mRNA_14524 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|353179 vs. uniprot
Match: A0A836CMW8_9STRA (ThiF domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMW8_9STRA) HSP 1 Score: 1159 bits (2997), Expect = 0.000e+0 Identity = 622/622 (100.00%), Postives = 622/622 (100.00%), Query Frame = 1
Query: 1 MLADETDYYALRFAGVAKLYGQEGLQRLRDAHVCVVGLGGVGSWSVEALARSGVGRLTLIDLDSICISNTNRQMHALTGTIGKSKAQVLQQRVLDINPDCDVDVRLDFVSPDTVGELLLVADADAAGGRTLGRYDCVLDAIDSMEDKCALLDACRRVRMPVVTVGAAGGRADPARVAVADLTRVDYDSLLFRVRKTLRQDFGFPRGTKRNIRGRKWGVAAVYSTEVPEAEALTASGEVGPRMGLGGCDGSFGTASFVTGVFGLMAAGVVAGLIAGAPATTHDVNDDDTDGAASGSEWRWTPHALRYLDRDPREVERRRLRVPGQQGGEGEGDEEDWQSVLDKARQKDWAAVEDLAVKYPDFLIPSYGIHPWWLREHLEEETRDAAAAAKEGGWQQRLVAQLERNRRAGVGECGLDRTRRKEVSLDEQEEAMMQHLEVAVRLQRHATLHCVGAFGRLLGALQRRPRSSSSGGGGGSGXXXXXXXXXXXXXXXXXXXXXARGSRTAARPPLILHSFNGDASMVPQLAAEGCYFSFSGRGINDARAAAAAAAGVQRCKQLELAVSVPLDRLLLESDAEGDPEARAVTDLVTTCAVIAERLGMTAEQLAATTTANARRAFQCEDEG 1866
MLADETDYYALRFAGVAKLYGQEGLQRLRDAHVCVVGLGGVGSWSVEALARSGVGRLTLIDLDSICISNTNRQMHALTGTIGKSKAQVLQQRVLDINPDCDVDVRLDFVSPDTVGELLLVADADAAGGRTLGRYDCVLDAIDSMEDKCALLDACRRVRMPVVTVGAAGGRADPARVAVADLTRVDYDSLLFRVRKTLRQDFGFPRGTKRNIRGRKWGVAAVYSTEVPEAEALTASGEVGPRMGLGGCDGSFGTASFVTGVFGLMAAGVVAGLIAGAPATTHDVNDDDTDGAASGSEWRWTPHALRYLDRDPREVERRRLRVPGQQGGEGEGDEEDWQSVLDKARQKDWAAVEDLAVKYPDFLIPSYGIHPWWLREHLEEETRDAAAAAKEGGWQQRLVAQLERNRRAGVGECGLDRTRRKEVSLDEQEEAMMQHLEVAVRLQRHATLHCVGAFGRLLGALQRRPRSSSSGGGGGSGXXXXXXXXXXXXXXXXXXXXXARGSRTAARPPLILHSFNGDASMVPQLAAEGCYFSFSGRGINDARAAAAAAAGVQRCKQLELAVSVPLDRLLLESDAEGDPEARAVTDLVTTCAVIAERLGMTAEQLAATTTANARRAFQCEDEG
Sbjct: 1 MLADETDYYALRFAGVAKLYGQEGLQRLRDAHVCVVGLGGVGSWSVEALARSGVGRLTLIDLDSICISNTNRQMHALTGTIGKSKAQVLQQRVLDINPDCDVDVRLDFVSPDTVGELLLVADADAAGGRTLGRYDCVLDAIDSMEDKCALLDACRRVRMPVVTVGAAGGRADPARVAVADLTRVDYDSLLFRVRKTLRQDFGFPRGTKRNIRGRKWGVAAVYSTEVPEAEALTASGEVGPRMGLGGCDGSFGTASFVTGVFGLMAAGVVAGLIAGAPATTHDVNDDDTDGAASGSEWRWTPHALRYLDRDPREVERRRLRVPGQQGGEGEGDEEDWQSVLDKARQKDWAAVEDLAVKYPDFLIPSYGIHPWWLREHLEEETRDAAAAAKEGGWQQRLVAQLERNRRAGVGECGLDRTRRKEVSLDEQEEAMMQHLEVAVRLQRHATLHCVGAFGRLLGALQRRPRSSSSGGGGGSGXXXXXXXXXXXXXXXXXXXXXARGSRTAARPPLILHSFNGDASMVPQLAAEGCYFSFSGRGINDARAAAAAAAGVQRCKQLELAVSVPLDRLLLESDAEGDPEARAVTDLVTTCAVIAERLGMTAEQLAATTTANARRAFQCEDEG 622
BLAST of jgi.p|Trimin1|353179 vs. uniprot
Match: A0A7S4PI85_GUITH (Hypothetical protein n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PI85_GUITH) HSP 1 Score: 238 bits (607), Expect = 9.800e-69 Identity = 129/268 (48.13%), Postives = 175/268 (65.30%), Query Frame = 1
Query: 4 LADETDYYALRFAGVAKLYGQEGLQRLRDAHVCVVGLGGVGSWSVEALARSGVGRLTLIDLDSICISNTNRQMHALTGTIGKSKAQVLQQRVLDINPDCDVDVRLDFVSPDTVGELLLVADADAA--GGRTLGRYDCVLDAIDSMEDKCALLDACRRVRMPVVTVGAAGGRADPARVAVADLTRVDYDSLLFRVRKTLRQDFGFPRGT---KRNI-RGRKWGVAAVYSTEVPEAEALTASGEVGPRMGLGGCDGSFGTASFVTGVFGL 789
+ D D RF+G+ +LYG L+RLR+AHVCVVGLGGVGSW E+ ARSG+G++TL+DLD +CISN NRQ+ AL T+G+ KA+VL+ R+LDINP+C+V L F+ + +L D D RT +D V+DAIDS++DK AL+ AC +++P++T G AGG DP + +LT+V+ D LLF VRK LRQ +GFP+G KRN+ R + W + AVYS+E P + E G CD S GT++ VTG FGL
Sbjct: 73 MEDFIDPAVERFSGIKRLYGSSSLERLRNAHVCVVGLGGVGSWVAESCARSGIGKITLVDLDEVCISNINRQLCALDSTVGRPKAEVLRARILDINPECNVSCVLQFLRRENALSILSGMDGDEGIEPQRTNCSFDFVVDAIDSVDDKAALISACTFLKVPIITSGGAGGLTDPTAIRSEELTKVEDDELLFHVRKKLRQFYGFPQGLPHRKRNVCRVKPWKIQAVYSSEKPIQTLV----EEAASQGFRSCDFSMGTSAMVTGSFGL 336
BLAST of jgi.p|Trimin1|353179 vs. uniprot
Match: A0A2E5TVI6_9BACT (tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A2E5TVI6_9BACT) HSP 1 Score: 233 bits (595), Expect = 1.400e-68 Identity = 133/272 (48.90%), Postives = 166/272 (61.03%), Query Frame = 1
Query: 19 DYYALRFAGVAKLYGQEGLQRLRDAHVCVVGLGGVGSWSVEALARSGVGRLTLIDLDSICISNTNRQMHALTGTIGKSKAQVLQQRVLDINPDCDVDVRLDFVSPDTVGELLLVADADAAGGRTLGRYDCVLDAIDSMEDKCALLDACRRVRMPVVTVGAAGGRADPARVAVADLTRVDYDSLLFRVRKTLRQDFGFPRGTKRNIRGRKWGVAAVYSTE---VPEAEALTASGEVGPRMGLGG----CDGSFGTASFVTGVFGLMAAGVVAG 813
D+Y RF G+A+LYG GL +LR AHV V+G+GGVGSW+ EALARSGVG +TL+DLD +C++NTNRQ+HAL G IGK+K L R+ INPDC V F + T E +L D ++DAID + +KC LLD CR+ ++PV+T GAAGGR D V + DLTR YD LLF+VRK LRQ GFPRGTK KW +A V+S E P+A+ + M G CD G A+ VTG FG AAG V G
Sbjct: 2 DHYNERFGGIARLYGTTGLAKLRTAHVAVIGVGGVGSWTAEALARSGVGNITLVDLDEVCVTNTNRQIHALDGAIGKTKVDELADRISQINPDCKVITHQKFFTEQTA-ESILKDD-----------LSYLVDAIDGLSNKCLLLDECRKRKIPVITCGAAGGRRDGTAVRITDLTRAKYDKLLFKVRKQLRQKHGFPRGTK------KWNLACVFSQEPVMYPQADGTVCEVK---SMEEGSVKLDCDRGLGAATQVTGAFGFAAAGYVVG 252
BLAST of jgi.p|Trimin1|353179 vs. uniprot
Match: A0A380U4J0_9PAST (UBA/THIF-type NAD/FAD binding protein n=2 Tax=Pasteurellaceae TaxID=712 RepID=A0A380U4J0_9PAST) HSP 1 Score: 232 bits (592), Expect = 3.860e-68 Identity = 123/264 (46.59%), Postives = 171/264 (64.77%), Query Frame = 1
Query: 4 LADETDYYALRFAGVAKLYGQEGLQRLRDAHVCVVGLGGVGSWSVEALARSGVGRLTLIDLDSICISNTNRQMHALTGTIGKSKAQVLQQRVLDINPDCDVDVRLDFVSPDTVGELLLVADADAAGGRTLGRYDCVLDAIDSMEDKCALLDACRRVRMPVVTVGAAGGRADPARVAVADLTRVDYDSLLFRVRKTLRQDFGFPRGTKRNIRGRKWGVAAVYSTEVPEAEALTASGEVGPRMGLGGCDGSFGTASFVTGVFGLMA 795
+A+ D + RF G+ +LY EGL RLR AHVCVVG+GGVGSW+VEALARSG+G++T+ID+D IC++N NRQ+HALTG IGK K +V++ R+ INP+CDV + DF+S D + E L G YD V+DAIDS++ K AL+ C+R ++ V++VG AGG+ DP ++ +ADLT+ D L+ +VR TLR+D+ F + KR K+GV V+ST+ +T E+ M C FG A+ VT FG A
Sbjct: 1 MAERIDNFEQRFGGIGRLYTPEGLARLRQAHVCVVGIGGVGSWAVEALARSGIGKITMIDMDDICVTNINRQIHALTGNIGKLKTEVMRDRITLINPECDVQIIDDFLSLDNLAEYLS------------GDYDYVIDAIDSVKTKAALIAYCKRNKIKVISVGGAGGQTDPTQIQIADLTKTIQDPLMSKVRSTLRKDYHFSQNPKR-----KFGVDCVFSTQPLIFPKMTEGCEISATMN---CANGFGAATMVTATFGFFA 244
BLAST of jgi.p|Trimin1|353179 vs. uniprot
Match: A0A0M0JNY5_9EUKA (ThiF domain-containing protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JNY5_9EUKA) HSP 1 Score: 244 bits (623), Expect = 5.700e-68 Identity = 244/704 (34.66%), Postives = 311/704 (44.18%), Query Frame = 1
Query: 10 DETDYYALRFAGVAKLYGQEGLQRLRDAHVCVVGLGGVGSWSVEALARSGVGRLTLIDLDSICISNTNRQMHALTGTIGKSKAQVLQQRVLDINPDCDVDVRLDFVSPDTVGELLL--VADADAAGGRTLGRYDCVLDAIDSMEDKCALLDACRRVRMPVVTVGAAGGRADPARVAVADLTRVDYDSLLFRVRKTLRQDFGFPRG---TKRNIRGR-KWGVAAVYSTEVPEAEALTASGEVGPRMGLGGCDGSFGTASFVTGVFGLMAAGVVAGLIA-GAP--------------------ATTHDV-NDDDT--------------------DGAASGSEWRWTPHALRYLDRDPREVERRRLRVPGQQGGEG-------EGDEEDWQS--VLDKARQKDWAAVEDLAVKYP-DFLIPSYGIHPW--WLREHLEEETRDAAAAAKE--------------------GGWQQRLVAQLERNRRAGVGECGLDRTRRKEVSLDEQEEAMMQHLEVAVRLQRHATLHCVGAFGRLLGALQRRPRSSSSGGGGGSGXXXXXXXXXXXXXXXXXXXXXARGSRTAARPPLILHSFNGDASMVPQLA------AEGC--YFSFSGRGINDARAAAAAAAGVQRCKQLELAVSVPLDRLLLESDAEGDPEARAVTDLVTTCAVIAERLGMTAEQLAATTTANARRAFQCE 1857
D TDYYALRF GV +LYG+ LR A V VVGLGGVGSW+VEALARSGVG L LID D ICISNTNRQ+HAL T+G+SKA+ L R+++INP+C V VR ++V+ +L A+A +AGG TL VLDAID +K A++ A + + +V VGA GG+ADP + VADL V D LL VR+ LR+ +G+P G + R RG+ ++GV V+S E A GLG FGTA F TG FG AA + ++A G P A+ D+ N+ + +G G+E T A + P E +P GGE EG S + D A LA P + S G W L+ + AAA E GW +RL A L R A VGE GLDR R + S D Q A L +A L+R +HCV A G LL L+ ++SS P L++H+F G LA + C +F FS R + RAAA A SVP D LLLESD A A L CA +A G + AA T ANAR+AF +
Sbjct: 30 DTTDYYALRFDGVRRLYGKAAPSNLRSARVVVVGLGGVGSWAVEALARSGVGTLVLIDPDEICISNTNRQLHALKSTVGRSKARELAARIIEINPECAVHVREEWVTEANAHGMLQHEAAEAHSAGG-TLA----VLDAIDEHREKAAMVRAAHALGVHLVCVGATGGKADPTAIRVADLYNVTDDLLLKNVRRHLRKAYGYPEGVAGSPRRRRGKQRFGVQCVHSLEPVRTIA----------SGLGTQCDRFGTACFGTGAFGFAAAAAITEVLARGEPTPERPPLXXXXXXXXXPEAGASILDLWNESEXXXXXXXXXXXXXXXXGEGVGEGGGMGAEPTVTSEA-QAAQTQPGESASSSSHLPADAGGEAAATPTIREGPSTSASSWAIFDSHTHAIGEARALLAGPAPAGVCLMSVGEAEWPAMLQAAADAAALQPTAAAAEVTGTTRVAMGVHPWYVDAQTDGWPERLRASLLREPGAVVGEAGLDRARL-DSSWDAQLVAFRTQLRLAAELRRALVVHCVRADGALLDLLRAEAAAASS-----------------------------------LPPVLVMHAFGGSVETAATLARLSASASRTCRIFFGFSARAVRLRRAAAVIA-------------SVPADALLLESDEHTADGAAAA--LAEACARVAHARGWSEADAAARTAANARQAFNVD 666
BLAST of jgi.p|Trimin1|353179 vs. uniprot
Match: A0A3T0VRA9_9GAMM (tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA n=4 Tax=Hahella TaxID=158481 RepID=A0A3T0VRA9_9GAMM) HSP 1 Score: 231 bits (590), Expect = 9.780e-68 Identity = 123/261 (47.13%), Postives = 168/261 (64.37%), Query Frame = 1
Query: 25 YALRFAGVAKLYGQEGLQRLRDAHVCVVGLGGVGSWSVEALARSGVGRLTLIDLDSICISNTNRQMHALTGTIGKSKAQVLQQRVLDINPDCDVDVRLDFVSPDTVGELLLVADADAAGGRTLGRYDCVLDAIDSMEDKCALLDACRRVRMPVVTVGAAGGRADPARVAVADLTRVDYDSLLFRVRKTLRQDFGFPRGTKRNIRGRKWGVAAVYSTE---VPEAEALTASGEVGPRMGLG-GCDGSFGTASFVTGVFGLMA 795
Y+ RF G+A+LYGQ L+R R+AHVCV+G+GGVGSW+ EALARSGVG +TLID+D IC+SNTNRQ+HAL T+G++K +V+ +R+ INP+CDV FV+ V E+L D YD ++DAIDS+ KCA++ CRR ++ +VTVG AGG+ DP R+ DL+R +D LL + RK LRQ++ FP +R ++GV AV+STE P+AE + G C FG A+ VT FG +A
Sbjct: 6 YSFRFGGIARLYGQRALERFRNAHVCVIGIGGVGSWAAEALARSGVGTITLIDMDDICVSNTNRQIHALQNTVGRNKIEVMAERIKAINPECDVRTEFKFVTEKNVAEML-----DRG-------YDFIIDAIDSVRHKCAIIAYCRRNKIKIVTVGGAGGQTDPTRIEACDLSRTYHDPLLAKTRKRLRQEYNFPDNPQR-----RFGVEAVFSTEQQVYPDAEGEVCQSKPGNMESTRLDCASGFGAATAVTATFGFIA 249
BLAST of jgi.p|Trimin1|353179 vs. uniprot
Match: A0A8J5X8I8_DIALT (ThiF domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X8I8_DIALT) HSP 1 Score: 233 bits (593), Expect = 1.130e-67 Identity = 126/267 (47.19%), Postives = 175/267 (65.54%), Query Frame = 1
Query: 25 YALRFAGVAKLYGQEGLQRLRDAHVCVVGLGGVGSWSVEALARSGVGRLTLIDLDSICISNTNRQMHALTGTIGKSKAQVLQQRVLDINPDCDVDVRLDFVSPDTVGELLLVADADAAGGRTLGRYDCVLDAIDSMEDKCALLDACRRVRMPVVTVGAAGGRADPARVAVADLTRVDYDSLLFRVRKTLRQDFGFPRGTK-RNIRGRKWGVAAVYSTEVPEAEALTASGEVGPRMGLGGCDGSFGTASFVTGVFGLMAAGVVAGLIA 822
Y+LRF GV+ LYG+ L+ R +HV +VG+GGVGSW+ EA+AR+GVG +T++DLD +CISNTNRQ+H+L T+G +KA VL++R+ +INP+C V F++PD V L ADAA + V+DA+D ++DK AL+DAC R+ +P+VTVGAAGG+ DP D++RV DSL+ VR+ LR ++ +P T+ R RG +WG+ AV S PE + P CD FGTA+ VTG G AA VVAG++A
Sbjct: 21 YSLRFRGVSALYGERALESFRASHVAIVGIGGVGSWAAEAIARTGVGAITVVDLDEVCISNTNRQLHSLVSTVGHAKADVLERRIREINPECAVRADKRFITPDNVHAFL----ADAAPA-----FSAVIDAVDGVQDKAALIDACVRLDVPIVTVGAAGGKLDPTTTRAVDISRVHGDSLMQSVRRLLRSEYAYPPETRGRAFRGSEWGIIAVSS---PELAPRRSKAPTAPS-----CD-QFGTATHVTGTLGFAAAAVVAGVLA 269
BLAST of jgi.p|Trimin1|353179 vs. uniprot
Match: A0A6I1K9H6_9BACT (UBA/THIF-type NAD/FAD binding protein n=1 Tax=Verrucomicrobia subdivision 3 bacterium TaxID=2052186 RepID=A0A6I1K9H6_9BACT) HSP 1 Score: 231 bits (588), Expect = 1.400e-67 Identity = 134/268 (50.00%), Postives = 170/268 (63.43%), Query Frame = 1
Query: 34 RFAGVAKLYGQEGLQRLRDAHVCVVGLGGVGSWSVEALARSGVGRLTLIDLDSICISNTNRQMHALTGTIGKSKAQVLQQRVLDINPDCDVDVRLDFVSPDTVGELLLVADADAAGGRTLGRYDCVLDAIDSMEDKCALLDACRRVRMPVVTVGAAGGRADPARVAVADLTRVDYDSLLFRVRKTLRQDFGFPRGTKRNIRGRKWGVAAVYSTEVP----EAEALTASGEV-GPRMGLGGCDGSFGTASFVTGVFGLMAAGVVAGLIA 822
RF G+A+L G GLQRLR AHVCVVG+GGVGSW+VEALARSGVG LTLIDLD +C++N NRQ+HAL GT+G++K V+ +RV INP+C V +F + LL + V+DAIDS+ +KC LL CR ++PV++ GAAGGR D V VADL V +D LL VRK LR++ GFP G++ GV AV+S E P A+ +A GE PR+ C+ +G+ASFVTG FG AAG VA IA
Sbjct: 5 RFGGIARLVGAHGLQRLRAAHVCVVGIGGVGSWTVEALARSGVGALTLIDLDEVCVTNINRQIHALDGTVGRAKVDVMAERVRLINPECRVTAVAEFFTEANAARLLAP------------NFGFVVDAIDSVSNKCRLLALCRERKLPVISCGAAGGRLDATAVRVADLANVTHDRLLAEVRKRLRKEHGFP------ATGKQLGVTAVFSPEAPIAPAPADCASAVGEPDSPRLN---CEWGYGSASFVTGTFGFAAAGWVARRIA 251
BLAST of jgi.p|Trimin1|353179 vs. uniprot
Match: UPI00114CE4ED (tRNA threonylcarbamoyladenosine dehydratase n=1 Tax=Oligoflexus tunisiensis TaxID=708132 RepID=UPI00114CE4ED) HSP 1 Score: 230 bits (587), Expect = 2.290e-67 Identity = 129/276 (46.74%), Postives = 175/276 (63.41%), Query Frame = 1
Query: 19 DYYALRFAGVAKLYGQEGLQRLRDAHVCVVGLGGVGSWSVEALARSGVGRLTLIDLDSICISNTNRQMHALTGTIGKSKAQVLQQRVLDINPDCDVDVRLDFVSPDTVGELLLVADADAAGGRTLGRYDCVLDAIDSMEDKCALLDACRRVRMPVVTVGAAGGRADPARVAVADLTRVDYDSLLFRVRKTLRQDFGFPRGTKRNIRGRKWGVAAVYSTEVP---EAEALTASGEVGPRMGLGGCDGSFGTASFVTGVFGLMAAGVVAGLIAGAPAT 837
D + RF G+A+LYG+ L+R R AHV VVG+GGVGSW+ EALAR+GVGRLTLIDLD +CISNTNRQ+H LT TIG+SK QV+ +R+ INP+ DV DF + T +LL YD ++DAIDS+++KC L+ C+++R+P+VTVG AGGR +P ++ VADL D LL +VR+ LRQ++ FP+ + + AV+STE P E + + G GGC+ +G ASFVTG FG AA V+ + PA+
Sbjct: 2 DAFQQRFNGIARLYGEVALERFRQAHVAVVGVGGVGSWAAEALARTGVGRLTLIDLDEVCISNTNRQLHTLTPTIGRSKVQVMAERLRSINPELDVHAVDDFFTSSTATQLLNQG------------YDGLVDAIDSLKNKCLLIARCQQLRIPLVTVGGAGGRRNPTKIQVADLAATSNDGLLRQVRRELRQEYKFPKDGP-------FQIPAVFSTEAPVFPTPEGGICNKPQPGQSGKGGCEQGYGAASFVTGTFGFAAASVMLDELLRTPAS 258
BLAST of jgi.p|Trimin1|353179 vs. uniprot
Match: A0A1Y5D676_9GAMM (tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA n=1 Tax=Colwellia sp. 39_35_sub15_T18 TaxID=1856279 RepID=A0A1Y5D676_9GAMM) HSP 1 Score: 228 bits (582), Expect = 2.040e-66 Identity = 120/269 (44.61%), Postives = 176/269 (65.43%), Query Frame = 1
Query: 25 YALRFAGVAKLYGQEGLQRLRDAHVCVVGLGGVGSWSVEALARSGVGRLTLIDLDSICISNTNRQMHALTGTIGKSKAQVLQQRVLDINPDCDVDVRLDFVSPDTVGELLLVADADAAGGRTLGRYDCVLDAIDSMEDKCALLDACRRVRMPVVTVGAAGGRADPARVAVADLTRVDYDSLLFRVRKTLRQDFGFPRGTKRNIRGRKWGVAAVYSTEVPEAEALTASGEV---GPRMGLGG-------CDGSFGTASFVTGVFGLMAAG 801
Y+LRF G+A+LYGQ G Q L+++H CV+G+GGVGSW EALAR+G+G+LTLIDLD IC++N NRQ+HAL+ TIG SK +V+ +R+ INPDC V+V DFV+ + + EL+ + + +YD V+DAID+++ K L+ C+R +MP++T+G AGG+ DP+++A+ DL++ D LL +V+ LR++F FPR RK+ + AV+STE + A+G+V P + GG C G FG + VT F A G
Sbjct: 4 YSLRFGGIARLYGQHGAQTLKNSHFCVIGIGGVGSWVAEALARNGIGQLTLIDLDDICMTNINRQIHALSSTIGMSKVEVMCERIKQINPDCQVNVIEDFVTVENLTELMSAKNMPS-------QYDYVIDAIDAVDIKVRLIAFCKRNKMPIITIGGAGGQVDPSQIAITDLSKTYQDPLLAKVKNQLRREFNFPRADLAKASKRKFAIDAVFSTE--QLRYPDAAGDVCLAKPDVNEGGSSATRLDCSGGFGATTHVTATFAFFAVG 263 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353179 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_14524 ID=mRNA_14524|Name=jgi.p|Trimin1|353179|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1980bp|location=Sequence derived from alignment at Contig_148:26257..34272- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGCTTGCGGATGAGACAGACTACTACGCCCTACGCTTTGCTGGAGTGGCback to top protein sequence of jgi.p|Trimin1|353179 >Trimin1|353179|estExt_Genemark1.C_Ctg_1480006 ID=Trimin1|353179|estExt_Genemark1.C_Ctg_1480006|Name=jgi.p|Trimin1|353179|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=623bp MLADETDYYALRFAGVAKLYGQEGLQRLRDAHVCVVGLGGVGSWSVEALAback to top mRNA from alignment at Contig_148:26257..34272- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_14524 ID=mRNA_14524|Name=jgi.p|Trimin1|353179|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=8016bp|location=Sequence derived from alignment at Contig_148:26257..34272- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_148:26257..34272- >mRNA_14524 ID=mRNA_14524|Name=jgi.p|Trimin1|353179|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1869bp|location=Sequence derived from alignment at Contig_148:26257..34272- (Tribonema minus UTEX_B_3156 )back to top |