mRNA_1470 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|161970
Unique NamemRNA_1470
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|161970 vs. uniprot
Match: A0A835Z861_9STRA (Metallo-dependent phosphatase-like protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z861_9STRA)

HSP 1 Score: 504 bits (1299), Expect = 8.520e-181
Identity = 242/248 (97.58%), Postives = 245/248 (98.79%), Query Frame = 1
Query:    1 MQLQLASDLHLEQGCTSNYCSIIKPAADILIMAGDVAYATHAQIPPFMRKMSEAFEKVLLVPGNHERYSHDLSMSMTEMDMHLHGVLQEFSNVSLLNNKVEEWKGVKFVGSTLWSHIPQQDRYEVSTCINDYRYILDGTGRAITPSYTSGLHRDAVAFLEKHCDTNSVVITHHCPQTTRTSHPRYAGSPTNCAFSTDVSLAQMPQLWVSGHTHFNHDFVKAGTRFISNQYRNENWCMPYSASKTVTIA 744
            MQLQ+ASDLHLEQGCTSNY SIIKPAADILI+AGDVAYATHAQIPPFMRKMSEAFEKVLLVPGNHERYSHDLSMSMTEMDMHLHGVLQEFSNVSLLNNKVEE KGVKFVGSTLWSHIPQQDRYEVSTCINDYRYILDGTGRAITP+YTSGLHRDAVAFLEKHCDTNSVVITHHCPQTTRTSHPRYAGSPTNCAFSTDVSL QMPQLWVSGHTHFNHDFVKAGTRFISNQYRNENWCMPYSASKTVTIA
Sbjct:    1 MQLQIASDLHLEQGCTSNYYSIIKPAADILILAGDVAYATHAQIPPFMRKMSEAFEKVLLVPGNHERYSHDLSMSMTEMDMHLHGVLQEFSNVSLLNNKVEERKGVKFVGSTLWSHIPQQDRYEVSTCINDYRYILDGTGRAITPAYTSGLHRDAVAFLEKHCDTNSVVITHHCPQTTRTSHPRYAGSPTNCAFSTDVSLTQMPQLWVSGHTHFNHDFVKAGTRFISNQYRNENWCMPYSASKTVTIA 248          
BLAST of jgi.p|Trimin1|161970 vs. uniprot
Match: A0A835Z6I0_9STRA (Metallo-dependent phosphatase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6I0_9STRA)

HSP 1 Score: 277 bits (708), Expect = 7.590e-91
Identity = 135/249 (54.22%), Postives = 177/249 (71.08%), Query Frame = 1
Query:    1 MQLQLASDLHLEQGCTSNYCSIIKPAADILIMAGDVAYATHAQIPPFMRKMSEAFEKVLLVPGNHERYSHDLSMSMTEMDMHLHGVLQEFSNVSLLNNKVEEWKGVKFVGSTLWSHIPQQDRYEVSTCINDYRYILDGTGRAITPSYTSGLHRDAVAFLEKHCDTNSVVITHHCPQTTRTSHPRYAGSPTNCAFSTDVSLAQMPQLWVSGHTHFNHDFVK--AGTRFISNQYRNENWCMPYSASKTVTI 741
            M++ + SD+HLE G    + S++   AD+L++AGD+A AT  ++P F+ + SE +E+VL VPGNHE Y    S SM EM   L   L  F NV+LL++ V E  GVKFVGSTLWS +P     EVS C+NDYR++     R I+P  T+ LH ++V FL +HCD +SVVITHHCP+T +TSHPRY GS  +CAF+TDVSL +MP+LWVSGHTHFNHDF +   GTRF+SNQYRNENW +P+S + T+ I
Sbjct:    1 MRIHVVSDVHLEYGGAPPFSSLVAAEADVLVLAGDIAAATCPELPDFVARASEIYERVLYVPGNHEYYHS--SNSMAEMRACLRAALDPFGNVTLLDDDVAEIGGVKFVGSTLWSRVPADSELEVSRCVNDYRFVR-AKCRPISPCETTELHAESVDFLRRHCDADSVVITHHCPRTRKTSHPRYDGSSASCAFATDVSLPRMPRLWVSGHTHFNHDFQEPQGGTRFLSNQYRNENWRLPHSPTMTLEI 246          
BLAST of jgi.p|Trimin1|161970 vs. uniprot
Match: A0A835Z038_9STRA (Metallo-dependent phosphatase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z038_9STRA)

HSP 1 Score: 264 bits (674), Expect = 9.940e-86
Identity = 127/247 (51.42%), Postives = 170/247 (68.83%), Query Frame = 1
Query:    1 MQLQLASDLHLEQGCTSNYCSIIKPAADILIMAGDVAYATHAQIPPFMRKMSEAFEKVLLVPGNHERYSHDLSMSMTEMDMHLHGVLQEFSNVSLLNNKVEEWKGVKFVGSTLWSHIPQQDRYEVSTCINDYRYILDGTGRAITPSYTSGLHRDAVAFLEKHCDTNSVVITHHCPQTTRTSHPRYAGSPTNCAFSTDVSLAQMPQLWVSGHTHFNHDFVKAGTRFISNQYRNENWCMPYSASKTVTI 741
            M +Q  SD+HLEQG    +  ++ PAAD+LI+AGDVA A H  +P F+R  SEAFEKVL V GNHE YS     SM E++ H+  ++ E+SNVS++N  V EW+GV FVG T+WSH+P   R E + C+NDYR++    G  ++P+ T   H+   AFL  +   +SVVITHH P+T  TSHPRYAG   NC F+TD++L  MP+LW++GHTHFN DFV   TRF+SN +RNEN+ +P+S  KT+ I
Sbjct:    1 MLIQFLSDVHLEQGAVP-FSDVVTPAADLLIVAGDVAPARHFSLPYFVRHCSEAFEKVLWVYGNHEWYSQ--CESMDEIESHMADLISEYSNVSIMNRDVIEWRGVNFVGCTMWSHVPASAREEAALCVNDYRFVRKEHG-PVSPADTDAFHQRDSAFLSSNSTADSVVITHHAPRTRTTSHPRYAGCSNNCCFATDMNLPAMPKLWIAGHTHFNFDFVDGDTRFVSNMFRNENYRVPFSRCKTIEI 243          
BLAST of jgi.p|Trimin1|161970 vs. uniprot
Match: A0A835YX12_9STRA (Metallophos domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX12_9STRA)

HSP 1 Score: 247 bits (630), Expect = 1.090e-75
Identity = 119/226 (52.65%), Postives = 157/226 (69.47%), Query Frame = 1
Query:   64 IIKPAADILIMAGDVAYATHAQIPPFMRKMSEAFEKVLLVPGNHERYSHDLSMSMTEMDMHLHGVLQEFSNVSLLNNKVEEWKGVKFVGSTLWSHIPQQDRYEVSTCINDYRYILDGTGRAITPSYTSGLHRDAVAFLEKHCDTNSVVITHHCPQTTRTSHPRYAGSPTNCAFSTDVSLAQMPQLWVSGHTHFNHDFVKAGTRFISNQYRNENWCMPYSASKTVTI 741
            ++ PAA++LI+AGDVA A H  +P F+R  SEAFEKVL V GNHE YS     SM E   H+  ++ E+SNVS++N  V EW+GVKFVG T+WSH+P   R E + C+NDYR++    G  ++P+ T   H+   AFL  +   +SVVITHH P+T  TSHPRYAG   NC F+TD++L  MP+LW++GHTHFN DFV   TRF+SN +RNEN+ +P+S  KTV I
Sbjct:  288 VVTPAAELLIVAGDVAPAHHFALPYFVRHCSEAFEKVLWVYGNHEWYSR--CESMDESASHMADLISEYSNVSVMNPDVVEWRGVKFVGCTMWSHVPVSAREEAALCVNDYRFVRKAHG-PVSPADTDAFHQRDSAFLSSNSTADSVVITHHAPRTRTTSHPRYAGCSNNCCFATDMNLPAMPKLWIAGHTHFNFDFVDGDTRFVSNMFRNENYRVPFSPCKTVEI 510          
BLAST of jgi.p|Trimin1|161970 vs. uniprot
Match: A0A1W6E5L5_9BACT (Metallophos domain-containing protein n=2 Tax=Fibrella TaxID=861914 RepID=A0A1W6E5L5_9BACT)

HSP 1 Score: 133 bits (334), Expect = 2.470e-34
Identity = 88/243 (36.21%), Postives = 132/243 (54.32%), Query Frame = 1
Query:    1 MQLQLASDLHLEQGCTSNY--CSIIKPAADILIMAGDVA----YATHAQIPPFMRKMSEAFEKVLLVPGNHERYSHDLSMSMTEMDMHLHGVLQEFSNVSLLNNKVEEWKGVKFVGSTLWSHIPQQDRYEVSTCINDYRYILDGTGRAITPS-YTSGLHRDAVAFLE----KHCDTNSVVITHHCPQTTRTSHPRYAGSPTNCAFSTDVS---LAQMPQLWVSGHTHFNHDFVKAG-TRFISN 684
            M +Q  SDLHLE    + Y   + I+PA D+LI+AGD+     Y +  Q   F + +S  F +V  VPGNHE Y    S+    +D  L   L   +NV LLNN    + GV+F+ STLWSHI Q++ Y++ T + D++ +++  G  + P+ YT  LH+ ++ FL     K     +VV+THH P   +  HPR+ GS     F T++    L   P  W+ GH+H N   ++ G T+ +SN
Sbjct:    1 MTIQYVSDLHLEFPDNATYLLANPIEPAGDVLILAGDITSLAYYKSRKQEKAFFKTLSNQFRQVYYVPGNHEFYR---SLDARLLDQPLQETLH--ANVFLLNNVARTYGGVRFLFSTLWSHIDQENEYQLGTGMADFQ-LINYRGNRLKPAMYTRFLHQPSLDFLRTELAKPVSEPTVVVTHHLPSL-QCVHPRHTGSLLEQGFVTNLDSLILDTQPAYWIYGHSHANRPAIQLGNTQLLSN 236          
BLAST of jgi.p|Trimin1|161970 vs. uniprot
Match: A0A4Q3PKY6_9BACT (Metallophosphoesterase n=1 Tax=Cytophagaceae bacterium TaxID=2026729 RepID=A0A4Q3PKY6_9BACT)

HSP 1 Score: 128 bits (322), Expect = 1.490e-32
Identity = 85/243 (34.98%), Postives = 131/243 (53.91%), Query Frame = 1
Query:    1 MQLQLASDLHLEQGCTSNY--CSIIKPAADILIMAGDVA----YATHAQIPPFMRKMSEAFEKVLLVPGNHERYSHDLSMSMTEMDMHLHGVLQEFSNVSLLNNKVEEWKGVKFVGSTLWSHIPQQDRYEVSTCINDYRYILDGTGRAITPS-YTSGLHRDAVAFLE----KHCDTNSVVITHHCPQTTRTSHPRYAGSPTNCAFSTDVS---LAQMPQLWVSGHTHFNHDFVKAG-TRFISN 684
            M +Q ASDLHLE    + +   + I+P  D+LI+AGD+     Y +  Q   F R ++  F +V  +PGNHE Y    S+    +D      L    NV LLNN    + GV+F+ STLWSHI Q++ Y V + + D++ +++  G+ + P+ Y+  LH  ++AFL+    K     +VV+THH P   +  HPR+ GS     F+ D+    L   P  W+ GH+H N   ++ G T+ +SN
Sbjct:    1 MIIQYASDLHLEFPANAAHLLANPIEPVGDVLILAGDITSLSYYKSRRQEKTFFRTLANQFRQVYYIPGNHEFYR---SLDARLVDQPFQEALHP--NVFLLNNVACTYGGVRFLFSTLWSHIDQENEYHVGSGMADFQ-LINYHGKRLHPAVYSRDLHGPSLAFLQSELAKPTTIPTVVVTHHLPSL-QCVHPRHVGSSLEQGFANDLDKLILDSQPDYWIYGHSHANRPPIQVGKTQLVSN 236          
BLAST of jgi.p|Trimin1|161970 vs. uniprot
Match: A0A3B7MYA7_9BACT (Metallophosphoesterase n=1 Tax=Paraflavitalea soli TaxID=2315862 RepID=A0A3B7MYA7_9BACT)

HSP 1 Score: 124 bits (311), Expect = 5.570e-31
Identity = 89/245 (36.33%), Postives = 127/245 (51.84%), Query Frame = 1
Query:    1 MQLQLASDLHLEQGCTSNYC----SIIKPAADILIMAGDVA-YATHAQIPPFMRKMSEAFEKVLLVPGNHERYSHDLSMSMTEMDMHLHGVLQEF--SNVSLLNNKVEEWKGVKFVGSTLWSHIPQQDRYEVSTCINDYRYILDGTGRAITPSYTSGLHRDAVAFLEKH---CDTNSVVI-THHCPQTTRTSHP-RYAGSPTNCAFST---DVSLAQMPQLWVSGHTHFNH-DFVKAGTRFISNQ 687
            M +Q  SDLHLE+    NY       I PAAD LI+AGD+  +A   Q P F   +S+ F+    +PGNHE Y  D+        +H  G  +E    NV LLNN+VE+ +G+  V STLWSHI     + ++  + D+R I  G G    P +++ LH++   F+E       T+ +V+ THH P  T  ++P +Y  SP N AF+T   D         W+ GH H N  +F    TR ++NQ
Sbjct:    1 MTIQYCSDLHLER--PENYAWWKKRPILPAADTLILAGDILPFAEMDQFPDFFHYLSDHFQATYWLPGNHEYYGSDI--------LHRSGPFREAIRPNVFLLNNQVEQLEGITLVFSTLWSHISPAAEWTIARYVTDFRAITHG-GERYLPLHSNRLHKECRQFIETAVAAAPTSKIVVATHHIP--TFLNYPAKYKNSPVNEAFATELHDFIYQSSIDTWIFGHHHVNTPEFNVGNTRMLTNQ 232          
BLAST of jgi.p|Trimin1|161970 vs. uniprot
Match: A0A372FDC1_9BACT (Metallophosphoesterase n=1 Tax=Emticicia sp. C21 TaxID=2302915 RepID=A0A372FDC1_9BACT)

HSP 1 Score: 121 bits (304), Expect = 6.780e-30
Identity = 86/246 (34.96%), Postives = 126/246 (51.22%), Query Frame = 1
Query:    1 MQLQLASDLHLEQGCTSNYC--SIIKPAADILIMAGDVAYATHAQIP-----PFMRKMSEAFEKVLLVPGNHERY-SHDLSMSMTEMDMHLHGVLQEF-SNVSLLNNKVEEWKGVKFVGSTLWSHIPQQDRYEVSTCINDYRYILDGTGRAITPSYTSGLHRDAVAFLEKHC----DTNSVVITHHCPQTTRTSHPRYAGSPTNCAFSTDVS---LAQMPQLWVSGHTHFNHDFVKAG-TRFISNQ 687
            M++Q  SDLHLE      Y   + I+P  ++LI+AGD+  A +   P      F + +SE FE+V ++ GNHE Y S D+S+    +       L+E  SNV LLNN+  ++K V F  +TLWS I Q D   +   + D+  I       +   Y   LH+ A+ FL+       +T  VVI+HH P   R  H  + GS    AF+TD+    L   P  WV GH+H N   ++ G T+ ++NQ
Sbjct:    1 MKIQYCSDLHLEMTINKEYLLQNPIEPVGEVLILAGDITNAKYYDDPRPIEKQFFKTLSEQFEQVFIIAGNHEFYRSWDISVLEKPL-------LKEIVSNVFLLNNQTIDYKDVSFFFTTLWSEIHQLDEDYIRRSMPDFSLISYHKKTFLVKHYNE-LHKQALNFLDSSLPQSENTKKVVISHHLPSL-RCVHSDHIGSRLGSAFATDLDKFILKHQPDYWVYGHSHRNRSEIQIGKTKLVTNQ 237          
BLAST of jgi.p|Trimin1|161970 vs. uniprot
Match: A0A1U7PY56_9FLAO (Calcineurin-like phosphoesterase n=3 Tax=Chryseobacterium group TaxID=2782232 RepID=A0A1U7PY56_9FLAO)

HSP 1 Score: 120 bits (300), Expect = 2.350e-29
Identity = 80/240 (33.33%), Postives = 127/240 (52.92%), Query Frame = 1
Query:    1 MQLQLASDLHLEQGCTSNYC--SIIKPAADILIMAGDVA-YATHAQIPPFMRKMSEAFEKVLLVPGNHERYSHDLSMSMTEMDMHLHGVLQEFSNVSLLNNKVEEWKGVKFVGSTLWSHIPQQDRYEVSTCINDYRYILDGTGRAITPSYTSGLHRDAVAFLE----KHCDTNSVVITHHCPQTTRTSHPRYAGSPTNCAFSTDVS-LAQMPQL--WVSGHTHFNHDFVKAG-TRFISNQ 687
            M++Q  SDLHLE      Y   + I P A+IL++AGD+  +A   Q   F   +S+ FE V  +PGNHE Y  D+       +  +        NV LLNNKV+ +   K + STLWS+I  Q+++E+   +ND+R ++   G+A      + L  +   FL+    +      V++THH P T     P+Y GS  N AF+T++S   +  ++  W+ GH H+N +  + G T+ ++NQ
Sbjct:    1 MKIQYCSDLHLEFPENKKYLLENPIIPTAEILVLAGDIIPFAILDQHQEFFDYLSDHFEMVFWIPGNHEYYHSDIHQRTGSFEEKIR------ENVILLNNKVKSFGETKLIFSTLWSYISPQNKFEIQQSLNDFR-LIKNAGKAFDTKAFTNLFLENFNFLKTAIVEEKSFKKVIVTHHVP-TMLNYPPQYKGSVINQAFATELSEFIEENEIDYWLYGHHHYNSEIFEIGKTKLLTNQ 232          
BLAST of jgi.p|Trimin1|161970 vs. uniprot
Match: A0A650DB74_9VIRU (Metallophosphatase n=3 Tax=Moumouvirus TaxID=985782 RepID=A0A650DB74_9VIRU)

HSP 1 Score: 118 bits (296), Expect = 1.750e-28
Identity = 78/257 (30.35%), Postives = 126/257 (49.03%), Query Frame = 1
Query:    7 LQLASDLHLEQGCTSNYCSIIKPAAD-------------ILIMAGDVAYATHAQIPPFMRKMSEAFEKVLLVPGNHERYSHDL--SMSMTEMDMHLHGVLQEFSNVSLLNNKVEEWKGVKFVGSTLWSHIPQQDRYEVSTCINDY----RYILDGTGRAITPSYTSGLHRDAVAFLE---KHCDTNSVVITHHCP------QTTRTSHPRYAGSPTNCAFSTDVS--LAQMPQLWVSGHTHFNHDFVKAGTRFISNQ 687
            L+ ASDLHLE      + +I KP                 L + GD+       +  F+ K+S  +  V  VPGNHE Y+ D   S  + +M   L  +  +F N+  ++N+  + + +KF+GSTLWSHIP +   E++  INDY    +Y +DG    I    T+  +++++ F++   K+ +   +++THH P      +   T+ P Y  SP N AF  D+S  +     LW+ GHTH++  F        +NQ
Sbjct:    4 LRYASDLHLEY-----FDNIYKPKIMELWNFNTCEKDEYYLALVGDIGNPYQKNLELFLEKVSSKYSLVFYVPGNHEYYNLDKKNSRDIEKMKKKLRKICYKFHNIVFMDNESYDLEDIKFIGSTLWSHIPDEKNLEINKSINDYHLIKKYNIDGELEKINCDDTNKWNKESIDFIKQELKNTNKPCIILTHHAPLFSDPEKNHFTADPIYINSPNNFAFHNDLSEIITHPIILWIYGHTHYSGIFHYNNVSICTNQ 255          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|161970 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z861_9STRA8.520e-18197.58Metallo-dependent phosphatase-like protein n=2 Tax... [more]
A0A835Z6I0_9STRA7.590e-9154.22Metallo-dependent phosphatase-like protein n=1 Tax... [more]
A0A835Z038_9STRA9.940e-8651.42Metallo-dependent phosphatase-like protein n=1 Tax... [more]
A0A835YX12_9STRA1.090e-7552.65Metallophos domain-containing protein n=1 Tax=Trib... [more]
A0A1W6E5L5_9BACT2.470e-3436.21Metallophos domain-containing protein n=2 Tax=Fibr... [more]
A0A4Q3PKY6_9BACT1.490e-3234.98Metallophosphoesterase n=1 Tax=Cytophagaceae bacte... [more]
A0A3B7MYA7_9BACT5.570e-3136.33Metallophosphoesterase n=1 Tax=Paraflavitalea soli... [more]
A0A372FDC1_9BACT6.780e-3034.96Metallophosphoesterase n=1 Tax=Emticicia sp. C21 T... [more]
A0A1U7PY56_9FLAO2.350e-2933.33Calcineurin-like phosphoesterase n=3 Tax=Chryseoba... [more]
A0A650DB74_9VIRU1.750e-2830.35Metallophosphatase n=3 Tax=Moumouvirus TaxID=98578... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_18contigContig_18:1139697..1140443 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|161970|e_gw1.18.67.1
DescriptionCalcineurin-like phosphoesterase
COG categoryS
Max annot lvl976|Bacteroidetes
EggNOG OGsCOG1409@1|root,COG1409@2|Bacteria,4NNCZ@976|Bacteroidetes,1IS86@117747|Sphingobacteriia
Evalue7.58e-30
Seed ortholog1122179.KB890425_gene3532
Hectar predicted targeting categoryother localisation
TranscriptId162292
TrackFilteredModels1
ProteinId161970
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|161970gene_1470Tribonema minus UTEX_B_3156 geneContig_18 1139697..1140443 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_1470_1exon_1470_1Tribonema minus UTEX_B_3156 exonContig_18 1139697..1140443 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_1470CDS_1470Tribonema minus UTEX_B_3156 CDSContig_18 1139697..1140443 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|161970Trimin1|161970|e_gw1.18.67.1Tribonema minus UTEX_B_3156 polypeptideContig_18 1139697..1140443 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_1470 ID=mRNA_1470|Name=jgi.p|Trimin1|161970|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=747bp|location=Sequence derived from alignment at Contig_18:1139697..1140443- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCAGCTTCAACTAGCGTCGGATTTGCACCTGGAGCAGGGGTGCACCAG
CAATTATTGCAGCATCATAAAACCTGCGGCTGACATACTCATAATGGCAG
GTGATGTTGCGTATGCGACGCACGCTCAGATACCGCCGTTCATGAGAAAG
ATGTCAGAGGCGTTCGAAAAAGTACTACTGGTGCCAGGTAATCATGAAAG
ATACAGCCATGACCTGAGCATGTCCATGACTGAGATGGATATGCATCTCC
ATGGTGTGCTGCAGGAGTTTTCTAATGTGAGCTTGCTGAACAACAAGGTC
GAAGAGTGGAAAGGCGTCAAATTTGTTGGAAGCACACTATGGTCACACAT
CCCTCAGCAGGACCGATATGAAGTGTCGACATGCATCAATGATTACCGCT
ACATTCTGGATGGAACGGGGAGAGCCATCACCCCATCGTACACCTCTGGT
CTGCACAGAGACGCAGTAGCATTTCTGGAGAAGCACTGCGACACCAACTC
TGTAGTCATTACACACCACTGTCCACAAACAACAAGAACCTCACACCCGA
GGTATGCAGGCTCACCTACCAACTGCGCATTTTCAACAGATGTGTCACTT
GCACAGATGCCGCAGCTGTGGGTGAGTGGACATACACACTTCAACCATGA
CTTTGTGAAGGCGGGCACCAGATTCATTTCAAATCAATATAGAAATGAAA
ATTGGTGTATGCCCTACTCAGCATCGAAAACGGTAACAATCGCATAA
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protein sequence of jgi.p|Trimin1|161970

>Trimin1|161970|e_gw1.18.67.1 ID=Trimin1|161970|e_gw1.18.67.1|Name=jgi.p|Trimin1|161970|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=249bp
MQLQLASDLHLEQGCTSNYCSIIKPAADILIMAGDVAYATHAQIPPFMRK
MSEAFEKVLLVPGNHERYSHDLSMSMTEMDMHLHGVLQEFSNVSLLNNKV
EEWKGVKFVGSTLWSHIPQQDRYEVSTCINDYRYILDGTGRAITPSYTSG
LHRDAVAFLEKHCDTNSVVITHHCPQTTRTSHPRYAGSPTNCAFSTDVSL
AQMPQLWVSGHTHFNHDFVKAGTRFISNQYRNENWCMPYSASKTVTIA*
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mRNA from alignment at Contig_18:1139697..1140443-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_1470 ID=mRNA_1470|Name=jgi.p|Trimin1|161970|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=747bp|location=Sequence derived from alignment at Contig_18:1139697..1140443- (Tribonema minus UTEX_B_3156 )
ATGCAGCTTCAACTAGCGTCGGATTTGCACCTGGAGCAGGGGTGCACCAG CAATTATTGCAGCATCATAAAACCTGCGGCTGACATACTCATAATGGCAG GTGATGTTGCGTATGCGACGCACGCTCAGATACCGCCGTTCATGAGAAAG ATGTCAGAGGCGTTCGAAAAAGTACTACTGGTGCCAGGTAATCATGAAAG ATACAGCCATGACCTGAGCATGTCCATGACTGAGATGGATATGCATCTCC ATGGTGTGCTGCAGGAGTTTTCTAATGTGAGCTTGCTGAACAACAAGGTC GAAGAGTGGAAAGGCGTCAAATTTGTTGGAAGCACACTATGGTCACACAT CCCTCAGCAGGACCGATATGAAGTGTCGACATGCATCAATGATTACCGCT ACATTCTGGATGGAACGGGGAGAGCCATCACCCCATCGTACACCTCTGGT CTGCACAGAGACGCAGTAGCATTTCTGGAGAAGCACTGCGACACCAACTC TGTAGTCATTACACACCACTGTCCACAAACAACAAGAACCTCACACCCGA GGTATGCAGGCTCACCTACCAACTGCGCATTTTCAACAGATGTGTCACTT GCACAGATGCCGCAGCTGTGGGTGAGTGGACATACACACTTCAACCATGA CTTTGTGAAGGCGGGCACCAGATTCATTTCAAATCAATATAGAAATGAAA ATTGGTGTATGCCCTACTCAGCATCGAAAACGGTAACAATCGCATAA
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Coding sequence (CDS) from alignment at Contig_18:1139697..1140443-

>mRNA_1470 ID=mRNA_1470|Name=jgi.p|Trimin1|161970|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=747bp|location=Sequence derived from alignment at Contig_18:1139697..1140443- (Tribonema minus UTEX_B_3156 )
ATGCAGCTTCAACTAGCGTCGGATTTGCACCTGGAGCAGGGGTGCACCAG
CAATTATTGCAGCATCATAAAACCTGCGGCTGACATACTCATAATGGCAG
GTGATGTTGCGTATGCGACGCACGCTCAGATACCGCCGTTCATGAGAAAG
ATGTCAGAGGCGTTCGAAAAAGTACTACTGGTGCCAGGTAATCATGAAAG
ATACAGCCATGACCTGAGCATGTCCATGACTGAGATGGATATGCATCTCC
ATGGTGTGCTGCAGGAGTTTTCTAATGTGAGCTTGCTGAACAACAAGGTC
GAAGAGTGGAAAGGCGTCAAATTTGTTGGAAGCACACTATGGTCACACAT
CCCTCAGCAGGACCGATATGAAGTGTCGACATGCATCAATGATTACCGCT
ACATTCTGGATGGAACGGGGAGAGCCATCACCCCATCGTACACCTCTGGT
CTGCACAGAGACGCAGTAGCATTTCTGGAGAAGCACTGCGACACCAACTC
TGTAGTCATTACACACCACTGTCCACAAACAACAAGAACCTCACACCCGA
GGTATGCAGGCTCACCTACCAACTGCGCATTTTCAACAGATGTGTCACTT
GCACAGATGCCGCAGCTGTGGGTGAGTGGACATACACACTTCAACCATGA
CTTTGTGAAGGCGGGCACCAGATTCATTTCAAATCAATATAGAAATGAAA
ATTGGTGTATGCCCTACTCAGCATCGAAAACGGTAACAATCGCATAA
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