mRNA_14546 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|353190 vs. uniprot
Match: A0A835Z7P9_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7P9_9STRA) HSP 1 Score: 752 bits (1942), Expect = 6.160e-272 Identity = 378/378 (100.00%), Postives = 378/378 (100.00%), Query Frame = 1 Query: 1 MVALACVCAESAMVALWRARLLLLVPGTAQAVLSAFDKQGAYTGMCILLQHGIAGRLRVATPDIFGCNPLDFTLDEAVGKTDMPVVALISRSLQSNMAKDPGSCTFAQKVDNAWRAGAALAVVFDYVDEPLFRMQRATGGPVDSAKIPSVLISASSGRVLHALATACADPLGPRVFVDASDPYEKMFESLNMTMIGVVCGFLTSLLACASLFLCTSHRLLRRYDAIGGHGRPPRPLSLAQALRMPEKSVTCGCGLEKDSCAICLEAYRVGDKVMHLNCGHVLHAHCLRPWLAVSIAGIATAQRPERQRTCPLCKGDVTDPPPTPSLSRPSSLQGSSIRLVPSPVQPAHDTSRAAPPDAAARHDDSGGIAVEEGLRQGM 1134 MVALACVCAESAMVALWRARLLLLVPGTAQAVLSAFDKQGAYTGMCILLQHGIAGRLRVATPDIFGCNPLDFTLDEAVGKTDMPVVALISRSLQSNMAKDPGSCTFAQKVDNAWRAGAALAVVFDYVDEPLFRMQRATGGPVDSAKIPSVLISASSGRVLHALATACADPLGPRVFVDASDPYEKMFESLNMTMIGVVCGFLTSLLACASLFLCTSHRLLRRYDAIGGHGRPPRPLSLAQALRMPEKSVTCGCGLEKDSCAICLEAYRVGDKVMHLNCGHVLHAHCLRPWLAVSIAGIATAQRPERQRTCPLCKGDVTDPPPTPSLSRPSSLQGSSIRLVPSPVQPAHDTSRAAPPDAAARHDDSGGIAVEEGLRQGM Sbjct: 1 MVALACVCAESAMVALWRARLLLLVPGTAQAVLSAFDKQGAYTGMCILLQHGIAGRLRVATPDIFGCNPLDFTLDEAVGKTDMPVVALISRSLQSNMAKDPGSCTFAQKVDNAWRAGAALAVVFDYVDEPLFRMQRATGGPVDSAKIPSVLISASSGRVLHALATACADPLGPRVFVDASDPYEKMFESLNMTMIGVVCGFLTSLLACASLFLCTSHRLLRRYDAIGGHGRPPRPLSLAQALRMPEKSVTCGCGLEKDSCAICLEAYRVGDKVMHLNCGHVLHAHCLRPWLAVSIAGIATAQRPERQRTCPLCKGDVTDPPPTPSLSRPSSLQGSSIRLVPSPVQPAHDTSRAAPPDAAARHDDSGGIAVEEGLRQGM 378
BLAST of jgi.p|Trimin1|353190 vs. uniprot
Match: A0A6H5L263_9PHAE (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L263_9PHAE) HSP 1 Score: 193 bits (490), Expect = 3.390e-52 Identity = 121/299 (40.47%), Postives = 166/299 (55.52%), Query Frame = 1 Query: 229 AVGKTDMPVVALISRSLQSNMAKDPGSCTFAQKVDNAWRAGAALAVVFDYVDEPLFRMQRAT--GGPVDSAKIPSVLISASSGRVLHALATACADPLGPRVFVDASDPYEKMFESLNMTMIGVVCGFLTSLLACASLFLCTSHRLLRRYDAIGGHGRPPRPLSLAQALRMPEKSVTCGCGLEKDSCAICLEAYRVGDKVMHLNCGHVLHAHCLRPWLAVSIAGIATAQRPERQRTCPLCKGDVT-----DPPPTPSLSRPSSLQGSSIRLVPSP-VQPAHDTSRAAPPDAAARHDDSGG 1101 A G+ D+P ALISRS + DP CTF KV NA AG ++ +V+D +E LF+M R++ G +IP VL+S +SG L AL +D GP V+VD +DP+ MF ++++TM +V GFL +LL C S+ + T HR LRRY+++ RP+SL + L++PE V G LE DSC +CLEAYR+GDK+ L C H HA C+ PWL +RQR+CP+CK VT PP + S S ++ +P +QPAH D R DD G Sbjct: 149 AAGEEDLPSAALISRSEKD----DPSGCTFETKVLNAQGAGFSMVIVYDSREENLFKMGRSSSKGAKHPKVEIPLVLVSHASGLALKALIETASDTRGPEVYVDNTDPF-GMFVTVDLTMFMLVTGFLLALLTCGSMMVVTLHRYLRRYESLVAGTN--RPMSLPEVLQLPEVRVEEGSRLEGDSCPVCLEAYRIGDKLRSLPCQHAFHAGCITPWLT------------QRQRSCPMCKDPVTLTVGLAPPTSSSPSSXXXXXXXXAAVITAPAMQPAHA-------DGVERGDDGAG 421
BLAST of jgi.p|Trimin1|353190 vs. uniprot
Match: A0A836C717_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C717_9STRA) HSP 1 Score: 160 bits (406), Expect = 4.340e-41 Identity = 131/379 (34.56%), Postives = 162/379 (42.74%), Query Frame = 1 Query: 61 LLLLVPGTAQAVLSAFDKQGAYT-------GMCILLQHGIAGRLRVATPDIFGCNPLDFTLDEAVGKTDMPV----VALISRSLQSNMAKDPGSCTFAQKVDNAWRAGAALAVVFDYVDEPLFRMQRATGGPVDSAKIPSVLISASSGRVLHALATACADPLGPRVFVDASDPYEKMFESLNMTMIGVVCGFLTSLLACASLFLCTSHRLLRRYDAIGGHGRPPRPLSLAQALRMPEKSVTCGCGLEKDSC----------------------------------AICLEAYRVGDKVMHLNCGHVLHAHCLRPWLAVSIAGIATAQRPERQRTCPLCKGDVTDPPPTPSLSRPSSLQGSSIRLVPSPVQPAHDTSRAA 1062 LL LV A A L A+D+ G +T GI GRLRVA PDIFGC PLD + TDM I L ++ KDP +C+FA KV V+VD +DPYE++F SLNMTM+ VV FL +LL CASLFLC+S RLL R +A R RPLSLAQA R+PE V G LEKD +ICLE Y VG++++ L C HV+H C+ PW++ ERQRTCPLCK +V PPP L PSS +S R+ P P +R+A Sbjct: 8 LLCLVCHLATASLVAYDENGGFTVPPSTTSTTLTCCPQGITGRLRVAKPDIFGCAPLDLSAPGDEDYTDMESGLRPALPIVVLLSRSLPKDPAACSFATKV----------------------------------------------------------------VYVDNTDPYEQLFFSLNMTMVAVVTTFLLALLLCASLFLCSSERLLGRREAAL---RSTRPLSLAQAARLPEVVVAAGGDLEKDRSEKIMIALNGSAQRLKVCCGTVXXXXXXXXXXXXXSICLEDYTVGERLVRLTCAHVMHRACVLPWIS------------ERQRTCPLCKTEVVPPPP---LRTPSSA--ASQRIFPYTYVPPLQANRSA 302
BLAST of jgi.p|Trimin1|353190 vs. uniprot
Match: A0A0K9RHC9_SPIOL (RING-type domain-containing protein n=2 Tax=Spinacia oleracea TaxID=3562 RepID=A0A0K9RHC9_SPIOL) HSP 1 Score: 85.5 bits (210), Expect = 3.490e-14 Identity = 93/302 (30.79%), Postives = 127/302 (42.05%), Query Frame = 1 Query: 151 HGIAGRLRVATPDIFGCNPLDFTLDEAVGKTDMPVVALISRSLQSNMAKDPGSCTFAQKVDNAWRAGAALAVVFDYVDEPLFRMQRATGGPVDSAKIPSVLISASSGRVLHALATACADPLGPRVFVDASDPYEKMFESLNMTMIGVVCGFLTSLLACASLFLC---TSHRLLR---RYDAIGGHGRPPRPLSLAQAL---RMPEKSVTCGCGLEKDSCAICLEAYRVGDKVMHLNCGHVLHAHCLRPWLAVSIAGIATAQRPERQRTCPLCKGDVT----DPPP---TPSLS-RPSSLQGS 1005 HG+ G+L +A P I GC+ L +++ VG P+ ALI R G C+F K+ A AG A+++D D A G KIP+V +S ++G + GP V V YE S+ + F++ L A L C HR+ R R HG R + +L + E++ T +CAICLE YRVGDK+ L C H H C+ WL T+ R CP+CK D +PP TP LS PSS S Sbjct: 35 HGMCGKLYIAEP-IDGCSQLRNRVEDVVGNCSSPI-ALIVR----------GGCSFEDKIRRAQNAGFEAAIIYDNEDVGSLV---AMAGNSAGIKIPAVFVSKATGNKIKTYGA------GPDVEVWILASYESSAWSI------MAISFISLLAMSAVLATCFFVRRHRIRRERPRARVREFHGMSSRLVKAMPSLVFTTVTEENCTAS------TCAICLEDYRVGDKIRILPCRHKFHTFCVDAWL--------TSWR----TFCPVCKRDARTSNGEPPASESTPLLSSNPSSAASS 291
BLAST of jgi.p|Trimin1|353190 vs. uniprot
Match: A0A4Z2DTX1_SCHJA (E3 ubiquitin-protein ligase RNF13 isoform 2 n=3 Tax=Schistosoma japonicum TaxID=6182 RepID=A0A4Z2DTX1_SCHJA) HSP 1 Score: 84.3 bits (207), Expect = 1.020e-13 Identity = 79/291 (27.15%), Postives = 127/291 (43.64%), Query Frame = 1 Query: 100 SAFDKQGAYTGMCILLQHGIAGRLRVATPDIFGCNPLDFTLDEAVGKTDMPVVALISRSLQSNMAKDPGSCTFAQKVDNAWRAGAALAVVFDYVDEPLFRMQRATGGPVDSAKIPSVLISASSGRVLHALATACADPLGPRVFVDASDPYEKMFESLNMTMIGVVCGFLTSLLACASLF---LCTSHRLLRRYDAIGGHGRPPRPLSLAQALRMPEKSVTCGCGLEKDSCAICLEAYRVGDKVMHLNCGHVLHAHCLRPWLAVSIAGIATAQRPERQRTCPLCKGDVTDPP 963 S F+ A G I + GR+ + P I GC L + + +P ++LI R G+C+F++K A R G A++F+ D+ F M T ++ I +V++ S G +L L C P FV+ + + S+ + +I ++ L S++A + + L HR RRY L + + ++PE G E ++C ICLE Y+ GDK+ L C H H+ C+ PWL R+ CP+CK V + P Sbjct: 34 SEFEDSEALFGNVITQGSLLLGRIHASQP-INGCVDR-IPLPKNASASTLPYISLIKR----------GNCSFSRKTIAAERGGYIAAIIFNDEDDSTFPMGHNTSEVIN---ISAVMVGLSDGELL--LKKYCV----PHYFVEILSAHRR---SIMLYLIPLITCLLLSIIALSVAYCIRLWDRHRRRRRYC-----------LPVKELHKIPETLFKEGSS-EFETCVICLEDYKDGDKLRLLPCRHAYHSKCVDPWLL------------RRRGCCPICKKKVHNRP 276
BLAST of jgi.p|Trimin1|353190 vs. uniprot
Match: A0A8B9ARK4_PHODC (receptor homology region, transmembrane domain- and RING domain-containing protein 1-like isoform X1 n=2 Tax=Phoenix dactylifera TaxID=42345 RepID=A0A8B9ARK4_PHODC) HSP 1 Score: 81.6 bits (200), Expect = 1.690e-13 Identity = 100/322 (31.06%), Postives = 129/322 (40.06%), Query Frame = 1 Query: 100 SAFDKQGAYTGMCILLQHGIAGRLRVATPDIFGCNPLDFTLDEAVGKTDMPVVALISRSLQSNMAKDPGSCTFAQKVDNAWRAGAALAVVFDYVDEPLFRMQRATGGPVDSAKIPSVLISASSGRVLHALATACADPLG--PRV-----FVDASDPYEKMFESLNMTMIGV-VCGFLTSLLACASLFLCTSHRLLRRYDAIGGHGRPPRPLSLAQALRMPEKSVTCGCGLEKDSCAICLEAYRVGDKVMHLNCGHVLHAHCLRPWLAVSIAGIATAQRPERQRTCPLCKGD-------VTDPPPTPSLSRPSSLQGSSIRLV 1020 S F + GA ++ + G +G + A P + C PL+ V ALI R G C F +KV NA AG A+++D D PL A GG D IP+V +S +SG L A L PR F+ A F SL T+IG+ VC LF+ H R A HG R + +L S +CAICLE Y+VG+K+ L C H HA C+ WL TA R CP+CK D + TP LS SS SS R + Sbjct: 9 SLFSRLGAP----VVRRSGESGVMYPAEP-LDACTPLN----NKVVNDSRSSFALIIR----------GGCHFDEKVRNAQNAGFKAAIMYDNEDHPLVF---AIGGSPDGITIPAVFVSKASGEALRKYAGLTDMELWILPRTKNLEWFIMAIS-----FISLLATVIGLAVC-----------LFVHRQHGRHERSRASEIHGMSSRLVEAMPSLIFISASED---NCTSQTCAICLEDYKVGEKLRRLPCHHKFHAVCVDSWL--------TAWR----SFCPMCKQDCNSSTIYIPASESTPLLSSISSFPSSSARSL 277
BLAST of jgi.p|Trimin1|353190 vs. uniprot
Match: A0A430Q2G7_SCHBO (E3 ubiquitin-protein ligase RNF13 n=3 Tax=Schistosoma TaxID=6181 RepID=A0A430Q2G7_SCHBO) HSP 1 Score: 83.2 bits (204), Expect = 2.350e-13 Identity = 76/264 (28.79%), Postives = 118/264 (44.70%), Query Frame = 1 Query: 190 IFGCNPLDFTLDEAVGKTD-----MPVVALISRSLQSNMAKDPGSCTFAQKVDNAWRAGAALAVVFDYVDEPLFRMQRATGGPVDSAKIPSVLISASSGRVLHALATACADPLGPRVFVDASDPYEKMFESLNMTMIGVVCGFLTSLLACASLFLCTSHRLLRRYDAIGGHGRPPRPL-SLAQALRMPEKSVTCGCGLEKDSCAICLEAYRVGDKVMHLNCGHVLHAHCLRPWLAVSIAGIATAQRPERQRTCPLCKGDVTDPP 963 I+ PL +D+ D +P ++LI R G C+F K A R G V+F+ VD+ F M + V IP V++ S G++L L C P FV+ + + S+ + +I ++ L S++A L + RLL RY + P + L + + L + + S E ++CAICLE Y+ GDK+ L CGH H+ C+ PWL +R+ CP+CK V + P Sbjct: 56 IYASKPLKGCVDQIPKPKDDHNSTLPYISLIKR----------GDCSFVDKALAAERGGYIATVIFNDVDDSTFPMGYNSSTNVS---IPVVMVGLSDGKLL--LDKYCV----PHYFVEILPAHRR---SIVLYLIPLITCLLISVVA---LSVAYGIRLLNRYRRRYRYCLPVKELRKIPETLFVKDSS-------EFETCAICLEDYKDGDKLRVLPCGHAYHSKCVDPWLL------------KRRGFCPICKKKVRNRP 275
BLAST of jgi.p|Trimin1|353190 vs. uniprot
Match: A0A6J0ML59_RAPSA (receptor homology region, transmembrane domain- and RING domain-containing protein 4-like n=2 Tax=Raphanus sativus TaxID=3726 RepID=A0A6J0ML59_RAPSA) HSP 1 Score: 82.4 bits (202), Expect = 3.840e-13 Identity = 106/367 (28.88%), Postives = 148/367 (40.33%), Query Frame = 1 Query: 64 LLLVPGTAQAV---------LSAFDKQGAYTGMCILLQHGIAGRLRVATPDIFGCNPLDFTLD-EAVGKTDMPVVALISRSLQSNMAKDPGSCTFAQKVDNAWRAGAALAVVFDYVDEPLFRMQRATGGPVDSAKIPSVLISASSGRVLHALA--TACADPLGPRVFVDASDPYEKMFESLNMTMIGVVCGFLTSLLACASLFLCTSHRLLRRYDAIGGHGRPPRPLSLAQALRMPEK--SVTCGCGLEKDSCAICLEAYRVGDKVMHLNCGHVLHAHCLRPWLAVSIAGIATAQRPERQRTCPLCKGDVT----DPPPTPS----LSRPSSLQGSSIRLVPSPVQPAHDTSRAAPPDAAARHDDSG 1098 LLL+P A A LS D + +T M + + G L VA P + C+ L T+ G P LI R G C+F +K+ NA +AG A+V++ D F + A G P I +S S+G +L A T L P A F SL + M V+ A+ F HR+ RR + G G R + + RMP + C SC IC+E YR+G+K+ L C H HA C+ WL +R+ CP+CK D + PP+PS L PS SS L SP + +S PP ++ +G Sbjct: 11 LLLIPHLASAKIMLIGKNTSLSFDDIEADFTPM--IKKSDQCGVLYVAEP-LDACSDLVNTVSIPEEGSITSPSYVLIIR----------GGCSFEEKIRNAQKAGYKAAIVYNNEDYGFFLISMA-GNP-SGVVIYGTFVSKSTGEILKGYAGRTDMELWLAPSFETSAWSIMAISFISL-LAMSAVL----------ATCFFVRRHRIRRRRVRLMGGGEFAR-MGIDSIRRMPTTVFNGVCEEASTSISCVICIEDYRIGEKLRILPCNHKFHAKCVDLWLG------------QRRSFCPVCKRDARTININMPPSPSERTPLLSPSVTPTSSFLLSSSPSTSSVQSSYDIPPSSSTMQLQTG 338
BLAST of jgi.p|Trimin1|353190 vs. uniprot
Match: A0A7C9AUE2_OPUST (RING-type domain-containing protein n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9AUE2_OPUST) HSP 1 Score: 82.4 bits (202), Expect = 4.080e-13 Identity = 95/306 (31.05%), Postives = 130/306 (42.48%), Query Frame = 1 Query: 154 GIAGRLRVATPDIFGCNPLDFTLDEAVGKTDMPVVALISRSLQSNMAKDPGSCTFAQKVDNAWRAGAALAVVFDYVDE-PLFRMQRATGGPVDSAKIPSVLISASSGRVLHALATACADPLGPRVFVDASDPYEKMFESLNMTMIGVVCGFLTSLLACASLFLCTSHRLLR-RYDAIGGHGRPPRPLSLAQALRMPEKSVTCGC--GLEKDSCAICLEAYRVGDKVMHLNCGHVLHAHCLRPWLAV---------SIAGIATAQRPERQRTCPLCKGDVTDPPPTPSLSRPSSLQGSSIRLV-PSP 1029 GI G+L +A P + C+PL +++ ALI R G C F KV A +AG A+V+D VD PL M ++ G KI +V +S +SG L + A LG V++ S YE S+ + F++ L A L C R R R + G R +S MP T +CAICLE YRVGDK+ L C H HA C+ WL A +T + P + T PL + + TP S SS+ S+I + PSP Sbjct: 54 GICGKLYIAEP-LDACSPLMNKIEQNNSGNCTSPFALIIR----------GVCGFEDKVRRAQKAGFETAIVYDNVDNSPLVAMAGSSAG----IKIHAVFVSKASGERLKSNAG-----LGAEVWIIPS--YENSAWSI------MAISFISLLAMSAVLATCFFVRRNRIRRERPQGRVREFHGMSSCLVKAMPSLIFTAVTDDNCTSSTCAICLEDYRVGDKLRILPCSHKFHAFCVDSWLTTWRTFCPVCKRDARTSTGEPPASEST-PLLSSNPSSAASTPFSSFRSSVHSSAIPIASPSP 330
BLAST of jgi.p|Trimin1|353190 vs. uniprot
Match: D7LXA5_ARALL (Peptidase/ protein binding protein n=1 Tax=Arabidopsis lyrata subsp. lyrata TaxID=81972 RepID=D7LXA5_ARALL) HSP 1 Score: 80.5 bits (197), Expect = 1.700e-12 Identity = 97/346 (28.03%), Postives = 150/346 (43.35%), Query Frame = 1 Query: 55 ARLLLLVPGTAQAVLSAFDKQGAYTGMCILLQHGIAGRLRVATPDIFGCNPLDFTLDEAVGKTDMPVVALISRSLQSNMAKDPGSCTFAQKVDNAWRAGAALAVVFDYVDEPLFRMQRATGGPVDSAKIPSVLISASSGRVLHALATACADPLGPRVFVDASDPYEKMFESLNMTMIGVVCGFLTSLLACASLFLC---TSHRLLRRYD-AIGGHGRPPRPLSLAQALRMPEKSVTCGCGLEKDSCAICLEAYRVGDKVMHLNCGHVLHAHCLRPWLAVSIAGIATAQRPERQRTCPLCKGDVT----DPPP---TPSLSRPSSLQGSSIRLVPS----PVQPAHD 1047 A++LL+ T+ LS D + +T M G G L VA P + C+ L T++ G + P LI R G C+F +K+ NA +AG A+V+DY D + + G I +S ++G VL T A V++ S FE+ +++ + F++ L A L C HR+ RR A+ G+ P ++ + + C SCAIC+E YR+GDK+ L C H H C+ WL +R+ CP+CK D D P TP L+ +S+ +S L+ S P+Q +H+ Sbjct: 20 AKILLIGKNTS---LSFDDIEANFTPMIKRSDQG--GVLYVAEP-LDACSDLVNTVNVKNGSSVPPPYVLIIR----------GGCSFEEKIRNAQKAGYKAAIVYDYED---YGFLVSMAGNPSGVLIYGTFVSKATGEVL----TQYAGRTDFEVWLMPS------FETSAWSIMAI--SFISLLAMSAVLATCFFVRRHRVRRRRILALNGNDFPRMAKNMLKRMPTTIFKGVCDEASTSISCAICIEDYRIGDKLRILPCHHKFHVGCVDLWLG------------QRRSFCPVCKRDARSISIDMPASEHTPLLTPSNSMTPTSSFLLSSSSTTPLQSSHE 322
BLAST of jgi.p|Trimin1|353190 vs. uniprot
Match: A0A835Z965_9STRA (Rab1A, rab family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z965_9STRA) HSP 1 Score: 393 bits (1009), Expect = 6.270e-138 Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 3 Query: 12 MSKRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFGHVNDWLSEVNRYASEGTSKLLIGNKSDRADKAVTTEQAKSFAQSLGIPFLETSAKSASNVEEAFLTMASELIRTREARAAQQAESSGTAATVQLRPGASGGGSSGKCC 629 MSKRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFGHVNDWLSEVNRYASEGTSKLLIGNKSDRADKAVTTEQAKSFAQSLGIPFLETSAKSASNVEEAFLTMASELIRTREARAAQQAESSGTAATVQLRPGASGGGSSGKCC Sbjct: 1 MSKRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFGHVNDWLSEVNRYASEGTSKLLIGNKSDRADKAVTTEQAKSFAQSLGIPFLETSAKSASNVEEAFLTMASELIRTREARAAQQAESSGTAATVQLRPGASGGGSSGKCC 206
BLAST of jgi.p|Trimin1|353190 vs. uniprot
Match: D7G118_ECTSI (Rab1A, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G118_ECTSI) HSP 1 Score: 324 bits (831), Expect = 7.280e-111 Identity = 168/184 (91.30%), Postives = 174/184 (94.57%), Query Frame = 3 Query: 12 MSKRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFGHVNDWLSEVNRYASEGTSKLLIGNKSDRADKAVTTEQAKSFAQSLGIPFLETSAKSASNVEEAFLTMASELIRTREARAAQQAESS 563 MSKRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVT QESF HVNDWLSEVNRYASEGTSKLLIGNKSDR DK V + AK +A+SLGIPFLETSAK+ASNVEEAFLTMASELIRTREARAA Q ++S Sbjct: 1 MSKRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDREDKVVDSAAAKEYAESLGIPFLETSAKNASNVEEAFLTMASELIRTREARAATQVDNS 184
BLAST of jgi.p|Trimin1|353190 vs. uniprot
Match: W7TI50_9STRA (Rab1 family protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TI50_9STRA) HSP 1 Score: 305 bits (781), Expect = 4.090e-103 Identity = 155/178 (87.08%), Postives = 165/178 (92.70%), Query Frame = 3 Query: 12 MSKRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFGHVNDWLSEVNRYASEGTSKLLIGNKSDRADKAVTTEQAKSFAQSLGIPFLETSAKSASNVEEAFLTMASELIRTREARAA 545 MSKRDYD LFKLVLIGD+GVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKT KLQIWDTAGQERFRTITSAYYRGADGIIMVYDVT++ESF H+ DWL+EVNRYASEGT KLL+GNKSDR DK V+TE+AK FA LGIPFLETSAK+ASNVEEAFLTMA ELIR REA+ A Sbjct: 1 MSKRDYDFLFKLVLIGDTGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTFKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTNEESFEHIQDWLNEVNRYASEGTCKLLVGNKSDRPDKVVSTERAKKFADELGIPFLETSAKNASNVEEAFLTMAQELIRLREAKGA 178
BLAST of jgi.p|Trimin1|353190 vs. uniprot
Match: A0A7S3VAP6_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VAP6_9STRA) HSP 1 Score: 301 bits (770), Expect = 1.870e-101 Identity = 162/205 (79.02%), Postives = 171/205 (83.41%), Query Frame = 3 Query: 18 KRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFGHVNDWLSEVNRYASEGTSKLLIGNKSDRA-DKAVTTEQAKSFAQSLGIPFLETSAKSASNVEEAFLTMASELIRTREARAAQQAESSGTAATVQLRPGASGGGSSGKCC 629 K DYD+LFKLVLIGDSGVGKSCLLLRFADDAFT+SYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQ+SF HVNDWL EVNRYASEGT KLL+GNKSDR DK VT EQAK FA +GIPFLETSAKSA+NVEEAFLTMASELI+ R AR ++ G VQL G CC Sbjct: 8 KSDYDYLFKLVLIGDSGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQDSFDHVNDWLKEVNRYASEGTCKLLVGNKSDRTTDKVVTAEQAKEFADDIGIPFLETSAKSAANVEEAFLTMASELIKQRIARGGTAEDADGD--NVQLGGGKRAKEMMSNCC 210
BLAST of jgi.p|Trimin1|353190 vs. uniprot
Match: F0YFR6_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFR6_AURAN) HSP 1 Score: 300 bits (768), Expect = 3.060e-101 Identity = 161/207 (77.78%), Postives = 179/207 (86.47%), Query Frame = 3 Query: 12 MSKRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFGHVNDWLSEVNRYASEGTSKLLIGNKSDRADKAVTTEQAKSFAQSLGIPFLETSAKSASNVEEAFLTMASELIRTREARAAQQAE-SSGTAATVQLRPGASGGGSSGKCC 629 MSKRDYDHLFKLVLIGD+GVGKSCLLLRFADDAFT+SYISTIGVDFRFRTVK+D KTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTS ESF HV+DWL+EVNRYA+EGT KLL+GNK D DK VTTE AK +A LGIPFLETSAK+A+NVEEAFLTMA ELIR REA +Q A+ +G A+ ++L G+S + KCC Sbjct: 1 MSKRDYDHLFKLVLIGDTGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKVDGKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSSESFDHVSDWLTEVNRYANEGTCKLLVGNKCDMEDKVVTTEAAKEYADGLGIPFLETSAKNATNVEEAFLTMAGELIRLREA--SQSAKPGAGGASGLKLSGGSS---RTKKCC 202
BLAST of jgi.p|Trimin1|353190 vs. uniprot
Match: A0A7S2C3M2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C3M2_9STRA) HSP 1 Score: 298 bits (764), Expect = 1.380e-100 Identity = 149/175 (85.14%), Postives = 166/175 (94.86%), Query Frame = 3 Query: 15 SKRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFGHVNDWLSEVNRYASEGTSKLLIGNKSDRADKAVTTEQAKSFAQSLGIPFLETSAKSASNVEEAFLTMASELIRTREAR 539 +KRDYDHLFKLVLIGDSGVGKSCLLLRFAD+AFT+SYISTIGVDFRFRT+K++K TVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESF HV+DWL+EVNRYASEGT KLL+GNKSDRAD AV++E+AK +A+ LGIPFLETSAK+A NVE AFLTMASELI+ R+AR Sbjct: 8 TKRDYDHLFKLVLIGDSGVGKSCLLLRFADNAFTESYISTIGVDFRFRTIKVEKNTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFNHVSDWLTEVNRYASEGTCKLLVGNKSDRADWAVSSEEAKVYAEKLGIPFLETSAKNAENVETAFLTMASELIKIRQAR 182
BLAST of jgi.p|Trimin1|353190 vs. uniprot
Match: A0A7S1GR15_CYCTE (Hypothetical protein n=2 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GR15_CYCTE) HSP 1 Score: 296 bits (759), Expect = 9.140e-100 Identity = 154/175 (88.00%), Postives = 161/175 (92.00%), Query Frame = 3 Query: 18 KRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFGHVNDWLSEVNRYASEGTSKLLIGNKSDR-ADKAVTTEQAKSFAQSLGIPFLETSAKSASNVEEAFLTMASELIRTREAR 539 +RDYD+LFKLVLIGDSGVGKSCLLLRFADDAFT+SYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTS ESF HVNDWL EVNRYA+EGT KLL+GNKSDR ADK VT E+AK FA LGI FLETSAKSA NVEEAFLTMA ELIR R+AR Sbjct: 12 QRDYDYLFKLVLIGDSGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSSESFDHVNDWLKEVNRYAAEGTVKLLVGNKSDRVADKVVTEEKAKEFADELGIAFLETSAKSAKNVEEAFLTMAGELIRQRDAR 186
BLAST of jgi.p|Trimin1|353190 vs. uniprot
Match: B7FVL6_PHATC (Predicted protein n=5 Tax=Bacillariophycidae TaxID=33850 RepID=B7FVL6_PHATC) HSP 1 Score: 295 bits (755), Expect = 3.350e-99 Identity = 152/177 (85.88%), Postives = 163/177 (92.09%), Query Frame = 3 Query: 18 KRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFGHVNDWLSEVNRYASEGTSKLLIGNKSDR-ADKAVTTEQAKSFAQSLGIPFLETSAKSASNVEEAFLTMASELIRTREARAA 545 +RDYD+LFKLVLIGDSGVGKSCLLLRFADDAFT+SYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMV+DVTS +SF HVNDWL EVNRYA+EGT KLL+GNKSDR AD+ VT EQA+ FA LGIPF+ETSAKSA NVEEAFLTMA ELIR R AR+A Sbjct: 9 QRDYDYLFKLVLIGDSGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVFDVTSTDSFDHVNDWLKEVNRYAAEGTVKLLVGNKSDRTADRVVTEEQAREFADELGIPFIETSAKSAKNVEEAFLTMAGELIRQRAARSA 185
BLAST of jgi.p|Trimin1|353190 vs. uniprot
Match: A0A7S4JIY9_9STRA (Hypothetical protein n=2 Tax=Eupodiscales TaxID=33838 RepID=A0A7S4JIY9_9STRA) HSP 1 Score: 295 bits (755), Expect = 1.270e-98 Identity = 153/176 (86.93%), Postives = 161/176 (91.48%), Query Frame = 3 Query: 15 SKRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFGHVNDWLSEVNRYASEGTSKLLIGNKSDR-ADKAVTTEQAKSFAQSLGIPFLETSAKSASNVEEAFLTMASELIRTREAR 539 +KRDYD+LFKLVLIGDSGVGKSCLLLRFADDAFT+SYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGII+VYDVTS +SF HVNDWL EVNRYASEGT KLLIGNKSDR +DK V E+AK FA LGI FLETSAKSA NVEEAFLTMA ELI+ REAR Sbjct: 45 NKRDYDYLFKLVLIGDSGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIILVYDVTSADSFDHVNDWLKEVNRYASEGTCKLLIGNKSDRTSDKVVAAEKAKEFADELGIAFLETSAKSAKNVEEAFLTMAGELIKQREAR 220
BLAST of jgi.p|Trimin1|353190 vs. uniprot
Match: A0A1Z5J904_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J904_FISSO) HSP 1 Score: 293 bits (751), Expect = 1.360e-98 Identity = 152/184 (82.61%), Postives = 164/184 (89.13%), Query Frame = 3 Query: 18 KRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFGHVNDWLSEVNRYASEGTSKLLIGNKSDR-ADKAVTTEQAKSFAQSLGIPFLETSAKSASNVEEAFLTMASELIRTREARAAQQAESSG 566 +RDYD+LFKLVLIGDSGVGKSCLLLRFADDAFT+SYISTIGVDFRFRTVK+DKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMV+DVTS ESF HVNDWL EVNRYA+EGT KLL+GNKSDR AD+ VTTEQA+ FA LGIP++ETSAKSA NVEEAFLTMA ELIR R A + E G Sbjct: 9 QRDYDYLFKLVLIGDSGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKLDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVFDVTSTESFDHVNDWLKEVNRYAAEGTVKLLVGNKSDRTADRVVTTEQAQEFAAELGIPYIETSAKSAKNVEEAFLTMAGELIRQRVASGTDKDEKKG 192 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353190 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to top
BLAST of jgi.p|Trimin1|353190 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_14546 ID=mRNA_14546|Name=jgi.p|Trimin1|353190|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1573bp|location=Sequence derived from alignment at Contig_148:203583..211029- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGTGGCGCTTGCGTGCGTGTGCGCGGAGAGCGCCATGGTGGCGCTGTGback to top protein sequence of jgi.p|Trimin1|353190 >Trimin1|353190|estExt_Genemark1.C_Ctg_1480028 ID=Trimin1|353190|estExt_Genemark1.C_Ctg_1480028|Name=jgi.p|Trimin1|353190|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=379bp MVALACVCAESAMVALWRARLLLLVPGTAQAVLSAFDKQGAYTGMCILLQback to top mRNA from alignment at Contig_148:203583..211029- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_14546 ID=mRNA_14546|Name=jgi.p|Trimin1|353190|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=7447bp|location=Sequence derived from alignment at Contig_148:203583..211029- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_148:203583..211029- >mRNA_14546 ID=mRNA_14546|Name=jgi.p|Trimin1|353190|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1137bp|location=Sequence derived from alignment at Contig_148:203583..211029- (Tribonema minus UTEX_B_3156 )back to top |