mRNA_14666 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|351635
Unique NamemRNA_14666
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|351635 vs. uniprot
Match: A0A835YHB0_9STRA (NAD(P)-bd_dom domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHB0_9STRA)

HSP 1 Score: 796 bits (2057), Expect = 1.140e-289
Identity = 405/405 (100.00%), Postives = 405/405 (100.00%), Query Frame = 3
Query:  240 MVGFDSSMLTASLSAVSNNSDPIEDVYVSDSMGSEDSICTPDTLSEAGDDDAGMFEDPKLVLVTGGAGFVGSSVADALLARGDDVIIVDEVNDYYDTTIKRSNLASLVSRYGSERCKVYEGDICDVPFITAIFEEHKPEWIVHMAARAGVRPSIQDPFIYVHSNIEGTTRLLELARQHGCKSFAFASSSSVYGGSDKSLFSETDLVDHPVSPYAASKKACELLAHTYHHLYNLNIAALRFFTVYGPRGRPDMAPFKFIDAVARGREMQQFGDGSTSRDYTYITDIVDGVLRALDTPLGYQIYNLGRGEPTRLSRFINLVEANVGRKAIIRVCPEQPGDVPRTCADISKARRLLGYDPKVSFEDGIAATVAWYKATYMQPQQQTDAAATKVAAAAPAASVSANMVM 1454
            MVGFDSSMLTASLSAVSNNSDPIEDVYVSDSMGSEDSICTPDTLSEAGDDDAGMFEDPKLVLVTGGAGFVGSSVADALLARGDDVIIVDEVNDYYDTTIKRSNLASLVSRYGSERCKVYEGDICDVPFITAIFEEHKPEWIVHMAARAGVRPSIQDPFIYVHSNIEGTTRLLELARQHGCKSFAFASSSSVYGGSDKSLFSETDLVDHPVSPYAASKKACELLAHTYHHLYNLNIAALRFFTVYGPRGRPDMAPFKFIDAVARGREMQQFGDGSTSRDYTYITDIVDGVLRALDTPLGYQIYNLGRGEPTRLSRFINLVEANVGRKAIIRVCPEQPGDVPRTCADISKARRLLGYDPKVSFEDGIAATVAWYKATYMQPQQQTDAAATKVAAAAPAASVSANMVM
Sbjct:    1 MVGFDSSMLTASLSAVSNNSDPIEDVYVSDSMGSEDSICTPDTLSEAGDDDAGMFEDPKLVLVTGGAGFVGSSVADALLARGDDVIIVDEVNDYYDTTIKRSNLASLVSRYGSERCKVYEGDICDVPFITAIFEEHKPEWIVHMAARAGVRPSIQDPFIYVHSNIEGTTRLLELARQHGCKSFAFASSSSVYGGSDKSLFSETDLVDHPVSPYAASKKACELLAHTYHHLYNLNIAALRFFTVYGPRGRPDMAPFKFIDAVARGREMQQFGDGSTSRDYTYITDIVDGVLRALDTPLGYQIYNLGRGEPTRLSRFINLVEANVGRKAIIRVCPEQPGDVPRTCADISKARRLLGYDPKVSFEDGIAATVAWYKATYMQPQQQTDAAATKVAAAAPAASVSANMVM 405          
BLAST of jgi.p|Trimin1|351635 vs. uniprot
Match: A0A835Z3G0_9STRA (NAD(P)-bd_dom domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3G0_9STRA)

HSP 1 Score: 525 bits (1353), Expect = 4.480e-181
Identity = 268/382 (70.16%), Postives = 306/382 (80.10%), Query Frame = 3
Query:  276 LSAVSNNSDPIEDVYVSDSMGS---------EDSICTPDTLSEAGDDDAGMFEDPKLVLVTGGAGFVGSSVADALLARGDDVIIVDEVNDYYDTTIKRSNLASLVSRYGSERCKVYEGDICDVPFITAIFEEHKPEWIVHMAARAGVRPSIQDPFIYVHSNIEGTTRLLELARQHGCKSFAFASSSSVYGGSDKSLFSETDLVDHPVSPYAASKKACELLAHTYHHLYNLNIAALRFFTVYGPRGRPDMAPFKFIDAVARGREMQQFGDGSTSRDYTYITDIVDGVLRALDTPLGYQIYNLGRGEPTRLSRFINLVEANVGRKAIIRVCPEQPGDVPRTCADISKARRLLGYDPKVSFEDGIAATVAWYKATYMQ----PQQ 1382
            L  +  +SDP    Y SDSM S          D    P   +EA   D+G     K VLVTGGAGFVG +VA+ALLARGDDV+IVDEVNDYYD  +KR++LA+LV+RYG+ R +++EGD+ D  F+ A+F  H P+WIVHMAARAGVRPSIQDPF+YVHSN+ GTTRLLELA +HGC+SFAFASSSSVYG     +FSE D VD PVSPYAA+KKACEL+AHTY HLY LN+AALRFFTVYGPRGRPDMAP+KFI AV  GRE+QQ+GDGSTSRDYTYI DIVDGV+RALD PLGYQ+YNLGRGEPTRLSRFI +VE  VGR A+IRVCPEQPGDVPRTCADISKARRLLGY+P+VSFE+GIA TVAWYK TYM     PQQ
Sbjct:   78 LHEIDTSSDP---AYASDSMASTLSPGSTASSDDSGEPAAFAEATPADSGH----KTVLVTGGAGFVGGAVAEALLARGDDVLIVDEVNDYYDVRVKRASLAALVARYGAARVRIFEGDVADAAFMGALFAAHAPQWIVHMAARAGVRPSIQDPFVYVHSNVLGTTRLLELAARHGCRSFAFASSSSVYGEGAAEVFSEDDAVDAPVSPYAATKKACELMAHTYAHLYGLNVAALRFFTVYGPRGRPDMAPYKFIAAVCAGREIQQYGDGSTSRDYTYIEDIVDGVVRALDRPLGYQVYNLGRGEPTRLSRFIGIVERCVGRAAVIRVCPEQPGDVPRTCADISKARRLLGYEPRVSFEEGIARTVAWYKETYMAEEGLPQQ 452          
BLAST of jgi.p|Trimin1|351635 vs. uniprot
Match: A0A6H5L121_9PHAE (NAD(P)-bd_dom domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L121_9PHAE)

HSP 1 Score: 493 bits (1268), Expect = 3.380e-168
Identity = 246/350 (70.29%), Postives = 277/350 (79.14%), Query Frame = 3
Query:  330 SMGSEDSIC--TPDTLSEAGDDDAGMFEDP-----KLVLVTGGAGFVGSSVADALLARGDDVIIVDEVNDYYDTTIKRSNLASLVSRYGSERCKVYEGDICDVPFITAIFEEHKPEWIVHMAARAGVRPSIQDPFIYVHSNIEGTTRLLELARQHGCKSFAFASSSSVYGGSDKSLFSETDLVDHPVSPYAASKKACELLAHTYHHLYNLNIAALRFFTVYGPRGRPDMAPFKFIDAVARGREMQQFGDGSTSRDYTYITDIVDGVLRALDTPLGYQIYNLGRGEPTRLSRFINLVEANVGRKAIIRVCPEQPGDVPRTCADISKARRLLGYDPKVSFEDGIAATVAWYK 1358
            S G  +S+   +PD L     DD    E P     K VLVTG AGF+GS VAD LLARGDDV+IVDEVN YYD   KRSN+A L+ +YG  R K +EGD+CD PFIT IFE    EW+VHMAARAGVRPSI+DPF+YVHSN+E TTRLLEL+R HG KSF FASSSSVYGGS K +FSE D+VD PVSPYAA+KK+CEL+AHTY HLY LNIA LRFFTVYGPRGRPDMAP+KFID VARG+E+ QFGDGSTSRDYTYI+DIVDGV+R+LD P GYQIYNLG G P  LS FI LVE +VG  A IRVCPEQPGDVPRTCADISKAR +LGY+P V+F DGI  TV WY+
Sbjct:   53 SCGDSESVIGSSPDDLDYIPTDDGFATEVPPHTGKKTVLVTGAAGFIGSWVADTLLARGDDVVIVDEVNSYYDVRTKRSNIAMLLEKYGPNRVKFFEGDLCDAPFITRIFETEGVEWVVHMAARAGVRPSIEDPFVYVHSNVEATTRLLELSRLHGVKSFVFASSSSVYGGSQKEVFSEKDVVDFPVSPYAATKKSCELMAHTYSHLYGLNIAGLRFFTVYGPRGRPDMAPYKFIDLVARGQEIMQFGDGSTSRDYTYISDIVDGVVRSLDRPAGYQIYNLGNGSPVSLSSFIKLVEKSVGTPAKIRVCPEQPGDVPRTCADISKARAMLGYNPSVAFADGIGKTVDWYQ 402          
BLAST of jgi.p|Trimin1|351635 vs. uniprot
Match: B7FWH2_PHATC (Nad-dependent epimerase/dehydratase n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FWH2_PHATC)

HSP 1 Score: 466 bits (1200), Expect = 1.750e-159
Identity = 222/324 (68.52%), Postives = 267/324 (82.41%), Query Frame = 3
Query:  414 KLVLVTGGAGFVGSSVADALLARGDDVIIVDEVNDYYDTTIKRSNLASLVSRYGSERCKVYEGDICDVPFITAIFEEHKPEWIVHMAARAGVRPSIQDPFIYVHSNIEGTTRLLELARQHGCKSFAFASSSSVYGGSDKSLFSETDLVDHPVSPYAASKKACELLAHTYHHLYNLNIAALRFFTVYGPRGRPDMAPFKFIDAVARGREMQQFGDGSTSRDYTYITDIVDGVLRALDTPLGYQIYNLGRGEPTRLSRFINLVEANVGRKAIIRVCPEQPGDVPRTCADISKARRLLGYDPKVSFEDGIAATVAWYKATYMQPQQQ 1385
            K VLVTGGAGF+GS VAD LL RGDDV+I+DE+NDYY   IK+SNL  L S+YG++R K+Y GD+CD   +T IFE   P W+ HMAARAGVRPSIQDP++Y+HSNI+GTTRL+EL+ ++G ++F FASSSSVYGGS  + FSE ++VD+PVSPYAASKKACELLA+TYHHLYNLN   LRFFTVYGPRGRPDMAPFKFID V+RG E+QQFGDGS+SRDYTYI+DIVDGV+RA+D P  YQI+NLG+G  T L  FI+LV+ +VG+KA I++ P+QPGDVP TCAD+SKA RLLGY+ +VSFEDGI  T  WYK  Y   Q Q
Sbjct:   47 KKVLVTGGAGFIGSHVADVLLERGDDVVIIDEMNDYYSLDIKQSNLKLLQSKYGNDRLKIYFGDVCDEELVTNIFETEHPTWVCHMAARAGVRPSIQDPYVYIHSNIKGTTRLMELSAKYGVQNFVFASSSSVYGGSKSTFFSEDEVVDNPVSPYAASKKACELLAYTYHHLYNLNTTGLRFFTVYGPRGRPDMAPFKFIDRVSRGVEIQQFGDGSSSRDYTYISDIVDGVVRAIDRPYRYQIFNLGKGSGTSLREFIDLVQKHVGQKAKIKILPDQPGDVPYTCADVSKAARLLGYESEVSFEDGIRLTAEWYKDAYAHRQLQ 370          
BLAST of jgi.p|Trimin1|351635 vs. uniprot
Match: A0A6U0H8I3_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A6U0H8I3_9STRA)

HSP 1 Score: 468 bits (1204), Expect = 2.140e-159
Identity = 220/318 (69.18%), Postives = 263/318 (82.70%), Query Frame = 3
Query:  414 KLVLVTGGAGFVGSSVADALLARGDDVIIVDEVNDYYDTTIKRSNLASLVSRYGSERCKVYEGDICDVPFITAIFEEHKPEWIVHMAARAGVRPSIQDPFIYVHSNIEGTTRLLELARQHGCKSFAFASSSSVYGGSDKSLFSETDLVDHPVSPYAASKKACELLAHTYHHLYNLNIAALRFFTVYGPRGRPDMAPFKFIDAVARGREMQQFGDGSTSRDYTYITDIVDGVLRALDTPLGYQIYNLGRGEPTRLSRFINLVEANVGRKAIIRVCPEQPGDVPRTCADISKARRLLGYDPKVSFEDGIAATVAWYKATY 1367
            K VLVTGGAGF+GS V++ LL RGDDV+I+DEVNDYYDT IK SNL  L+ +YG ER K+Y GDIC+V  IT IFEEHKPEW+ HMAARAGVRPSIQDP+IY+HSNIEGTTRL+EL+ +HG K+F FASSSSVYGGS  + FSE++ VDHP+SPYAASKK+CEL+++TYHHLY LN+  LRFFTV+GPRGRPDMAPF FID V+RG  +QQ+GDGS+SRDYTYI+DIVDGV+RA+D P  YQ++NLG+G  T L  FI LV    G++ II   P+QPGDVP TCAD+SKA+RLLGY  KV+FE+GI  TVAWY   Y
Sbjct:   83 KKVLVTGGAGFIGSHVSEYLLNRGDDVVIIDEVNDYYDTRIKESNLQMLLDKYGEERVKIYRGDICNVDLITKIFEEHKPEWVCHMAARAGVRPSIQDPYIYIHSNIEGTTRLMELSHKHGVKNFVFASSSSVYGGSKSTFFSESENVDHPISPYAASKKSCELMSYTYHHLYKLNVTGLRFFTVFGPRGRPDMAPFIFIDRVSRGVAIQQYGDGSSSRDYTYISDIVDGVVRAVDRPYPYQVFNLGKGSGTSLKEFIGLVGKTTGKEVIIDQMPDQPGDVPYTCADVSKAQRLLGYKAKVTFEEGIKKTVAWYNEAY 400          
BLAST of jgi.p|Trimin1|351635 vs. uniprot
Match: A0A7S4RAP2_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RAP2_9STRA)

HSP 1 Score: 465 bits (1197), Expect = 1.060e-157
Identity = 221/318 (69.50%), Postives = 264/318 (83.02%), Query Frame = 3
Query:  414 KLVLVTGGAGFVGSSVADALLARGDDVIIVDEVNDYYDTTIKRSNLASLVSRYGSERCKVYEGDICDVPFITAIFEEHKPEWIVHMAARAGVRPSIQDPFIYVHSNIEGTTRLLELARQHGCKSFAFASSSSVYGGSDKSLFSETDLVDHPVSPYAASKKACELLAHTYHHLYNLNIAALRFFTVYGPRGRPDMAPFKFIDAVARGREMQQFGDGSTSRDYTYITDIVDGVLRALDTPLGYQIYNLGRGEPTRLSRFINLVEANVGRKAIIRVCPEQPGDVPRTCADISKARRLLGYDPKVSFEDGIAATVAWYKATY 1367
            K VL+TGGAGF+GS VA+ LL RGDDV+IVDE+NDYYD  IK SNL+ L+  YG ER  ++ GD+CD  F+  +FEE +PEW+ HMAARAGVRPSIQDPF+Y+HSNI+GTTRL+EL+ Q+G ++F FASSSSVYGGS  + FSE + VD+PVSPYAA+KKACELLA+TYHHLY LNI+ALRFFTVYGPRGRPDMAPFKFID V+RG E+QQFGDGS+SRDYTYITDIVDGV+RA+D P  Y+IYNLG+G+ T L  FI+LVE   G+KAIIR  P+Q GDVP TCAD+SKA  LLGY  K+SFE+GI  T  WY+A Y
Sbjct:  140 KKVLITGGAGFIGSHVAECLLERGDDVVIVDEMNDYYDVRIKESNLSLLLDMYGKERVSIHRGDMCDEAFMQRVFEETRPEWVCHMAARAGVRPSIQDPFVYIHSNIKGTTRLMELSHQYGVQNFVFASSSSVYGGSKSTFFSEDESVDNPVSPYAATKKACELLAYTYHHLYKLNISALRFFTVYGPRGRPDMAPFKFIDRVSRGLEIQQFGDGSSSRDYTYITDIVDGVVRAIDRPYPYEIYNLGKGDGTSLKEFISLVEKYTGKKAIIRQLPDQAGDVPYTCADVSKADCLLGYRAKISFEEGIRRTAEWYRAAY 457          
BLAST of jgi.p|Trimin1|351635 vs. uniprot
Match: A0A7S0UIK5_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UIK5_9STRA)

HSP 1 Score: 459 bits (1182), Expect = 7.880e-157
Identity = 231/373 (61.93%), Postives = 282/373 (75.60%), Query Frame = 3
Query:  321 VSDSMGSEDSICTPDTLSEAGDDDAGMFEDPKLVLVTGGAGFVGSSVADALLARGDDVIIVDEVNDYYDTTIKRSNLASLVSRYGSE-RCKVYEGDICDVPFITAIFEEHKPEWIVHMAARAGVRPSIQDPFIYVHSNIEGTTRLLELARQHGCKSFAFASSSSVYGGSDKSLFSETDLVDHPVSPYAASKKACELLAHTYHHLYNLNIAALRFFTVYGPRGRPDMAPFKFIDAVARGREMQQFGDGSTSRDYTYITDIVDGVLRALDTPLGYQIYNLGRGEPTRLSRFINLVEANVGRKAIIRVCPEQPGDVPRTCADISKARRLLGYDPKVSFEDGIAATVAWYKATYMQPQQQTDAAATKVAAAAPAASV 1436
            V+ S+GS D   +  T S    D        K VLVTGGAGF+GS VA+ LLARGDDV+I+DE+NDYYD +IK SNL  L   Y  E R KVY GDICD   + +IFE    +W+ HMAARAGVRPSIQDPF+Y+HSNI  TT L+EL+ +HG ++F FASSSSVYGGS  + FSE ++VDHPVSPYAASKK CELLA+TYHHLY LN+  LRFFTVYGPRGRPDMAPFKF D + RG EMQQ+GDGS+SRDYTYI+DIVDGV+RA+D P  YQI+NLG+G+ T L +FINLV+ NVG+KAII+V P+QPGDVP TCAD++KA+ LLGY+ K++FEDGI  TV WY   Y + ++  +   T +   APA S+
Sbjct:   19 VASSIGSSDISESGSTASWTDTDILEPHVGYKKVLVTGGAGFIGSHVAEYLLARGDDVVIIDEMNDYYDVSIKESNLKLLQETYPEEGRVKVYRGDICDRKLLESIFETENIKWVCHMAARAGVRPSIQDPFVYIHSNITATTHLMELSHKHGIENFVFASSSSVYGGSKSTFFSEDEVVDHPVSPYAASKKTCELLAYTYHHLYKLNVTGLRFFTVYGPRGRPDMAPFKFTDRIYRGVEMQQYGDGSSSRDYTYISDIVDGVVRAIDRPYDYQIFNLGKGDGTSLKKFINLVQENVGKKAIIKVLPDQPGDVPYTCADVAKAKHLLGYNSKIAFEDGIKRTVDWYVTKYARSKETKEIKKT-INFVAPATSI 390          
BLAST of jgi.p|Trimin1|351635 vs. uniprot
Match: A0A7S1ZRD9_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZRD9_TRICV)

HSP 1 Score: 456 bits (1174), Expect = 1.700e-155
Identity = 214/318 (67.30%), Postives = 260/318 (81.76%), Query Frame = 3
Query:  414 KLVLVTGGAGFVGSSVADALLARGDDVIIVDEVNDYYDTTIKRSNLASLVSRYGSERCKVYEGDICDVPFITAIFEEHKPEWIVHMAARAGVRPSIQDPFIYVHSNIEGTTRLLELARQHGCKSFAFASSSSVYGGSDKSLFSETDLVDHPVSPYAASKKACELLAHTYHHLYNLNIAALRFFTVYGPRGRPDMAPFKFIDAVARGREMQQFGDGSTSRDYTYITDIVDGVLRALDTPLGYQIYNLGRGEPTRLSRFINLVEANVGRKAIIRVCPEQPGDVPRTCADISKARRLLGYDPKVSFEDGIAATVAWYKATY 1367
            K VLVTGGAGF+GS VAD LL RGDDV+IVDE+NDYYD  +K SNL  L+ +YG ER  +Y GDICD  F+  +FE  +PEW+ HMAARAGVRPSIQDP++Y+HSNI GTT+L+EL+ + G K+F FASSSSVYGGS  + FSE + VD+PVSPYAASKKACELLA+TYHHLY LN++ALRFFTVYGPRGRPDMAPFKFID ++RG E+QQFGDGS+SRDYTYI+DIVDG++RA+D P  Y+I+NLG+G  T L  FIN+VE + G+ A IR  P+QPGDVP TCAD+ KA+RLLGY  KVSF++GI  T  WY+  +
Sbjct:   53 KKVLVTGGAGFIGSHVADYLLERGDDVVIVDEINDYYDVKVKESNLDLLLKKYGKERVSIYVGDICDEEFMLRVFEAKRPEWVCHMAARAGVRPSIQDPYVYIHSNIRGTTQLMELSHKFGVKNFVFASSSSVYGGSKSTYFSEDESVDNPVSPYAASKKACELLAYTYHHLYKLNVSALRFFTVYGPRGRPDMAPFKFIDRISRGMEIQQFGDGSSSRDYTYISDIVDGIVRAIDRPHPYEIFNLGKGSGTSLKEFINIVEKHTGKAAKIRQLPDQPGDVPYTCADVCKAQRLLGYRAKVSFDEGIRRTAKWYQEAF 370          
BLAST of jgi.p|Trimin1|351635 vs. uniprot
Match: A0A6U1AQP1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U1AQP1_9STRA)

HSP 1 Score: 455 bits (1170), Expect = 2.860e-155
Identity = 216/326 (66.26%), Postives = 262/326 (80.37%), Query Frame = 3
Query:  414 KLVLVTGGAGFVGSSVADALLARGDDVIIVDEVNDYYDTTIKRSNLASLVSRYGSERCKVYEGDICDVPFITAIFEEHKPEWIVHMAARAGVRPSIQDPFIYVHSNIEGTTRLLELARQHGCKSFAFASSSSVYGGSDKSLFSETDLVDHPVSPYAASKKACELLAHTYHHLYNLNIAALRFFTVYGPRGRPDMAPFKFIDAVARGREMQQFGDGSTSRDYTYITDIVDGVLRALDTPLGYQIYNLGRGEPTRLSRFINLVEANVGRKAIIRVCPEQPGDVPRTCADISKARRLLGYDPKVSFEDGIAATVAWYKATYMQPQQQTD 1391
            K VLVTG AGF+GS VA+ LLARGD VI VDEVNDYYD  IKR+N+ +L +R+  ++   YEGD+CD  FI  IFE  +P W+VH+AARAGVRPSIQDPF+Y+ SN+  TTRLLELAR +G + F FASSSSVYGGS +SLFSETD+VD+PVSPYAA+KK+CEL+ +TYHHLY L++A LRFFTVYGPRGRPDMAPFKF+D V RG E+QQ+GDGS+SRDYTYI DIVDGV+R+LD PLGYQIYNLG G P  L  FI +VE + G+KA IR+ P+QPGDVPRT A+I+KAR+LLGY+PKV F +GI   V WY   Y    ++ +
Sbjct:   25 KTVLVTGAAGFIGSHVAEVLLARGDRVIAVDEVNDYYDVRIKRANIQALATRFSVDQFCFYEGDLCDEAFIGQIFERERPRWVVHLAARAGVRPSIQDPFVYIQSNVVATTRLLELARTYGNEHFVFASSSSVYGGSKQSLFSETDVVDYPVSPYAATKKSCELMGYTYHHLYGLHVAGLRFFTVYGPRGRPDMAPFKFVDRVVRGAEIQQYGDGSSSRDYTYIDDIVDGVVRSLDRPLGYQIYNLGNGNPVGLRDFIRIVEESTGKKATIRILPDQPGDVPRTAANINKARQLLGYEPKVPFREGIERLVKWYTTEYQTMAEEPE 350          
BLAST of jgi.p|Trimin1|351635 vs. uniprot
Match: A0A7S4AJT5_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AJT5_9STRA)

HSP 1 Score: 455 bits (1171), Expect = 5.550e-155
Identity = 235/379 (62.01%), Postives = 281/379 (74.14%), Query Frame = 3
Query:  249 FDSSMLTASLSAVSNNSDPIEDVYVSDSMGSEDSICTPDTLSEAGDD--DAGMFEDP---KLVLVTGGAGFVGSSVADALLARGDDVIIVDEVNDYYDTTIKRSNLASLVSRYGSE-RCKVYEGDICDVPFITAIFEEHKPEWIVHMAARAGVRPSIQDPFIYVHSNIEGTTRLLELARQHGCKSFAFASSSSVYGGSDKSLFSETDLVDHPVSPYAASKKACELLAHTYHHLYNLNIAALRFFTVYGPRGRPDMAPFKFIDAVARGREMQQFGDGSTSRDYTYITDIVDGVLRALDTPLGYQIYNLGRGEPTRLSRFINLVEANVGRKAIIRVCPEQPGDVPRTCADISKARRLLGYDPKVSFEDGIAATVAWYKATY 1367
             D+S +T + + V +NSD      VS   GS  S       SE+G+   D  + E     K VLVTGGAGF+GS VA+ LLARGDDV+I+DE+NDYYD  IK SNL  L   Y  E R  +Y GDICD   +++IFE    +W+ HMAARAGVRPSIQDPFIYVHSNI  TT L+EL+ +HG ++F FASSSSVYGGS  + FSE ++VDHPVSPYAA+KKACELL +TYHHLY L +  LRFFTVYGPRGRPDMAPFKF D + RG EMQQFGDGS+SRDYTYI DIVDGV+RA+D P  YQI+NLG+G  T L +FINLV+  VG+KAII+V P+QPGDVP TCAD++KA+ LLGY  KV+FEDGI  TV WYK +Y
Sbjct:    1 MDASNITKNNAVVDDNSDSA--TVVSSIGGSFPSSPASSVSSESGNSWMDTELVEPHVGYKKVLVTGGAGFIGSHVAEVLLARGDDVVIIDEINDYYDVNIKESNLKLLKDTYPEEGRVTIYRGDICDRQLLSSIFETENIKWVCHMAARAGVRPSIQDPFIYVHSNINATTHLMELSNKHGIENFVFASSSSVYGGSKSTFFSEEEVVDHPVSPYAATKKACELLGYTYHHLYQLKVTGLRFFTVYGPRGRPDMAPFKFTDRIYRGVEMQQFGDGSSSRDYTYIDDIVDGVVRAIDRPYDYQIFNLGKGAGTSLKKFINLVQKYVGKKAIIKVLPDQPGDVPYTCADVAKAKHLLGYTSKVAFEDGIKRTVDWYKRSY 377          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351635 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YHB0_9STRA1.140e-289100.00NAD(P)-bd_dom domain-containing protein n=1 Tax=Tr... [more]
A0A835Z3G0_9STRA4.480e-18170.16NAD(P)-bd_dom domain-containing protein n=1 Tax=Tr... [more]
A0A6H5L121_9PHAE3.380e-16870.29NAD(P)-bd_dom domain-containing protein n=2 Tax=Ec... [more]
B7FWH2_PHATC1.750e-15968.52Nad-dependent epimerase/dehydratase n=3 Tax=Phaeod... [more]
A0A6U0H8I3_9STRA2.140e-15969.18Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S4RAP2_9STRA1.060e-15769.50Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]
A0A7S0UIK5_9STRA7.880e-15761.93Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]
A0A7S1ZRD9_TRICV1.700e-15567.30Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A6U1AQP1_9STRA2.860e-15566.26Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S4AJT5_9STRA5.550e-15562.01Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_95contigContig_95:352832..354455 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|351635|estExt_Genemark1.C_Ctg_950047
BRITEko00000,ko00001,ko01000
KEGG rclassRC00289
KEGG ReactionR01385
KEGG Pathwayko00520,ko01100,map00520,map01100
KEGG koko:K08679
EC5.1.3.6
Descriptionracemase and epimerase activity, acting on carbohydrates and derivatives
COG categoryM
Max annot lvl2759|Eukaryota
EggNOG OGsCOG1087@1|root,KOG1371@2759|Eukaryota
Evalue7.15e-169
Seed ortholog2880.D7FK24
Hectar predicted targeting categoryother localisation
TranscriptId351957
TrackFilteredModels1
ProteinId351635
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351635gene_14666Tribonema minus UTEX_B_3156 geneContig_95 352832..354455 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_14666_1exon_14666_1Tribonema minus UTEX_B_3156 exonContig_95 352832..352966 +
exon_14666_2exon_14666_2Tribonema minus UTEX_B_3156 exonContig_95 353134..354455 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_14666UTR5_14666Tribonema minus UTEX_B_3156 five_prime_UTRContig_95 352832..352966 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_14666CDS_14666Tribonema minus UTEX_B_3156 CDSContig_95 353238..354455 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351635Trimin1|351635|estExt_Genemark1.C_Ctg_950047Tribonema minus UTEX_B_3156 polypeptideContig_95 353238..354455 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_14666 ID=mRNA_14666|Name=jgi.p|Trimin1|351635|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1457bp|location=Sequence derived from alignment at Contig_95:352832..354455+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CACACACGACACACAAAAGCCAGACAGCACCAGCAGCAGGCAGGATAGCA
AGGCTGGGGCTTCGAGCGAAGCTCCATTGACGACTGGCACGATTCCCTAC
ACGCCCCACTTCCGGCATAGTCAGGTCAAGGGAGGAACCACGTGCTGAAT
CAGCGTCAGCCCAAACAGGCATTCCTTGGCTCCAGCACACCAGCAACACC
TTAGCAACTAGTCCAACCGGCGTTCAAAACAGCAGCACCATGGTTGGCTT
CGACAGCTCCATGCTCACCGCCAGCCTTAGCGCCGTCAGCAACAACAGCG
ACCCCATCGAGGACGTGTATGTCTCGGACAGCATGGGGTCGGAAGACTCC
ATCTGCACTCCAGACACGCTCTCGGAGGCCGGCGACGATGACGCTGGCAT
GTTCGAGGACCCCAAGCTCGTCCTGGTCACAGGCGGCGCAGGGTTCGTCG
GCAGCAGCGTCGCGGACGCCCTGCTCGCTCGTGGCGACGATGTCATCATC
GTTGACGAGGTCAACGACTACTACGACACCACCATCAAGCGCAGCAACCT
GGCCTCCCTCGTCTCGCGCTACGGCAGCGAGAGGTGCAAGGTGTACGAGG
GCGACATCTGCGACGTACCCTTCATCACCGCCATTTTTGAGGAGCACAAG
CCCGAGTGGATCGTCCACATGGCGGCCCGGGCTGGCGTGCGCCCCTCCAT
TCAGGACCCCTTCATCTACGTCCACAGCAACATCGAGGGCACCACGAGGC
TGCTGGAGCTGGCGCGCCAGCACGGCTGCAAGTCCTTTGCCTTCGCCAGC
AGCAGCTCCGTGTACGGCGGCAGCGACAAGTCCCTCTTCAGCGAGACGGA
CCTGGTAGACCACCCCGTGAGCCCGTACGCGGCCTCCAAGAAGGCGTGCG
AGCTGCTGGCGCACACGTACCACCACCTCTACAACCTCAACATTGCGGCG
CTGCGCTTCTTCACGGTGTACGGCCCGCGCGGCCGCCCCGACATGGCGCC
CTTCAAGTTCATCGACGCCGTCGCGCGCGGCCGCGAGATGCAGCAGTTCG
GCGATGGCTCCACGTCGCGCGACTACACGTACATCACGGATATCGTTGAC
GGCGTTCTGCGCGCGCTCGACACGCCCCTCGGCTACCAGATCTACAACCT
AGGCCGCGGCGAGCCGACGCGCCTGTCGCGCTTCATCAACCTCGTCGAGG
CGAACGTCGGGCGCAAGGCGATCATCCGCGTGTGCCCGGAGCAGCCGGGG
GACGTGCCGCGCACATGCGCGGACATCTCCAAGGCGCGCCGCCTCCTCGG
CTACGACCCCAAGGTGTCGTTTGAGGACGGCATCGCGGCGACTGTCGCCT
GGTACAAGGCGACGTACATGCAGCCGCAGCAGCAGACAGACGCTGCTGCA
ACGAAAGTGGCCGCAGCCGCCCCCGCCGCTTCCGTCTCCGCCAACATGGT
AATGTGA
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protein sequence of jgi.p|Trimin1|351635

>Trimin1|351635|estExt_Genemark1.C_Ctg_950047 ID=Trimin1|351635|estExt_Genemark1.C_Ctg_950047|Name=jgi.p|Trimin1|351635|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=406bp
MVGFDSSMLTASLSAVSNNSDPIEDVYVSDSMGSEDSICTPDTLSEAGDD
DAGMFEDPKLVLVTGGAGFVGSSVADALLARGDDVIIVDEVNDYYDTTIK
RSNLASLVSRYGSERCKVYEGDICDVPFITAIFEEHKPEWIVHMAARAGV
RPSIQDPFIYVHSNIEGTTRLLELARQHGCKSFAFASSSSVYGGSDKSLF
SETDLVDHPVSPYAASKKACELLAHTYHHLYNLNIAALRFFTVYGPRGRP
DMAPFKFIDAVARGREMQQFGDGSTSRDYTYITDIVDGVLRALDTPLGYQ
IYNLGRGEPTRLSRFINLVEANVGRKAIIRVCPEQPGDVPRTCADISKAR
RLLGYDPKVSFEDGIAATVAWYKATYMQPQQQTDAAATKVAAAAPAASVS
ANMVM*
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mRNA from alignment at Contig_95:352832..354455+

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_14666 ID=mRNA_14666|Name=jgi.p|Trimin1|351635|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1624bp|location=Sequence derived from alignment at Contig_95:352832..354455+ (Tribonema minus UTEX_B_3156 )
CACACACGACACACAAAAGCCAGACAGCACCAGCAGCAGGCAGGATAGCA AGGCTGGGGCTTCGAGCGAAGCTCCATTGACGACTGGCACGATTCCCTAC ACGCCCCACTTCCGGCATAGTCAGGTCAAGGGAGGGTGAGTTGTGCCGGC ACACTCAGCCACGCACTCGTGTGCTTTATCATCACGCTTTGCTGCCGGCT CTGCTCTGCGAATATGAATTTGCTGCCCTCCTGATGTATCCTCGCACGAC TTTGCTCTGGCGCTGACATGTCATTGTTGCTCTCCGTTATGTGCCATCGC AGAACCACGTGCTGAATCAGCGTCAGCCCAAACAGGCATTCCTTGGCTCC AGCACACCAGCAACACCTTAGCAACTAGTCCAACCGGCGTTCAAAACAGC AGCACCATGGTTGGCTTCGACAGCTCCATGCTCACCGCCAGCCTTAGCGC CGTCAGCAACAACAGCGACCCCATCGAGGACGTGTATGTCTCGGACAGCA TGGGGTCGGAAGACTCCATCTGCACTCCAGACACGCTCTCGGAGGCCGGC GACGATGACGCTGGCATGTTCGAGGACCCCAAGCTCGTCCTGGTCACAGG CGGCGCAGGGTTCGTCGGCAGCAGCGTCGCGGACGCCCTGCTCGCTCGTG GCGACGATGTCATCATCGTTGACGAGGTCAACGACTACTACGACACCACC ATCAAGCGCAGCAACCTGGCCTCCCTCGTCTCGCGCTACGGCAGCGAGAG GTGCAAGGTGTACGAGGGCGACATCTGCGACGTACCCTTCATCACCGCCA TTTTTGAGGAGCACAAGCCCGAGTGGATCGTCCACATGGCGGCCCGGGCT GGCGTGCGCCCCTCCATTCAGGACCCCTTCATCTACGTCCACAGCAACAT CGAGGGCACCACGAGGCTGCTGGAGCTGGCGCGCCAGCACGGCTGCAAGT CCTTTGCCTTCGCCAGCAGCAGCTCCGTGTACGGCGGCAGCGACAAGTCC CTCTTCAGCGAGACGGACCTGGTAGACCACCCCGTGAGCCCGTACGCGGC CTCCAAGAAGGCGTGCGAGCTGCTGGCGCACACGTACCACCACCTCTACA ACCTCAACATTGCGGCGCTGCGCTTCTTCACGGTGTACGGCCCGCGCGGC CGCCCCGACATGGCGCCCTTCAAGTTCATCGACGCCGTCGCGCGCGGCCG CGAGATGCAGCAGTTCGGCGATGGCTCCACGTCGCGCGACTACACGTACA TCACGGATATCGTTGACGGCGTTCTGCGCGCGCTCGACACGCCCCTCGGC TACCAGATCTACAACCTAGGCCGCGGCGAGCCGACGCGCCTGTCGCGCTT CATCAACCTCGTCGAGGCGAACGTCGGGCGCAAGGCGATCATCCGCGTGT GCCCGGAGCAGCCGGGGGACGTGCCGCGCACATGCGCGGACATCTCCAAG GCGCGCCGCCTCCTCGGCTACGACCCCAAGGTGTCGTTTGAGGACGGCAT CGCGGCGACTGTCGCCTGGTACAAGGCGACGTACATGCAGCCGCAGCAGC AGACAGACGCTGCTGCAACGAAAGTGGCCGCAGCCGCCCCCGCCGCTTCC GTCTCCGCCAACATGGTAATGTGA
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Coding sequence (CDS) from alignment at Contig_95:352832..354455+

>mRNA_14666 ID=mRNA_14666|Name=jgi.p|Trimin1|351635|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1218bp|location=Sequence derived from alignment at Contig_95:352832..354455+ (Tribonema minus UTEX_B_3156 )
ATGGTTGGCTTCGACAGCTCCATGCTCACCGCCAGCCTTAGCGCCGTCAG
CAACAACAGCGACCCCATCGAGGACGTGTATGTCTCGGACAGCATGGGGT
CGGAAGACTCCATCTGCACTCCAGACACGCTCTCGGAGGCCGGCGACGAT
GACGCTGGCATGTTCGAGGACCCCAAGCTCGTCCTGGTCACAGGCGGCGC
AGGGTTCGTCGGCAGCAGCGTCGCGGACGCCCTGCTCGCTCGTGGCGACG
ATGTCATCATCGTTGACGAGGTCAACGACTACTACGACACCACCATCAAG
CGCAGCAACCTGGCCTCCCTCGTCTCGCGCTACGGCAGCGAGAGGTGCAA
GGTGTACGAGGGCGACATCTGCGACGTACCCTTCATCACCGCCATTTTTG
AGGAGCACAAGCCCGAGTGGATCGTCCACATGGCGGCCCGGGCTGGCGTG
CGCCCCTCCATTCAGGACCCCTTCATCTACGTCCACAGCAACATCGAGGG
CACCACGAGGCTGCTGGAGCTGGCGCGCCAGCACGGCTGCAAGTCCTTTG
CCTTCGCCAGCAGCAGCTCCGTGTACGGCGGCAGCGACAAGTCCCTCTTC
AGCGAGACGGACCTGGTAGACCACCCCGTGAGCCCGTACGCGGCCTCCAA
GAAGGCGTGCGAGCTGCTGGCGCACACGTACCACCACCTCTACAACCTCA
ACATTGCGGCGCTGCGCTTCTTCACGGTGTACGGCCCGCGCGGCCGCCCC
GACATGGCGCCCTTCAAGTTCATCGACGCCGTCGCGCGCGGCCGCGAGAT
GCAGCAGTTCGGCGATGGCTCCACGTCGCGCGACTACACGTACATCACGG
ATATCGTTGACGGCGTTCTGCGCGCGCTCGACACGCCCCTCGGCTACCAG
ATCTACAACCTAGGCCGCGGCGAGCCGACGCGCCTGTCGCGCTTCATCAA
CCTCGTCGAGGCGAACGTCGGGCGCAAGGCGATCATCCGCGTGTGCCCGG
AGCAGCCGGGGGACGTGCCGCGCACATGCGCGGACATCTCCAAGGCGCGC
CGCCTCCTCGGCTACGACCCCAAGGTGTCGTTTGAGGACGGCATCGCGGC
GACTGTCGCCTGGTACAAGGCGACGTACATGCAGCCGCAGCAGCAGACAG
ACGCTGCTGCAACGAAAGTGGCCGCAGCCGCCCCCGCCGCTTCCGTCTCC
GCCAACATGGTAATGTGA
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