mRNA_1454 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|161983 vs. uniprot
Match: A0A835Z566_9STRA (FirrV-1-B50 n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z566_9STRA) HSP 1 Score: 880 bits (2273), Expect = 0.000e+0 Identity = 437/437 (100.00%), Postives = 437/437 (100.00%), Query Frame = 1 Query: 1 TIWKSVHTRFTSCALDDEFQELSTSGFASTSTATISRYGDLVSRITLEIVLPPLSAPDIPDTSAGAPAGALYADTGAHYVNCIGFAAWEDCIIEIGGSTVDQLFSDFCFIYEELAGRAGMRLEEAIGRVPFSADVDEDLIEKSTREQTLYVPLPLWFSKYQPATWGLALPIVALSFHEIKLKLKTRSIAECVSVIYKDSAGDWRLSDLAPINATTGTALVNSDMKIRLLVSFVYLDVTERNAMSSVAHSFLINVTQRQVMAVAAGSFSKIENKLFFNHPCSSLLWYMRPLDWNTEGGRRRFSCGYKDRYDFSHQQQGSVDATKGLPWGDAIDAITTASLSLNGHQRWPQDQNSAYFRVLTPYTSWRTMPTTNIYTYSFALQAHDWQPTAHLNFSRYNHVSLGLTFAAGIKASELIAMVESYNLLIIANGLGGLKFSN 1311 TIWKSVHTRFTSCALDDEFQELSTSGFASTSTATISRYGDLVSRITLEIVLPPLSAPDIPDTSAGAPAGALYADTGAHYVNCIGFAAWEDCIIEIGGSTVDQLFSDFCFIYEELAGRAGMRLEEAIGRVPFSADVDEDLIEKSTREQTLYVPLPLWFSKYQPATWGLALPIVALSFHEIKLKLKTRSIAECVSVIYKDSAGDWRLSDLAPINATTGTALVNSDMKIRLLVSFVYLDVTERNAMSSVAHSFLINVTQRQVMAVAAGSFSKIENKLFFNHPCSSLLWYMRPLDWNTEGGRRRFSCGYKDRYDFSHQQQGSVDATKGLPWGDAIDAITTASLSLNGHQRWPQDQNSAYFRVLTPYTSWRTMPTTNIYTYSFALQAHDWQPTAHLNFSRYNHVSLGLTFAAGIKASELIAMVESYNLLIIANGLGGLKFSN Sbjct: 1 TIWKSVHTRFTSCALDDEFQELSTSGFASTSTATISRYGDLVSRITLEIVLPPLSAPDIPDTSAGAPAGALYADTGAHYVNCIGFAAWEDCIIEIGGSTVDQLFSDFCFIYEELAGRAGMRLEEAIGRVPFSADVDEDLIEKSTREQTLYVPLPLWFSKYQPATWGLALPIVALSFHEIKLKLKTRSIAECVSVIYKDSAGDWRLSDLAPINATTGTALVNSDMKIRLLVSFVYLDVTERNAMSSVAHSFLINVTQRQVMAVAAGSFSKIENKLFFNHPCSSLLWYMRPLDWNTEGGRRRFSCGYKDRYDFSHQQQGSVDATKGLPWGDAIDAITTASLSLNGHQRWPQDQNSAYFRVLTPYTSWRTMPTTNIYTYSFALQAHDWQPTAHLNFSRYNHVSLGLTFAAGIKASELIAMVESYNLLIIANGLGGLKFSN 437
BLAST of jgi.p|Trimin1|161983 vs. uniprot
Match: A0A835ZCT3_9STRA (FirrV-1-B50 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCT3_9STRA) HSP 1 Score: 775 bits (2001), Expect = 1.040e-280 Identity = 388/424 (91.51%), Postives = 400/424 (94.34%), Query Frame = 1 Query: 10 KSVHTRFTSCALDDEFQELSTSGFASTSTATISRYGDLVSRITLEIVLPPLSAPDIPDTSAGAPAGALYADTGAHYVNCIGFAAWEDCIIEIGGSTVDQLFSDFCFIYEELAGRAGMRLEEAIGRVPFSADVDEDLIEKSTREQTLYVPLPLWFSKYQPATWGLALPIVALSFHEIKLKLKTRSIAECVSVIYKDSAGDWRLSDLAPINATTGTALVNSDMKIRLLVSFVYLDVTERNAMSSVAHSFLINVTQRQVMAVAAGSFSKIENKLFFNHPCSSLLWYMRPLDWNTEGGRRRFSCGYKDRYDFSHQQQGSVDATKGLPWGDAIDAITTASLSLNGHQRWPQDQNSAYFRVLTPYTSWRTMPTTNIYTYSFALQAHDWQPTAHLNFSRYNHVSL--GLTFAAGIKASELIAMVESYNLLI 1275 ++VHTRFTSCALDDEFQELSTSGFASTSTATISRYGDLVSRITLEIVLPPLSAPDIPDTS+GA AGA YADT A+YVN I FAAWED I+EIGGSTVDQLFSDFCFIYEELAGRAGMRLEEAIGRVPFSADVDEDL EKS REQTLYVPLPLWFSKYQPATWGLALPIVALSFHEIKLKLKTRSIAECVSV+YKDSAGDWRLSDLAPINATTGTALVNSDMK+RLLVSFVYLDVTERNAMSSVAHSFLINVTQRQVMAVAAGSFSKIENKLFFNHPCSSLLWYMRP DWN EGGRRRFSCGYKDR+DFSHQ+QG+VDATKGL WGD +D ITTAS SLNGHQRWPQDQN+ YFRVLTPYTSWRTMPTTNIYTYSFALQA DWQPTAHLN SR L GLTFAAGIKASELIAMVESYNLLI Sbjct: 40 RAVHTRFTSCALDDEFQELSTSGFASTSTATISRYGDLVSRITLEIVLPPLSAPDIPDTSSGAGAGAHYADTAAYYVNSIDFAAWEDVILEIGGSTVDQLFSDFCFIYEELAGRAGMRLEEAIGRVPFSADVDEDLAEKSAREQTLYVPLPLWFSKYQPATWGLALPIVALSFHEIKLKLKTRSIAECVSVVYKDSAGDWRLSDLAPINATTGTALVNSDMKLRLLVSFVYLDVTERNAMSSVAHSFLINVTQRQVMAVAAGSFSKIENKLFFNHPCSSLLWYMRPQDWNLEGGRRRFSCGYKDRFDFSHQEQGTVDATKGLAWGDTVDPITTASRSLNGHQRWPQDQNAVYFRVLTPYTSWRTMPTTNIYTYSFALQAQDWQPTAHLNMSRLKKTGLKNGLTFAAGIKASELIAMVESYNLLI 463
BLAST of jgi.p|Trimin1|161983 vs. uniprot
Match: A0A835Z3V1_9STRA (Putative major capsid protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3V1_9STRA) HSP 1 Score: 761 bits (1965), Expect = 5.470e-276 Identity = 366/432 (84.72%), Postives = 408/432 (94.44%), Query Frame = 1 Query: 1 TIWKSVHTRFTSCALDDEFQELSTSGFASTSTATISRYGDLVSRITLEIVLPPLSAPDIPDTSAGAPAGALYADTGAHYVNCIGFAAWEDCIIEIGGSTVDQLFSDFCFIYEELAGRAGMRLEEAIGRVPFSADVDEDLIEKSTREQTLYVPLPLWFSKYQPATWGLALPIVALSFHEIKLKLKTRSIAECVSVIYKDSAGDWRLSDLAPINATTGTALVNSDMKIRLLVSFVYLDVTERNAMSSVAHSFLINVTQRQVMAVAAGSFSKIENKLFFNHPCSSLLWYMRPLDWNTEGGRRRFSCGYKDRYDFSHQQQGSVDATKGLPWGDAIDAITTASLSLNGHQRWPQDQNSAYFRVLTPYTSWRTMPTTNIYTYSFALQAHDWQPTAHLNFSRYNHVSLGLTFAAGIKASELIAMVESYNLLIIANGLGG 1296 TI+KSVHTRFTS ALDD+FQELSTSGFASTSTAT+SRYGDL+SRITLEIVLP L APDIPDTSAGA AGALYA+TGA+YVNCIG+A WEDCI+EIGGST+DQLFSDFCFIYEE+AGRAG+RLEEA+GRV FS VD+DLIEKS+REQTLYVPLPLWFSKY PAT+GLALPIVALSFHEIKLKLKTRSIAECVSV+YKD+AGDWRLSDLAPIN TGTALVNSD+K+RLLVS+VYLDVTERNAMSSVAHS LINVTQRQVM+VAAGS++K E KLF NHPC+ L+WY+RPLDWNTEGGRRRFSCGYKDR+DFSHQ++GSVD TKGLPWGD++DAITTASLSLNGHQRWP D + YFRV+TP+TSWRTMP+T IY+YSFALQAHDWQPT+HLNFSR +H+SLGLTFA+GIKASEL+A VESYNLL+IANGLGG Sbjct: 1 TIFKSVHTRFTSFALDDDFQELSTSGFASTSTATLSRYGDLISRITLEIVLPALKAPDIPDTSAGASAGALYAETGAYYVNCIGWAVWEDCILEIGGSTIDQLFSDFCFIYEEMAGRAGLRLEEAVGRVAFSEAVDDDLIEKSSREQTLYVPLPLWFSKYNPATFGLALPIVALSFHEIKLKLKTRSIAECVSVVYKDAAGDWRLSDLAPINKATGTALVNSDLKMRLLVSYVYLDVTERNAMSSVAHSMLINVTQRQVMSVAAGSYAKSEQKLFMNHPCTDLIWYLRPLDWNTEGGRRRFSCGYKDRFDFSHQEEGSVDPTKGLPWGDSVDAITTASLSLNGHQRWPADMKANYFRVVTPWTSWRTMPSTPIYSYSFALQAHDWQPTSHLNFSRLDHISLGLTFASGIKASELVAFVESYNLLVIANGLGG 432
BLAST of jgi.p|Trimin1|161983 vs. uniprot
Match: A0A835Z4S3_9STRA (Large eukaryotic DNA virus major capsid protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4S3_9STRA) HSP 1 Score: 612 bits (1577), Expect = 1.850e-214 Identity = 298/438 (68.04%), Postives = 362/438 (82.65%), Query Frame = 1 Query: 1 TIWKSVHTRFTSCALDDEFQELSTSGFASTSTATISRYGDLVSRITLEIVLPPLSAPDIPDTSAGAPAGALYADTGAHYVNCIGFAAWEDCIIEIGGSTVDQLFSDFCFIYEELAGRAGMRLEEAIGRVPFSADVDEDLIEKSTREQTLYVPLPLWFSKYQPATWGLALPIVALSFHEIKLKLKTRSIAECVSVIYKDSAGDWRLSD-LAPINATTGTALVNSDMKIRLLVSFVYLDVTERNAMSSVAHSFLINVTQRQVMAVAAGSFSKIENKLFFNHPCSSLLWYMRPLDWNTEGGRRRFSCGYKDRYDFSHQQQGSVDATKGLPWGDAIDAITTASLSLNGHQRWPQDQNSAYFRVLTPYTSWRTMPTTNIYTYSFALQAHDWQPTAHLNFSRYNHVSLGLTFAAGIKASELIAMVESYNLLIIANGLGGLKFSN 1311 TIW+SVHTRFTSCA+DDEFQ+LS SGF ++S+ATI+RYGDL+SR+TLEI LPPL+AP +P T ADT AH+VNCIGFA WED +EIGGS VDQL+SDF IYEELAGR G+RLEEAIGRV FS VDEDLIEK+ ++Q LYVPLPLWFSKYQPAT+GLALPIVAL+FH++++K+KTRSI+EC V+YKD+A W+L++ P+NA TGTALVN+D+KIRL+V+ VYLD TER AMSSV HSFLI+ QRQV ++AA +K E KLFFNHP SSL+W++RPLDWNTE GRRRFSCG++DRYDF+ + S DA+ LP+GDA+D I TASL+LNGH RWP D +S YFR+ PY +WRTMPTT+IYTYSFAL+AH WQPT+HLNFSR +HVSLG TF IK+SE + VE+YNLL+I +GLGGL+FSN Sbjct: 161 TIWRSVHTRFTSCAMDDEFQDLSNSGFDTSSSATINRYGDLISRVTLEITLPPLAAPQVPITGTSPVTYHPAADTAAHWVNCIGFACWEDVQVEIGGSLVDQLYSDFAMIYEELAGRPGVRLEEAIGRVQFSDAVDEDLIEKAKKQQILYVPLPLWFSKYQPATYGLALPIVALTFHDVRIKIKTRSISECTCVLYKDNAA-WKLAENQIPLNANTGTALVNADLKIRLMVTSVYLDTTERTAMSSVVHSFLISTAQRQVHSIAANQSTKQEEKLFFNHPASSLIWFVRPLDWNTEAGRRRFSCGFRDRYDFT-AHEASTDAS--LPYGDAVDPIRTASLTLNGHARWPTDMDSRYFRMHMPYCAWRTMPTTSIYTYSFALEAHQWQPTSHLNFSRLDHVSLGWTFCPNIKSSEAFSFVEAYNLLVIRDGLGGLRFSN 594
BLAST of jgi.p|Trimin1|161983 vs. uniprot
Match: A0A835ZBK3_9STRA (Putative major capsid protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBK3_9STRA) HSP 1 Score: 573 bits (1476), Expect = 4.070e-201 Identity = 279/439 (63.55%), Postives = 346/439 (78.82%), Query Frame = 1 Query: 1 TIWKSVHTRFTSCALDDEFQELSTSGFASTSTATISRYGDLVSRITLEIVLPPLSAPDIPDTSAGAPAGALYADTGAHYVNCIGFAAWEDCIIEIGGSTVDQLFSDFCFIYEELAGRAGMRLEEAIGRVPFSADVDEDLIEKSTREQTLYVPLPLWFSKYQPATWGLALPIVALSFHEIKLKLKTRSIAECVSVIYKDSAGD-WRLSD-LAPINATTGTALVNSDMKIRLLVSFVYLDVTERNAMSSVAHSFLINVTQRQVMAVAAGSFSKIENKLFFNHPCSSLLWYMRPLDWNTEGGRRRFSCGYKDRYDFSHQQQGSVDATKGLPWGDAIDAITTASLSLNGHQRWPQDQNSAYFRVLTPYTSWRTMPTTNIYTYSFALQAHDWQPTAHLNFSRYNHVSLGLTFAAGIKASELIAMVESYNLLIIANGLGGLKFSN 1311 TIW++VHTRFTSCA+DDE QELS SGF ++S+ATI+RYGDL+SR++LEIVLPPL+AP+I A A AD A+YVN IG+A WED +EIGGS VDQL+SDF I+EELAGR G+RLEE IG+V +SA+VD+DLIEK++R+QTLYVPLPLW SKYQPATWGLALPIVAL+FH++++K+KTR IA+C V ++D+ W L + L P+N T T LVNSD+KIRL+++ VYLDVTER AMSSV HSFLIN QRQ+ V A SK+E KL+ NHPCS++ W +RPL+WNT GRRRFSCG++DRYDFSH++ G+V T LP+G+AI I ASLSLNGHQRWP D S+YF PY WRTMP T I TYSFAL+A WQPT+ LNFSR +HVSLG F A ++ASE++ E+YNLL+I +GLGGL+FSN Sbjct: 27 TIWRAVHTRFTSCAMDDELQELSNSGFDTSSSATINRYGDLISRVSLEIVLPPLAAPEIAIAGASPAANYAPADCAAYYVNSIGYACWEDVQVEIGGSLVDQLYSDFAVIFEELAGRPGLRLEECIGKVQYSAEVDDDLIEKASRQQTLYVPLPLWMSKYQPATWGLALPIVALTFHDVRIKIKTRPIADCTVVCHRDAVSQAWTLDEGLLPLNGNTLTPLVNSDLKIRLMITSVYLDVTERAAMSSVTHSFLINTAQRQIATVPANVSSKLETKLYLNHPCSAMTWVVRPLNWNTNAGRRRFSCGFRDRYDFSHKEAGTV--TSALPYGNAISPIANASLSLNGHQRWPVDMPSSYFTNHQPYVHWRTMPATPIMTYSFALEAAQWQPTSTLNFSRLDHVSLGFNFNAELQASEMLVFAEAYNLLVIRDGLGGLRFSN 463
BLAST of jgi.p|Trimin1|161983 vs. uniprot
Match: A0A835Z0V5_9STRA (Putative major capsid protein n=3 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0V5_9STRA) HSP 1 Score: 568 bits (1464), Expect = 5.810e-200 Identity = 279/425 (65.65%), Postives = 347/425 (81.65%), Query Frame = 1 Query: 43 LDDEFQELSTSGFASTSTATISRYGDLVSRITLEIVLPPLSAPDIPDTSAGAPAGALYA--DTGAHYVNCIGFAAWEDCIIEIGGSTVDQLFSDFCFIYEELAGRAGMRLEEAIGRVPFSADVDEDLIEKSTREQTLYVPLPLWFSKYQPATWGLALPIVALSFHEIKLKLKTRSIAECVSVIYKDSAGDWRLSDLAPINATTGTALVNSDMKIRLLVSFVYLDVTERNAMSSVAHSFLINVTQRQVMAVAAGSFSKIENKLFFNHPCSSLLWYMRPLDWNTEGGRRRFSCGYKDRYDFSHQQQGSVDATKGLPWGDAIDAITTASLSLNGHQRWPQDQNSAYFRVLTPYTSWRTMPTTNIYTYSFALQAHDWQPTAHLNFSRYNHVSLGLTFAAGIKASELIAMVESYNLLIIANGLGGLKFSN 1311 +DD+FQELS SGF ++S+ATI+RYGDL+SRITLEI LPPL+AP +P A P YA DT AH+VN IGFA WED +EIGGS VDQL+SDF IYEELAGR G+RLEE+IGRVP+SA+VD DLIEK+ + Q LYVPLPLWFSKYQP+T+GLALPIVAL+FH+++LK+KTRSIA+C V+YK+ W L+DLAP+NA+TGT LVN+D+KIRL+VS VYLD TER AMS+V HSFLIN TQRQV ++AAG ++ E KL+FNHP SSL+W +RPLDWNT+ GRRRFSCG+KDR+DF+ + D+ L +G+A+D I ++SLSLNGHQRWP D S YFR PY +WRT+P+T+IY+YSFAL+A WQPT+HLNFSR +HVSLG +FA GIK+SE + VE+YNLL+I +GLGGL+FSN Sbjct: 1 MDDDFQELSNSGFDTSSSATINRYGDLISRITLEIRLPPLAAPQVPVVPATNPV-TYYASEDTAAHWVNAIGFACWEDVQVEIGGSLVDQLYSDFAMIYEELAGRPGVRLEESIGRVPYSAEVDLDLIEKAQKAQILYVPLPLWFSKYQPSTYGLALPIVALTFHDVRLKIKTRSIADCTCVVYKED-DVWHLTDLAPLNASTGTTLVNADLKIRLMVSSVYLDTTERTAMSTVTHSFLINTTQRQVHSIAAGQSTRQEEKLYFNHPSSSLIWIVRPLDWNTQAGRRRFSCGFKDRFDFTAYEASDDDS---LIYGNAVDPIVSSSLSLNGHQRWPTDMPSTYFRTHVPYCNWRTLPSTSIYSYSFALEASAWQPTSHLNFSRLDHVSLGWSFAPGIKSSEAFSFVEAYNLLVIRDGLGGLRFSN 420
BLAST of jgi.p|Trimin1|161983 vs. uniprot
Match: Q6XLY6_9PHYC (FirrV-1-B50 n=2 Tax=root TaxID=1 RepID=Q6XLY6_9PHYC) HSP 1 Score: 362 bits (929), Expect = 1.180e-118 Identity = 195/445 (43.82%), Postives = 281/445 (63.15%), Query Frame = 1 Query: 1 TIWKSVHTRFTSCALDDEFQELS--TSGFASTSTATISRYGDLVSRITLEIVLPPLSAP-DIPDTSAGAPAGALYADTGAHYVNCIGFAAWEDCIIEIGGSTVDQLFSDFCFIYEELAGRAGMRLEEAIGRVPFSADVDEDLIEKSTREQTLYVPLPLWFSKYQPATWGLALPIVALSFHEIKLKLKTRSIAECVSVIYKD---SAGDWRL--SDLAPINATTGTALVNSDMKIRLLVSFVYLDVTERNAMSSVAHSFLINVTQRQVMAVAAGSFSKIENKLFFNHPCSSLLWYMRPLDWNTEGGRRRFSCGYKDRYDFSHQQQGSVDATKGLPWGDAIDAITTASLSLNGHQRWPQDQNSAYFRVLTPYTSWRTMPTTNIYTYSFALQAHDWQPTAHLNFSRYNHVSLGLTFAAGIKASELIAMVESYNLLIIANGLGGLKFSN 1311 T++K+VH RFTS A D E + S T GF +ATISRYGDLV+ + +EI LPP+ A ++ D S A A D A++VN IGFA + IEIGG+ VD L+ ++ F +EE+ R G RL E IG+ +SADV+ED+IE + + +TLYVPLP WF+KY GL++P++AL++HEIK+K+ R ++EC V+Y+ + G++ P+N+T+G+ LV+SDM +LLVS+VYLD ER+A ++ H++LI TQRQ+ A+ + S + KL+FNHP + L W++RP DW T RRR+S G+ D +D+S + V WGD D + TASL+LNGH R+P + +FR P W +Y +SF+LQ WQPT+ LN SR +HV L L + I S + ESYNLL++ G+GG+++SN Sbjct: 2 TLFKTVHRRFTSFAEDLEENDFSAGTVGFGQKVSATISRYGDLVTDMFMEIHLPPIEAAVNVTDASGNTVADA---DKAAYWVNAIGFALISEVQIEIGGTEVDILYPEWMFFWEEMTQRPGARLGEQIGKFTYSADVEEDMIEFAQQARTLYVPLPFWFNKYFMEA-GLSIPLIALTYHEIKVKVTFRPLSECCCVVYRTEDPTHGEYYALAEGKVPVNSTSGSTLVSSDMDAKLLVSYVYLDKKERDAFATTEHTYLITTTQRQMHAITSAGSSSDQIKLYFNHPSNCLTWFVRPTDWMTN--RRRYSVGHMDLFDYSLKSTSDVSV-----WGDVTDPVKTASLTLNGHSRFPDNMPGLFFRQTQPIMKWPNCSNGYMYVFSFSLQGGSWQPTSTLNMSRIDHVQLELKYGTSIPTSNVFVFAESYNLLVVKEGMGGVRYSN 435
BLAST of jgi.p|Trimin1|161983 vs. uniprot
Match: B5LWE8_9PHYC (Putative major capsid protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWE8_9PHYC) HSP 1 Score: 360 bits (925), Expect = 4.740e-118 Identity = 190/444 (42.79%), Postives = 279/444 (62.84%), Query Frame = 1 Query: 1 TIWKSVHTRFTSCALDDEFQELS--TSGFASTSTATISRYGDLVSRITLEIVLPPLSAPDIPDTSAGAPAGALYADTGAHYVNCIGFAAWEDCIIEIGGSTVDQLFSDFCFIYEELAGRAGMRLEEAIGRVPFSADVDEDLIEKSTREQTLYVPLPLWFSKYQPATWGLALPIVALSFHEIKLKLKTRSIAECVSVIYK---DSAGDW--RLSDLAPINATTGTALVNSDMKIRLLVSFVYLDVTERNAMSSVAHSFLINVTQRQVMAVAAGSFSKIENKLFFNHPCSSLLWYMRPLDWNTEGGRRRFSCGYKDRYDFSHQQQGSVDATKGLPWGDAIDAITTASLSLNGHQRWPQDQNSAYFRVLTPYTSWRTMPTTNIYTYSFALQAHDWQPTAHLNFSRYNHVSLGLTFAAGIKASELIAMVESYNLLIIANGLGGLKFSN 1311 T++K+VH R+TS A D E + S T GF +A +SRYGDLV+ + +E+ LPP+ A + G AD A++VN IG+A + IEIGG+ VD L+ ++ F +E + R G RL E IG+ +SADV+ED+IE + + +TLYVPLP WF+KY T GL++P++AL++HEIK+K+ R ++EC V+Y+ ++ G++ P+N T+G+ LV+SDM +LL+S+VYLD ER+A +S HS+LI TQRQ+ A+ + + + KL+FNHP + L W++RP DW T RRRFS G+ D +DFS V WGD ID + +ASL+LNGH R+P +FR P W +Y +SF+LQ WQPT+ LN SR +HV L L + + I S++ ESYNLL++ +G+GG+++SN Sbjct: 2 TLFKTVHKRYTSFAEDLEENDFSAGTVGFGQKVSANVSRYGDLVTDMFMEVALPPIEAAATVTNAEGVEVAD--ADKAAYWVNAIGYALISEIQIEIGGTEVDTLYPEWMFFWESMTQRPGARLGEQIGKFAYSADVEEDMIEFAQQARTLYVPLPFWFNKYFMET-GLSIPLIALTYHEIKVKVTFRPLSECCCVVYRAEDETHGEYFALAEGKTPVNTTSGSTLVSSDMDAKLLISYVYLDKAERDAFASTEHSYLITRTQRQLHAITSAGSASDQIKLYFNHPSNCLAWFVRPTDWTTN--RRRFSVGHMDSFDFSLHTDSDVSV-----WGDVIDPVKSASLNLNGHSRFPDGMPGLFFRQTQPIMKWPNCSDGFMYVFSFSLQGGAWQPTSTLNMSRIDHVQLELKYGSNIPTSDVFVFAESYNLLVVKDGMGGVRYSN 435
BLAST of jgi.p|Trimin1|161983 vs. uniprot
Match: Q8QNG3_ESV1K (EsV-1-116 n=4 Tax=root TaxID=1 RepID=Q8QNG3_ESV1K) HSP 1 Score: 357 bits (917), Expect = 2.790e-116 Identity = 194/442 (43.89%), Postives = 279/442 (63.12%), Query Frame = 1 Query: 1 TIWKSVHTRFTSCALDDEFQELS--TSGFASTSTATISRYGDLVSRITLEIVLPPLSAPDIPDTSAGAPAGALYADTGAHYVNCIGFAAWEDCIIEIGGSTVDQLFSDFCFIYEELAGRAGMRLEEAIGRVPFSADVDEDLIEKSTREQTLYVPLPLWFSKYQPATW---GLALPIVALSFHEIKLKLKTRSIAECVSVIYKDSAGDWR-----LSDLAPINATTGTALVNSDMKIRLLVSFVYLDVTERNAMSSVAHSFLINVTQRQVMAVAAGSFSKIENKLFFNHPCSSLLWYMRPLDWNTEGGRRRFSCGYKDRYDFSHQQQGSVDATKGLPWGDAIDAITTASLSLNGHQRWPQDQNSAYFRVLTPYTSWRTMPTTNIYTYSFALQAHDWQPTAHLNFSRYNHVSLGLTFAAGIKASELIAMVESYNLLIIANGLGG 1296 T++KS H R+T+ A D E + S T GF +A +SRYGDLVS + LE+ LP + A + AG AD A++VN IG+A + IEIGG+ VD L+S++ F++EEL R G RL E IG+ +SADV+ED+IE +++E+ LYVPLP WF+KY W GL++P++AL++HEIK+K+ R +A+C +V+Y++S W +D PIN + +A+ SDM RLLVS+VYLD ER A +SV H +LI TQRQ+ ++ + S + KL+FNHP ++L+W++RP D+ RRRFS G+KD +DFS Q++ DAT + WGD D++ +ASL+LNGH R+P +FR + P W P Y ++FA W PT+ LN SR +HV L L + I S++I E+YNLL+I G+GG Sbjct: 2 TLFKSQHKRYTNFAEDFEENDFSAGTVGFGQRVSANVSRYGDLVSDVLLEVTLPAIQASESVVNGAGTEVAD--ADKAAYWVNAIGYAIISEVEIEIGGTEVDTLYSEWMFLWEELTQRPGARLGEQIGKFAYSADVEEDMIEFASQERKLYVPLPFWFNKY----WMEHGLSIPLIALTYHEIKIKVSFRPLADCCAVVYRESDPTWGDYWALAADKIPINTASASAMAASDMDARLLVSYVYLDQEERQAFASVQHEYLITTTQRQMHSITSASAKSDQLKLYFNHPSNALIWFVRPTDFKNL--RRRFSVGHKDMFDFSLQKE---DATVSM-WGDVTDSVASASLTLNGHSRFPDSLPGLFFRQVQPALKWPNTPAGYTYLFTFAALGGVWNPTSTLNMSRIDHVQLELKYGDNIPTSDVIVFNEAYNLLVIKEGMGG 431
BLAST of jgi.p|Trimin1|161983 vs. uniprot
Match: Q4H484_HAV01 (Hypothetical major capsid protein n=1 Tax=Heterosigma akashiwo virus 01 TaxID=97195 RepID=Q4H484_HAV01) HSP 1 Score: 179 bits (453), Expect = 9.250e-48 Identity = 140/454 (30.84%), Postives = 229/454 (50.44%), Query Frame = 1 Query: 1 TIWKSVHTRFTSCALDDEFQELS-TSGFASTSTATISRYGDLVSRITLEIVLPPLSAPDIPDTSAGAPAGALYADTGAHYVNCIGFAAWEDCIIEIGGSTVDQLFSDFCFIYEELAGRAGMR--LEEAIGRVPFSADVDEDLIEKSTREQTLYVPLPLWFSKYQPATWGLALPIVALSFHEIKLKLKTRSIAECVSVIYKDSAGDWRLSDLAPINATTGTALVNSDMKIRLLVSFVYLDVTERNAMSSVAHSFLINVTQRQVMAVAAGSFSKIENKLF--FNHPCSSLLWYMRPLDWNTEGGRRRFSCGYKDRYDFSHQQQGSVDATKGLPWGDAIDAITTASLSLNGHQRWPQDQNSAYFRVLTPYTSWRTMPTTNIYTYSFALQAHDWQPTAHLNFSRYNHVSL-----GLTFAAGI-------KASELIAMVESYNLLIIANGLGGLKFSN 1311 T +K V+ R T+ A++ Q + T+ F T TISR GDL++ + L++ LP LS + ++G+P T + N IG A + +EIGG +D+ F + I++EL + + IG+ +++++ LI S E+ Y+PL WF + GL+LP+VAL +HE+K+ ++ R+ EC+ V K + + D A TT T + N+ +L V ++YLD ER ++ +H +L+ Q Q + SFS+ KL FNHP LLW ++ + +T G Y D ++FS G+ + A+D + A L LNGH+R+ + YFR++ PY +P +IY YSFA++ + QP+ NFSR + V L L+ GI ++ +YN+L I +G+ GL ++N Sbjct: 25 TFFKVVYRRHTNFAIESIEQTFNGTADFGKKVTCTISRNGDLINHVYLQVQLPSLSTGLV---ASGSP-------TYVSWTNAIGHALIRNVEVEIGGQRIDRQFGTWLEIWDELTMTTEKKNGYNQMIGK--YASELG--LIGNSYYERIYYIPLQFWFCRNP----GLSLPLVALQYHEVKIIIEFRNAHECI-VALKANGDRVAIGDNATTFTTTPT-ITNA----QLYVDYIYLDTNERKLFAATSHEYLVE--QLQFTGAESLSFSQQNQKLRLNFNHPVKELLWVLQRDENSTSAG-----TAYNDWFNFSAAAPGTPSPSH------AVDLLADAKLLLNGHERFTV-RPQTYFRLVQPYQHHTRIPDKHIYLYSFAIRPEEHQPSGTCNFSRIDTVQLVYDLTSLSTLTGIGTGMDTASTGQISVFAVNYNVLRIVSGMAGLAYAN 440 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|161983 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_1454 ID=mRNA_1454|Name=jgi.p|Trimin1|161983|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1314bp|location=Sequence derived from alignment at Contig_18:1094238..1095969+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ACGATATGGAAAAGCGTGCACACACGCTTCACTTCCTGCGCTCTAGATGAback to top protein sequence of jgi.p|Trimin1|161983 >Trimin1|161983|e_gw1.18.342.1 ID=Trimin1|161983|e_gw1.18.342.1|Name=jgi.p|Trimin1|161983|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=438bp TIWKSVHTRFTSCALDDEFQELSTSGFASTSTATISRYGDLVSRITLEIVback to top mRNA from alignment at Contig_18:1094238..1095969+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_1454 ID=mRNA_1454|Name=jgi.p|Trimin1|161983|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1732bp|location=Sequence derived from alignment at Contig_18:1094238..1095969+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_18:1094238..1095969+ >mRNA_1454 ID=mRNA_1454|Name=jgi.p|Trimin1|161983|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1314bp|location=Sequence derived from alignment at Contig_18:1094238..1095969+ (Tribonema minus UTEX_B_3156 )back to top |