Q G + GE + FE DE G KPGDL + PH + R DDL+ M++ L+DAL GF HLD V VT + G+GMPRR+ RG GDL + F V FP L+ +Q+ +IR +L A Sbjct: 36 AASRDYYQILGVSRDATIKEIKKAYRQKSLEFHPDKNKDEGASEKFAEVARAYEVLSDDELKAVYDRHGEDGLKQREQRGXXXXXXXFEDLFSQFGFDFGGGRQQRDQEQRTPDVEIPLYVSLKQLYLGETIDVDYVRQVLCLQWEMCVKSAPDCQGPGVRVRRQQLAPGFVQQVQQRDDRCVARGKQWLDKCRECPRQ-TETERIQVTIEIQPGFRAGERVSFEGVTDEKPGFKPGDLHFVLMEEPHDVYHRDRDDLYKTMEVPLVDALTGFSVTLKHLDDHEYTVTVEDVTDCDHVLRVPGKGMPRRSGRG---FGDLYLTFEVDFPDTLTREQKDAIRSILAPGEEA 381 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|14578 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_14855 ID=mRNA_14855|Name=jgi.p|Trimin1|14578|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1482bp|location=Sequence derived from alignment at Contig_127:192837..197599- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. GCGCGATGGGCGTGCTTGCGTGCCTGTTGCTGCTGCTGGGCGCGCTTGCGback to top protein sequence of jgi.p|Trimin1|14578 >Trimin1|14578|CE14577_180 ID=Trimin1|14578|CE14577_180|Name=jgi.p|Trimin1|14578|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=368bp MGVLACLLLLLGALAVAAARDFYAILGLKKTASDSEIKKAYRQLSLKYHPback to top mRNA from alignment at Contig_127:192837..197599- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_14855 ID=mRNA_14855|Name=jgi.p|Trimin1|14578|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4763bp|location=Sequence derived from alignment at Contig_127:192837..197599- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_127:192837..197599- >mRNA_14855 ID=mRNA_14855|Name=jgi.p|Trimin1|14578|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1104bp|location=Sequence derived from alignment at Contig_127:192837..197599- (Tribonema minus UTEX_B_3156 )back to top |