mRNA_14806 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|353313
Unique NamemRNA_14806
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|353313 vs. uniprot
Match: A0A835ZE86_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE86_9STRA)

HSP 1 Score: 1122 bits (2901), Expect = 0.000e+0
Identity = 632/632 (100.00%), Postives = 632/632 (100.00%), Query Frame = 1
Query:    1 MAAMLEQTSGSFDNTAGGDGSGKDCSVTAPARSVLPAAGDTTDCYPLAAPPTTAEPSLEXXXXXXXXXXXXXXXXASKEHEVAHTSNTPQAVSTGALLHSNHKGGPDVKRHCPPQCICQGGKTLYNSNTQGYTKIVWEDLKNLFYMTEGAMCRIYSAEYRGAKVVVKLPRDDCEDPEIAEHDLEVELEVLWGLDHRHIIKLLGAGLREIPPYRFLVLEYLEMGTLADRLNAGAPPGQEETGYNKIIKGTKKYQRFHQVTMLERAMELAEALEYLHHSVCGGAAFVVHRDLKPDNIGFKADGTLKLFDFGLARCVKRRARVNARYDMTGETGSMRYMAPEVVESLPYNEKVDVYAFGLLLWEMLQYRRVFEGMSVGDFYQRVVNGGIRPPLDSSWPPALRKLIDLCWHADVDKRPDFHYIAAQLKDIYRXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQRXXXXXXXXXXXXXXCQEKAGGDKIAMSAISLMAEGRGRLISSPQHIARSATSTVIIHKHSTPQRNSSKAVAGGGKARLGAATGGVGGXXXXKGKGGGFMRRLGRRLLGRRSAGGTGGGIASLKDVPLERGAGLHGKGAEPLEDMDQLTSVVESLGEDQEFDSHTHLPGLAATK 1896
            MAAMLEQTSGSFDNTAGGDGSGKDCSVTAPARSVLPAAGDTTDCYPLAAPPTTAEPSLEXXXXXXXXXXXXXXXXASKEHEVAHTSNTPQAVSTGALLHSNHKGGPDVKRHCPPQCICQGGKTLYNSNTQGYTKIVWEDLKNLFYMTEGAMCRIYSAEYRGAKVVVKLPRDDCEDPEIAEHDLEVELEVLWGLDHRHIIKLLGAGLREIPPYRFLVLEYLEMGTLADRLNAGAPPGQEETGYNKIIKGTKKYQRFHQVTMLERAMELAEALEYLHHSVCGGAAFVVHRDLKPDNIGFKADGTLKLFDFGLARCVKRRARVNARYDMTGETGSMRYMAPEVVESLPYNEKVDVYAFGLLLWEMLQYRRVFEGMSVGDFYQRVVNGGIRPPLDSSWPPALRKLIDLCWHADVDKRPDFHYIAAQLKDIYRXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQRXXXXXXXXXXXXXXCQEKAGGDKIAMSAISLMAEGRGRLISSPQHIARSATSTVIIHKHSTPQRNSSKAVAGGGKARLGAATGGVGGXXXXKGKGGGFMRRLGRRLLGRRSAGGTGGGIASLKDVPLERGAGLHGKGAEPLEDMDQLTSVVESLGEDQEFDSHTHLPGLAATK
Sbjct:    1 MAAMLEQTSGSFDNTAGGDGSGKDCSVTAPARSVLPAAGDTTDCYPLAAPPTTAEPSLEXXXXXXXXXXXXXXXXASKEHEVAHTSNTPQAVSTGALLHSNHKGGPDVKRHCPPQCICQGGKTLYNSNTQGYTKIVWEDLKNLFYMTEGAMCRIYSAEYRGAKVVVKLPRDDCEDPEIAEHDLEVELEVLWGLDHRHIIKLLGAGLREIPPYRFLVLEYLEMGTLADRLNAGAPPGQEETGYNKIIKGTKKYQRFHQVTMLERAMELAEALEYLHHSVCGGAAFVVHRDLKPDNIGFKADGTLKLFDFGLARCVKRRARVNARYDMTGETGSMRYMAPEVVESLPYNEKVDVYAFGLLLWEMLQYRRVFEGMSVGDFYQRVVNGGIRPPLDSSWPPALRKLIDLCWHADVDKRPDFHYIAAQLKDIYRXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQRXXXXXXXXXXXXXXCQEKAGGDKIAMSAISLMAEGRGRLISSPQHIARSATSTVIIHKHSTPQRNSSKAVAGGGKARLGAATGGVGGXXXXKGKGGGFMRRLGRRLLGRRSAGGTGGGIASLKDVPLERGAGLHGKGAEPLEDMDQLTSVVESLGEDQEFDSHTHLPGLAATK 632          
BLAST of jgi.p|Trimin1|353313 vs. uniprot
Match: A0A6H5L2R6_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2R6_9PHAE)

HSP 1 Score: 416 bits (1068), Expect = 6.040e-131
Identity = 213/343 (62.10%), Postives = 256/343 (74.64%), Query Frame = 1
Query:  253 TSNTPQAVSTGALLHSNHKGGPDVKRHCPPQCICQGGKTLYNSNTQGYTKIVWEDLKNLFYMTEGAMCRIYSAEYRGAKVVVKLPRDDCEDPEIAEHDLEVELEVLWGLDHRHIIKLLGAGLREIPPYRFLVLEYLEMGTLADRLNAGAPPGQEETGYNKIIKGTKKYQRFHQVTMLERAMELAEALEYLHHSVCGGAAFVVHRDLKPDNIGFKADGTLKLFDFGLARCVKRRARVNARYDMTGETGSMRYMAPEVVESLPYNEKVDVYAFGLLLWEMLQYRRVFEGMSVGDFYQRVVNGGIRPPLDSSWPPALRKLIDLCWHADVDKRPDFHYIAAQLKDIY 1281
            T+++  A  +GA  +S ++GG  V R  P Q     G      N  GY  + W +L  + YMT GAMC IYSAE  G KV VK+PR DCE+P +AEHDLEVEL+VL  + H+HI+ L+GAG RE  P+RFLVLE+LE+GTLAD+L+  A      + + +  K TKKY  F+ VTMLER+MELA ALE+LH+ +     F+VHRDLKPDN+GFKADGTLKLFDFGLAR VKRR RVNARY+MTGETGSMRYMAPEVVESLPYNEKVDVYAFGLLLWEML+ RRVF+GM V DFY+RVVN G RP LDS+WP  LRKLI  CWHADVD+RP+F  IA +L+ +Y
Sbjct:  155 TNSSNSAQRSGARSNSPYRGGGGVSR-TPGQGASSPGSGRQRENP-GYRVLQWSELSKVTYMTMGAMCEIYSAELDGVKVAVKIPRKDCEEPAVAEHDLEVELDVLKRVSHKHILGLIGAGNREQKPHRFLVLEFLELGTLADKLDGDAEEAANGSAFARRQKRTKKYLDFYMVTMLERSMELALALEHLHYHMPD--MFIVHRDLKPDNVGFKADGTLKLFDFGLARVVKRRNRVNARYEMTGETGSMRYMAPEVVESLPYNEKVDVYAFGLLLWEMLEDRRVFDGMGVTDFYERVVNAGARPNLDSAWPQDLRKLISQCWHADVDRRPNFRTIAERLRILY 493          
BLAST of jgi.p|Trimin1|353313 vs. uniprot
Match: D7FS28_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS28_ECTSI)

HSP 1 Score: 393 bits (1009), Expect = 2.480e-125
Identity = 195/282 (69.15%), Postives = 228/282 (80.85%), Query Frame = 1
Query:  436 MTEGAMCRIYSAEYRGAKVVVKLPRDDCEDPEIAEHDLEVELEVLWGLDHRHIIKLLGAGLREIPPYRFLVLEYLEMGTLADRLNAGAPPGQEETGYNKIIKGTKKYQRFHQVTMLERAMELAEALEYLHHSVCGGAAFVVHRDLKPDNIGFKADGTLKLFDFGLARCVKRRARVNARYDMTGETGSMRYMAPEVVESLPYNEKVDVYAFGLLLWEMLQYRRVFEGMSVGDFYQRVVNGGIRPPLDSSWPPALRKLIDLCWHADVDKRPDFHYIAAQLKDIY 1281
            MT GAMC IYSAE  G KV VK+PR DCE+P +AEHDLEVEL+VL  + H+HI+ L+GAG RE  P+RFLVLE+LE+GTLAD+L+  A      + + +  K TKKY  F+ VTMLER+MELA ALE+LH+ +     F+VHRDLKPDN+GFKADGTLKLFDFGLAR VKRR RVNARY+MTGETGSMRYMAPEVVESLPYNEKVDVYAFGLLLWEML+ RRVF+GM V DFY+RVVN G RP LDS+WP  LRKLI  CWHADVD+RP+F  IA +L+ +Y
Sbjct:    1 MTMGAMCEIYSAELDGVKVAVKIPRKDCEEPAVAEHDLEVELDVLKRVSHKHILGLIGAGNREQKPHRFLVLEFLELGTLADKLDGDAEEAANGSAFARRQKRTKKYLDFYMVTMLERSMELALALEHLHYHMPD--MFIVHRDLKPDNVGFKADGTLKLFDFGLARVVKRRNRVNARYEMTGETGSMRYMAPEVVESLPYNEKVDVYAFGLLLWEMLEDRRVFDGMGVTDFYERVVNAGARPNLDSAWPQDLRKLISQCWHADVDRRPNFRTIAERLRTLY 280          
BLAST of jgi.p|Trimin1|353313 vs. uniprot
Match: A0A835Z8Z5_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Z5_9STRA)

HSP 1 Score: 317 bits (812), Expect = 5.080e-97
Identity = 158/294 (53.74%), Postives = 195/294 (66.33%), Query Frame = 1
Query:  397 TKIVWEDLKNLFYMTEGAMCRIYSAEYRGAKVVVKLPRDDCEDPEIAEHDLEVELEVLWGLDHRHIIKLLGAGLREIPPYRFLVLEYLEMGTLADRLNAGAPPGQEETGYNKIIKGTKKYQRFHQVTMLERAMELAEALEYLHHSVCGGAAFVVHRDLKPDNIGFKADGTLKLFDFGLARCVKRRARVNARYDMTGETGSMRYMAPEVVESLPYNEKVDVYAFGLLLWEMLQYRRVFEGMSVGDFYQRVVNGGIRPPLDSSWPPALRKLIDLCWHADVDKRPDFHYIAAQLKDI 1278
            +++ W +L+NL Y+  GAMCRIYSA   G KV VK+ RDDC+DP  AEHDLE                           YRFLVLEYLE+GTLAD +  G   G +++   K++KG K+ +    V MLERA+E+AEA+EY+H+ +CGGA  V+HRDLKPDN+GF ADGTLKLFDFGLARC +R     ARY MTG TG++RYM PEV     YNEKVDVY+FGL+LWEMLQYRRVF G+SV +FY  V+ GG RP  D SW P L  L+  CW  D +KRP F  I A L+ +
Sbjct:   30 SEVQWNELQNLRYVGRGAMCRIYSANLGGRKVAVKIARDDCKDPSAAEHDLE---------------------------YRFLVLEYLELGTLADGIETGVMQGHQQSTLAKLVKGAKRNKHSQFVIMLERALEMAEAMEYMHYGLCGGATVVLHRDLKPDNVGFAADGTLKLFDFGLARCQRRAENNTARYSMTGNTGTVRYMPPEVARGQCYNEKVDVYSFGLMLWEMLQYRRVFSGISVREFYADVLVGGRRPTPDPSWSPELVALMKGCWSVDCNKRPCFKSIVATLRSV 296          
BLAST of jgi.p|Trimin1|353313 vs. uniprot
Match: A0A6H5LAW2_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LAW2_9PHAE)

HSP 1 Score: 280 bits (715), Expect = 6.360e-82
Identity = 146/314 (46.50%), Postives = 200/314 (63.69%), Query Frame = 1
Query:  409 WEDLKNLFYMTEGAMCRIYSAEYRGAKVVVKLPRDDCEDPEIAEHDLEVELEVLWGLDHRHIIKLLGAGL---REIPP--------------------YRFLVLEYLEMGTLADRLNAGAPPGQEETGYNKIIKGTKKYQRFHQVTMLERAMELAEALEYLHHSVCGGAAFVVHRDLKPDNIGFKADGTLKLFDFGLARCVKRRA-RVNARYDMTGETGSMRYMAPEVVESLPYNEKVDVYAFGLLLWEMLQYRRVFEGMSVGDFYQRVVNGGIRPPLDSSWPPALRKLIDLCWHADVDKRPDFHYIAAQLKDI 1278
            +E+L+++ Y+T G MC IY+AE+RG +VVVK+PRDDC  PE+A  DLE E+++L  L H +I+++LGAG     ++ P                     RF++LEYL  GTL + +    PP   +   + +++  ++  +F     ++ A++LA AL YLH     G+ FVVHRDLKP+NI F  DG LKLFDFGLA+ V+RR  R++ RY+MTGETGS RYM PEV   LPYNEK DVY+FGL+LWEML  RR FEG++  +F Q V+ GG RPPL   W  ALR+L+  CW  D+D RP+F  +   L  I
Sbjct:   42 FEELRDVQYLTNGGMCSIYTAEWRGRRVVVKMPRDDCAQPEVARKDLETEIDILQRLQHPNIVEMLGAGFVNPLDVGPDGGGGERGEFRDLDQANAESKRFVLLEYLVGGTLTESMLTRNPPA--DGMMSSVVRRWQQNWQFPTKKAIDSALQLASALSYLHGRAIEGS-FVVHRDLKPENIAFSGDGRLKLFDFGLAKIVRRRGGRLSQRYEMTGETGSTRYMCPEVAMQLPYNEKADVYSFGLILWEMLSLRRPFEGLNRKEFVQSVIKGGRRPPLQQEWSAALRELMRRCWDEDMDTRPEFEEVEDTLLQI 352          
BLAST of jgi.p|Trimin1|353313 vs. uniprot
Match: A0A835YNL8_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNL8_9STRA)

HSP 1 Score: 244 bits (622), Expect = 9.310e-70
Identity = 142/317 (44.79%), Postives = 175/317 (55.21%), Query Frame = 1
Query:  451 MCRIYSAEYRGAKVVVKLPRDDCEDPEIAEHDLEVELEVLWGLDHRHIIKLLGAGLREIPPY--RFLVLEYLEMGTLADRLNAGAPPGQEETGYNKIIKGTKKYQRFHQVTMLERAMELAEALEYLHHSVCGGAAFVVHRDLKPDNIGFKADGTLKLFDFGLARCVKRRARVN---------------------------------------ARYDMTGETGSMRYMAPEVVESLPYNEKVDVYAFGLLLWEMLQYRRVFEGMSVGDFYQRVVNGGIRPPLDSSWPPALRKLIDLCWHADVDKRPDFHYIAAQLKDI 1278
            MCRIYSA+++G KV VK PRD+  D   AE DLE+EL +L  L HRHIIKL+GAG   +     RFLVLEYLE GTL D +  GA          +++ G KK +  + +  LERA +LA+ALEYLH    G A  V+HRD+K +N GF ADGTLKLFDFGLA C  R                                            ARY MTG TG+ RYMAPEV    PYN  VDVY+FG+LLWEML   R F   +       VV G  RP LD +WP  ++ L+  CW+AD D+RPD   +A  L+ +
Sbjct:    1 MCRIYSAQWQGVKVAVKAPRDESRDCAGAERDLELELHLLQHLHHRHIIKLIGAGWHSVGRRLSRFLVLEYLEGGTLGDAIAQGAASRGRMPILKRLLGGHKKTRHQNVLQALERATQLADALEYLHCPGGGPATAVLHRDIKAENCGFTADGTLKLFDFGLAACAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGGCARYHMTGNTGTSRYMAPEVARCEPYNASVDVYSFGVLLWEMLSGGRAFANFNEQLLRSAVVYGSHRPELDRAWPAPIKSLLQGCWNADPDQRPDATAVARCLRAV 317          
BLAST of jgi.p|Trimin1|353313 vs. uniprot
Match: A0A7S2LC32_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LC32_9STRA)

HSP 1 Score: 234 bits (597), Expect = 4.270e-66
Identity = 125/295 (42.37%), Postives = 181/295 (61.36%), Query Frame = 1
Query:  409 WEDLKNLFYMTEGAMCRIYSAEYRGAKVVVKLPRDDCEDPEIAEHDLEVELEVLWGLDHRHIIKLLGAGLREIPPYRFLVLEYLEMGTLADRLNAGAPPGQEETGYNKIIKGTK----KYQRFHQVTMLERAMELAEALEYLHHSVCGGAAFVVHRDLKPDNIGFKADGTLKLFDFGLARCVKRRAR-VNARYDMTGETGSMRYMAPEVVESLPYNEKVDVYAFGLLLWEMLQYRRVFEGMSVGDFYQRVVNGGIRPPLDSSWPPALRKLIDLCWHADVDKRPDFHYIAAQLKDI 1278
            W  L+N+ Y+T+G    I++A   G  VVVK  + +C+D  +A +++E EL+V   L H +I+ L+GAGL      RF+VLE L+ GTL   L           GY+  I+  +    K ++   + +L  A  LA+AL Y H     G   V+HRD+KPDNIGF  DGTLKL DFGLA+ V       N  Y ++GETGS+RYMAPEV ++ PYN K DVY+FG++LWEML Y++ ++G++   FY R+V+GG RPP++  WP  L  L+  CW AD+++RP F  +  +L ++
Sbjct:   48 WNSLQNIEYLTDGGNSWIHTAVVNGKSVVVKTLKPECQDMAMAINEIEAELDVHARLSHENIVALVGAGLTS-KGVRFVVLERLDGGTLTQVL-----------GYDTRIRDRRRRFFKRKQLSYLEVLNHARSLADALGYCHGKAVPGT-LVLHRDVKPDNIGFTIDGTLKLIDFGLAKVVDNATPDCNDVYSLSGETGSLRYMAPEVADNRPYNHKADVYSFGIILWEMLAYKKPYDGLNRESFYVRIVDGGERPPVNKKWPKELVSLVTDCWSADIEQRPSFSAVVERLTNM 329          
BLAST of jgi.p|Trimin1|353313 vs. uniprot
Match: A0A835Z8J1_9STRA (Serine/threonine-protein kinase CTR1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8J1_9STRA)

HSP 1 Score: 238 bits (606), Expect = 3.690e-65
Identity = 122/293 (41.64%), Postives = 175/293 (59.73%), Query Frame = 1
Query:  400 KIVWEDLKNLFYMTEGAMCRIYSAEYRGAKVVVKLPRDDCEDPEIAEHDLEVELEVLWGLDHRHIIKLLGAGLREIPPYRFLVLEYLEMGTLADRLNAGAPPGQEETGYNKIIKGTKKYQRFHQVTMLERAMELAEALEYLHHSVCGGAAFVVHRDLKPDNIGFKADGTLKLFDFGLARCVKRRARVNARYDMTGETGSMRYMAPEVVESLPYNEKVDVYAFGLLLWEMLQYRRVFEGMSVGDFYQRVVNGGIRPPLDSSWPPALRKLIDLCWHADVDKRPDFHYIAAQLKDI 1278
            ++ W +L  + ++  G+ C IY+A Y     VVKL R D  D  I   +LE+E+E+L  L++ +I++LLGAG   I P RFL++E L+ GTL+ R  +G         +       K+ Q F+ + +L+   ++A+ L YLH     G   V+HRD+KPDNIGF  DG  KL D GLA+ V R    +  + MTGETGS RYMAPEV ES PYNEKVDV+++G++LWEM   R+ ++GM+   FY  VV G +RPPL+  WP     L+  CW  D   RP F  +  +L+++
Sbjct:  233 EVQWSELSEVEFLVNGSRCTIYTATYNHQACVVKLLRKDAVDAAIVRRELELEMELLMRLNNENIVRLLGAG---IEPERFLIIERLDGGTLSQRCGSGGAVRDRRRRF-------KRKQPFNYLELLKCGRQIADGLRYLHDEAIPGR-IVLHRDIKPDNIGFTKDGDAKLLDLGLAKAVPRSELQDQTFAMTGETGSTRYMAPEVAESRPYNEKVDVHSYGMVLWEMATLRKPYDGMARDQFYSAVVRGHVRPPLNKRWPKEFSDLLAACWAEDFKARPSFADVCNRLQEM 514          
BLAST of jgi.p|Trimin1|353313 vs. uniprot
Match: A0A835Z8G5_9STRA (Serine/threonine-protein kinase CTR1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8G5_9STRA)

HSP 1 Score: 233 bits (593), Expect = 9.570e-63
Identity = 127/313 (40.58%), Postives = 176/313 (56.23%), Query Frame = 1
Query:  397 TKIVWEDLKNLFYMTEGAMCRIYSAEYRGAKVVVKLPRDDCEDPEIAEHDLEVELEVLW-------------------GLDHRHIIKLLGAGLREIPPYRFLVLEYLEMGTLADRLNAGAPPGQEETGYNKIIKGTKKYQRFHQVTMLERAMELAEALEYLHHSVCGGAAFVVHRDLKPDNIGFKADGTLKLFDFGLARCVKRRARVNARYDMTGETGSMRYMAPEVVESLPYNEKVDVYAFGLLLWEMLQYRRVFEGMSVGDFYQRVVNGGIRPPLDSSWPPALRKLIDLCWHADVDKRPDFHYIAAQLKDI 1278
            T++ W +L ++ ++  G+ C IY+A YR A  VVKL R D  D  +   +LE+E+E+L                     L H +I++LLGAG     P RFLV+E L+ GTL+ R  +G         +       K+ Q F  + +L    +LA+ L YLH     G   V+HRDLKPDNIGF  DG +KL D GLA+ + R    +A + MTGETGS RYMAPEV ES PYNEKVDV+++ ++LWEM   R+ ++GM+   FY  VV G +RPPL+  WP     L+  CW  D   RP F  I  +L+++
Sbjct:  275 TQVKWAELSDVEFLVNGSRCTIYTATYREAACVVKLLRKDVPDAALVRRELELEMELLMRVLVTLXXXXXXXXXXXXXXLKHDNIVRLLGAG---DDPERFLVIERLDGGTLSQRCGSGGAVRDRRRRF-------KRKQPFSYLELLRCGRQLADGLRYLHDEAIPGR-IVIHRDLKPDNIGFNKDGDIKLLDLGLAKAIPRSEVQDAAFHMTGETGSTRYMAPEVAESRPYNEKVDVHSYSMVLWEMATLRKPYDGMARDQFYSAVVRGHVRPPLNKRWPKEFSDLLSACWSEDWRARPSFADICNRLQEM 576          
BLAST of jgi.p|Trimin1|353313 vs. uniprot
Match: A0A6H5JUQ3_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JUQ3_9PHAE)

HSP 1 Score: 229 bits (585), Expect = 4.590e-62
Identity = 125/299 (41.81%), Postives = 175/299 (58.53%), Query Frame = 1
Query:  397 TKIVWEDLKNLFYMTEGAMCRIYSAEYRGAKVVVKLPRDDCEDPEIAEHDLEVELEVLWGLDHRHIIKLLGAGLREIPPYRFLVLEYLEMGTLADRLNAGAP----PGQEETG-------YNKIIKGTKKYQRFHQVTMLERAMELAE----ALEYLHHSVCGGAAFVVHRDLKPDNIGFKADGTLKLFDFGLARCVKRRARVNARYDMTGETGSMRYMAPEVVESLPYNEKVDVYAFGLLLWEMLQYRRVFEGMSVGDFYQRVVNGGIRPPLDSSWPPALRKLIDLCWHADVDKRPDF 1248
            T + W +L+++ ++  G+ C IY+A Y+  +VVVKL R D +D  +   +LE+EL +L  + H +I++LLGAG     P RFL++  L+ GTL+ R + G+      G+ +TG         +    T+ +   H V    R     E    AL +LH     G   VVHRD+KPDNIGF ADG LKL D GL++ V +    N  ++MTGETGS+RYMAPEV ES PYNEKVDVY+FG++LWEM   ++ F+GM    F  +V+ G  RPP+   WP    +L+  CW  D  KRP F
Sbjct:  251 TSVAWAELEDVDFLVNGSRCTIYTAVYKDQQVVVKLMRKDVQDAALVRDELELELALLRRVRHENIVRLLGAGKE---PERFLIIARLDGGTLSQRCDHGSRLRDRRGRFKTGKPFSHMQVRRFFTTTQSHAGGHLVAEAGRLFNRKEVQRCALRHLHEEAIPGR-MVVHRDVKPDNIGFNADGDLKLLDLGLSKVVSKSEVDNTMFNMTGETGSVRYMAPEVAESRPYNEKVDVYSFGIILWEMSTLKKPFDGMGHDRFLSQVIRGSHRPPVHKKWPKPWSELMQSCWAEDPSKRPSF 545          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353313 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZE86_9STRA0.000e+0100.00Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A6H5L2R6_9PHAE6.040e-13162.10Protein kinase domain-containing protein n=1 Tax=E... [more]
D7FS28_ECTSI2.480e-12569.15Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A835Z8Z5_9STRA5.080e-9753.74Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A6H5LAW2_9PHAE6.360e-8246.50Protein kinase domain-containing protein n=2 Tax=E... [more]
A0A835YNL8_9STRA9.310e-7044.79Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A7S2LC32_9STRA4.270e-6642.37Hypothetical protein n=2 Tax=Leptocylindrus danicu... [more]
A0A835Z8J1_9STRA3.690e-6541.64Serine/threonine-protein kinase CTR1 n=1 Tax=Tribo... [more]
A0A835Z8G5_9STRA9.570e-6340.58Serine/threonine-protein kinase CTR1 n=1 Tax=Tribo... [more]
A0A6H5JUQ3_9PHAE4.590e-6241.81Protein kinase domain-containing protein n=2 Tax=E... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_156contigContig_156:166857..177528 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|353313|estExt_Genemark1.C_Ctg_1560020
KEGG TC1.I.1
BRITEko00000,ko00001,ko00002,ko03019,ko03036
KEGG ModuleM00427
KEGG Pathwayko03013,map03013
KEGG koko:K14304
GOsGO:0000323,GO:0000902,GO:0000904,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005765,GO:0005768,GO:0005770,GO:0005773,GO:0005774,GO:0005794,GO:0005795,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006897,GO:0006914,GO:0006928,GO:0006935,GO:0006950,GO:0006979,GO:0006996,GO:0007005,GO:0007017,GO:0007018,GO:0007154,GO:0007165,GO:0007275,GO:0007399,GO:0007409,GO:0007411,GO:0007528,GO:0008088,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009267,GO:0009605,GO:0009653,GO:0009894,GO:0009987,GO:0009991,GO:0010008,GO:0010506,GO:0010721,GO:0010769,GO:0010771,GO:0010941,GO:0010970,GO:0010975,GO:0010977,GO:0012505,GO:0016020,GO:0016043,GO:0016049,GO:0016192,GO:0016197,GO:0016241,GO:0016301,GO:0016310,GO:0016482,GO:0016740,GO:0016772,GO:0016773,GO:0017016,GO:0017137,GO:0018105,GO:0018193,GO:0018209,GO:0019222,GO:0019538,GO:0019899,GO:0022008,GO:0022603,GO:0022604,GO:0023052,GO:0030030,GO:0030100,GO:0030154,GO:0030182,GO:0030424,GO:0030425,GO:0030705,GO:0031090,GO:0031175,GO:0031267,GO:0031323,GO:0031329,GO:0031344,GO:0031345,GO:0031410,GO:0031594,GO:0031667,GO:0031668,GO:0031669,GO:0031902,GO:0031982,GO:0031984,GO:0032418,GO:0032501,GO:0032502,GO:0032879,GO:0032886,GO:0032989,GO:0032990,GO:0033036,GO:0033043,GO:0033267,GO:0033554,GO:0034613,GO:0034976,GO:0035556,GO:0036211,GO:0036465,GO:0036477,GO:0040007,GO:0040011,GO:0042147,GO:0042221,GO:0042330,GO:0042594,GO:0042995,GO:0043005,GO:0043025,GO:0043170,GO:0043195,GO:0043198,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043679,GO:0044087,GO:0044088,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044267,GO:0044297,GO:0044306,GO:0044422,GO:0044424,GO:0044431,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044456,GO:0044463,GO:0044464,GO:0045202,GO:0045595,GO:0045596,GO:0045664,GO:0045665,GO:0046907,GO:0048311,GO:0048312,GO:0048468,GO:0048488,GO:0048489,GO:0048519,GO:0048523,GO:0048588,GO:0048589,GO:0048666,GO:0048667,GO:0048675,GO:0048699,GO:0048731,GO:0048812,GO:0048814,GO:0048846,GO:0048856,GO:0048858,GO:0048869,GO:0050767,GO:0050768,GO:0050773,GO:0050774,GO:0050789,GO:0050793,GO:0050794,GO:0050803,GO:0050807,GO:0050808,GO:0050896,GO:0051020,GO:0051049,GO:0051093,GO:0051128,GO:0051129,GO:0051179,GO:0051234,GO:0051239,GO:0051241,GO:0051493,GO:0051640,GO:0051641,GO:0051645,GO:0051646,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051683,GO:0051716,GO:0051960,GO:0051961,GO:0060284,GO:0060341,GO:0060548,GO:0060560,GO:0060627,GO:0061174,GO:0061564,GO:0061845,GO:0061919,GO:0065007,GO:0065008,GO:0070507,GO:0070727,GO:0071212,GO:0071496,GO:0071704,GO:0071840,GO:0090128,GO:0097447,GO:0097458,GO:0097479,GO:0097480,GO:0097485,GO:0097708,GO:0098588,GO:0098657,GO:0098693,GO:0098791,GO:0098793,GO:0098805,GO:0098852,GO:0099003,GO:0099111,GO:0099174,GO:0099504,GO:0120025,GO:0120035,GO:0120036,GO:0120038,GO:0120039,GO:0140096,GO:0150034,GO:1900242,GO:1901214,GO:1901215,GO:1901564,GO:1902115,GO:1902284,GO:1903421,GO:1990033,GO:1990138,GO:2000026,GO:2000171,GO:2000331,GO:2000785
Descriptionprotein kinase activity
COG categoryKLT
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0515@1|root,KOG0192@2759|Eukaryota
Evalue6.03e-129
Seed ortholog2880.D7FS28
Hectar predicted targeting categoryother localisation
TranscriptId353635
TrackFilteredModels1
ProteinId353313
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353313gene_14806Tribonema minus UTEX_B_3156 geneContig_156 166857..177528 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353313Trimin1|353313|estExt_Genemark1.C_Ctg_1560020Tribonema minus UTEX_B_3156 polypeptideContig_156 166857..176250 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_14806_1exon_14806_1Tribonema minus UTEX_B_3156 exonContig_156 166857..167258 +
exon_14806_2exon_14806_2Tribonema minus UTEX_B_3156 exonContig_156 168395..168579 +
exon_14806_3exon_14806_3Tribonema minus UTEX_B_3156 exonContig_156 170007..170171 +
exon_14806_4exon_14806_4Tribonema minus UTEX_B_3156 exonContig_156 171236..171365 +
exon_14806_5exon_14806_5Tribonema minus UTEX_B_3156 exonContig_156 172182..172289 +
exon_14806_6exon_14806_6Tribonema minus UTEX_B_3156 exonContig_156 173438..173734 +
exon_14806_7exon_14806_7Tribonema minus UTEX_B_3156 exonContig_156 173847..173933 +
exon_14806_8exon_14806_8Tribonema minus UTEX_B_3156 exonContig_156 174058..174108 +
exon_14806_9exon_14806_9Tribonema minus UTEX_B_3156 exonContig_156 174895..175250 +
exon_14806_10exon_14806_10Tribonema minus UTEX_B_3156 exonContig_156 176133..176254 +
exon_14806_11exon_14806_11Tribonema minus UTEX_B_3156 exonContig_156 176832..177528 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_14806CDS_14806Tribonema minus UTEX_B_3156 CDSContig_156 166857..167258 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_14806UTR3_14806Tribonema minus UTEX_B_3156 three_prime_UTRContig_156 176251..176254 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_14806 ID=mRNA_14806|Name=jgi.p|Trimin1|353313|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2600bp|location=Sequence derived from alignment at Contig_156:166857..177528+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCTGCCATGCTGGAGCAAACCTCGGGATCCTTCGACAACACCGCTGG
CGGCGATGGTTCGGGGAAGGACTGCTCTGTCACTGCGCCAGCTCGCAGCG
TGCTGCCAGCAGCGGGGGACACCACCGATTGCTACCCATTGGCCGCCCCT
CCCACTACAGCTGAGCCATCGCTAGAGGAGCCTCCACCGCCAGCGCACGA
GGCACCCGCGGCGAGCAGCACGGCTGCCTCAAAGGAACACGAGGTGGCTC
ACACCAGCAATACGCCGCAAGCGGTGTCCACCGGAGCCTTGCTGCACAGC
AATCACAAGGGGGGGCCGGATGTGAAGCGGCACTGCCCTCCACAGTGCAT
ATGCCAAGGGGGCAAGACTCTCTACAATAGCAATACTCAGGGGTACACCA
AGATCGTATGGGAGGACCTGAAGAATTTATTCTACATGACGGAAGGAGCC
ATGTGCCGCATCTACAGCGCAGAGTACAGGGGCGCTAAGGTGGTGGTCAA
GCTGCCGCGGGATGACTGCGAGGACCCTGAGATTGCGGAGCACGATCTGG
AGGTGGAGCTGGAGGTGCTGTGGGGGCTTGATCACAGACACATCATCAAG
CTCCTAGGGGCGGGCCTGCGCGAAATTCCCCCCTACCGCTTTTTGGTGCT
GGAGTATCTTGAGATGGGGACACTGGCGGACAGGCTCAATGCGGGGGCGC
CACCCGGGCAGGAGGAAACGGGATACAACAAAATTATCAAGGGCACCAAA
AAGTACCAACGCTTTCACCAGGTGACCATGCTGGAGCGCGCTATGGAGCT
GGCGGAGGCGCTGGAGTACTTGCATCACAGCGTGTGCGGCGGCGCGGCGT
TTGTCGTTCATCGCGATTTGAAGCCTGATAACATTGGCTTTAAGGCGGAT
GGCACCTTGAAGCTGTTTGACTTTGGGCTGGCGCGTTGTGTGAAACGGAG
AGCCCGCGTGAACGCACGATACGACATGACCGGCGAAACGGGTTCCATGC
GCTACATGGCCCCGGAAGTCGTGGAATCCCTGCCCTACAACGAGAAAGTA
GATGTGTACGCCTTCGGCCTCCTTCTCTGGGAGATGCTGCAGTACCGGCG
CGTCTTCGAGGGCATGAGCGTAGGCGATTTCTATCAGCGCGTCGTTAACG
GGGGCATACGGCCACCGCTCGACAGTAGCTGGCCGCCCGCGCTGCGCAAG
CTCATAGATCTGTGCTGGCACGCGGATGTCGACAAGCGCCCCGACTTCCA
CTACATAGCCGCGCAGCTGAAGGACATCTACCGCCAGCTCATAGACCTGT
GCTGGCATGCGCACGTCGACAAGCGCCCATACTTCCTCTACATTGCCGCA
CAGCTCAAGGACATCTACCGTCAGCGCCCCGACTTCCACTACACTGCCGC
GCAGCTTAAGGACATCTACTGCCAGGAGAAGGCAGGCGGCGACAAGATAG
CCATGAGCGCCATCAGCCTAATGGCGGAAGGACGCGGACGCTTGATATCC
TCGCCGCAGCACATTGCACGCAGCGCCACTTCCACCGTCATCATACACAA
GCACTCCACCCCCCAGCGAAACTCCAGCAAGGCAGTGGCGGGGGGGGGGA
AGGCGCGATTGGGGGCAGCCACTGGGGGGGTGGGGGGTGGTGCTGCTGAC
AAGGGAAAGGGAGGGGGGTTCATGCGGCGGCTGGGGAGGCGGTTGCTGGG
GCGGAGGAGTGCGGGGGGGACGGGGGGGGGTATTGCGTCGCTGAAGGATG
TTCCGCTGGAGAGGGGAGCGGGATTGCATGGGAAAGGAGCAGAGCCCCTG
GAGGACATGGATCAACTGACGTCTGTCGTAGAGAGCTTGGGGGAAGATCA
AGAATTTGACTCACACACTCATTTGCCAGGATTGGCTGCCACCAAATGAC
AAGCGCACCAGGGACCTTTAGGCCTGCGGCACTGAGCCTCACGGCAGCTG
CGCTCGACCGAGCTCTCACGCGCAACTGACAGAAGCACAAGCATCTGCAG
TGGCATAACCCCTGCAGTGGCATAACCCCGCCTACCCTCACAAGACCCCC
ACACACGAGCACCGGTAGCTTCCGGCGACAGCAAGTGGCCGCTCCACTTC
TTGCAAACGCGCCAGATTTCCGCTGACTGGATGCACTTACAGTCAGCGGC
GCGCGCCGGCAGCAATAGCAGCAGCGCCTGGGCGCATTGCGTCCTGTGTG
ATGAATGAGCAGGTGGTTGTGCAAGAAGGGGGGCGGGCAAGGGGGAAAGC
CAGGGTCGTTCTGCAACGCACTGAAGGGGATTTGCAGCTGAGAGGCAGCA
TTTCCTGAGCACTGCTGAATCAGTGCTGATGCACGGCATCCAGCGAAGGG
GGGGGGGACTTGCTGAGAGCGACGGAACTGGTGCTGCGTGTTGGAGCAGA
ATGCATATTTGCAGAATGGCATTCTGAGACGCAATGCCAAATGAGTGCCA
GACAGACGGTGGAGAGCACCTTGCCTCGTTTGCTACTTCAAGCTCCTGCC
TGCTGCTTTGCATCGAAGCTTAACCAGGTGGCATGCCCAGTTTCCATTCC
CTTTGCATTATGAGATGCGCGCGCCAATCGAATACCAGACAGACGGTGGA
back to top

protein sequence of jgi.p|Trimin1|353313

>Trimin1|353313|estExt_Genemark1.C_Ctg_1560020 ID=Trimin1|353313|estExt_Genemark1.C_Ctg_1560020|Name=jgi.p|Trimin1|353313|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=633bp
MAAMLEQTSGSFDNTAGGDGSGKDCSVTAPARSVLPAAGDTTDCYPLAAP
PTTAEPSLEEPPPPAHEAPAASSTAASKEHEVAHTSNTPQAVSTGALLHS
NHKGGPDVKRHCPPQCICQGGKTLYNSNTQGYTKIVWEDLKNLFYMTEGA
MCRIYSAEYRGAKVVVKLPRDDCEDPEIAEHDLEVELEVLWGLDHRHIIK
LLGAGLREIPPYRFLVLEYLEMGTLADRLNAGAPPGQEETGYNKIIKGTK
KYQRFHQVTMLERAMELAEALEYLHHSVCGGAAFVVHRDLKPDNIGFKAD
GTLKLFDFGLARCVKRRARVNARYDMTGETGSMRYMAPEVVESLPYNEKV
DVYAFGLLLWEMLQYRRVFEGMSVGDFYQRVVNGGIRPPLDSSWPPALRK
LIDLCWHADVDKRPDFHYIAAQLKDIYRQLIDLCWHAHVDKRPYFLYIAA
QLKDIYRQRPDFHYTAAQLKDIYCQEKAGGDKIAMSAISLMAEGRGRLIS
SPQHIARSATSTVIIHKHSTPQRNSSKAVAGGGKARLGAATGGVGGGAAD
KGKGGGFMRRLGRRLLGRRSAGGTGGGIASLKDVPLERGAGLHGKGAEPL
EDMDQLTSVVESLGEDQEFDSHTHLPGLAATK*
back to top

mRNA from alignment at Contig_156:166857..177528+

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_14806 ID=mRNA_14806|Name=jgi.p|Trimin1|353313|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=10672bp|location=Sequence derived from alignment at Contig_156:166857..177528+ (Tribonema minus UTEX_B_3156 )
ATGGCTGCCATGCTGGAGCAAACCTCGGGATCCTTCGACAACACCGCTGG CGGCGATGGTTCGGGGAAGGACTGCTCTGTCACTGCGCCAGCTCGCAGCG TGCTGCCAGCAGCGGGGGACACCACCGATTGCTACCCATTGGCCGCCCCT CCCACTACAGCTGAGCCATCGCTAGAGGAGCCTCCACCGCCAGCGCACGA GGCACCCGCGGCGAGCAGCACGGCTGCCTCAAAGGAACACGAGGTGGCTC ACACCAGCAATACGCCGCAAGCGGTGTCCACCGGAGCCTTGCTGCACAGC AATCACAAGGGGGGGCCGGATGTGAAGCGGCACTGCCCTCCACAGTGCAT ATGCCAAGGGGGCAAGACTCTCTACAATAGCAATACTCAGGGGTACACCA AGGTACGTTGCCTGCACCTGCACTGCCCTGCGGATCGTTTCGCATCTTCA CTGTGTTGTAACCAATGAGGGTATCAAGACATTGGGCTTATGGTCATTCA TATCGCATTCGTAGTCGGGGTTGATGTGAAGGGCGCCACTTTCACGAGAC CTGTCAACTCACCACTTAAGATTGGCTGAGGGAGCGCGGTCGATGCAAAA TACCAACACAAATACGCACATCCACTGAGCATAGCGCTCAGCACACAAGC TGTGCCACCCTGCCTCATGGCAGCAAAAACAAGGAAAGTTGGCGCTATAC TTCAAGTCACGACGTGCCAATCGCGTGCCATGCTGCCGCTGTGCCGTCAG GATGATGATGCAGCGATTGTACTGTCTGGCCGCTGCTACTTCAGCGCACG CGGGGCTGGTGGTCTCAGTGACATAGGCAGCGGTGTGCGCACTCAGACGC TGTGCGATGGCCACCATGTCCAGCAAAGACGCAGCACCATAATCGTCCTG CTGTGCTGTGCGCACGTGTTGGCAATTACGGATCGCGTAACAGCTTGTCA GAACTGGTCAGAGGCATGCGGGCCCGTGTGAGATAGTCGCCACAACCGCG CATGTCCTGATGTCAGGTCGATGTAAATTGCCTGTGTCTTGCACCAGGCT TTTGCGGCCTGCATCTGGATGACATAACCGCCACTTGCAGTTGCTGCACT TGAAGTTGCTGCCCATAAACCAAGCAGCGAAGACTTGACTCAAGCCTGGA TAGTGTGATTGCGACTGAGGCTTAAAGTACCTCACTTCAAATGCCACTCG TCTCTTGACCTAAGCAACGAAACATAGTATCATGCTGCATGCACTCTGCA GACATGCGCAGCATATGGTTACGCGCTGAGTATATGCCTGCTCACAGCAC AAATAAAAGTGGGTACAGGCACACATTCATCATTTCTCGCAGCGTGCTCT CGCTGCCGCATGTGTCAGGCGTTTAAGAGCTGCATCTCTGCGTTCGTGCT GCAGCATGCAAGCAGATCACCAGTGGCACCGCTCATAGCTTGGCATACAT ACCCTTGCTGCTTCTACTCCATGCGCGGTGCCTCCTAGCTTGGCATACAC ACCCCTGCTGCTTCTGGTCCATGCTGCCGCCCCCACAGATCGTATGGGAG GACCTGAAGAATTTATTCTACATGACGGAAGGAGCCATGTGCCGCATCTA CAGCGCAGAGTACAGGGGCGCTAAGGTGGTGGTCAAGCTGCCGCGGGATG ACTGCGAGGACCCTGAGATTGCGGAGCACGATCTGGAGGTGGAGCTGGAG GTGCTGTGGGGGCTTGATCACAGGTACGTATGTATGGCCACATATGTGGG TAGGCAGGTAGGTAGGACCCCGAGATTGCGGAGCACGATCTGGAGGTGGA GCTGGAGGTGCTGTGGGGGCTTGATCACAGGTATGCATGTATGTATGTAT GGTTGCATGCATGGGTAGGTAGGTAGGTAGGACCCTGAGATTGCGGAGCA CGATTTGGAGGTGGAGCTGGAGTGCCACATGCATGGGTAGGTAGGTATAT CTTCAGTGTTTTTCACGGTGTCTACTTTTTTAGACCGTGTCTGGCAGTGC TGTTGTAGTGTGAGTAGGGGATTGATTACAGTCAGGCATGTATGCACGTC TATGGGTAGGTGTACATACCCATGTGTCTGGCGTCAGTGCATTGTCCGCG GAGCATAATCTGGTGGCCTGGCACAATCATATATGTTGTGTGATTAGGTA GGTAAGTATGAATGATGGGTAGGTAGGCACATCTATGGTGGGAACGGGAT GCGCTTAAGCACATCCTGTGTGCACTGGCAGCCATTCGCTAAGTGTACTG TGTCTATACCGCACATACTCTATGTGAGTGATGATCGCCTGCTGAGCATC ATCACGCAGTGACCCGGAATTCGTGTTGGTAGGTACAAAGGTACATTAGT TGAAGTTGAGCAATAAGATGTGGGATTTACGCCTGTCATCCAATTGCATC ACTATAGTTGGGTATACTACTATGGAAACGAGCTGTACTAAAGCTCGTAC TATATGTCAGCGAATGCTGCCGCGTGAATTATGTTGAAGTTGAAGTTGCA AGGTTCAGTGTGATGTGGATGTCAGCAGCAGAGACAGAGAAAGTGGCTTC AGGCGTAGTGAGATGCATAGAGTTAGAGCGACGCGCCAGCGAGTTGAACT TCAAGTACATGAGCCTTAACTTGAAGTGCAGTTCCACAACGCGCTCAACA AACAAAAGCATTCCCACTTCAAAGCCAGTGCTGCTCACCAACCAGCATCC AATCAGATGCATGTTTTGTGATAAGCAGCACATGACTTATCGACAACGCA CCGCATCTGTGGAGTCATGATGTCTGTAGTATCGCACACACTCAGGCCGT CATACTCAGCTTCTCCTGTTGCGCATTCTCAAGATTCTTCCGTCATCAAT GGCTGTGCGGTCCCTCGGCAGGCATGTCTCAATCGCACAAATACCAGTGC CTTGTAGTACATCGCGTGTATATGTATATGTAGGTAGGTAGGTATGAAAT GCCGTCAGCTTGATCCCATATGTAGTCACCTCTTCACTTTGCCAGGCGCA TGTCTCAGTCGCACCTCATACCTGTTTTTCGTCATGCATGTACGTATATA CGCATGTACCTATTTCAGGAAGTATGTACTTAATGCTACACCGCCATCAG CACGGTCCCATCGTGACCCCCCCCCCCCCCCTCTGTTTACTTCTTTTCAG ACACATCATCAAGCTCCTAGGGGCGGGCCTGCGCGAAATTCCCCCCTACC GCTTTTTGGTGCTGGAGTATCTTGAGATGGGGACACTGGCGGACAGGCTC AATGCGGGGGCGCCACCCGGGCAGGAGGAAACGGGATACAACAAAATTAT CAAGGGCACCAAAAAGTGAGTCACACTTGAAGTAGCAACAAATGTTGACG TAGTTGTTGCTCAATGAGTCACACTCGAAGTAGCAACAAATGTTGAAGTA GTTGTTTCTCAATGCGGGGGCGCCGCCGGGGCAGGAGGAAACGGGATACA ATGAATTACTAGGGCACAAAAAAGTGAGTCACACTTAAAGTAGCAACAGC TGCTGTGCGTGCAGCCACAGTTGAGTTTGTCAGCGAGGTGCAACTGGGGT TAACTCCACCGGGGCAGGAGGAGACAGGATACAACAAAATTATCAAGGGC GCAAAGAAGTGCGTCACACTTGAATCAACATCACTCCCTGACAACTCCAC AGGCAATGCAGGAGGAGACGCGATACAACAAATTGTTGAGGGCACTCAAC AGTGAGGCACACTTGAAGTAGCATCGTTGTTGACAACTTCACAGGCTCAA GCAGGGGCCCCGCGGGGGCAGAGGAAACGGGGGGGGGGGAGTACAACAAA ATAACCAAAGAAGTGGGTCACACTAGAATGACTCATACTTGATGTGGAAG TGAGTCATTACCTGGTGTAGCATATGTTTGTTGGCAGCATCATTTACGCA TTTGGAGACACATTCGGTGCACTACAATCATCCGGGCACCAAATGGTGAG TCACACTTGAAATGGAAGTAGCAACAACTGTTGTACGCGGCAGCAGCAAC CATAGTTGAGTGGTCAGGTTTTTGCTTGATGGCGCAAAAAGGTAGCGACG ATCGAATCGGCATGGTGAATCACTTGTTGCACTTTGTTCCACGCTCTCCT GCTCGCAGGTGCCAACGCTTCCACCAGATGTCCATCACTCAAGCGAGCAC CAGCACTTGAACTTCAACTTCAACTATTCAATAGCATGATTTCAATCGCT CATATGTTGAGTCACATGTTGCGTTGAGTCACATGTTGCACTTCACCCTG CTCTTGCAGGTACATACCAACGCTTTCACCTGGTGACCATGTTGGAGCGA GCACTAGAACTTGATCTTTGACTTCAACTGCTCAACGCCACGTCACATGT TGCACTTCGCCGTGCTCTCCTGCCCGCAGGTACCAACGCTTTCACCAGGT GACCATGCTGGAGCGCGCTATGGAGCTGGCGGAGGCGCTGGAGTACTTGC ATCACAGCGTGTGCGGCGGCGCGGCGTTTGTCGTTCATCGCGATTTGAAG CCTGATAACGTGAGCGAACGCTTGTGGCCAAGTGATGCAGCAGCGGCGAC CACGGTTTCTGGTGGAAGGCACTGGCGGCTCATCACACTTTGTCACGTAG AGCTCTATGATGTTTTTGAATCGTATCCGCGAGCAAACGCTCAGCTGTAA AACAGCACACAAAAAGTGTAGTAGTAGGCGTTTCTCGTCCATCGCGATTT GGAGCCTGTGAGCAAAAACGCCCAGCTGCACAATGTTCACCTGACCCAGT AGACTACTATCATTGTGTGCTGTTTGCTTGCTGATGCGGTTGCAGGTACT GTTGGTGCTGACCTTAACCCTGACCATCAGCTGCATGCAAAGCGTGCGTG TGGCTGCCGGAGTTTCACGTTATTAGGGTTAGGGCTAGAGTTAGGGTTGG GTTAAAGGTAGGGGTAGGGTTAAAGCTGCACGCAGCACGCAGCCTCTCAC TACTCACACCTGGCTGCGTGAGCCCACCTTGTCCTTCGTGTCGTGATGAC ATGCTGTTGGTTGTCGTTGCAGTTAATTGGGTGCAAAGCGTGCGCGTTGT GTAACCCCTGCCTGTCAGGGTCTTGCAGCACCGCCATCTACATGCATATC GCATGTACTGACCTGGCATATTGCATGTACAGCAGATGTACAGCAGCTGT ACACTGCTGTACCCATTTGGCTGCGAGCTTTGTCTCAATGTGCGGCGCCT GACACACACGTGTTTCCATAGCAGCTGTAGACTCTACTCTTCTCATGCGG TTTGCATGACGCGTTGACTCATTGACTCATCATGAGACTCATGTGTCATT GTGCATCGCATGCGGCCAACTGCAGATTGGCTTTAAGGCGGATGGCACCT TGAAGCTGTTTGACTTTGGGCTGGCGCGTTGTGTGAAACGGAGAGCCCGC GTGAACGCACGATACGACATGACCGGCGAAACGGTGAGAACTTCAACATG ATAGTACTACTCGTGAGGCAATCTGCATTTCAACCCATAGACTATATGTA CTCAAGTATGGACTTCAACTACAGTATTTGAAGGAACTTCAACTTAGTGT TCATCAGAGGCATTTGGCGTGATATGACATGACTGGCGAAACGGTGAGAG CCTCAACATGGCATTGAAGTAGTACTAGTCATGAGGCATATGCGCTTCAC AGCTTTTTTTACTCGCGTGTGACATTGAACCATGGTATCCAAAGAACCTT CAACTTAGTGAAGCGGAGGGCCTGCGTGAATGTGCGATATGACATGACCG GCGAAACGGTAAGAACTTCAATATTGCATTGAAGTACTAGTGTGAGGCTC TTGAACTCAATTTATCAACTTCAACTTTGATATCAAAAGGAACTGGAGCC TAGAATTTATCAGAGGCATTTTCAAGCATCTGGCAGTGTGCAGTATAGCT TGACAGGCGAAACGGCAAGATCTACTGCAGCATAGCGTGTCGGAGTCATT TGTTGTTGGCATCAGCGGGTGTTGTGGGACTGGCAAGACAACAGCACATT CACGCACACTTGGTAATGGAGTAATACAGCTGTGCGTCTTGGGAGGCATT GATACGATCTGCAGTGCTCAAACGCAACATGGCACGGAACTCCAACTCAG AACATCACATCGAATCCTTCTTGTGAGGTTTCATAACAGTTTCATGTTTT GAAGTCATTCATTGGAAACTGGCAGTTTGCAGGTGAGAGGGCCGGGGGCG CGCACAAATGCGCCTTCAAGCTGAAGTAGACGTCTGACACCCTGACGAGG TACTGGCAGTGGTGTAGACTCGCTCCTGCACCATCGGTACACTTAAAATT GCTGATGAACCAGCCCTTTGGATAAGCTCAATGTACCACTGCACTCCCCC TTTCCACTCACCCCCTATTTGTGCATGCCCGCGGAGGTCGTGATCTCGCA CACTCTACAAAGCTCTTTTACTGACATGTACAAATGCCTGCCGCATCATC ACTGACCTTCTCTCTTCCACTCACCCCCTTTCTGCGCAGGGTTAGTACAA CTGCTCTTTTACCGACATGTACATATGCCTGCCGCGGTCACCACTGACCT TATCCCTTCCACTCGCTCCCTGTTTCCACAGGGTTCCATGCGCTACATGG CCCCGGAAGTCGTGGAATCCCTGCCCTACAACGAGAAAGTAGATGTGTAC GCCTTCGGCCTCCTTCTCTGGGAGATGCTGCAGTACCGGCGCGTCTTCGA GGGCATGAGCGTAGGCGATTTCTATCAGCGCGTCGTTAACGGGGGCATAC GGCCACCGCTCGACAGTAGCTGGCCGCCCGCGCTGCGCAAGCTCATAGAT CTGTGCTGGCACGCGGATGTCGACAAGCGCCCCGACTTCCACTACATAGC CGCGCAGCTGAAGGACATCTACCGCCAGGTCAGTACAGTAATTCTAGACA ATAGTAGCGCTCGATAGGTAGTACAGTAGCGCTAGATGGTACGCATTAGG GTCAGGTAGGGTTAGCAGCTGGCCTCCCGCGCTGCGCAAGCTCATAGACC TGTGCTGGCATGCGCACGTCGACAAGCGCCCATACTTCCTCTACATTGCC GCACAGCTCAAGGACATCTACCGTCAGGTCAGTACAGTAGCGCTATAGAA AGCGCTCGATAGTACAGTAGCGCTAGATAGTGAGGGTTAGGGTTAGGGTT AGTGTTGGGGTTAGGGTTAGGGTCAGCAGAGCAGTGCTCAACAAACACAA GCGCCCCGACTTCCACTACACTGCCGCGCAGCTTAAGGACATCTACTGCC AGGTCAGTGTGTACCCTACTCAAGTGCTCGGTAGTAGCGCTAGATAGTGA GGGGTAGGGTTAGGGTTAGGTTAGGGTTAGGGTCAGTAGAGCAGTGCTCA ATATACACAGCGCGCCGACTTCTACTAACCCTGACCCTAACCCTAACCTT CGCCGCGAATTTACCGGCACGTCAGTACAGTAGTTCTAGACATTAAGTAG GGCTCAATAGTAGCGCTAGATAGTAAGGGTTATAATTAGTGTTAGGTTTC TGTTAGAGTAAGGGTTAGGGTAGCTGGGGGGTCAGTTGTCAGTGCTAGTG ATGATGCAGCTGTGCTCAGCAGATGTACGCTATCGGGCAGCAGCAATCAG CAAGAAGGTGGGCTGCAATAACGTAGCATTACTGCCATCGCGTCATCCGT ACTACCCCACGTGCCGTTTTGTATAGTTCTAATGTATACCTACGTACCCT CTGAATGCTTTTCGTACCCTTGCATCGCACAACAGGAGAAGGCAGGCAGT GTCAAGATATGTAGCCATGAGCGCCATCAGCCTTATTAACAAGCCACATG TCATTATTCCTGTATGGGTTGACGCACATGCCTACATGCCCTCACAACTG CCCTACGCACCTACCCTCTCAACACATATAACAGGTGGGCGGTGACATGA TAGCCATGAGCGCCATCAGCCTCACTCAAACTCTACTTGAATCATGTGTC TTTTTCCAGCCCACAATGCATACCTTACACACCCCACGAAATGCTCTAAA ATGCGTACCCACATACCTTCCCTCTTATGACACAACAGGAGAAGGCAGGC GGCGACAAGATAGCCATGAGCGCCATCAGCCTAATGGCGGAAGGACGCGG ACGCTTGATATCCTCGCCGCAGCACATTGCACGCAGCGCCACTTCCACCG TCATCATACACAAGCACTCCACCCCCCAGCGAAACTCCAGCAAGGCAGTG GCGGGGGGGGGGAAGGCGCGATTGGGGGCAGCCACTGGGGGGGTGGGGGG TGGTGCTGCTGACAAGGGAAAGGGAGGGGGGTTCATGCGGCGGCTGGGGA GGCGGTTGCTGGGGCGGAGGAGTGCGGGGGGGACGGGGGGGGGTATTGCG TCGCTGAAGGATGTTCCGCTGGAGAGGGGAGCGGGATTGCATGGGTGAGA GAACGTGCTTAATGACCGCTGTTTAGAGGTGGTGTAGGGGTGATGCAGTT GCAGTCATATGCTGCCATTGAGAAGGGGTAGGTGCTGAAGGATGTTCCGC TGGAGAGGGGTGCGGGGTTACATGGGTGAGATAATGTGCCTGATAAGCGG TTGTGTGGGTGAGAAAACGTGCTTAGCAAGTGTTTTTCGTGAGAGAACGT GCTTTGAAATAAGCGCTTACATGATTGAAAGCACGCGGATGATGAGTGCG TTTTGGAGGTCGTGTAGGGCTGATGCAGTTGCAGTTGGATGCTGCCGTTG GATAGGAGCAGGGGCAGAGTCCTTGAGATGTCTATCAAAGAAGAACAGTT GGGATGTGCTGCTGTAGATGTGACAGGGATGCCAGGATGAAGGAGCGAGA GGACGTGCTTGATAAGGTCTACTTAGACTGAAACGGTAGTTGCAGTCATT GTCTGCAAATCTAATCATCATACATTGAAGTATAGGGCTAATGATATCCG TTTGAGGCAGTATAGGGGTGCTATATTCCTAAGTACGACTGCAACTTAGA TGCGCAGTGATTGGACCTGTATATTTCTACCGCTAGTGCCTGTAGTTGTG GAGATTCTTTTGCTCAAGCAGCACCCGCAAGCGATGGGAGCAGCGTCACA TGTGGCCCTGTCTTGCACCCAGTAGCCCTGGACGCATCTTGCCCACTTTG CAAGTAACCCTGACTCTGACACATGCAAAGGAGCAGAGGTGCCACTGTGG TTCACACTTCAACTTGAAGTTGTTCATACCAGTGCAACATGCTGGTGCAA GCGTTTTGGCGCATGACATGTCACTGCCTTACTCTGACCCCACCCCTTCG CTCACTCTAACTTCACGTCCGTACAGGAAAGGAGCAGAGCCCCTGGAGGA CATGGATCAACTGACGTCTGTCGTAGAGAGCTTGGGGGAAGATCAAGAAT TTGACTCACACACTCATTTGCCAGGATTGGCTGCCACCAAATGACAAGGT GCGTGTGAGCTTCAATGAACTTGTATGCCAACACATCGCACACAATTGAT GTTTTCAGCGATTCGGCAATGATGTGTTCAGTAAATTGCCCTCCGAAATG TATGCACGATGTGTCGTCCATGACAGAGCAATAGGGCTCGAAAACTGTGC ATAAGGCATGTGAGTGGCACAAAGCATGAGCACTGTCTCCAGCAGCAATA CGCCACAGACTGCGTGCAGGCAACGGTGAGGTGAGGTGAATGTACATGGC CAACTCACTTGCAAGTGTGTGGATGCATAGAAGTGCGTAACTTGATGTTC TGTCAGGCCTGCTATTCCCGCAGCTACACACCAGGACCTCGTCAACCTTG AAGTTCATACTTCAAAGATGAAGTACATCTGCACCGCTCTCACAACATCA CAATGCTGAGGATCCCTGGCTCTGGTCAAAGGCCCGTTGATATACTCGTG TCGCGCGTGTGCGCCATGCGATCCGCTTGAATATTGGATGCGGCAACTCC GTTGCAGTGCCAATGTCAACATTGAAGTTGCAGTGTCTGACCCAGACCAT CCACTACCTCTGCCGCCTCCCGCAGCGCACCAGGGACCTTTAGGCCTGCG GCACTGAGCCTCACGGCAGCTGCGCTCGACCGAGCTCTCACGCGCAACTG ACAGAAGCACAAGCATCTGCAGTGGCATAACCCCTGCAGTGGCATAACCC CGCCTACCCTCACAAGACCCCCACACACGAGCACCGGTAGCTTCCGGCGA CAGCAAGTGGCCGCTCCACTTCTTGCAAACGCGCCAGATTTCCGCTGACT GGATGCACTTACAGTCAGCGGCGCGCGCCGGCAGCAATAGCAGCAGCGCC TGGGCGCATTGCGTCCTGTGTGATGAATGAGCAGGTGGTTGTGCAAGAAG GGGGGCGGGCAAGGGGGAAAGCCAGGGTCGTTCTGCAACGCACTGAAGGG GATTTGCAGCTGAGAGGCAGCATTTCCTGAGCACTGCTGAATCAGTGCTG ATGCACGGCATCCAGCGAAGGGGGGGGGGACTTGCTGAGAGCGACGGAAC TGGTGCTGCGTGTTGGAGCAGAATGCATATTTGCAGAATGGCATTCTGAG ACGCAATGCCAAATGAGTGCCAGACAGACGGTGGAGAGCACCTTGCCTCG TTTGCTACTTCAAGCTCCTGCCTGCTGCTTTGCATCGAAGCTTAACCAGG TGGCATGCCCAGTTTCCATTCCCTTTGCATTATGAGATGCGCGCGCCAAT CGAATACCAGACAGACGGTGGA
back to top

Coding sequence (CDS) from alignment at Contig_156:166857..177528+

>mRNA_14806 ID=mRNA_14806|Name=jgi.p|Trimin1|353313|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1899bp|location=Sequence derived from alignment at Contig_156:166857..177528+ (Tribonema minus UTEX_B_3156 )
ATGGCTGCCATGCTGGAGCAAACCTCGGGATCCTTCGACAACACCGCTGG
CGGCGATGGTTCGGGGAAGGACTGCTCTGTCACTGCGCCAGCTCGCAGCG
TGCTGCCAGCAGCGGGGGACACCACCGATTGCTACCCATTGGCCGCCCCT
CCCACTACAGCTGAGCCATCGCTAGAGGAGCCTCCACCGCCAGCGCACGA
GGCACCCGCGGCGAGCAGCACGGCTGCCTCAAAGGAACACGAGGTGGCTC
ACACCAGCAATACGCCGCAAGCGGTGTCCACCGGAGCCTTGCTGCACAGC
AATCACAAGGGGGGGCCGGATGTGAAGCGGCACTGCCCTCCACAGTGCAT
ATGCCAAGGGGGCAAGACTCTCTACAATAGCAATACTCAGGGGTACACCA
AGATCGTATGGGAGGACCTGAAGAATTTATTCTACATGACGGAAGGAGCC
ATGTGCCGCATCTACAGCGCAGAGTACAGGGGCGCTAAGGTGGTGGTCAA
GCTGCCGCGGGATGACTGCGAGGACCCTGAGATTGCGGAGCACGATCTGG
AGGTGGAGCTGGAGGTGCTGTGGGGGCTTGATCACAGACACATCATCAAG
CTCCTAGGGGCGGGCCTGCGCGAAATTCCCCCCTACCGCTTTTTGGTGCT
GGAGTATCTTGAGATGGGGACACTGGCGGACAGGCTCAATGCGGGGGCGC
CACCCGGGCAGGAGGAAACGGGATACAACAAAATTATCAAGGGCACCAAA
AAGTACCAACGCTTTCACCAGGTGACCATGCTGGAGCGCGCTATGGAGCT
GGCGGAGGCGCTGGAGTACTTGCATCACAGCGTGTGCGGCGGCGCGGCGT
TTGTCGTTCATCGCGATTTGAAGCCTGATAACATTGGCTTTAAGGCGGAT
GGCACCTTGAAGCTGTTTGACTTTGGGCTGGCGCGTTGTGTGAAACGGAG
AGCCCGCGTGAACGCACGATACGACATGACCGGCGAAACGGGTTCCATGC
GCTACATGGCCCCGGAAGTCGTGGAATCCCTGCCCTACAACGAGAAAGTA
GATGTGTACGCCTTCGGCCTCCTTCTCTGGGAGATGCTGCAGTACCGGCG
CGTCTTCGAGGGCATGAGCGTAGGCGATTTCTATCAGCGCGTCGTTAACG
GGGGCATACGGCCACCGCTCGACAGTAGCTGGCCGCCCGCGCTGCGCAAG
CTCATAGATCTGTGCTGGCACGCGGATGTCGACAAGCGCCCCGACTTCCA
CTACATAGCCGCGCAGCTGAAGGACATCTACCGCCAGCTCATAGACCTGT
GCTGGCATGCGCACGTCGACAAGCGCCCATACTTCCTCTACATTGCCGCA
CAGCTCAAGGACATCTACCGTCAGCGCCCCGACTTCCACTACACTGCCGC
GCAGCTTAAGGACATCTACTGCCAGGAGAAGGCAGGCGGCGACAAGATAG
CCATGAGCGCCATCAGCCTAATGGCGGAAGGACGCGGACGCTTGATATCC
TCGCCGCAGCACATTGCACGCAGCGCCACTTCCACCGTCATCATACACAA
GCACTCCACCCCCCAGCGAAACTCCAGCAAGGCAGTGGCGGGGGGGGGGA
AGGCGCGATTGGGGGCAGCCACTGGGGGGGTGGGGGGTGGTGCTGCTGAC
AAGGGAAAGGGAGGGGGGTTCATGCGGCGGCTGGGGAGGCGGTTGCTGGG
GCGGAGGAGTGCGGGGGGGACGGGGGGGGGTATTGCGTCGCTGAAGGATG
TTCCGCTGGAGAGGGGAGCGGGATTGCATGGGAAAGGAGCAGAGCCCCTG
GAGGACATGGATCAACTGACGTCTGTCGTAGAGAGCTTGGGGGAAGATCA
AGAATTTGACTCACACACTCATTTGCCAGGATTGGCTGCCACCAAATGA
back to top