mRNA_14816 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|177668 vs. uniprot
Match: A0A835Z971_9STRA (ADC synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z971_9STRA) HSP 1 Score: 865 bits (2236), Expect = 5.050e-315 Identity = 502/502 (100.00%), Postives = 502/502 (100.00%), Query Frame = 1 Query: 1 MSENDITAAHVRAALAACALRDVSVSAPHLARQPHVQHIRRSITARAPXXXXXXXXXXXXXXXXXXXXXXXXXXAALIPALLRALHPTPAVCGCPTAAAHDVIRACEPFDRGFYAGPVGYLSARASDVGVAIRSALLGGSVSSSGSSGGGGTRLTLFAGAGIVAGSTAEGEWGETGPSMKMKGMLSLFARAPAPAASAAALRRLPNVNALAGALAAEELARCGVRACVLCPGSRSTPLTHAAAPRAPSAAXXXXAMPLVHHDERGAAFFALGYAKGSGGRPCAVVTTSGTAVANLLPGAMEAGLGGHAMLLLTADRPPEARDVGADQTLDQVCLYVHLLRNCARWFRDVAPPDDAVSACALLSDVSHAVSRASGSSXXXXXXXXXDAGPVHLNLMFRENLAPEGGAIRDAQCSGLASDWSPRCLDTPQFARWLAGDAPLAVTLAVTPGGNGGGVGDVVELLLGARRGVVVVGALYSARERAAARRLALLLRVCMYDSICPCS 1506 MSENDITAAHVRAALAACALRDVSVSAPHLARQPHVQHIRRSITARAPXXXXXXXXXXXXXXXXXXXXXXXXXXAALIPALLRALHPTPAVCGCPTAAAHDVIRACEPFDRGFYAGPVGYLSARASDVGVAIRSALLGGSVSSSGSSGGGGTRLTLFAGAGIVAGSTAEGEWGETGPSMKMKGMLSLFARAPAPAASAAALRRLPNVNALAGALAAEELARCGVRACVLCPGSRSTPLTHAAAPRAPSAAXXXXAMPLVHHDERGAAFFALGYAKGSGGRPCAVVTTSGTAVANLLPGAMEAGLGGHAMLLLTADRPPEARDVGADQTLDQVCLYVHLLRNCARWFRDVAPPDDAVSACALLSDVSHAVSRASGSSXXXXXXXXXDAGPVHLNLMFRENLAPEGGAIRDAQCSGLASDWSPRCLDTPQFARWLAGDAPLAVTLAVTPGGNGGGVGDVVELLLGARRGVVVVGALYSARERAAARRLALLLRVCMYDSICPCS Sbjct: 1 MSENDITAAHVRAALAACALRDVSVSAPHLARQPHVQHIRRSITARAPXXXXXXXXXXXXXXXXXXXXXXXXXXAALIPALLRALHPTPAVCGCPTAAAHDVIRACEPFDRGFYAGPVGYLSARASDVGVAIRSALLGGSVSSSGSSGGGGTRLTLFAGAGIVAGSTAEGEWGETGPSMKMKGMLSLFARAPAPAASAAALRRLPNVNALAGALAAEELARCGVRACVLCPGSRSTPLTHAAAPRAPSAAXXXXAMPLVHHDERGAAFFALGYAKGSGGRPCAVVTTSGTAVANLLPGAMEAGLGGHAMLLLTADRPPEARDVGADQTLDQVCLYVHLLRNCARWFRDVAPPDDAVSACALLSDVSHAVSRASGSSXXXXXXXXXDAGPVHLNLMFRENLAPEGGAIRDAQCSGLASDWSPRCLDTPQFARWLAGDAPLAVTLAVTPGGNGGGVGDVVELLLGARRGVVVVGALYSARERAAARRLALLLRVCMYDSICPCS 502
BLAST of jgi.p|Trimin1|177668 vs. uniprot
Match: D8LMF2_ECTSI (Similar to Isochorismate Synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMF2_ECTSI) HSP 1 Score: 363 bits (933), Expect = 4.880e-108 Identity = 264/548 (48.18%), Postives = 307/548 (56.02%), Query Frame = 1 Query: 7 ENDITAAHVRAALAACALRDVSVSAPHLARQPHVQHIRRSITARAPXXXXXXXXXXXXXXXXXXXXXXXXXXAALIPALLRALHPTPAVCGCPTAAAHDVIRACEPFDRGFYAGPVGYLSARASDVGVAIRSALLGGSVSSS----------GSSGG-------GGTRLTLFAGAGIVAGSTAEGEWGETGPSMKMKGMLSLFARAPAPAASAAALRRLPNVNALAGALAAEELARCGVRACVLCPGSRSTPLTHAAAPRAPSAAXXXXAMPLVHHDERGAAFFALGYAKGSGGRP---------------------------CAVVTTSGTAVANLLPGAMEAGLGGHAMLLLTADRPPEARDVGADQTLDQV-CLYVHLLRNCARWFRDVAPPDDAVSACALLSDVSHAVSRASGSSXXXXXXXXXDAGPVHLNLMFRENLAPEGGAIRDAQCSGLASDWSPRCLDTPQFARWLAGDAPLAVTLAVTPGGNGGGVG-------DVVELLLGARRGVVVVGALYSARERAAARRLALLLRVCMYDSI 1494 EN ITA +V AAL ++ S P L R HVQHI R ITA +LLR +HPTPAVCG P + VI E FDRGFYAGPVGY+SA AS+ GVAIRSAL+ S SS GS+GG GG+ +TLFAGAGIV GS A EW ETG +KMK LSLF PA LR +PNVN+L GAL EEL R GVR +CPGSRS PL A A R PSA + + HHDERGA F+A+G+A+ GR CAVVT+SGTAVANLLP A EA G +MLLLTADRPPE R G++QT+DQ C V+LL + AR DV P D VSA LLSD+ HAVSRA G XXX GPVHLN MFRENLAP GA+RDA GL+S WS RCLD+P+ ARW AG P T G GGG+G VV+ LL ARRG+++VG+L ERA R LA+ LR +Y + Sbjct: 661 ENAITADYVSAALRKAGAVKLNCSEPSLKRLTHVQHICRRITATLAPGTDNDCSEGGFCRDDAEGGGQGRGAGGAGRSLLREMHPTPAVCGTPRDVTYSVIGEVEGFDRGFYAGPVGYISAGASEFGVAIRSALVTDSWSSPEGFSRRGGVLGSAGGPAARGVGGGSEMTLFAGAGIVPGSVALLEWAETG--VKMKNFLSLF-----PARPVRGLREMPNVNSLWGALVVEELVRLGVRHFCVCPGSRSAPLAVAIA-RHPSA------VSISHHDERGAGFYAVGFARAGPGRGXXXXXXXXXXXXXXXXXXXVGSGALGMCAVVTSSGTAVANLLPAAAEADAAGLSMLLLTADRPPELRGCGSNQTIDQARCCMVNLLGSRARLSLDVQCPTDEVSAACLLSDIDHAVSRALGGGXXXGVP-----GPVHLNFMFRENLAPVEGAVRDAGVPGLSSAWSDRCLDSPRMARWEAGIEPFTTTA-----GGGGGLGRRGEGLQQVVDRLLCARRGILIVGSLIGPEERADVRHLAVTLRWPVYADV 1184
BLAST of jgi.p|Trimin1|177668 vs. uniprot
Match: A0A6H5JV35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV35_9PHAE) HSP 1 Score: 324 bits (831), Expect = 3.620e-95 Identity = 215/409 (52.57%), Postives = 249/409 (60.88%), Query Frame = 1 Query: 238 ALLRALHPTPAVCGCPTAAAHDVIRACEPFDRGFYAGPVGYLSARASDVGVAIRSALL--------------GGSVSSSGSSG---GGGTRLTLFAGAGIVAGSTAEGEWGETGPSMKMKGMLSLFARAPAPAASAAALRRLPNVNALAGALAAEELARCGVRACVLCPGSRSTPLTHAAAPRAPSAAXXXXAMPLVHHDERGAAFFALGYAK---GSGGRP------------------------CAVVTTSGTAVANLLPGAMEAGLGGHAMLLLTADRPPEARDVGADQTLDQV--CLYVHLLRNCARWFRDVAPPDDAVSACALLSDVSHAVSRASGSSXXXXXXXXXDAGPVHLNLMFRENLAPEGGAIRDAQCSGLASDWSPRCLDTPQFARWLAGDAPLAVT 1326 +LLR +HPTPAVCG P + VI E FDRGFYAGPVGY+SA AS+ GVAIRSAL+ GG S+ G +G GGG+ +TLFAGAGIV GS A EW ETG +KMK LSLF PA A LR +PNVN+L GAL EEL R GVR +CPGSRS PL A A R PSA + + HHDERGA F+A+G+A+ G GGR CAVVT+SGTAVANLLP A EA G +MLLLTADRPPE R G++QT+DQ C+ V+LL + AR DV P D VSA LLSD+ HAVSRA G GPVHLN MFRENLAP GA+RDA GL+S WS RCL++P+ ARW AG P T Sbjct: 505 SLLREMHPTPAVCGTPRDVTYSVIGEVEGFDRGFYAGPVGYISAGASEFGVAIRSALVTDSWSSPEGFSRRGGGLCSAGGPAGRGAGGGSEMTLFAGAGIVPGSVALSEWAETG--VKMKNFLSLF-----PARPARGLREMPNVNSLWGALVVEELVRLGVRHFCVCPGSRSAPLAVAIA-RHPSA------VSISHHDERGAGFYAVGFARAGPGRGGRAHSXXXXXXXXXXXXXXXXXGALGICAVVTSSGTAVANLLPAAAEADAAGLSMLLLTADRPPELRGCGSNQTIDQARCCMCVNLLGSRARLSMDVQCPTDEVSAACLLSDIDHAVSRALGGGGVP--------GPVHLNFMFRENLAPVEGAVRDAGVPGLSSAWSDRCLESPRMARWEAGIEPFTTT 891
BLAST of jgi.p|Trimin1|177668 vs. uniprot
Match: A0A4D9D2W1_9STRA (MR_MLE domain-containing protein n=6 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D2W1_9STRA) HSP 1 Score: 293 bits (751), Expect = 8.050e-84 Identity = 200/416 (48.08%), Postives = 242/416 (58.17%), Query Frame = 1 Query: 244 LRALHPTPAVCGCPTAAAHDVIRACEPFDRGFYAGPVGYLSARASDVGVAIRSALLGGSVSSSGSSGGGGTRLTLFAGAGIVAGSTAEGEWGETGPSMKMKGMLSLFARAPAPAASAAALRRLPNVNALAGALAAEELARCGVRACVLCPGSRSTPLTHAAAPRAPSAAXXXXAMPLVHHDERGAAFFALGYAKGSGGRPCAVVTTSGTAVANLLPGAMEAGLGGHAMLLLTADRPPEARDVGADQTLDQVCLYVHLLRNCARWFRDVAPPDDAVSACALLSDVSHAVSRASGSSXXXXXXXXXDAGPVHLNLMFRENLAPEGGAIRDAQCSGLASDWSPRCLDTPQFARWLAGDAP------LAVTLAVTPGGNGGGVGDVVELLLGARRGVVVVGALYSARERAAARRLALLLR 1473 L ALHPTPAV G P A IR EPFDRGFYAGP+G+LS +++ VAIRS L+ R +FAGAGIV GSTAEGEW E G KM + +F R P LR LPN+ L L EELAR GV V+ PGSRSTPL AAA R P +VHHDERGA F+ LGYA+ G RP AV+ TSGTAVANLLP A+EA +LLLTADRPPE RD GA+QT+ Q +++H ARW +DV P V A +LLSDV +AVS A G+ D GPVHLN M RENLAPEGGA+RD GL S+W CL +FA+W P L + +++P D++ + A+RG++V+G L R+RA R LA LR Sbjct: 435 LAALHPTPAVAGEPRLTALQAIRQLEPFDRGFYAGPIGFLSRESAEFAVAIRSVLIVRE------------RAHVFAGAGIVPGSTAEGEWAEIGA--KMANFVRMFPRPSPP------LRSLPNLATLWATLVVEELARNGVTHFVIAPGSRSTPLVTAAA-RHPDTTL------MVHHDERGAGFYCLGYARARG-RPAAVIVTSGTAVANLLPAAVEAATDRVPLLLLTADRPPEQRDCGANQTVAQPDMFLHF----ARWTKDVPCPTPEVLASSLLSDVDYAVSMARGA----------DPGPVHLNFMLRENLAPEGGAVRDTAVPGLHSEWPDACLGGRRFAQWERSLQPYTCFPRLRPSCSLSP--------DLLAAIHDAQRGLLVIGRLPQRRDRAHVRWLAQGLR 800
BLAST of jgi.p|Trimin1|177668 vs. uniprot
Match: A0A7R9WF10_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WF10_9STRA) HSP 1 Score: 250 bits (639), Expect = 5.210e-73 Identity = 184/404 (45.54%), Postives = 227/404 (56.19%), Query Frame = 1 Query: 241 LLRALHPTPAVCGCPTAAAHDVIRACEP--FDRGFYAGPVGYLSARASDVGVAIRSALLGGSVSSSGSSGG-----GGTRLTLFAGAGIVAGSTAEGEWGETGPSMKMKGMLSLFARAPAPAASAAALRRLPNVNALAGALAAEELARCGVRACVLCPGSRSTPLTHAAAPRAPSAAXXXXAMPLVHHDERGAAFFALGYAKGSGGRPCAVVTTSGTAVANLLPGAMEAGLGGHAMLLLTADRPPEARDVGADQTLDQVCLYVHLLRNCARWFRDVAPPDDAVSACALLSDVSHAVSRASGSSXXXXXXXXXDAGPVHLNLMFRENLAPEGGAIR-DAQCSGLASDWSPRCLDTPQFARWLAGDAPLAVTLAVTPGGNGG----GVGDVVELLLGARRGVVVVG 1416 LL LHPTPAV G P A IR E FDRG+YAGP GY+S +DV V+IRSALL + ++ G TR+ ++AGAGIV GSTAEGEW ET S K+ + SLF +P L+ PN N+ EEL R GV +CPGSRSTPLT A A RA + HDERGA F ALGY + S G+P V+T+SGTAVANL P +EAGL G +LLLTADRP E RD GA+Q +DQV + + RWFRD+ PP D V A LSD +HAV+ + GPVH+N+ FRENLAP+ G IR D + L S R D P F RW + + + GN GV DV L+L ++RG++VVG Sbjct: 15 LLCRLHPTPAVGGLPRPNAVQFIRRNEGPYFDRGYYAGPFGYISPDDTDVAVSIRSALLSSKSNKIRATYGTNTCDDNTRVLVYAGAGIVPGSTAEGEWMET--SHKLGVISSLFPASPV------TLQNAPNANSAWATAFIEELIRNGVVRFYICPGSRSTPLTVAIA-RATRTHLGEAVEAISVHDERGAGFRALGYGR-STGKPAVVITSSGTAVANLYPAVVEAGLDGVPLLLLTADRPYENRDTGANQAIDQVKAFSS---SYIRWFRDILPPSDDVPVSACLSDANHAVAVSRDLM-----------GPVHINVQFRENLAPDAGPIRNDNRVDSLTRFHSSRFTDVPGFLRWSLSGGSWSQSYYPSESGNSNTNNNGVIDVANLILQSKRGIIVVG 394
BLAST of jgi.p|Trimin1|177668 vs. uniprot
Match: A0A7S0H9L0_9CRYP (Isochorismate synthase (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0H9L0_9CRYP) HSP 1 Score: 260 bits (665), Expect = 1.380e-72 Identity = 196/480 (40.83%), Postives = 256/480 (53.33%), Query Frame = 1 Query: 7 ENDITAAHVRAALAACALRDVSVSAPHLARQPHVQHIRRSITARAPXXXXXXXXXXXXXXXXXXXXXXXXXXAALIPALLRALHPTPAVCGCPTAAAHDVIRACEPFDRGFYAGPVGYLSARASDVGVAIRSALLGGSVSSSGSSGGGGTRLTLFAGAGIVAGSTAEGEWGETGPSMKMKGMLSLFARAPAPAASAAALRRLPNVNALAGALAAEELARCGVRACVLCPGSRSTPLTHAAAPRAPSAAXXXXAMPLVHHDERGAAFFALGYAKGSGGRPCAVVTTSGTAVANLLPGAMEAGLGGHAMLLLTADRPPEARDVGADQTLDQVCLYVHLLRNCARWFRDVAPPDDAVSACALLSDVSHAVSRASGSSXXXXXXXXXDAGPVHLNLMFRENLAPEGGAIRDAQCSG-LASDWSPRCLDTPQFARWLAGDAPLAVTLAVTPGGNGGGVGDVVELLLGARRGVVVVGALYSARERA 1443 EN +T +++ LA A DV S ++ + HVQHI R I A+ AA LL L+PTPAVCG A IR+ E FDRGF+ GPVG++S+ + VAIRS L + L ++AGAGIV GS + EW ET + KM+ +L LFA P P +S LPN+N L L EEL RCGV LCPGSRSTPL A + + A +V HDER A F+ +GYA+ S +P A + TSGTAVANLLP A+EA G MLLLTADRP E RD G++QT++Q ++ +R W RD+ P D + A LLSDV +AV RAS S GPVHLN FRENLAP+GG +RD ++S WS C+ T A+W + L T+ + + +V+ + +RRG+VVVG L+SA + A Sbjct: 414 ENGVTTRYIQEQLANVA-EDVETSDIYVMKLRHVQHICRKIRAKP------------------------SSKAATPIELLLTLNPTPAVCGESRPVATRFIRSVEGFDRGFFGGPVGFVSSSVCEFLVAIRSVLCKPKM------------LHVYAGAGIVPGSDPKSEWEET--AFKMRNILQLFANPPRPLSS------LPNINMLWAVLTVEELCRCGVTVFCLCPGSRSTPL-------AVAVSWNPKATAVVMHDERSAGFYCVGYARASK-KPAACLVTSGTAVANLLPAAVEASQQGLPMLLLTADRPFELRDNGSNQTIEQAGIFGRYVR----WSRDICCPSDQIPANVLLSDVDYAVHRASSSPR----------GPVHLNFQFRENLAPDGGPVRDNPPGNPISSTWSKGCISTLSIAKWE--HSALPHTVFPSSSSHLEVPAEVLCAMARSRRGLVVVGNLFSAEDSA 824
BLAST of jgi.p|Trimin1|177668 vs. uniprot
Match: A0A7S1FDF8_NOCSC (Hypothetical protein (Fragment) n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1FDF8_NOCSC) HSP 1 Score: 259 bits (663), Expect = 1.820e-72 Identity = 187/417 (44.84%), Postives = 237/417 (56.83%), Query Frame = 1 Query: 247 RALHPTPAVCGCPTAAAHDVIRACEPFDRGFYAGPVGYLSARASDVGVAIRSALLGGSVSSSGSSGGGGTRLTLFAGAGIVAGSTAEGEWGETGPSMKMKGMLSLFARAPAPAASAAALRRLPNVNALAGALAAEELARCGVRACVLCPGSRSTPLTHAAAPRAPSAAXXXXAMPLVHHDERGAAFFALGYAKGSGGRPCAVVTTSGTAVANLLPGAMEAGLGGHAMLLLTADRPPEARDVGADQTLDQVCLYVHLLRNCARWFRDVAPPDDAVSACALLSDVSHAVSRASGSSXXXXXXXXXDAGPVHLNLMFRENLAPEGGAIRDAQCSGLASDWSPRCLDTPQFARWLAGDAPLAVTLAVTPGGNGGGVGD-VVELLLGARRGVVVVGALYSARERAAARRLALLLRVCMYDSI 1494 R + PTPAVCG P A++ IR EPFDRGFYAGP G +SA+ S++ VA+RSAL+ RL ++AGAGIV GS E E+ E S+KM+ F P P AA+L PN+N L L EEL R GV V+C GSRSTPL A A R+P+A +++HDERGAAF+ALG+AK GG P V+ TSG+AVANLLPG +EA ++LLTADRPPE RD GA+QT+ Q ++ +R W +D PP A ALLSDV AV A+GS + GPVHLN FRENLAP+ G +R A S W T + RW + P +V + P G+ D + EL+ R VVVVGAL +ARE A +A LR ++ I Sbjct: 447 RRMSPTPAVCGLPLASSQKHIRTTEPFDRGFYAGPCGVVSAQGSELTVALRSALVQDR-----------RRLHVYAGAGIVQGSVPEEEYAEI--SLKMRQFTEGFPAEP-PGGLAASLSAAPNLNTLWATLVVEELVRSGVLHFVICAGSRSTPLVVAVA-RSPAATF------VMNHDERGAAFYALGWAKAVGG-PVGVIVTSGSAVANLLPGCLEAAAAQVPLVLLTADRPPELRDTGANQTITQPNIFGRFVR----WEKDFPPPSTEYPAHALLSDVDLAVGHATGS-------LSQNPGPVHLNFCFRENLAPDAGPVRGAPERN--SSWDKHYASTHELVRWASEGKPKSVYVPSLPLMCPHGIVDELTELVSSESRIVVVVGALSNAREALLAENIAARLRGVVFACI 828
BLAST of jgi.p|Trimin1|177668 vs. uniprot
Match: A0A7S4NHH4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NHH4_9STRA) HSP 1 Score: 238 bits (607), Expect = 1.160e-68 Identity = 163/335 (48.66%), Postives = 200/335 (59.70%), Query Frame = 1 Query: 241 LLRALHPTPAVCGCPTAAAHDVIRACEP--FDRGFYAGPVGYLSARASDVGVAIRSALLGGSVSSS----GSSGGGGTRLTLFAGAGIVAGSTAEGEWGETGPSMKMKGMLSLFARAPAPAASAAALRRLPNVNALAGALAAEELARCGVRACVLCPGSRSTPLTHAAAPRAPSAAXXXXAMPLVHHDERGAAFFALGYAKGSGGRPCAVVTTSGTAVANLLPGAMEAGLGGHAMLLLTADRPPEARDVGADQTLDQVCLYVHLLRNCARWFRDVAPPDDAVSACALLSDVSHAVSRASGSSXXXXXXXXXDAGPVHLNLMFRENLAPEGGAIRD 1227 LLR LHPTPAV G P++ A + IR E FDRGFYAGP GY+ +DV VAIRSALL S+ G TR++++AGAGIV GST E EW ETG K+ + SLF +P L+ P N EEL RCGV +CPGSRSTPLT A A + A+ + HDERGAAF ALGY + +G RP AV+T+SGTAVANL P +EAG+ G M++LTADRP E+RD GA+Q +DQV + RWFRD+ PP D V A+LSD +HAV+ GPVHLN+ FRENLAP+ G IR+ Sbjct: 209 LLRNLHPTPAVNGYPSSEAVEFIRQYESTLFDRGFYAGPFGYIGRDDADVAVAIRSALLITGTKEDRDDIASNMLGATRVSIYAGAGIVPGSTVESEWAETGA--KLGVLSSLFPSSPI------TLQNSPTANVAWATAFIEELIRCGVTQFYVCPGSRSTPLTAALARATRARVGTVHALSV--HDERGAAFRALGYGRRTG-RPAAVITSSGTAVANLYPAVVEAGMDGVPMMILTADRPYESRDTGANQAIDQVKAFSSTY---TRWFRDILPPSDDVPISAILSDTNHAVT-----------VLRQLMGPVHLNVQFRENLAPDSGPIRN 518
BLAST of jgi.p|Trimin1|177668 vs. uniprot
Match: A0A0G4GZP4_VITBC (MR_MLE domain-containing protein n=5 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GZP4_VITBC) HSP 1 Score: 247 bits (631), Expect = 6.580e-68 Identity = 176/402 (43.78%), Postives = 229/402 (56.97%), Query Frame = 1 Query: 241 LLRALHPTPAVCGCPTAAAHDVIRACEPFDRGFYAGPVGYLSARASDVGVAIRSALLGGSVSSSGSSGGGGTRLTLFAGAGIVAGSTAEGEWGETGPSMKMKGMLSLFARAPAPAASAAALRRLPNVNALAGALAAEELARCGVRACVLCPGSRSTPLTHAAAPRAPSAAXXXXAMPLVHHDERGAAFFALGYAKGSGGRPCAVVTTSGTAVANLLPGAMEAGLGGHAMLLLTADRPPEARDVGADQTLDQVCLYVHLLRNCARWFRDVAPPDDAVSACALLSDVSHAVSRASGSSXXXXXXXXXDAGPVHLNLMFRENLAPEGGAIRDAQCSGLASDWSPRCLD-----TPQFARWLAGDAPLAVTLAVTPGGNGGGVG-----DVVELLLGARRGVVVVG 1416 L+ LHPT AVCG P A D +R E FDRGFYAGPVGY++A S+ VAIRSAL+ S S + + +FAGAGIV GSTA GEW ET ++KM+ + + P A LR PN+N + G EE R G+ + PGSRS+P+ A A R P AA ++ HDERGAAF +GYA+ +G R +V +SGTAVANL PG +EA G M+L TADRPPE R G+ QT+ Q ++ +R W +DV+ P D ++ LL+DV AV+ A G+ GPV LNL FRENLAP+GG +R GLAS WS CLD + A+W +P A+ + G GGG+ +V+ LL +RRG+VV G Sbjct: 553 LMHGLHPTAAVCGLPKGIAADAVRRLEDFDRGFYAGPVGYVAATGSEFAVAIRSALIRPDDSGRRPS----SVVHVFAGAGIVPGSTASGEWRET--AVKMRNFVEVLGPPAHPLALR--LRSAPNINTMGGVAIVEEFLRLGISRFFVAPGSRSSPIVTALA-RHPLAARVTTSV----HDERGAAFMGVGYARATG-RAAVIVVSSGTAVANLYPGVVEAWQAGLPMVLCTADRPPELRGRGSMQTIWQPDIFGKYVR----WMKDVSCPTDHIALSHLLADVDCAVAHAEGAKGGGK-------GPVQLNLPFRENLAPDGGPVRGTP--GLASTWSHGCLDGFGHGDERLAKWQQSCSPYAIYVP----GEGGGMSRDAASEVLSLLSSSRRGLVVAG 923
BLAST of jgi.p|Trimin1|177668 vs. uniprot
Match: A0A7S3Q7H0_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q7H0_9STRA) HSP 1 Score: 247 bits (631), Expect = 6.860e-68 Identity = 176/400 (44.00%), Postives = 228/400 (57.00%), Query Frame = 1 Query: 241 LLRALHPTPAVCGCPTAAAHDVIRACEP--FDRGFYAGPVGYLSARASDVGVAIRSALLGGSVSSSGSSGGGG-TRLTLFAGAGIVAGSTAEGEWGETGPSMKMKGMLSLFARAPAPAASAAALRRLPNVNALAGALAAEELARCGVRACVLCPGSRSTPLTHAAAPRAPSAAXXXXAMPLVHHDERGAAFFALGYAKGSGGRPCAVVTTSGTAVANLLPGAMEAGLGGHAMLLLTADRPPEARDVGADQTLDQVCLYVHLLRNCARWFRDVAPPDDAVSACALLSDVSHAVSRASGSSXXXXXXXXXDAGPVHLNLMFRENLAPEGGAIRDAQCSGLASDWSP-RCLDTPQFARWLAGDAPLAVTLAVTPGGNGGGVGDVVELLLGARRGVVVVGALYS 1428 LL LHPTPAVCG P + + IR E FDRG YAGP+G++ + +D+ VAIRSALL VSS +RL+++AGAGIV GST +GEW ETG K+ + S F+++P L+ N EEL R GV +CPGSRSTP+T A A S HDERGAAF ALGYA+ + RP AVVT+SGTAVANL P MEAGL G +LL+TADRP E RD GA+Q +DQ+ ++ + RWFRD++PP D + LSD +HAVS A GPVHLN+ FRENLAP+ G IR +G +D+SP R +D F RW + + + + D+ L+ +R+G++VVG L S Sbjct: 613 LLEKLHPTPAVCGVPFKESIEFIRDYESVSFDRGMYAGPLGFIGSDRTDIVVAIRSALLTNGVSSKNILRNNVVSRLSVYAGAGIVPGSTVQGEWSETG--YKLGVLSSTFSQSPL------TLKSFQTPNEAWATSFVEELIRSGVTQFYICPGSRSTPMTAALARAMRSNIGLIDCTST--HDERGAAFRALGYARATK-RPAAVVTSSGTAVANLYPAVMEAGLDGVPLLLITADRPYENRDTGANQAVDQIKVFSE---SYVRWFRDISPPSDDIPVSLALSDANHAVSVARELR-----------GPVHLNVQFRENLAPDAGPIRGDNRNGSHADFSPSRFIDVAGFQRWSTHGNKWSKLYSPSGSNVENAMYDIASLIARSRKGIIVVGNLRS 987 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|177668 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_14816 ID=mRNA_14816|Name=jgi.p|Trimin1|177668|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1509bp|location=Sequence derived from alignment at Contig_156:222258..224636+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGAGCGAGAACGACATCACGGCGGCGCACGTGCGCGCCGCGCTGGCCGCback to top protein sequence of jgi.p|Trimin1|177668 >Trimin1|177668|e_gw1.156.19.1 ID=Trimin1|177668|e_gw1.156.19.1|Name=jgi.p|Trimin1|177668|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=503bp MSENDITAAHVRAALAACALRDVSVSAPHLARQPHVQHIRRSITARAPPPback to top mRNA from alignment at Contig_156:222258..224636+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_14816 ID=mRNA_14816|Name=jgi.p|Trimin1|177668|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2379bp|location=Sequence derived from alignment at Contig_156:222258..224636+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_156:222258..224636+ >mRNA_14816 ID=mRNA_14816|Name=jgi.p|Trimin1|177668|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1509bp|location=Sequence derived from alignment at Contig_156:222258..224636+ (Tribonema minus UTEX_B_3156 )back to top |