mRNA_14578 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|172390 vs. uniprot
Match: A0A835YHQ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHQ7_9STRA) HSP 1 Score: 1335 bits (3456), Expect = 0.000e+0 Identity = 759/759 (100.00%), Postives = 759/759 (100.00%), Query Frame = 1 Query: 1 MIMCGFAITPRRIIPGTETKPAGAALESVPPHAGGHRQSTLSIGSHLSDSDGEDVGGIGXXXXXXXXDEEGDLSGDPRAVHGSEVTMYSHADLGGALPPSIVNRLCMKPAYRVLRKIQKLAAAGRIRGDPPGRTKSEEVLTSLLESSGVEHTPGRLSSGGDGDSXXXXXXXXXKRPFGGGPAISIAYAAAEARRVMALLERMASERAGWVQLGTGRAAXXXXXXXXXXXXXGDDMALYKWPIPRTRRVRLGASATVRAAPPELLGLLLESAAMLGPDYVVDGQEMIETLSSTAGTAGXXXXXXXXXXXXXXXXXADAGAHDTAIIWFSCTHRRQRMRRDFVVLRCYRPLPSIATGGGTGSGGGLISYASVDHPAFPPGPAYVRGRIEMCGFVVLPHEDGAALVAAPATRPAATAAVXXXXXXVADVVNAVARGGVRPPWMPPREQGSXXXXXXASEVYFYTHLSFSENLPALEDAQASRYLLGPLHILQELRRVVDRTLEYGHSDAARDAAAATANXXXXXXXXXXXXXGDYSPEGSDTGDRGALEAKREAALRDLLVLASDGECMDGPQADWRLVRDGGDDGVRLWKCAQPGSAWSMIRTRARLAAPPSAVLDLLLDEARIAEYDDLFDAIAVVARVDARAAFKRTAYKPIWPTAPRDFSLLSSWGTLDDGSAYLVNRSVDHPDCPEVKGFVRGQLMMCGFLMVPAAPRGCTLTMVVHTELGGNLPPAIVNKVSTGAPAVVSAKLQRIFAAWDTRPAQ 2277 MIMCGFAITPRRIIPGTETKPAGAALESVPPHAGGHRQSTLSIGSHLSDSDGEDVGGIGXXXXXXXXDEEGDLSGDPRAVHGSEVTMYSHADLGGALPPSIVNRLCMKPAYRVLRKIQKLAAAGRIRGDPPGRTKSEEVLTSLLESSGVEHTPGRLSSGGDGDSXXXXXXXXXKRPFGGGPAISIAYAAAEARRVMALLERMASERAGWVQLGTGRAAXXXXXXXXXXXXXGDDMALYKWPIPRTRRVRLGASATVRAAPPELLGLLLESAAMLGPDYVVDGQEMIETLSSTAGTAGXXXXXXXXXXXXXXXXXADAGAHDTAIIWFSCTHRRQRMRRDFVVLRCYRPLPSIATGGGTGSGGGLISYASVDHPAFPPGPAYVRGRIEMCGFVVLPHEDGAALVAAPATRPAATAAVXXXXXXVADVVNAVARGGVRPPWMPPREQGSXXXXXXASEVYFYTHLSFSENLPALEDAQASRYLLGPLHILQELRRVVDRTLEYGHSDAARDAAAATANXXXXXXXXXXXXXGDYSPEGSDTGDRGALEAKREAALRDLLVLASDGECMDGPQADWRLVRDGGDDGVRLWKCAQPGSAWSMIRTRARLAAPPSAVLDLLLDEARIAEYDDLFDAIAVVARVDARAAFKRTAYKPIWPTAPRDFSLLSSWGTLDDGSAYLVNRSVDHPDCPEVKGFVRGQLMMCGFLMVPAAPRGCTLTMVVHTELGGNLPPAIVNKVSTGAPAVVSAKLQRIFAAWDTRPAQ Sbjct: 1 MIMCGFAITPRRIIPGTETKPAGAALESVPPHAGGHRQSTLSIGSHLSDSDGEDVGGIGXXXXXXXXDEEGDLSGDPRAVHGSEVTMYSHADLGGALPPSIVNRLCMKPAYRVLRKIQKLAAAGRIRGDPPGRTKSEEVLTSLLESSGVEHTPGRLSSGGDGDSXXXXXXXXXKRPFGGGPAISIAYAAAEARRVMALLERMASERAGWVQLGTGRAAXXXXXXXXXXXXXGDDMALYKWPIPRTRRVRLGASATVRAAPPELLGLLLESAAMLGPDYVVDGQEMIETLSSTAGTAGXXXXXXXXXXXXXXXXXADAGAHDTAIIWFSCTHRRQRMRRDFVVLRCYRPLPSIATGGGTGSGGGLISYASVDHPAFPPGPAYVRGRIEMCGFVVLPHEDGAALVAAPATRPAATAAVXXXXXXVADVVNAVARGGVRPPWMPPREQGSXXXXXXASEVYFYTHLSFSENLPALEDAQASRYLLGPLHILQELRRVVDRTLEYGHSDAARDAAAATANXXXXXXXXXXXXXGDYSPEGSDTGDRGALEAKREAALRDLLVLASDGECMDGPQADWRLVRDGGDDGVRLWKCAQPGSAWSMIRTRARLAAPPSAVLDLLLDEARIAEYDDLFDAIAVVARVDARAAFKRTAYKPIWPTAPRDFSLLSSWGTLDDGSAYLVNRSVDHPDCPEVKGFVRGQLMMCGFLMVPAAPRGCTLTMVVHTELGGNLPPAIVNKVSTGAPAVVSAKLQRIFAAWDTRPAQ 759
BLAST of jgi.p|Trimin1|172390 vs. uniprot
Match: D7FSJ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSJ0_ECTSI) HSP 1 Score: 472 bits (1214), Expect = 2.100e-148 Identity = 339/868 (39.06%), Postives = 426/868 (49.08%), Query Frame = 1 Query: 247 SEVTMYSHADLGGALPPSIVNRLCMKPAYRVLRKIQKLAAAGRI--RGDPPG--------------------RTKSEEVLTSLL-------------------ESSGVEHTPGRLSSGG-------------------------DGDSXXXXXXXXXKRPFGGGPAISIAYAAAEARRVMALLERMASERA-GWVQLGTGRAAXXXXXXXXXXXXXGDDMALYKWPIPRTRRVRLGASATVRAAPPELLGLLLESAAMLGPDYVVDGQEMIETLSSTAGTAGXXXXXXXXXXXXXXXXXADAGA--------HDTAIIWFSCTHRRQRMRRDFVVLRCYRPLPSIATGGGTGSGGGLISYASVDHPAFPPGPAYVRGRIEMCGFVVLPHED----------------------------------------GAALVAAPATRPAATAAVXXXXXXVADVVNAVARGGVRPPWMPPREQGSXXXXXX----------------ASEVYFYTHLSFSENLPALEDAQASRYLLGPLHILQELRRVVDRTL-------EYGHSDAARDAAAATANXXXXXXXXXXXXX----------------------------GDYSPEGSDTGDRGALE----------------------AKREAALRDLLVLASDGECMDGPQADWRLVRDGGDDGVRLWKCAQPGSAWSMIRTRARLAAPPSAVLDLLLDEARIAEYDDLFDAIAVVARVDARAAFKRTAYKPIWPTAPRDFSLLSSWGTLDDGSAYLVNRSVDHPDCPEVKGFVRGQLMMCGFLMVPAAPR---GCTLTMVVHTELGGNLPPAIVNKVSTGAPAVVSAKLQRIFAAWDTRPAQ 2277 SE TMY+H DLGG LP S++N+LC KPAYRVLRKIQ + A G + RGD RT SE+VL SLL E GV + GG G PF P +S AYA +EA+R+M L RMAS+ A GW QLG + DMALYK P+ T++VRLGAS V A P EL+G+LLE+AAMLGPDY+VD QE++ET SS T ADA A HDTA+ WFSCTH+RQR+ RDFV+LRC+RPLP GG+I+Y+SVDHP PP P YVRG++++ GFV+LP XXXXXX+ D V+ XXXXXX SEV F+THL+FS LP ++ +A R+ +GPLHILQEL+ VV+RTL E H A R A XXX G+ EG T D G+L A+REA LRD+L +SDGECMDGPQ DWR+++D DG++LW+ PG+ W MIRTRA + APP VL LL+++ I +YD+LF I VV +D + FKRT+YKPIWPTAPRDFSLLSSWGTL+DG+ YL+NRSVDHP P VKG VRG +M+CGFLMVP A GC +TM+VHT+LGGNLP I+N++ST +P + +L+ F + D +P++ Sbjct: 280 SEFTMYAHTDLGGVLPASVINKLCKKPAYRVLRKIQDMIATGTLVKRGDDGSSAGGSAGGGWPLARSGLNMPRTDSEDVLGSLLAEGMPDRAAAANLENVPEGEMEGVASGAETETMGGHQRRGSHXXXXXXXXXXXXXGSMSQQGQLPPAAAPSRAPSPFL--PGLSRAYAISEAQRIMRTLNRMASDEALGWSQLGVAAHS---------------DMALYKSPVAGTKKVRLGASTCVSALPSELVGILLENAAMLGPDYIVDRQELLETFSSGVNTG---------------EGLADAAARAEGEGPKHDTAVYWFSCTHKRQRICRDFVILRCFRPLPGS---------GGVIAYSSVDHPGLPPCPDYVRGKLDVSGFVILPSPQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGDYVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSEVTFFTHLTFSAYLPDFQEMEACRHFVGPLHILQELKWVVERTLGSFQEDDEVLHHGAPRMGAGGAGGGADWGHILPRXXXXXXXXXXXXXXXXXXXXXXGAARVDTSAGEEETEGG-TIDSGSLSDSESVPARETAMVSNAVLLRVAARREAMLRDMLAFSSDGECMDGPQVDWRIIKD--SDGLKLWRATVPGTVWCMIRTRAAVTAPPREVLTYLLNDSCIPDYDELFAKIEVVESIDETSVFKRTSYKPIWPTAPRDFSLLSSWGTLEDGTTYLLNRSVDHPMNPPVKGHVRGIVMLCGFLMVPRARESGGGCVITMIVHTDLGGNLPATILNRLSTSSPWRLVQRLRSAFESSDCQPSR 1103
BLAST of jgi.p|Trimin1|172390 vs. uniprot
Match: A0A6H5K079_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K079_9PHAE) HSP 1 Score: 467 bits (1202), Expect = 6.790e-144 Identity = 326/868 (37.56%), Postives = 414/868 (47.70%), Query Frame = 1 Query: 247 SEVTMYSHADLGGALPPSIVNRLCMKPAYRVLRKIQKLAAAGRI--RGDPPG--------------------RTKSEEVLTSLLE--------SSGVEHTP------------------------------------GRLSSGGDGDSXXXXXXXXXKRPFGGGPAISIAYAAAEARRVMALLERMASERA-GWVQLGTGRAAXXXXXXXXXXXXXGDDMALYKWPIPRTRRVRLGASATVRAAPPELLGLLLESAAMLGPDYVVDGQEMIETLSSTAGTAGXXXXXXXXXXXXXXXXXADAGA--------HDTAIIWFSCTHRRQRMRRDFVVLRCYRPLPSIATGGGTGSGGGLISYASVDHPAFPPGPAYVRGRIEMCGFVVLPHED--------------------------------------------------------GAALVAAPATRPAATAAVXXXXXXVADVVNAVARGGVRPPWMPPREQGSXXXXXXASEVYFYTHLSFSENLPALEDAQASRYLLGPLHILQELRRVVDRTL-------EYGHSDAARDAAAATANXXXXXXXXXXXXX----------------------------GDYSPEGSDTGDRGALE----------------------AKREAALRDLLVLASDGECMDGPQADWRLVRDGGDDGVRLWKCAQPGSAWSMIRTRARLAAPPSAVLDLLLDEARIAEYDDLFDAIAVVARVDARAAFKRTAYKPIWPTAPRDFSLLSSWGTLDDGSAYLVNRSVDHPDCPEVKGFVRGQLMMCGFLMVPAAPR---GCTLTMVVHTELGGNLPPAIVNKVSTGAPAVVSAKLQRIFAAWDTRPAQ 2277 SE TMY+H DLGG LP S++N+LC KPAYRVLRKIQ + A + RGD RT SE+VL SLL ++ +E+ P R S G PF P +S AYA +EA+R+M L RMAS+ A GW QLG + DMALYK P+ T++VRLGAS V A P EL+G+LLE+AAMLGPDY+VD QE++ET SS T ADA A HDTA+ WFSCTH+RQR+ RDFV+LRC+RPLP GG+I+Y+SVDHP PP P YVRG++++ GFV+LP XXXXXX SEV F+THL+FS LP ++ +A R+ +GPLHILQEL+ VV+RTL E H A R A G+ EG T D G+L A+REA LRD+L +SDGECMDGPQ DWR+++D DG++LW+ PG+ W MIRTRA + APP VL LL+++ I EYD+LF I V+ +D + FKRT+YKPIWPTAPRDFSLLSSWGTL+DG+ YL+NRSVDHP P VKG VRG +M+CGFLMVP A GC +TM+VHT+LGGNLP I+N++ST +P + +L+ F + D +P++ Sbjct: 610 SEFTMYAHTDLGGVLPASVINKLCKKPAYRVLRKIQDMIATDTLVKRGDDGSSAGGSAGGGWPLARSGLNMPRTDSEDVLGSLLAEGMPDRAAAANLENVPEGEMEGVASGAETETMGGHQRRGSXXXXXXXXXXXXXRGSMSQQGQLPPAPAPSRAPSPFL--PGLSRAYAISEAQRIMRTLNRMASDEALGWSQLGVAAHS---------------DMALYKSPVAGTKKVRLGASTCVSALPSELVGILLENAAMLGPDYIVDRQELLETFSSGVNTG---------------EGLADAAARAAGEGPKHDTAVYWFSCTHKRQRICRDFVILRCFRPLPGS---------GGVIAYSSVDHPGLPPCPDYVRGKLDVSGFVILPSPQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEGGAGGVSEVTFFTHLTFSAYLPDFQEMEACRHFVGPLHILQELKWVVERTLGSFQEDDEVLHDGAPRMGAGGAGGRADWGHVLSRRRSXXXXXXXXXXXXXXXXXXXGAARVDTSAGEEETEGG-TIDSGSLSDSESVPARDTAMVSNAVLLRVSARREAMLRDMLAFSSDGECMDGPQVDWRIIKD--SDGLKLWRATVPGTVWCMIRTRAAVTAPPREVLTYLLNDSCIPEYDELFAKIEVIESIDDTSVFKRTSYKPIWPTAPRDFSLLSSWGTLEDGTTYLLNRSVDHPLNPPVKGHVRGIVMLCGFLMVPRARESGGGCVITMIVHTDLGGNLPATILNRLSTSSPWRLVQRLRSAFESSDCQPSR 1433
BLAST of jgi.p|Trimin1|172390 vs. uniprot
Match: A0A7S2UXV3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXV3_9STRA) HSP 1 Score: 132 bits (331), Expect = 2.620e-29 Identity = 75/211 (35.55%), Postives = 114/211 (54.03%), Query Frame = 1 Query: 1636 EAKREAALRDLLVLASDGEC-MDGPQADWRLVRDGGDDGVRLWKCAQPGSAWSMIRTRARLAAPPSAVLDLLLDEARIAEYDDLFDAIAVVARVDARAAFKRTAYKPIWPTAPRDFSLLSSWGTLDDGSAYLVNRSVDHP-DCPEVKGFVRGQLMMCGFLMVPAAPRGCTL----TMVVHTELGGN-LPPAIVNKVSTGAPAVVSAKLQRI 2247 E RE L DLL LA+DG ++ W V D G+ + GS W R R+ A P V L++++ARI EYD++F +I ++ RV+ RAA + + YKPIWPTAPRDF ++++W L DG + RSV+HP K VR +++ G+++ P + T+++HT++ + LP A VN + P +QRI Sbjct: 194 EIDRELMLTDLLFLAADGPMGVESGGKPWDHVHYEQDGGIHVSTIVVEGSQWQCFRVTGRMQAAPMDVCSLVINDARIGEYDEMFGSIQMIERVNERAAIRHSYYKPIWPTAPRDFVIITTWEPLPDGRVVVATRSVEHPLVASRTKDHVRARVLCAGYVLEPVVLEDGRVETDCTVIIHTDVSCDWLPAAFVNPFTNTRPVGYVQAMQRI 404
BLAST of jgi.p|Trimin1|172390 vs. uniprot
Match: A0A067C6Z9_SAPPC (START domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C6Z9_SAPPC) HSP 1 Score: 113 bits (282), Expect = 1.240e-24 Identity = 59/195 (30.26%), Postives = 106/195 (54.36%), Query Frame = 1 Query: 1672 VLASDGECMDGPQADWRLVRDGGDDGVRLWKCAQPGSAWSMIRTRARLAAPPSAVLDLLLDEARIAEYDDLFDAIAVVARVDARAAFKRTAYKPIWPTAPRDFSLLSSWGTLDDGSAYLVNRSVDHPDCPEVKGFVRGQLMMCGFLMVPAAPRGCTLTMVVHTELGGNLPPAIVNKVSTGAPAVVSAKLQRIFAA 2256 +LA D D W V+D +DGV + + GSAW+ I+ + + L D +++ +D++ D V+ + + + KP++PT RDF +++S LDDGS + +SV+H P K FVR + G+++ P P C++T++VH +LGG +P A++N +S +P + +L++++AA Sbjct: 34 ILAKDSG--DDKSTTWSHVKD--NDGVSIDRGIVDGSAWNAIKATTTVDCAADDLAAKLSDASQMHIFDEMTDNCRVIEALKESTSIRYVQAKPVFPTTARDFLVVTSQQHLDDGSIVIGTKSVEHDSVPVDKHFVRAHTHVSGYIVRPLTPTSCSVTLIVHMDLGGYMPAAVINLLSVSSPIKLMKRLRQLYAA 224
BLAST of jgi.p|Trimin1|172390 vs. uniprot
Match: A0A1V9YKF4_9STRA (START domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YKF4_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 5.000e-19 Identity = 54/205 (26.34%), Postives = 106/205 (51.71%), Query Frame = 1 Query: 1639 AKREAALRDLLVLASDGECMDGPQADWRLVRDGGDDGVRLWKCAQPGSAWSMIRTRARLAAPPSAVLDLLLDEARIAEYDDLFDAIAVVARVDARAAFKRTAYKPIWPTAPRDFSLLSSWGTLDDGSAYLVNRSVDHPDCPEVKGFVRGQLMMCGFLMVPAAPRGCTLTMVVHTELGGNLPPAIVNKVSTGAPAVVSAKLQRIFA 2253 A + ++RDLL + + W V+D DG+ + + S W+ I+ A + + L D +++ +D++ D VV ++ A+ + KP++PT RDF ++++ + D + + +S+ H D PE FVR + G+L+ P + C +T++VH +LGG +P A++N +S +P + +LQ +++ Sbjct: 13 AVADDSIRDLLAKDAGAD----KNTVWSHVKD--SDGISVHRGVVHNSPWNCIKATAHVHCSAETLAGHLADASQMHIFDEMTDNCRVVEVLNPTASIRYVQAKPVFPTTARDFLVVTAEQRVGD-TIVIGTKSIKHDDVPEDGSFVRAHTHVSGYLLRPVSSTECQVTLIVHMDLGGYMPAAVINLLSVSSPIKLMKRLQHLYS 210
BLAST of jgi.p|Trimin1|172390 vs. uniprot
Match: A0A067CAV6_SAPPC (START domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CAV6_SAPPC) HSP 1 Score: 91.7 bits (226), Expect = 2.950e-17 Identity = 50/181 (27.62%), Postives = 95/181 (52.49%), Query Frame = 1 Query: 1717 WRLVRDGGDDGVRLWKCAQPGSAWSMIRTRARLAAPPSAVLDLLLDEARIAEYDDLFDAIAVVARVDARAAFKRTAY---KPIWPTAPRDFSLLSSWGTLDDGSAYLVNRSVDHPDCPEVKGFVRGQLMMCGFLMVPAAPRGCTLTMVVHTELGGNLPPAIVNKVSTGAPAVVSAKLQRIF 2250 W V+D DGV + + S W+ I+ + + + L D ++ +D++ D ++ ++ A K Y KP++PT RDF +++S L+DGS + +SV+H P K FVR + G+++ P P C++T++VH +LGG +P ++N +S +P + + + ++ Sbjct: 36 WSHVKD--TDGVSVDRGINAHSPWNAIKATTTVHCSANDLASKLNDPQQMHIFDEMTDNCRIIEALNP-AETKTIRYVQAKPVFPTTARDFLVVTSEQRLEDGSIVIGTKSVEHDSVPVSKHFVRAHTHVSGYIIRPLTPTSCSVTLIVHMDLGGYMPAYVINLLSVASPIQLLKRFRVLY 213
BLAST of jgi.p|Trimin1|172390 vs. uniprot
Match: A0A024TBS2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TBS2_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 5.910e-17 Identity = 62/219 (28.31%), Postives = 109/219 (49.77%), Query Frame = 1 Query: 1606 GSDTGDRGALEAKREAALRDLLVLASDGECMDGPQADWRLVRDGGDDGVRLWKCAQPGSAWSMIRTRARLAAPPSAVLDLLLDEARIAEYDDLFDAIAVV-ARVDARAAFKRTAYKPIWPTAPRDFSLLSSWGTLDDGSAYLVNRSVDHPDCPEVKGFVRGQLMMCGFLMVPA--APR-GCTLTMVVHTELGGNLPPAIVNKVSTGAPAVVSAKLQRIF 2250 G+D G LE ++ LL ASD C+D W V+ + +++ A GS W+ ++ + + + L+D I +DD+ + V+ A ++ + + KP++PTA RDF ++S+ D + RS+DH P FVRG + + G+++ P P C +TM+ H +LGG LP ++N +S APA + K++ ++ Sbjct: 272 GADPGTPRGLEQFACESVAILLAKASD-HCVD---TTWSHVK-ATSTAIDVFRGAVQGSDWTAVKATGVVRCSAARLASKLMDPTEIVRFDDMTASCRVLMALPNSTTSVRHITAKPVFPTAARDFVVMSTMEVKPDDVVVIATRSMDHATAPATSNFVRGHINISGYILDPVDLGPEPACHVTMMAHMDLGGMLPAVVINLLSVEAPAKLLNKVRELY 485
BLAST of jgi.p|Trimin1|172390 vs. uniprot
Match: A0A067CZH3_SAPPC (START domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CZH3_SAPPC) HSP 1 Score: 90.1 bits (222), Expect = 8.360e-17 Identity = 51/193 (26.42%), Postives = 99/193 (51.30%), Query Frame = 1 Query: 1672 VLASDGECMDGPQADWRLVRDGGDDGVRLWKCAQPGSAWSMIRTRARLAAPPSAVLDLLLDEARIAEYDDLFDAIAVVARVDARAAFKRTAYKPIWPTAPRDFSLLSSWGTLDDGSAYLVNRSVDHPDCPEVKGFVRGQLMMCGFLMVPAAPRGCTLTMVVHTELGGNLPPAIVNKVSTGAPAVVSAKLQRIF 2250 VLA D + P+ W + GV + + G+AW+ I+ A + + L D ++ +D++ D V+ + A + + KP++PT RDF +++ + D + + +S++ P PE FVR + G+++ P C +T++VH +LGG++PPA++N +S+ +P + LQ ++ Sbjct: 18 VLAKDAN--EDPRTTWGEAKL--SHGVLVSRGVVAGNAWNCIKATATIGCAAEVLAAKLADADEMSTFDEMTDNCRVLRDLGATSV-RYVQAKPVFPTTARDFLVVTCKQVVGD-AIVIGTKSIELPSMPENPSFVRAHTHISGYILRPITAHSCQVTLIVHMDLGGHMPPAVINLLSSTSPVKLLNHLQHLY 204
BLAST of jgi.p|Trimin1|172390 vs. uniprot
Match: A0A1V9Z6C9_9STRA (START domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z6C9_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 2.000e-16 Identity = 47/168 (27.98%), Postives = 90/168 (53.57%), Query Frame = 1 Query: 1747 GVRLWKCAQPGSAWSMIRTRARLAAPPSAVLDLLLDEARIAEYDDLFDAIAVVARVDARAAFKRTAYKPIWPTAPRDFSLLSSWGTLDDGSAYLVNRSVDHPDCPEVKGFVRGQLMMCGFLMVPAAPRGCTLTMVVHTELGGNLPPAIVNKVSTGAPAVVSAKLQRIF 2250 GV++ K G+ W+ I+ A + + D L D ++ +D++ D V+ V+ + + KP++PT RDF ++++ D A + +S+ HP PE FVR + G+++ P C +T++VH +LGG++PPA++N +S+ +P + Q ++ Sbjct: 37 GVKVSKGVVAGNPWNCIKATAVVECSAKFLADKLNDPNEMSTFDEMTDNCRVI-EVNGVTSVRYVQAKPVFPTTARDFLVVTAMEERGDVIA-IGTKSIKHPAVPEDPLFVRALTHVSGYIIRPLGEHKCEVTLIVHMDLGGHMPPAVINLLSSSSPVKLLQHFQHLY 202 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|172390 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_14578 ID=mRNA_14578|Name=jgi.p|Trimin1|172390|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2280bp|location=Sequence derived from alignment at Contig_92:66005..68814- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGATCATGTGCGGCTTCGCCATCACGCCGCGCCGCATCATCCCCGGCACback to top protein sequence of jgi.p|Trimin1|172390 >Trimin1|172390|e_gw1.92.75.1 ID=Trimin1|172390|e_gw1.92.75.1|Name=jgi.p|Trimin1|172390|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=760bp MIMCGFAITPRRIIPGTETKPAGAALESVPPHAGGHRQSTLSIGSHLSDSback to top mRNA from alignment at Contig_92:66005..68814- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_14578 ID=mRNA_14578|Name=jgi.p|Trimin1|172390|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2810bp|location=Sequence derived from alignment at Contig_92:66005..68814- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_92:66005..68814- >mRNA_14578 ID=mRNA_14578|Name=jgi.p|Trimin1|172390|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2280bp|location=Sequence derived from alignment at Contig_92:66005..68814- (Tribonema minus UTEX_B_3156 )back to top |