mRNA_14822 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|154632 vs. uniprot
Match: A0A835ZE96_9STRA (HCNGP-like protein-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE96_9STRA) HSP 1 Score: 203 bits (516), Expect = 6.880e-66 Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 1 Query: 1 DDDAMAVDGGEGESGSYSGDSYSGAQDRVAKYLATMLKSNRDFTDSIKKKQEFGNPAVLTKICQHYGVDDRGSNYPRALFDAHGYDMADYYDNIAAEARKR 303 DDDAMAVDGGEGESGSYSGDSYSGAQDRVAKYLATMLKSNRDFTDSIKKKQEFGNPAVLTKICQHYGVDDRGSNYPRALFDAHGYDMADYYDNIAAEARKR Sbjct: 1 DDDAMAVDGGEGESGSYSGDSYSGAQDRVAKYLATMLKSNRDFTDSIKKKQEFGNPAVLTKICQHYGVDDRGSNYPRALFDAHGYDMADYYDNIAAEARKR 101
BLAST of jgi.p|Trimin1|154632 vs. uniprot
Match: A0A7S4DG27_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DG27_HETAK) HSP 1 Score: 74.3 bits (181), Expect = 7.310e-14 Identity = 30/60 (50.00%), Postives = 41/60 (68.33%), Query Frame = 1 Query: 76 QDRVAKYLATMLKSNRDFTDSIKKKQEFGNPAVLTKICQHYGVDDRGSNYPRALFDAHGY 255 Q RV +YL + D TD++KKK+EFGNP +L K+ +G+DD SNYP+ +FD HGY Sbjct: 171 QQRVTEYLTLAREKGYDLTDNLKKKKEFGNPQILQKVVDFFGIDDISSNYPKEIFDPHGY 230
BLAST of jgi.p|Trimin1|154632 vs. uniprot
Match: A0A7S3CB81_9CHLO (Hypothetical protein n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3CB81_9CHLO) HSP 1 Score: 69.7 bits (169), Expect = 2.900e-12 Identity = 32/75 (42.67%), Postives = 44/75 (58.67%), Query Frame = 1 Query: 76 QDRVAKYLATMLKSNRDFTDSIKKKQEFGNPAVLTKICQHYGVDDRGSNYPRALFDAHGYDMADYYDNIAAEARK 300 Q +VAK+L RD + I+ ++ FGNP L K+ +H+G+D GS YPRAL+D G D D YD I + K Sbjct: 82 QAKVAKFLDLKRLHGRDLVEDIRGRKSFGNPDFLQKMVEHFGIDQYGSCYPRALYDYQGCDPGDEYDKIEEQVAK 156
BLAST of jgi.p|Trimin1|154632 vs. uniprot
Match: A0A3P8WXT9_CYNSE (SAP30 binding protein n=2 Tax=Cynoglossus semilaevis TaxID=244447 RepID=A0A3P8WXT9_CYNSE) HSP 1 Score: 68.2 bits (165), Expect = 3.100e-11 Identity = 27/70 (38.57%), Postives = 45/70 (64.29%), Query Frame = 1 Query: 76 QDRVAKYLATMLKSNRDFTDSIKKKQEFGNPAVLTKICQHYGVDDRGSNYPRALFDAHGYDMADYYDNIA 285 QD++ K +L+ + D I+KK+EF NP++ K+ Q G+D+ G+NYP+ +FD HG+ YY+ +A Sbjct: 126 QDKIHKLYGDLLRGDLDINSHIQKKKEFRNPSIYEKLIQFSGIDEVGTNYPKDMFDPHGWSEDSYYEALA 195
BLAST of jgi.p|Trimin1|154632 vs. uniprot
Match: A0A0V0WX07_9BILA (SAP30-binding protein (Fragment) n=8 Tax=Trichinella TaxID=6333 RepID=A0A0V0WX07_9BILA) HSP 1 Score: 68.2 bits (165), Expect = 4.380e-11 Identity = 24/57 (42.11%), Postives = 41/57 (71.93%), Query Frame = 1 Query: 118 NRDFTDSIKKKQEFGNPAVLTKICQHYGVDDRGSNYPRALFDAHGYDMADYYDNIAA 288 N DF +++K+ +F NP++ K+ H+G+D++GSN+P FD HG++ D+YD I+A Sbjct: 256 NFDFNSTVQKRTDFRNPSIYEKLVDHFGLDEKGSNFPLEFFDPHGFNKKDFYDQISA 312
BLAST of jgi.p|Trimin1|154632 vs. uniprot
Match: A0A0V1DBE6_TRIBR (SAP30-binding protein (Fragment) n=3 Tax=Trichinella britovi TaxID=45882 RepID=A0A0V1DBE6_TRIBR) HSP 1 Score: 68.2 bits (165), Expect = 4.750e-11 Identity = 24/57 (42.11%), Postives = 41/57 (71.93%), Query Frame = 1 Query: 118 NRDFTDSIKKKQEFGNPAVLTKICQHYGVDDRGSNYPRALFDAHGYDMADYYDNIAA 288 N DF +++K+ +F NP++ K+ H+G+D++GSN+P FD HG++ D+YD I+A Sbjct: 275 NFDFNSTVQKRTDFRNPSIYEKLVDHFGLDEKGSNFPLEFFDPHGFNKKDFYDQISA 331
BLAST of jgi.p|Trimin1|154632 vs. uniprot
Match: A0A0V0VPW3_9BILA (SAP30-binding protein (Fragment) n=1 Tax=Trichinella sp. T9 TaxID=181606 RepID=A0A0V0VPW3_9BILA) HSP 1 Score: 68.2 bits (165), Expect = 4.960e-11 Identity = 24/57 (42.11%), Postives = 41/57 (71.93%), Query Frame = 1 Query: 118 NRDFTDSIKKKQEFGNPAVLTKICQHYGVDDRGSNYPRALFDAHGYDMADYYDNIAA 288 N DF +++K+ +F NP++ K+ H+G+D++GSN+P FD HG++ D+YD I+A Sbjct: 238 NFDFNSTVQKRTDFRNPSIYEKLVDHFGLDEKGSNFPLEFFDPHGFNKKDFYDQISA 294
BLAST of jgi.p|Trimin1|154632 vs. uniprot
Match: A0A7K7PXA7_ACRAR (S30BP protein (Fragment) n=1 Tax=Acrocephalus arundinaceus TaxID=39621 RepID=A0A7K7PXA7_ACRAR) HSP 1 Score: 66.6 bits (161), Expect = 7.520e-11 Identity = 28/70 (40.00%), Postives = 43/70 (61.43%), Query Frame = 1 Query: 76 QDRVAKYLATMLKSNRDFTDSIKKKQEFGNPAVLTKICQHYGVDDRGSNYPRALFDAHGYDMADYYDNIA 285 QD++AK +K D I+KK+EF NP++ K+ Q +D+ GSNYP+ +FD HG+ YY+ +A Sbjct: 132 QDKIAKLYERKIKERMDMNYIIQKKKEFRNPSIYEKLIQFCSIDEIGSNYPKDMFDPHGWSEDSYYEALA 201
BLAST of jgi.p|Trimin1|154632 vs. uniprot
Match: A0A5A9NWH6_9TELE (SAP30-binding protein n=1 Tax=Triplophysa tibetana TaxID=1572043 RepID=A0A5A9NWH6_9TELE) HSP 1 Score: 67.0 bits (162), Expect = 8.170e-11 Identity = 26/70 (37.14%), Postives = 47/70 (67.14%), Query Frame = 1 Query: 76 QDRVAKYLATMLKSNRDFTDSIKKKQEFGNPAVLTKICQHYGVDDRGSNYPRALFDAHGYDMADYYDNIA 285 Q++++K L + D + I+KK+EF NP++ K+ Q+ G+D+ G+NYP+ +FD HG+ YY+++A Sbjct: 130 QEKISKLYERKLHGDFDTNNHIQKKKEFRNPSIYEKLIQYCGIDELGTNYPKDMFDPHGWSEDSYYESLA 199
BLAST of jgi.p|Trimin1|154632 vs. uniprot
Match: A0A2G8LQ41_STIJA (Putative SAP30-binding protein isoform X1 n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8LQ41_STIJA) HSP 1 Score: 66.6 bits (161), Expect = 1.250e-10 Identity = 26/70 (37.14%), Postives = 48/70 (68.57%), Query Frame = 1 Query: 76 QDRVAKYLATMLKSNRDFTDSIKKKQEFGNPAVLTKICQHYGVDDRGSNYPRALFDAHGYDMADYYDNIA 285 QD++AKY + N D SI+ +++F NP++ K+ + G+D+ G+NYP+ +F+ HG+D + YY+++A Sbjct: 145 QDKIAKYY----RKNLDMNASIQSRKDFRNPSIYEKLISYLGIDELGTNYPKDVFNPHGWDESSYYESLA 210 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|154632 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_14822 ID=mRNA_14822|Name=jgi.p|Trimin1|154632|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=336bp|location=Sequence derived from alignment at Contig_156:257755..258090+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. GACGACGACGCGATGGCGGTGGATGGCGGCGAAGGCGAAAGCGGCAGTTAback to top protein sequence of jgi.p|Trimin1|154632 >Trimin1|154632|gw1.156.59.1 ID=Trimin1|154632|gw1.156.59.1|Name=jgi.p|Trimin1|154632|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=112bp DDDAMAVDGGEGESGSYSGDSYSGAQDRVAKYLATMLKSNRDFTDSIKKKback to top mRNA from alignment at Contig_156:257755..258090+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_14822 ID=mRNA_14822|Name=jgi.p|Trimin1|154632|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=336bp|location=Sequence derived from alignment at Contig_156:257755..258090+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_156:257755..258090+ >mRNA_14822 ID=mRNA_14822|Name=jgi.p|Trimin1|154632|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=336bp|location=Sequence derived from alignment at Contig_156:257755..258090+ (Tribonema minus UTEX_B_3156 )back to top |